Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0005552

Physical Location & Seq

Genomic Coordinates Forward (+)

37731590 .. 37736280

Gene Structure 4691 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G445700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3270 bp

ATGAGCAAATCCCAGAAAAGAAAGCGCAACAAGTTGGAGGTTGAATCCAAATATTCAAAACGCAGGAAAGCTTTACAATTCCCAAAAGCTGGATTTAACAAGAATAATGGAGACTGTGCTTGTAATGATCAAACTGAGCCTGATCATCAGTTAGAAAAAACTCAATCAAGGCAGGATTTGGATGAGATTCATGAGGACAAAGTAAAAGAGAGCACAAAAGTAAATTCCAGCAGCAGAGCAAGTGAATTATCAGAATTTCCTGCAGCAAGGCCTCTACTTGCACCAACCATAGTGCATGTATCAAGGCCTGATGAAGTTGAAGAAGCAAGGAAGGATCTTCCAATAGTAATGATGGAGCAGGAGATCATGGAGGCCATTAATGAAAATTCCACTGTGATTATACGTGGAGAGACTGGATGTGGTAAAACAACCCAAGTTCCTCAGTTTCTTTTTGAAGCTGGCTATGGTTCAAGCCACTCTAATTCTGCCCAAAGTGGTATTATTGGTGTAACTCAACCCCGCCGTGTTGCAGTCTATGCGACGGCTGAGCGAGTGGCGTATGAGCTTGGACTGAATTTAGGTAAAGAGGTCGGCTTTCAAGTTAGGCATGACAAAAGAATGAGTAAAAGTAGTTGCTCCATCAAATTCATGACAGACGGAATATTACTACAAGAACTCAAGAGTGATTTTTTGTTGAAGCAATACTCTGTCATAATTCTTGATGAAGTACATGTGCGGAGCTCGAACACCGACATACTTATCGGAATGCTTTCACGTGTTATTGTACAGCGTCAGAAAGAATATGAAAACCAGCAAAAGGCGGTGCTTTTGGGGAAAAACGTAAGTCGTGAACAACAGATTTTCCCTTTAAAGCTTGTGCTGATGAGTGCTACCTTGCGAGAAGACTTTATCAGAAAGCTTTTTGGTGAGCCCCCGATCATAGAAGTCCCCACTAGACAATTTTCAGTAAAAGCTTACTACGAAAACAGAACCGAGGAAGAAGGGGATTATGTTGAGAAAGCATGTAAAAAAGTCTTGAAGATTCACAAGAGACTGCCACTTGGGGGCATACTTGTGTTTGTCACTGGGAAGCGAGAAGTAGAGCGCTTGTGTCGAAAGCTACAAGGAGCTTCAAGGGAACTTATGAAAAGATCAGTTGAGAGTGATACTGATGAAGTTTCTGATATTGATTCTGTTGAGGATGAGTTGGAGGGTTATTCATATGATTCAGAAACAGAAAGTGAACAAGAATTTTTTCGCGATGACGATAGGGATTCATTGTGCCAAGATACCCCAGGATTAGTTGATGGAACTGTGGCAGAGGTTGTAGGAGAGGATGGTAGCATTGTATCACCGAAAGCTGGTTTCGATTCTTGGGCTGGAAAATCTTCATTATGCTGCAATTCAGCTGGGAAAAAGGGTACTTTTCCAGGCGCACTGCATGTTGTCCCTCTTTATGCCAGACTGAATGCAGAAGCTCAACTTACGGAAATAGAAAAAGTGAAGGAGGGAGGTCGGCTTGTTGTTGTAGCCACAAATGTGGCTGAAACCTCTTTAACTATAAGCAGGATAAAGTATGTTGTTGATACTGGGAAAGAGAAAGTGAAGGACTACAATTCAAATGGCATGGAAACATATAAAATACAGTGGATTAGCAAGGCATCAGCTGATCAGCGTAAAGGAAGAGCTGGAAGAACAGGACCTGGCCACTGTTACCGCCTGTATTCTCAAGCAGTGTATTATAACAAATTCCCTGATTTTTCCGCACCCGAAATATCCAAAGTCCCCTTTGATGGTGTTGCCCTTCTTCTGAAGTCTATGAATATTCTTAAGATATCCAATTTTCCATTTCCAACTCCTCCAGAGGCTGGTGCTGTGGATGAAGCAGAGCGTCTCTTGGCGGTCCTTGAAGCAAGTGACACAAATGGAAGATTAACGCCTTTAGGGCATTCCATGGCTTGTTATCCCCTGCGTCCTCGTCACTCTCGGATGCTCCTTACGATTTTTCAAATCATGAGTAAACAGAAAAATCGTGCTCGAGCTAATTTGGTGTTAGCATATGCAGTTGCAGCAGTTGCATCTCTGAGTTGTTCAAATCCTTTTCTCAGGCAGTTTGAAGATATTCACACTACAAACCATGACAATGTTTGCAGCGATGCGCCTTTCGAGCATTCAAATCAAGAGAAGTTGACAAAGAAGAAACTAAAAGAAACTCTAAAAGTGCCTCGTGAAAGGTTTTTCAATCCCAGCAGTGATGCTCTGTCCAGAGCTTATGCTTTGCAGTGCTATGAAATATCTAAGAGGCCAGTGGAATTCTGCAATGACAATGCTCTGCACCCGAAAACCATGGAGGAAATATCCAAGCTGAGAAAGCAGCTCTTCGAACGTGTCTTTGAACAAAGTGGCGTTTCTGGTGGGGAGAAAGAATTTTCATGGATCTATGGTAGCATGGAAGATGTAGAACGTGATTGGAGGGTTTCCTATGACAAGAACCCTCTTTCGATGTATGAGGAAGAGCTCTTGGGCCAAGCCATCTGTGCTGGTTGGGCAGACAGGGTTGCTAAGCGCATTAGAGGAAGGAGTTCATCAGTGTCATCTGATTTAGGAGATGGAAAAGTTCGTGCCGTTCGATATCAAGCCTGCATGGTTAAAGAGACTGTGTTCCTCGACCCTTGGTCATCTGTTTCTAATTCAGCCCCTGAATTTCTGGTATACAATGAGCTAATCCAGACAAGATCAGGACCGTACATGTACGGCGTTACTCGTGTAAAATCAGAATGGCTTGTTGAGCATGCCCGGGCTTTATGCACTTTCTCTGCACCCCCAACAGATACCAAACCTTACTACGAGCCTCTAACTGATCAAGTATTTAGTTATGTCATTCCAGCCTTCGGTTCTCATTTGTGGGAGCTTCCACCATTTGGTTTGCCAATGAATAAACTTGATCAGTTTCCAGATCGAGTGAAAGCTTTTGCTTATGCTTTGCTTCAAGGCCAGGTTTTGCCTTGCTTAAAAGTTGTTCGTAAGTGTATGGCAGAACCTCCTGGTAATGTTTTAAAGCCGGAAGCAGCTGGTCGACGGCGGGTTGGGAATCTTTTAGAGAAGCTGATGAGAAACAAGATTCATAACTGCGCTGCGTTAAGACAGGTGTGGAAGGAGAATCGCATGGAGTTGCATCCAGAATTCCTGGCCTGGTTTAATAAGAGTTTCCAAACTAGCAGCTTTGAAGCCCTTTGGTCACTCATGCTTCGTGAAGTTGCTTTAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

1090

Amino Acids

122.96

Weight (kDa)

8.25

Isoelectric Point (pI)

45.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005552)

Species	Orthologous Gene IDs
prunus_persica	Prupe.1G445700_v2.0.a1 Prupe.1G445700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0386401 RchiOBHm_Chr4g0386411 RchiOBHm_Chr4g0386421
rosa_laevigata	RLG00000010164
rosa_multiflora	Rmu_sc0000472.1_g000003 Rmu_sc0001942.1_g000001
rosa_roxburghii	Rroxscaffold_5G00333900 Rroxscaffold_5G00333930
rosa_rugosa	Rorug03G0306700 Rorug03G0306800 Rorug03G0306900
rosa_samantha	Rh4AG011200 Rh4AG011300 Rh4AG011400 Rh4BG008800 Rh4BG008900 Rh4CG013400 Rh4CG013500 Rh4CG013600 Rh4CG013700 Rh4CG013800 Rh4CG013900 Rh4CG014000 Rh4DG009400 Rh4DG009600 Rh4DG009700
rosa_wichuraiana	Rw4G000060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1743
AccB7I	CCANNNNNTGG	3 cut(s)	89, 1868, 2921
AccI	GTMKAC	2 cut(s)	2712, 3076
AccII	CGCG	1 cut(s)	1260
AciI	CCGC	7 cut(s)	520, 736, 821, 1717, 1764, 1901, 3082
AclWI	GGATC	2 cut(s)	342, 2444
AcoI	YGGCCR	1 cut(s)	1705
AcuI	CTGAAG	1 cut(s)	1832
AcvI	CACGTG	1 cut(s)	776
AfaI	GTAC	5 cut(s)	729, 786, 1423, 2747, 2753
AfeI	AGCGCT	1 cut(s)	1106
AfiI	CCNNNNNNNGG	8 cut(s)	89, 817, 1064, 1361, 1793, 1868, 2891, 2921
AflII	CTTAAG	1 cut(s)	1829
AflIII	ACRYGT	4 cut(s)	730, 775, 2386, 2748
AhdI	GACNNNNNGTC	1 cut(s)	2674
AjnI	CCWGG	7 cut(s)	1294, 1429, 1702, 2994, 3043, 3186, 3191
AleI	CACNNNNGTG	1 cut(s)	1538
Alw21I	GWGCWC	4 cut(s)	215, 743, 2038, 2520
Alw26I	GTCTC	5 cut(s)	105, 404, 1045, 1898, 2648
AlwI	GGATC	2 cut(s)	342, 2444
AlwNI	CAGNNNCTG	3 cut(s)	1703, 1868, 2699
Ama87I	CYCGRG	2 cut(s)	2037, 2796
Aor51HI	AGCGCT	1 cut(s)	1106
AoxI	GGCC	8 cut(s)	269, 305, 372, 1705, 2303, 2524, 2992, 3189
ApeKI	GCWGC	9 cut(s)	231, 263, 1398, 2069, 2151, 2374, 3068, 3134, 3219
AseI	ATTAAT	1 cut(s)	378
Asp700I	GAANNNNTTC	5 cut(s)	769, 1254, 1387, 2121, 2581
AspLEI	GCGC	6 cut(s)	27, 1107, 1436, 2161, 2568, 3134
AspS9I	GGNCC	4 cut(s)	1700, 1903, 2524, 2741
AsuC2I	CCSGG	2 cut(s)	2797, 2798
AsuHPI	GGTGA	2 cut(s)	938, 1344
AsuII	TTCGAA	1 cut(s)	2382
AvaI	CYCGRG	2 cut(s)	2037, 2796
AvaII	GGWCC	3 cut(s)	1700, 1903, 2741
BalI	TGGCCA	1 cut(s)	1707
BanII	GRGCYC	3 cut(s)	743, 933, 2520
BauI	CACGAG	2 cut(s)	2226, 2763
BbrPI	CACGTG	1 cut(s)	776
BbsI	GAAGAC	1 cut(s)	909
Bbv12I	GWGCWC	4 cut(s)	215, 743, 2038, 2520
BbvI	GCAGC	9 cut(s)	243, 275, 1385, 2081, 2163, 2386, 3080, 3121, 3231
BccI	CCATC	7 cut(s)	346, 647, 1301, 1331, 1787, 2540, 2603
BceAI	ACGGC	5 cut(s)	507, 558, 2609, 2770, 3095
BciT130I	CCWGG	7 cut(s)	1296, 1431, 1704, 2996, 3045, 3188, 3193
BclI	TGATCA	5 cut(s)	127, 142, 1669, 2860, 2944
BcnI	CCSGG	2 cut(s)	2797, 2798
BcoDI	GTCTC	5 cut(s)	105, 404, 1045, 1898, 2648
BfaI	CTAG	2 cut(s)	954, 3216
BfmI	CTRYAG	1 cut(s)	261
BfoI	RGCGCY	1 cut(s)	1108
BfrI	CTTAAG	1 cut(s)	1829
BglI	GCCNNNNNGGC	1 cut(s)	1945
BisI	GCNGC	9 cut(s)	232, 264, 1399, 2070, 2152, 2375, 3069, 3135, 3220
BlpI	GCTNAGC	2 cut(s)	546, 2562
BlsI	GCNGC	9 cut(s)	233, 265, 1400, 2071, 2153, 2376, 3070, 3136, 3221
Bme1390I	CCNGG	9 cut(s)	1296, 1431, 1704, 2797, 2798, 2996, 3045, 3188, 3193
Bme18I	GGWCC	3 cut(s)	1700, 1903, 2741
BmeRI	GACNNNNNGTC	1 cut(s)	2674
BmeT110I	CYCGRG	2 cut(s)	2037, 2796
BmgT120I	GGNCC	4 cut(s)	1700, 1903, 2524, 2741
BmrFI	CCNGG	9 cut(s)	1296, 1431, 1704, 2797, 2798, 2996, 3045, 3188, 3193
BmrI	ACTGGG	2 cut(s)	1095, 1599
BmsI	GCATC	6 cut(s)	1670, 1980, 2087, 2146, 2245, 3184
BmuI	ACTGGG	2 cut(s)	1095, 1599
BpiI	GAAGAC	1 cut(s)	909
BpmI	CTGGAG	1 cut(s)	1845
Bpu1102I	GCTNAGC	2 cut(s)	546, 2562
Bpu14I	TTCGAA	1 cut(s)	2382
BpuEI	CTTGAG	2 cut(s)	662, 1713
BpuMI	CCSGG	2 cut(s)	2797, 2798
BsaAI	YACGTR	2 cut(s)	404, 776
BsaJI	CCNNGG	6 cut(s)	993, 1294, 1953, 2346, 2672, 2796
Bsc4I	CCNNNNNNNGG	8 cut(s)	89, 817, 1064, 1361, 1793, 1868, 2891, 2921
Bse1I	ACTGG	4 cut(s)	418, 1090, 1594, 2306
Bse3DI	GCAATG	1 cut(s)	2326
BseBI	CCWGG	7 cut(s)	1296, 1431, 1704, 2996, 3045, 3188, 3193
BseDI	CCNNGG	6 cut(s)	993, 1294, 1953, 2346, 2672, 2796
BseGI	GGATG	7 cut(s)	187, 422, 1207, 1342, 1885, 1995, 3175
BseLI	CCNNNNNNNGG	8 cut(s)	89, 817, 1064, 1361, 1793, 1868, 2891, 2921
BseMI	GCAATG	1 cut(s)	2326
BseMII	CTCAG	6 cut(s)	126, 455, 537, 2075, 2119, 2357
BseNI	ACTGG	4 cut(s)	418, 1090, 1594, 2306
BseRI	GAGGAG	1 cut(s)	1848
BseXI	GCAGC	9 cut(s)	243, 275, 1385, 2081, 2163, 2386, 3080, 3121, 3231
BseYI	CCCAGC	2 cut(s)	1409, 2246
BsgI	GTGCAG	2 cut(s)	2318, 2802
Bsh1236I	CGCG	1 cut(s)	1260
BshFI	GGCC	8 cut(s)	271, 307, 374, 1707, 2305, 2526, 2994, 3191
BsiHKAI	GWGCWC	4 cut(s)	215, 743, 2038, 2520
BsiHKCI	CYCGRG	2 cut(s)	2037, 2796
BsiSI	CCGG	2 cut(s)	2797, 3062
BslFI	GGGAC	3 cut(s)	932, 1433, 1769
BslI	CCNNNNNNNGG	8 cut(s)	89, 817, 1064, 1361, 1793, 1868, 2891, 2921
BsmAI	GTCTC	5 cut(s)	105, 404, 1045, 1898, 2648
BsmBI	CGTCTC	1 cut(s)	1898
BsmFI	GGGAC	3 cut(s)	932, 1433, 1769
BsmI	GAATGC	4 cut(s)	771, 1474, 1948, 2170
BsnI	GGCC	8 cut(s)	271, 307, 374, 1707, 2305, 2526, 2994, 3191
BsoBI	CYCGRG	2 cut(s)	2037, 2796
Bsp119I	TTCGAA	1 cut(s)	2382
Bsp1286I	GDGCHC	5 cut(s)	215, 743, 933, 2038, 2520
Bsp1407I	TGTACA	1 cut(s)	784
Bsp1720I	GCTNAGC	2 cut(s)	546, 2562
Bsp19I	CCATGG	2 cut(s)	1953, 2346
Bsp68I	TCGCGA	1 cut(s)	1260
BspACI	CCGC	7 cut(s)	520, 736, 821, 1717, 1764, 1901, 3082
BspANI	GGCC	8 cut(s)	271, 307, 374, 1707, 2305, 2526, 2994, 3191
BspCNI	CTCAG	6 cut(s)	127, 454, 538, 2076, 2118, 2358
BspFNI	CGCG	1 cut(s)	1260
BspHI	TCATGA	3 cut(s)	190, 648, 2013
BspMAI	CTGCAG	1 cut(s)	265
BspPI	GGATC	2 cut(s)	342, 2444
BspQI	GCTCTTC	3 cut(s)	1678, 2384, 2508
BspT104I	TTCGAA	1 cut(s)	2382
BspTI	CTTAAG	1 cut(s)	1829
BsrDI	GCAATG	1 cut(s)	2326
BsrGI	TGTACA	1 cut(s)	784
BsrI	ACTGG	4 cut(s)	418, 1090, 1594, 2306
BssECI	CCNNGG	6 cut(s)	993, 1294, 1953, 2346, 2672, 2796
BssNAI	GTATAC	1 cut(s)	2713
BssSI	CACGAG	2 cut(s)	2226, 2763
BssT1I	CCWWGG	3 cut(s)	1953, 2346, 2672
Bst1107I	GTATAC	1 cut(s)	2713
Bst2BI	CACGAG	2 cut(s)	2226, 2763
Bst2UI	CCWGG	7 cut(s)	1296, 1431, 1704, 2996, 3045, 3188, 3193
Bst4CI	ACNGT	7 cut(s)	116, 394, 1315, 1647, 1712, 2659, 2745
Bst6I	CTCTTC	3 cut(s)	1678, 2384, 2508
BstAFI	CTTAAG	1 cut(s)	1829
BstAPI	GCANNNNNTGC	2 cut(s)	536, 2075
BstAUI	TGTACA	1 cut(s)	784
BstBAI	YACGTR	2 cut(s)	404, 776
BstBI	TTCGAA	1 cut(s)	2382
BstC8I	GCNNGC	3 cut(s)	460, 2641, 2793
BstDEI	CTNAG	8 cut(s)	135, 441, 546, 2084, 2105, 2298, 2366, 2562
BstDSI	CCRYGG	2 cut(s)	1953, 2346
BstF5I	GGATG	7 cut(s)	187, 422, 1207, 1342, 1885, 1995, 3175
BstFNI	CGCG	1 cut(s)	1260
BstH2I	RGCGCY	1 cut(s)	1108
BstHHI	GCGC	6 cut(s)	27, 1107, 1436, 2161, 2568, 3134
BstMAI	GTCTC	5 cut(s)	105, 404, 1045, 1898, 2648
BstMWI	GCNNNNNNNGC	9 cut(s)	536, 1945, 2069, 2075, 2167, 2371, 2537, 2546, 2788
BstNI	CCWGG	7 cut(s)	1296, 1431, 1704, 2996, 3045, 3188, 3193
BstNSI	RCATGY	6 cut(s)	299, 734, 1026, 1445, 2752, 2795
BstSCI	CCNGG	9 cut(s)	1294, 1429, 1702, 2795, 2796, 2994, 3043, 3186, 3191
BstSFI	CTRYAG	1 cut(s)	261
BstUI	CGCG	1 cut(s)	1260
BstV1I	GCAGC	9 cut(s)	243, 275, 1385, 2081, 2163, 2386, 3080, 3121, 3231
BstV2I	GAAGAC	1 cut(s)	909
BstX2I	RGATCY	2 cut(s)	334, 2436
BstXI	CCANNNNNNTGG	1 cut(s)	1540
BstYI	RGATCY	2 cut(s)	334, 2436
BstZ17I	GTATAC	1 cut(s)	2713
BsuRI	GGCC	8 cut(s)	271, 307, 374, 1707, 2305, 2526, 2994, 3191
BtgI	CCRYGG	2 cut(s)	1953, 2346
BtgZI	GCGATG	2 cut(s)	1275, 2169
BtsCI	GGATG	7 cut(s)	187, 422, 1207, 1342, 1885, 1995, 3175
BtsI	GCAGTG	4 cut(s)	1436, 1740, 2257, 2288
BtuMI	TCGCGA	1 cut(s)	1260
Cac8I	GCNNGC	3 cut(s)	460, 2641, 2793
CaiI	CAGNNNCTG	3 cut(s)	1703, 1868, 2699
CciI	TCATGA	3 cut(s)	190, 648, 2013
CfoI	GCGC	6 cut(s)	27, 1107, 1436, 2161, 2568, 3134
Cfr13I	GGNCC	4 cut(s)	1700, 1903, 2524, 2741
Cfr9I	CCCGGG	1 cut(s)	2796
CseI	GACGC	3 cut(s)	779, 1880, 1961
Csp6I	GTAC	5 cut(s)	728, 785, 1422, 2746, 2752
CviQI	GTAC	5 cut(s)	728, 785, 1422, 2746, 2752
DdeI	CTNAG	8 cut(s)	135, 441, 546, 2084, 2105, 2298, 2366, 2562
DraI	TTTAAA	2 cut(s)	870, 3057
DriI	GACNNNNNGTC	1 cut(s)	2674
EaeI	YGGCCR	1 cut(s)	1705
Eam1104I	CTCTTC	3 cut(s)	1678, 2384, 2508
Eam1105I	GACNNNNNGTC	1 cut(s)	2674
EarI	CTCTTC	3 cut(s)	1678, 2384, 2508
Ecl136II	GAGCTC	2 cut(s)	741, 2518
Eco130I	CCWWGG	3 cut(s)	1953, 2346, 2672
Eco147I	AGGCCT	2 cut(s)	271, 307
Eco24I	GRGCYC	3 cut(s)	743, 933, 2520
Eco32I	GATATC	2 cut(s)	1836, 2633
Eco47I	GGWCC	3 cut(s)	1700, 1903, 2741
Eco47III	AGCGCT	1 cut(s)	1106
Eco53kI	GAGCTC	2 cut(s)	741, 2518
Eco57I	CTGAAG	1 cut(s)	1832
Eco72I	CACGTG	1 cut(s)	776
Eco88I	CYCGRG	2 cut(s)	2037, 2796
EcoICRI	GAGCTC	2 cut(s)	741, 2518
EcoO109I	RGGNCCY	1 cut(s)	1700
EcoRI	GAATTC	2 cut(s)	2312, 3182
EcoRII	CCWGG	7 cut(s)	1294, 1429, 1702, 2994, 3043, 3186, 3191
EcoRV	GATATC	2 cut(s)	1836, 2633
EcoT14I	CCWWGG	3 cut(s)	1953, 2346, 2672
EcoT38I	GRGCYC	3 cut(s)	743, 933, 2520
ErhI	CCWWGG	3 cut(s)	1953, 2346, 2672
Esp3I	CGTCTC	1 cut(s)	1898
FalI	AAGNNNNNCTT	4 cut(s)	1467, 1499, 2363, 2395
FaqI	GGGAC	3 cut(s)	932, 1433, 1769
FauI	CCCGC	2 cut(s)	527, 3075
FauNDI	CATATG	2 cut(s)	1222, 2059
FbaI	TGATCA	5 cut(s)	127, 142, 1669, 2860, 2944
FblI	GTMKAC	2 cut(s)	2712, 3076
Fnu4HI	GCNGC	9 cut(s)	232, 264, 1399, 2070, 2152, 2375, 3069, 3135, 3220
FokI	GGATG	7 cut(s)	194, 429, 1214, 1349, 1892, 2002, 3162
FriOI	GRGCYC	3 cut(s)	743, 933, 2520
Fsp4HI	GCNGC	9 cut(s)	232, 264, 1399, 2070, 2152, 2375, 3069, 3135, 3220
FspBI	CTAG	2 cut(s)	954, 3216
GlaI	GCGC	6 cut(s)	26, 1106, 1435, 2160, 2567, 3133
GluI	GCNGC	9 cut(s)	232, 264, 1399, 2070, 2152, 2375, 3069, 3135, 3220
GsaI	CCCAGC	2 cut(s)	1413, 2250
GsuI	CTGGAG	1 cut(s)	1845
HaeII	RGCGCY	1 cut(s)	1108
HaeIII	GGCC	8 cut(s)	271, 307, 374, 1707, 2305, 2526, 2994, 3191
HapII	CCGG	2 cut(s)	2797, 3062
HgaI	GACGC	3 cut(s)	779, 1880, 1961
HhaI	GCGC	6 cut(s)	27, 1107, 1436, 2161, 2568, 3134
Hin6I	GCGC	6 cut(s)	25, 1105, 1434, 2159, 2566, 3132
HinP1I	GCGC	6 cut(s)	25, 1105, 1434, 2159, 2566, 3132
HincII	GTYRAC	2 cut(s)	2190, 3077
HindII	GTYRAC	2 cut(s)	2190, 3077
HindIII	AAGCTT	5 cut(s)	69, 872, 917, 972, 2967
HpaII	CCGG	2 cut(s)	2797, 3062
HphI	GGTGA	2 cut(s)	938, 1344
Hpy166II	GTNNAC	6 cut(s)	851, 1244, 2021, 2190, 2713, 3077
Hpy8I	GTNNAC	6 cut(s)	851, 1244, 2021, 2190, 2713, 3077
Hpy99I	CGWCG	2 cut(s)	544, 3081
HpyAV	CCTTC	8 cut(s)	325, 995, 1498, 1600, 1814, 2571, 2899, 3148
HpyCH4III	ACNGT	7 cut(s)	116, 394, 1315, 1647, 1712, 2659, 2745
HpyCH4IV	ACGT	5 cut(s)	403, 775, 840, 2386, 2464
HpyF10VI	GCNNNNNNNGC	9 cut(s)	536, 1945, 2069, 2075, 2167, 2371, 2537, 2546, 2788
HpyF3I	CTNAG	8 cut(s)	135, 441, 546, 2084, 2105, 2298, 2366, 2562
HpySE526I	ACGT	5 cut(s)	403, 775, 840, 2386, 2464
HspAI	GCGC	6 cut(s)	25, 1105, 1434, 2159, 2566, 3132
Ksp22I	TGATCA	5 cut(s)	127, 142, 1669, 2860, 2944
LguI	GCTCTTC	3 cut(s)	1678, 2384, 2508
LmnI	GCTCC	6 cut(s)	355, 641, 738, 1127, 1998, 2908
Lsp1109I	GCAGC	9 cut(s)	243, 275, 1385, 2081, 2163, 2386, 3080, 3121, 3231
LweI	GCATC	6 cut(s)	1670, 1980, 2087, 2146, 2245, 3184
MaeI	CTAG	2 cut(s)	954, 3216
MaeII	ACGT	5 cut(s)	403, 775, 840, 2386, 2464
MaeIII	GTNAC	7 cut(s)	508, 1081, 1712, 1916, 1979, 2758, 3237
MflI	RGATCY	2 cut(s)	334, 2436
MhlI	GDGCHC	5 cut(s)	215, 743, 933, 2038, 2520
MlsI	TGGCCA	1 cut(s)	1707
MluNI	TGGCCA	1 cut(s)	1707
MmeI	TCCRAC	3 cut(s)	15, 1188, 1877
Mox20I	TGGCCA	1 cut(s)	1707
MroXI	GAANNNNTTC	5 cut(s)	769, 1254, 1387, 2121, 2581
MscI	TGGCCA	1 cut(s)	1707
MslI	CAYNNNNRTG	3 cut(s)	1073, 1538, 2142
Msp20I	TGGCCA	1 cut(s)	1707
MspA1I	CMGCKG	3 cut(s)	1409, 1667, 3071
MspCI	CTTAAG	1 cut(s)	1829
MspI	CCGG	2 cut(s)	2797, 3062
MspR9I	CCNGG	9 cut(s)	1296, 1431, 1704, 2797, 2798, 2996, 3045, 3188, 3193
Mva1269I	GAATGC	4 cut(s)	771, 1474, 1948, 2170
MvaI	CCWGG	7 cut(s)	1296, 1431, 1704, 2996, 3045, 3188, 3193
MvnI	CGCG	1 cut(s)	1260
MwoI	GCNNNNNNNGC	9 cut(s)	536, 1945, 2069, 2075, 2167, 2371, 2537, 2546, 2788
NciI	CCSGG	2 cut(s)	2797, 2798
NcoI	CCATGG	2 cut(s)	1953, 2346
NdeI	CATATG	2 cut(s)	1222, 2059
NmuCI	GTSAC	4 cut(s)	1081, 1916, 1979, 3237
NruI	TCGCGA	1 cut(s)	1260
NspI	RCATGY	6 cut(s)	299, 734, 1026, 1445, 2752, 2795
NspV	TTCGAA	1 cut(s)	2382
OliI	CACNNNNGTG	1 cut(s)	1538
PaeI	GCATGC	1 cut(s)	2795
PaeR7I	CTCGAG	1 cut(s)	2037
PagI	TCATGA	3 cut(s)	190, 648, 2013
PceI	AGGCCT	2 cut(s)	271, 307
PciI	ACATGT	2 cut(s)	730, 2748
PciSI	GCTCTTC	3 cut(s)	1678, 2384, 2508
PcsI	WCGNNNNNNNCGW	1 cut(s)	2626
PctI	GAATGC	4 cut(s)	771, 1474, 1948, 2170
PdmI	GAANNNNTTC	5 cut(s)	769, 1254, 1387, 2121, 2581
PflMI	CCANNNNNTGG	3 cut(s)	89, 1868, 2921
PkrI	GCNGC	9 cut(s)	233, 265, 1400, 2071, 2153, 2376, 3070, 3136, 3221
PmaCI	CACGTG	1 cut(s)	776
PmlI	CACGTG	1 cut(s)	776
Ppu21I	YACGTR	2 cut(s)	404, 776
PpuMI	RGGWCCY	1 cut(s)	1700
PscI	ACATGT	2 cut(s)	730, 2748
PshBI	ATTAAT	1 cut(s)	378
PsiI	TTATAA	1 cut(s)	1743
Psp124BI	GAGCTC	2 cut(s)	743, 2520
Psp5II	RGGWCCY	1 cut(s)	1700
Psp6I	CCWGG	7 cut(s)	1294, 1429, 1702, 2994, 3043, 3186, 3191
PspCI	CACGTG	1 cut(s)	776
PspFI	CCCAGC	2 cut(s)	1409, 2246
PspGI	CCWGG	7 cut(s)	1294, 1429, 1702, 2994, 3043, 3186, 3191
PspPI	GGNCC	4 cut(s)	1700, 1903, 2524, 2741
PspPPI	RGGWCCY	1 cut(s)	1700
PspXI	VCTCGAGB	1 cut(s)	2037
PstI	CTGCAG	1 cut(s)	265
PstNI	CAGNNNCTG	3 cut(s)	1703, 1868, 2699
PsuI	RGATCY	2 cut(s)	334, 2436
PvuII	CAGCTG	3 cut(s)	1409, 1667, 3071
RruI	TCGCGA	1 cut(s)	1260
RsaI	GTAC	5 cut(s)	729, 786, 1423, 2747, 2753
RsaNI	GTAC	5 cut(s)	728, 785, 1422, 2746, 2752
RseI	CAYNNNNRTG	3 cut(s)	1073, 1538, 2142
SacI	GAGCTC	2 cut(s)	743, 2520
SalI	GTCGAC	1 cut(s)	3075
SapI	GCTCTTC	3 cut(s)	1678, 2384, 2508
SatI	GCNGC	9 cut(s)	232, 264, 1399, 2070, 2152, 2375, 3069, 3135, 3220
Sau96I	GGNCC	4 cut(s)	1700, 1903, 2524, 2741
ScrFI	CCNGG	9 cut(s)	1296, 1431, 1704, 2797, 2798, 2996, 3045, 3188, 3193
SduI	GDGCHC	5 cut(s)	215, 743, 933, 2038, 2520
SfaNI	GCATC	6 cut(s)	1670, 1980, 2087, 2146, 2245, 3184
SfcI	CTRYAG	1 cut(s)	261
Sfr274I	CTCGAG	1 cut(s)	2037
SfuI	TTCGAA	1 cut(s)	2382
SinI	GGWCC	3 cut(s)	1700, 1903, 2741
SlaI	CTCGAG	1 cut(s)	2037
SmaI	CCCGGG	1 cut(s)	2798
SmiMI	CAYNNNNRTG	3 cut(s)	1073, 1538, 2142
SmlI	CTYRAG	4 cut(s)	677, 1728, 1829, 2037
SmoI	CTYRAG	4 cut(s)	677, 1728, 1829, 2037
SphI	GCATGC	1 cut(s)	2795
SrfI	GCCCGGGC	1 cut(s)	2798
SseBI	AGGCCT	2 cut(s)	271, 307
SsiI	CCGC	7 cut(s)	520, 736, 821, 1717, 1764, 1901, 3082
SspI	AATATT	3 cut(s)	53, 663, 1825
SspMI	CTAG	2 cut(s)	954, 3216
SstI	GAGCTC	2 cut(s)	743, 2520
StuI	AGGCCT	2 cut(s)	271, 307
StyD4I	CCNGG	9 cut(s)	1294, 1429, 1702, 2795, 2796, 2994, 3043, 3186, 3191
StyI	CCWWGG	3 cut(s)	1953, 2346, 2672
TaaI	ACNGT	7 cut(s)	116, 394, 1315, 1647, 1712, 2659, 2745
TaiI	ACGT	5 cut(s)	406, 778, 843, 2389, 2467
TatI	WGTACW	2 cut(s)	727, 784
TseFI	GTSAC	4 cut(s)	1081, 1916, 1979, 3237
TseI	GCWGC	9 cut(s)	231, 263, 1398, 2069, 2151, 2374, 3068, 3134, 3219
Tsp45I	GTSAC	4 cut(s)	1081, 1916, 1979, 3237
TspGWI	ACGGA	2 cut(s)	672, 1502
TspMI	CCCGGG	1 cut(s)	2796
Van91I	CCANNNNNTGG	3 cut(s)	89, 1868, 2921
Vha464I	CTTAAG	1 cut(s)	1829
VpaK11BI	GGWCC	3 cut(s)	1700, 1903, 2741
VspI	ATTAAT	1 cut(s)	378
XceI	RCATGY	6 cut(s)	299, 734, 1026, 1445, 2752, 2795
XhoI	CTCGAG	1 cut(s)	2037
XmaI	CCCGGG	1 cut(s)	2796
XmiI	GTMKAC	2 cut(s)	2712, 3076
XmnI	GAANNNNTTC	5 cut(s)	769, 1254, 1387, 2121, 2581
XspI	CTAG	2 cut(s)	954, 3216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.