Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0005552

Physical Location & Seq

Genomic Coordinates Forward (+)

63766775 .. 63771178

Gene Structure 4404 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010164

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGAAGAAGCTGAAGGAATTGCAGGAGAAGGAAGACACACTTCTGCCATCAAAAAGCACCGAGGCTTTAATTTGCATTGCATATGCTCTTCTGCAGTCATCACAAAATATTGGCCAGGTTAAATCAAGAAAGAGAAAACGAAGCAGAGCCCTAATATTCTCCAAAGCTGGAATTGATGTTCCCCATGCTGACCAACCATTTAAGAAGATAGATTGTGACGAAATGTGTAGTGGAAGTGAACCTGAGTTGGAAGAGATGCAGAGTCTTGACAAAAATGAGGAGGGCCAACCAGTGATGGTACAAAAGGAAGTTGAAAAAAACACATCAATTACTTTGAAGTCCTCTCAGGGGCTAGACTGTGGCAAACCGCAAAAGATAAAGGAGAGTCCGAAAGTAAATTCCAGCAGGCCAAGTGAACTCCAGCAGCGCAAGAATGTTGTACATGTATCAAGGCCTAATGAAGTTGAAAATGCAAGGGGTTATCTTCCAATAATAGATATGGAGATGGATATAATGAAGGCTATTAATGAAAATTCTGTTGTAATTATACGTGGAGAGACCGGATGTGGTAAAACAACCCAAGTTCCTCAGTTTCTTTATGAAGCTTGCTTTGCCAGAACTGCTAATATAGGTGTTATTCAACCCCGCGTTCTTGCACTTGGTCTGCATTTGGGTAAAGAGGTTGGCTTTCAAGTCAGGTATGAAAAAAGGATTGGAGAAAATTGCTCCATCAAATTCATGACAGACGGAATATTACTACGAGAAATCCAGTTAAATGAATCCTTGTTATTGTGTAGTGACTTTTGGTTGAAGCAGTACTCTGTCATCATTCTTGAGGAGAAATTATATGGCGAGCAGCTAAATTTATTGCATGAGGGAGTAACTGTAAGTTCTGAAAACCGGATTTTTCCATTAAAGCTTGTGCTGATGAGTGCCACCTTGCAATTCTCAAAGAAAACTGAAGCTAATTATATAAATGCGGCATATAAAAAAGTCCTGAAAATTCCCAAGAGTATGCTACATGGGAGCATACTAGTTTTTGTCACCGGGAAGAGGCAGATAGAGTCGTTGTGTCAAAAGCTACTTAGAGCTTCGTGTAAAATGGTTATGAAAATGTCAATTGGGAGTGACAGCACTGAAGTTTCTGAAATAAACCCTCTAAAGGTGAAGAAGTACAATCCCTCAAATAGCATGGAGACATTTGAAGTAGAGTGGATGAGTACGGCATCGGCTGATCAACGTAAAGGAAGAGCTGGAAGAACAGGGCCTGGCCACTGTTACCGCCTATATTCTTCTGCAGTATATGATAATTTTCCTGAGTTTTCCGTACCTGAAATATCCAAAGTCCCTGTTGATGGTCTTGTCCTTCTACTGAAGTCCATGGATATCCACGAGGTATCAAATTTTCCATTTCCTACTCCTCCAGAGGGTGTGGTTGAAGCAGAGCTTTGCTTAAATCACCTTGGAGCACTTGATGAAAACAAAAGATCAAGGATGCTCCTTACTACTATTCAAATCATGCATAAGAAAAAAATTGATCCCAGGCCTAATTTAGTGCTAGCATATGCACCTGCAGCAGCTGCAGATTTGAGTTCGTCAAATCCTTTTGATGGAACTTACGAGCAAGAAAATGTAAAAGTTTCTGGTGAAGAACTTTTGAATACTAGCAGTGATGCTCTGTCAATAGCTAATGCTTTGCGGTGCTATGAACTTTCGGAGAGGCCATCAGAATTCTGCAATGAAAATGCTCTACACCTGAAAACCATGTTTTCCGGAGGTGATGACGAGCTACGCAATTTTTCATGGATGTATGGAACTCTGGAAGATGTACAACATGCTTGGCATGATAAGAATCTTCTTGATAAAAATCCTCTTTCAAGGAATGAGGAAAGGCTCTTGAGGCAAGGCTGGCAAGCTATCTGCGCTTATGCTCGGTCTTTAGGCACTTTACCTGACCCCAAAAAAGGTACCAGACATCGTTATGATCCAATAACAGACCAGGTAGTACATGATGTCGTTCCAACCTTTGGTGATCATTTGTGTGATCTTCCACCGCATCCTCAGGCAGTTACTGAGTTTGAAGATCGAGTGGAAGCTTTCGCTTTTGCTTTGCTTGATGGCCAAGTATTTCCTTGCTTAAAACCTGTTAGCAAGTCAAGAGATCCTCCTGCTATTGTTTTAAGGCCATTAGAATTAGTTCCAGAACAGATTTGGAATCATCTGGAGAAGCTCAAGACAAAAAAACATAGACAGCTGTGCTATGTCACGAGAGGTATGGAAGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

762

Amino Acids

85.74

Weight (kDa)

7.01

Isoelectric Point (pI)

46.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005552)

Species	Orthologous Gene IDs
prunus_persica	Prupe.1G445700_v2.0.a1 Prupe.1G445700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0386401 RchiOBHm_Chr4g0386411 RchiOBHm_Chr4g0386421
rosa_laevigata	RLG00000010164
rosa_multiflora	Rmu_sc0000472.1_g000003 Rmu_sc0001942.1_g000001
rosa_roxburghii	Rroxscaffold_5G00333900 Rroxscaffold_5G00333930
rosa_rugosa	Rorug03G0306700 Rorug03G0306800 Rorug03G0306900
rosa_samantha	Rh4AG011200 Rh4AG011300 Rh4AG011400 Rh4BG008800 Rh4BG008900 Rh4CG013400 Rh4CG013500 Rh4CG013600 Rh4CG013700 Rh4CG013800 Rh4CG013900 Rh4CG014000 Rh4DG009400 Rh4DG009600 Rh4DG009700
rosa_wichuraiana	Rw4G000060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1579
Acc36I	ACCTGC	1 cut(s)	1579
Acc65I	GGTACC	1 cut(s)	1967
AccB1I	GGYRCC	1 cut(s)	1967
AccB7I	CCANNNNNTGG	1 cut(s)	2027
AccII	CGCG	1 cut(s)	648
AccIII	TCCGGA	1 cut(s)	1772
AciI	CCGC	6 cut(s)	368, 646, 980, 1282, 1699, 2054
AclWI	GGATC	3 cut(s)	1532, 1979, 2156
AcoI	YGGCCR	3 cut(s)	112, 1270, 2119
AcsI	RAATTY	7 cut(s)	397, 532, 734, 862, 1002, 1402, 1730
AcuI	CTGAAG	4 cut(s)	32, 981, 1158, 1394
AfaI	GTAC	9 cut(s)	300, 441, 818, 1175, 1222, 1329, 1830, 1969, 2007
AfiI	CCNNNNNNNGG	8 cut(s)	348, 1053, 1162, 1355, 1427, 1610, 1964, 2027
AflIII	ACRYGT	1 cut(s)	442
AhlI	ACTAGT	1 cut(s)	1033
AjnI	CCWGG	4 cut(s)	114, 1267, 1541, 1998
AjuI	GAANNNNNNNTTGG	2 cut(s)	696, 728
AloI	GAACNNNNNNTCC	2 cut(s)	162, 194
Alw21I	GWGCWC	1 cut(s)	1471
Alw26I	GTCTC	2 cut(s)	551, 1190
AlwI	GGATC	3 cut(s)	1532, 1979, 2156
AlwNI	CAGNNNCTG	3 cut(s)	1268, 1580, 2072
Aor13HI	TCCGGA	1 cut(s)	1772
ApeKI	GCWGC	5 cut(s)	424, 856, 1574, 1577, 1580
ApoI	RAATTY	7 cut(s)	397, 532, 734, 862, 1002, 1402, 1730
AseI	ATTAAT	1 cut(s)	525
Asp700I	GAANNNNTTC	1 cut(s)	2196
Asp718I	GGTACC	1 cut(s)	1967
AspLEI	GCGC	2 cut(s)	429, 1925
AspS9I	GGNCC	2 cut(s)	283, 1265
AsuC2I	CCSGG	1 cut(s)	1048
AsuHPI	GGTGA	6 cut(s)	1036, 1177, 1451, 1658, 1790, 2042
AsuNHI	GCTAGC	1 cut(s)	1558
AxyI	CCTNAGG	1 cut(s)	2061
BalI	TGGCCA	3 cut(s)	114, 1272, 2121
BanI	GGYRCC	1 cut(s)	1967
BanII	GRGCYC	1 cut(s)	151
BauI	CACGAG	2 cut(s)	1391, 2266
BbsI	GAAGAC	1 cut(s)	39
Bbv12I	GWGCWC	1 cut(s)	1471
BbvI	GCAGC	5 cut(s)	436, 868, 1567, 1586, 1589
BccI	CCATC	8 cut(s)	55, 289, 499, 737, 1349, 1604, 1732, 2111
BceAI	ACGGC	1 cut(s)	1239
BciT130I	CCWGG	4 cut(s)	116, 1269, 1543, 2000
BclI	TGATCA	2 cut(s)	1234, 2032
BcnI	CCSGG	1 cut(s)	1048
BcoDI	GTCTC	2 cut(s)	551, 1190
BcuI	ACTAGT	1 cut(s)	1033
BfaI	CTAG	4 cut(s)	353, 1034, 1559, 1665
BfmI	CTRYAG	4 cut(s)	92, 1296, 1572, 1581
BfuAI	ACCTGC	1 cut(s)	1579
BisI	GCNGC	6 cut(s)	425, 857, 981, 1575, 1578, 1581
BlsI	GCNGC	6 cut(s)	426, 858, 982, 1576, 1579, 1582
BmcAI	AGTACT	1 cut(s)	818
Bme1390I	CCNGG	5 cut(s)	116, 1048, 1269, 1543, 2000
BmgT120I	GGNCC	2 cut(s)	283, 1265
BmiI	GGNNCC	1 cut(s)	1969
BmrFI	CCNGG	5 cut(s)	116, 1048, 1269, 1543, 2000
BmsI	GCATC	5 cut(s)	246, 1235, 1485, 1663, 2065
BmtI	GCTAGC	1 cut(s)	1562
BpiI	GAAGAC	1 cut(s)	39
BpmI	CTGGAG	3 cut(s)	404, 1407, 2243
BpuEI	CTTGAG	3 cut(s)	854, 1918, 2216
BpuMI	CCSGG	1 cut(s)	1048
BsaAI	YACGTR	1 cut(s)	551
BsaBI	GATNNNNATC	2 cut(s)	1851, 1866
BsaI	GGTCTC	1 cut(s)	551
BsaJI	CCNNGG	4 cut(s)	60, 1380, 1462, 1541
BsaWI	WCCGGW	3 cut(s)	560, 900, 1772
BsaXI	ACNNNNNCTCC	2 cut(s)	870, 900
Bsc4I	CCNNNNNNNGG	8 cut(s)	348, 1053, 1162, 1355, 1427, 1610, 1964, 2027
Bse1I	ACTGG	2 cut(s)	290, 769
Bse21I	CCTNAGG	1 cut(s)	2061
Bse3DI	GCAATG	2 cut(s)	75, 1744
Bse8I	GATNNNNATC	2 cut(s)	1851, 1866
BseAI	TCCGGA	1 cut(s)	1772
BseBI	CCWGG	4 cut(s)	116, 1269, 1543, 2000
BseDI	CCNNGG	4 cut(s)	60, 1380, 1462, 1541
BseGI	GGATG	5 cut(s)	569, 1221, 1500, 1812, 2056
BseJI	GATNNNNATC	2 cut(s)	1851, 1866
BseLI	CCNNNNNNNGG	8 cut(s)	348, 1053, 1162, 1355, 1427, 1610, 1964, 2027
BseMI	GCAATG	2 cut(s)	75, 1744
BseMII	CTCAG	6 cut(s)	234, 359, 602, 1308, 2064, 2075
BseNI	ACTGG	2 cut(s)	290, 769
BseRI	GAGGAG	3 cut(s)	293, 851, 1410
BseXI	GCAGC	5 cut(s)	436, 868, 1567, 1586, 1589
Bsh1236I	CGCG	1 cut(s)	648
BshNI	GGYRCC	1 cut(s)	1967
BsiHKAI	GWGCWC	1 cut(s)	1471
BsiSI	CCGG	4 cut(s)	561, 901, 1047, 1773
BslFI	GGGAC	1 cut(s)	1331
BslI	CCNNNNNNNGG	8 cut(s)	348, 1053, 1162, 1355, 1427, 1610, 1964, 2027
BsmAI	GTCTC	2 cut(s)	551, 1190
BsmFI	GGGAC	1 cut(s)	1331
Bso31I	GGTCTC	1 cut(s)	551
Bsp1286I	GDGCHC	2 cut(s)	151, 1471
Bsp13I	TCCGGA	1 cut(s)	1772
Bsp1407I	TGTACA	2 cut(s)	439, 1828
Bsp143I	GATC	8 cut(s)	1234, 1487, 1537, 1984, 2032, 2044, 2083, 2161
Bsp19I	CCATGG	1 cut(s)	1380
BspACI	CCGC	6 cut(s)	368, 646, 980, 1282, 1699, 2054
BspCNI	CTCAG	6 cut(s)	235, 358, 601, 1309, 2065, 2074
BspEI	TCCGGA	1 cut(s)	1772
BspFNI	CGCG	1 cut(s)	648
BspHI	TCATGA	1 cut(s)	738
BspLI	GGNNCC	1 cut(s)	1969
BspMAI	CTGCAG	4 cut(s)	96, 1300, 1576, 1585
BspMI	ACCTGC	1 cut(s)	1579
BspOI	GCTAGC	1 cut(s)	1562
BspPI	GGATC	3 cut(s)	1532, 1979, 2156
BspQI	GCTCTTC	2 cut(s)	93, 1243
BspT107I	GGYRCC	1 cut(s)	1967
BspTNI	GGTCTC	1 cut(s)	551
BsrDI	GCAATG	2 cut(s)	75, 1744
BsrGI	TGTACA	2 cut(s)	439, 1828
BsrI	ACTGG	2 cut(s)	290, 769
BssECI	CCNNGG	4 cut(s)	60, 1380, 1462, 1541
BssMI	GATC	8 cut(s)	1234, 1487, 1537, 1984, 2032, 2044, 2083, 2161
BssSI	CACGAG	2 cut(s)	1391, 2266
BssT1I	CCWWGG	2 cut(s)	1380, 1462
Bst2BI	CACGAG	2 cut(s)	1391, 2266
Bst2UI	CCWGG	4 cut(s)	116, 1269, 1543, 2000
Bst4CI	ACNGT	3 cut(s)	359, 886, 1277
Bst6I	CTCTTC	4 cut(s)	93, 246, 1046, 1243
BstAPI	GCANNNNNTGC	1 cut(s)	1580
BstAUI	TGTACA	2 cut(s)	439, 1828
BstBAI	YACGTR	1 cut(s)	551
BstC8I	GCNNGC	6 cut(s)	407, 607, 854, 1560, 1910, 1914
BstDEI	CTNAG	7 cut(s)	243, 345, 588, 1085, 1317, 2061, 2073
BstDSI	CCRYGG	1 cut(s)	1380
BstF5I	GGATG	5 cut(s)	569, 1221, 1500, 1812, 2056
BstFNI	CGCG	1 cut(s)	648
BstHHI	GCGC	2 cut(s)	429, 1925
BstKTI	GATC	8 cut(s)	1237, 1490, 1540, 1987, 2035, 2047, 2086, 2164
BstMAI	GTCTC	2 cut(s)	551, 1190
BstMBI	GATC	8 cut(s)	1234, 1487, 1537, 1984, 2032, 2044, 2083, 2161
BstMWI	GCNNNNNNNGC	7 cut(s)	611, 620, 1574, 1580, 1900, 1909, 1922
BstNI	CCWGG	4 cut(s)	116, 1269, 1543, 2000
BstNSI	RCATGY	2 cut(s)	446, 1838
BstSCI	CCNGG	5 cut(s)	114, 1046, 1267, 1541, 1998
BstSFI	CTRYAG	4 cut(s)	92, 1296, 1572, 1581
BstUI	CGCG	1 cut(s)	648
BstV1I	GCAGC	5 cut(s)	436, 868, 1567, 1586, 1589
BstV2I	GAAGAC	1 cut(s)	39
BstX2I	RGATCY	1 cut(s)	2161
BstYI	RGATCY	1 cut(s)	2161
Bsu36I	CCTNAGG	1 cut(s)	2061
BtgI	CCRYGG	1 cut(s)	1380
BtsCI	GGATG	5 cut(s)	569, 1221, 1500, 1812, 2056
BtsI	GCAGTG	1 cut(s)	1675
BtsIMutI	CAGTG	4 cut(s)	297, 1134, 1273, 1675
BveI	ACCTGC	1 cut(s)	1579
Cac8I	GCNNGC	6 cut(s)	407, 607, 854, 1560, 1910, 1914
CaiI	CAGNNNCTG	3 cut(s)	1268, 1580, 2072
CciI	TCATGA	1 cut(s)	738
CfoI	GCGC	2 cut(s)	429, 1925
Cfr13I	GGNCC	2 cut(s)	283, 1265
CsiI	ACCWGGT	1 cut(s)	1998
Csp6I	GTAC	9 cut(s)	299, 440, 817, 1174, 1221, 1328, 1829, 1968, 2006
CviQI	GTAC	9 cut(s)	299, 440, 817, 1174, 1221, 1328, 1829, 1968, 2006
DdeI	CTNAG	7 cut(s)	243, 345, 588, 1085, 1317, 2061, 2073
DpnI	GATC	8 cut(s)	1236, 1489, 1539, 1986, 2034, 2046, 2085, 2163
DpnII	GATC	8 cut(s)	1234, 1487, 1537, 1984, 2032, 2044, 2083, 2161
EaeI	YGGCCR	3 cut(s)	112, 1270, 2119
Eam1104I	CTCTTC	4 cut(s)	93, 246, 1046, 1243
EarI	CTCTTC	4 cut(s)	93, 246, 1046, 1243
Eco130I	CCWWGG	2 cut(s)	1380, 1462
Eco147I	AGGCCT	2 cut(s)	454, 1546
Eco24I	GRGCYC	1 cut(s)	151
Eco31I	GGTCTC	1 cut(s)	551
Eco32I	GATATC	1 cut(s)	1387
Eco57I	CTGAAG	4 cut(s)	32, 981, 1158, 1394
Eco81I	CCTNAGG	1 cut(s)	2061
EcoO109I	RGGNCCY	1 cut(s)	1265
EcoRI	GAATTC	1 cut(s)	1730
EcoRII	CCWGG	4 cut(s)	114, 1267, 1541, 1998
EcoRV	GATATC	1 cut(s)	1387
EcoT14I	CCWWGG	2 cut(s)	1380, 1462
EcoT22I	ATGCAT	1 cut(s)	1524
EcoT38I	GRGCYC	1 cut(s)	151
ErhI	CCWWGG	2 cut(s)	1380, 1462
FalI	AAGNNNNNCTT	4 cut(s)	24, 56, 1431, 1463
FaqI	GGGAC	1 cut(s)	1331
FauI	CCCGC	1 cut(s)	653
FauNDI	CATATG	2 cut(s)	82, 1564
FbaI	TGATCA	2 cut(s)	1234, 2032
Fnu4HI	GCNGC	6 cut(s)	425, 857, 981, 1575, 1578, 1581
FokI	GGATG	5 cut(s)	576, 1228, 1507, 1819, 2043
FriOI	GRGCYC	1 cut(s)	151
Fsp4HI	GCNGC	6 cut(s)	425, 857, 981, 1575, 1578, 1581
FspBI	CTAG	4 cut(s)	353, 1034, 1559, 1665
GlaI	GCGC	2 cut(s)	428, 1924
GluI	GCNGC	6 cut(s)	425, 857, 981, 1575, 1578, 1581
GsuI	CTGGAG	3 cut(s)	404, 1407, 2243
HapII	CCGG	4 cut(s)	561, 901, 1047, 1773
HhaI	GCGC	2 cut(s)	429, 1925
Hin6I	GCGC	2 cut(s)	427, 1923
HinP1I	GCGC	2 cut(s)	427, 1923
HindIII	AAGCTT	3 cut(s)	603, 917, 2094
HinfI	GANTC	6 cut(s)	262, 385, 779, 1064, 1852, 2215
HpaII	CCGG	4 cut(s)	561, 901, 1047, 1773
HphI	GGTGA	6 cut(s)	1036, 1177, 1451, 1658, 1790, 2042
Hpy166II	GTNNAC	2 cut(s)	239, 416
Hpy188I	TCNGA	5 cut(s)	390, 895, 1147, 1717, 1729
Hpy8I	GTNNAC	2 cut(s)	239, 416
HpyAV	CCTTC	5 cut(s)	7, 22, 511, 1376, 2273
HpyCH4III	ACNGT	3 cut(s)	359, 886, 1277
HpyCH4IV	ACGT	2 cut(s)	550, 1240
HpyF10VI	GCNNNNNNNGC	7 cut(s)	611, 620, 1574, 1580, 1900, 1909, 1922
HpyF3I	CTNAG	7 cut(s)	243, 345, 588, 1085, 1317, 2061, 2073
HpySE526I	ACGT	2 cut(s)	550, 1240
HspAI	GCGC	2 cut(s)	427, 1923
Kpn2I	TCCGGA	1 cut(s)	1772
KpnI	GGTACC	1 cut(s)	1971
Ksp22I	TGATCA	2 cut(s)	1234, 2032
Kzo9I	GATC	8 cut(s)	1234, 1487, 1537, 1984, 2032, 2044, 2083, 2161
LguI	GCTCTTC	2 cut(s)	93, 1243
LmnI	GCTCC	4 cut(s)	731, 1026, 1466, 1503
Lsp1109I	GCAGC	5 cut(s)	436, 868, 1567, 1586, 1589
LweI	GCATC	5 cut(s)	246, 1235, 1485, 1663, 2065
MabI	ACCWGGT	1 cut(s)	1998
MaeI	CTAG	4 cut(s)	353, 1034, 1559, 1665
MaeII	ACGT	2 cut(s)	550, 1240
MaeIII	GTNAC	8 cut(s)	215, 797, 880, 1042, 1127, 1277, 2068, 2263
MalI	GATC	8 cut(s)	1236, 1489, 1539, 1986, 2034, 2046, 2085, 2163
MboI	GATC	8 cut(s)	1234, 1487, 1537, 1984, 2032, 2044, 2083, 2161
MfeI	CAATTG	1 cut(s)	1119
MflI	RGATCY	1 cut(s)	2161
MhlI	GDGCHC	2 cut(s)	151, 1471
MlsI	TGGCCA	3 cut(s)	114, 1272, 2121
MluNI	TGGCCA	3 cut(s)	114, 1272, 2121
MlyI	GAGTC	3 cut(s)	271, 394, 1073
MmeI	TCCRAC	2 cut(s)	228, 2045
Mox20I	TGGCCA	3 cut(s)	114, 1272, 2121
Mph1103I	ATGCAT	1 cut(s)	1524
MroI	TCCGGA	1 cut(s)	1772
MroXI	GAANNNNTTC	1 cut(s)	2196
MscI	TGGCCA	3 cut(s)	114, 1272, 2121
MslI	CAYNNNNRTG	2 cut(s)	1980, 2040
Msp20I	TGGCCA	3 cut(s)	114, 1272, 2121
MspA1I	CMGCKG	2 cut(s)	1580, 2254
MspI	CCGG	4 cut(s)	561, 901, 1047, 1773
MspR9I	CCNGG	5 cut(s)	116, 1048, 1269, 1543, 2000
MunI	CAATTG	1 cut(s)	1119
MvaI	CCWGG	4 cut(s)	116, 1269, 1543, 2000
MvnI	CGCG	1 cut(s)	648
MwoI	GCNNNNNNNGC	7 cut(s)	611, 620, 1574, 1580, 1900, 1909, 1922
NciI	CCSGG	1 cut(s)	1048
NcoI	CCATGG	1 cut(s)	1380
NdeI	CATATG	2 cut(s)	82, 1564
NdeII	GATC	8 cut(s)	1234, 1487, 1537, 1984, 2032, 2044, 2083, 2161
NheI	GCTAGC	1 cut(s)	1558
NlaIV	GGNNCC	1 cut(s)	1969
NmuCI	GTSAC	5 cut(s)	215, 797, 1042, 1127, 2263
NsiI	ATGCAT	1 cut(s)	1524
NspI	RCATGY	2 cut(s)	446, 1838
PagI	TCATGA	1 cut(s)	738
PaqCI	CACCTGC	1 cut(s)	1579
PceI	AGGCCT	2 cut(s)	454, 1546
PciI	ACATGT	1 cut(s)	442
PciSI	GCTCTTC	2 cut(s)	93, 1243
PdmI	GAANNNNTTC	1 cut(s)	2196
PfeI	GAWTC	3 cut(s)	779, 1852, 2215
PflMI	CCANNNNNTGG	1 cut(s)	2027
PkrI	GCNGC	6 cut(s)	426, 858, 982, 1576, 1579, 1582
PleI	GAGTC	3 cut(s)	270, 393, 1072
PpsI	GAGTC	3 cut(s)	270, 393, 1072
Ppu21I	YACGTR	1 cut(s)	551
PscI	ACATGT	1 cut(s)	442
PshBI	ATTAAT	1 cut(s)	525
Psp6I	CCWGG	4 cut(s)	114, 1267, 1541, 1998
PspGI	CCWGG	4 cut(s)	114, 1267, 1541, 1998
PspN4I	GGNNCC	1 cut(s)	1969
PspPI	GGNCC	2 cut(s)	283, 1265
PstI	CTGCAG	4 cut(s)	96, 1300, 1576, 1585
PstNI	CAGNNNCTG	3 cut(s)	1268, 1580, 2072
PsuI	RGATCY	1 cut(s)	2161
PvuII	CAGCTG	2 cut(s)	1580, 2254
RsaI	GTAC	9 cut(s)	300, 441, 818, 1175, 1222, 1329, 1830, 1969, 2007
RsaNI	GTAC	9 cut(s)	299, 440, 817, 1174, 1221, 1328, 1829, 1968, 2006
RseI	CAYNNNNRTG	2 cut(s)	1980, 2040
SapI	GCTCTTC	2 cut(s)	93, 1243
SatI	GCNGC	6 cut(s)	425, 857, 981, 1575, 1578, 1581
Sau3AI	GATC	8 cut(s)	1234, 1487, 1537, 1984, 2032, 2044, 2083, 2161
Sau96I	GGNCC	2 cut(s)	283, 1265
ScaI	AGTACT	1 cut(s)	818
SchI	GAGTC	3 cut(s)	271, 394, 1073
ScrFI	CCNGG	5 cut(s)	116, 1048, 1269, 1543, 2000
SduI	GDGCHC	2 cut(s)	151, 1471
SexAI	ACCWGGT	1 cut(s)	1998
SfaNI	GCATC	5 cut(s)	246, 1235, 1485, 1663, 2065
SfcI	CTRYAG	4 cut(s)	92, 1296, 1572, 1581
SmiMI	CAYNNNNRTG	2 cut(s)	1980, 2040
SmlI	CTYRAG	3 cut(s)	833, 1897, 2231
SmoI	CTYRAG	3 cut(s)	833, 1897, 2231
SpeI	ACTAGT	1 cut(s)	1033
SseBI	AGGCCT	2 cut(s)	454, 1546
SsiI	CCGC	6 cut(s)	368, 646, 980, 1282, 1699, 2054
SspI	AATATT	3 cut(s)	109, 156, 753
SspMI	CTAG	4 cut(s)	353, 1034, 1559, 1665
StuI	AGGCCT	2 cut(s)	454, 1546
StyD4I	CCNGG	5 cut(s)	114, 1046, 1267, 1541, 1998
StyI	CCWWGG	2 cut(s)	1380, 1462
TaaI	ACNGT	3 cut(s)	359, 886, 1277
TaiI	ACGT	2 cut(s)	553, 1243
TaqI	TCGA	1 cut(s)	2086
TaqII	GACCGA	1 cut(s)	1923
TatI	WGTACW	5 cut(s)	439, 816, 1173, 1828, 2005
TauI	GCSGC	1 cut(s)	983
TfiI	GAWTC	3 cut(s)	779, 1852, 2215
TscAI	CASTG	4 cut(s)	297, 1141, 1280, 1675
TseFI	GTSAC	5 cut(s)	215, 797, 1042, 1127, 2263
TseI	GCWGC	5 cut(s)	424, 856, 1574, 1577, 1580
Tsp45I	GTSAC	5 cut(s)	215, 797, 1042, 1127, 2263
TspGWI	ACGGA	2 cut(s)	762, 1315
TspRI	CASTG	4 cut(s)	297, 1141, 1280, 1675
Van91I	CCANNNNNTGG	1 cut(s)	2027
VspI	ATTAAT	1 cut(s)	525
XapI	RAATTY	7 cut(s)	397, 532, 734, 862, 1002, 1402, 1730
XceI	RCATGY	2 cut(s)	446, 1838
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2208
XmnI	GAANNNNTTC	1 cut(s)	2196
XspI	CTAG	4 cut(s)	353, 1034, 1559, 1665
ZrmI	AGTACT	1 cut(s)	818
Zsp2I	ATGCAT	1 cut(s)	1524

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.