RNA helicase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.1G445700_v2.0.a1 Prupe.1G445700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0386401 RchiOBHm_Chr4g0386411 RchiOBHm_Chr4g0386421 |
| rosa_laevigata | RLG00000010164 |
| rosa_multiflora | Rmu_sc0000472.1_g000003 Rmu_sc0001942.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00333900 Rroxscaffold_5G00333930 |
| rosa_rugosa | Rorug03G0306700 Rorug03G0306800 Rorug03G0306900 |
| rosa_samantha | Rh4AG011200 Rh4AG011300 Rh4AG011400 Rh4BG008800 Rh4BG008900 Rh4CG013400 Rh4CG013500 Rh4CG013600 Rh4CG013700 Rh4CG013800 Rh4CG013900 Rh4CG014000 Rh4DG009400 Rh4DG009600 Rh4DG009700 |
| rosa_wichuraiana | Rw4G000060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 88 |
| AciI | CCGC | 1 cut(s) | 88 |
| AcsI | RAATTY | 2 cut(s) | 149, 169 |
| AfaI | GTAC | 1 cut(s) | 56 |
| AgeI | ACCGGT | 1 cut(s) | 289 |
| AgsI | TTSAA | 2 cut(s) | 49, 126 |
| AluBI | AGCT | 3 cut(s) | 93, 226, 271 |
| AluI | AGCT | 3 cut(s) | 93, 226, 271 |
| Alw21I | GWGCWC | 1 cut(s) | 101 |
| Alw44I | GTGCAC | 1 cut(s) | 97 |
| ApaLI | GTGCAC | 1 cut(s) | 97 |
| ApeKI | GCWGC | 1 cut(s) | 163 |
| ApoI | RAATTY | 2 cut(s) | 149, 169 |
| AsiGI | ACCGGT | 1 cut(s) | 289 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 121 |
| BaeGI | GKGCMC | 1 cut(s) | 101 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 32 |
| BbsI | GAAGAC | 1 cut(s) | 264 |
| Bbv12I | GWGCWC | 1 cut(s) | 101 |
| BbvI | GCAGC | 1 cut(s) | 175 |
| BisI | GCNGC | 1 cut(s) | 164 |
| BlsI | GCNGC | 1 cut(s) | 165 |
| BmcAI | AGTACT | 1 cut(s) | 56 |
| BpiI | GAAGAC | 1 cut(s) | 264 |
| BpuEI | CTTGAG | 1 cut(s) | 200 |
| BsaWI | WCCGGW | 1 cut(s) | 289 |
| Bse118I | RCCGGY | 1 cut(s) | 289 |
| Bse1I | ACTGG | 1 cut(s) | 212 |
| BseMII | CTCAG | 1 cut(s) | 351 |
| BseNI | ACTGG | 1 cut(s) | 212 |
| BseSI | GKGCMC | 1 cut(s) | 101 |
| BseXI | GCAGC | 1 cut(s) | 175 |
| BshTI | ACCGGT | 1 cut(s) | 289 |
| BsiHKAI | GWGCWC | 1 cut(s) | 101 |
| BsiSI | CCGG | 2 cut(s) | 290, 306 |
| BsmI | GAATGC | 1 cut(s) | 123 |
| Bsp1286I | GDGCHC | 1 cut(s) | 101 |
| BspACI | CCGC | 1 cut(s) | 88 |
| BspCNI | CTCAG | 1 cut(s) | 350 |
| BspHI | TCATGA | 1 cut(s) | 82 |
| BsrBI | CCGCTC | 1 cut(s) | 88 |
| BsrFI | RCCGGY | 1 cut(s) | 289 |
| BsrI | ACTGG | 1 cut(s) | 212 |
| BssAI | RCCGGY | 1 cut(s) | 289 |
| Bst4CI | ACNGT | 1 cut(s) | 315 |
| BstDEI | CTNAG | 2 cut(s) | 330, 337 |
| BstSLI | GKGCMC | 1 cut(s) | 101 |
| BstV1I | GCAGC | 1 cut(s) | 175 |
| BstV2I | GAAGAC | 1 cut(s) | 264 |
| CciI | TCATGA | 1 cut(s) | 82 |
| Cfr10I | RCCGGY | 1 cut(s) | 289 |
| Csp6I | GTAC | 1 cut(s) | 55 |
| CspAI | ACCGGT | 1 cut(s) | 289 |
| CviAII | CATG | 1 cut(s) | 83 |
| CviJI | RGCY | 3 cut(s) | 93, 226, 271 |
| CviKI_1 | RGCY | 3 cut(s) | 93, 226, 271 |
| CviQI | GTAC | 1 cut(s) | 55 |
| DdeI | CTNAG | 2 cut(s) | 330, 337 |
| DraI | TTTAAA | 1 cut(s) | 319 |
| FaeI | CATG | 1 cut(s) | 86 |
| FaiI | YATR | 5 cut(s) | 84, 107, 156, 194, 296 |
| FatI | CATG | 1 cut(s) | 82 |
| Fnu4HI | GCNGC | 1 cut(s) | 164 |
| Fsp4HI | GCNGC | 1 cut(s) | 164 |
| GluI | GCNGC | 1 cut(s) | 164 |
| HapII | CCGG | 2 cut(s) | 290, 306 |
| Hin1II | CATG | 1 cut(s) | 86 |
| HindIII | AAGCTT | 1 cut(s) | 224 |
| HpaII | CCGG | 2 cut(s) | 290, 306 |
| Hpy166II | GTNNAC | 1 cut(s) | 99 |
| Hpy188I | TCNGA | 3 cut(s) | 116, 147, 202 |
| Hpy188III | TCNNGA | 3 cut(s) | 31, 71, 83 |
| Hpy8I | GTNNAC | 1 cut(s) | 99 |
| HpyCH4III | ACNGT | 1 cut(s) | 315 |
| HpyCH4IV | ACGT | 1 cut(s) | 196 |
| HpyCH4V | TGCA | 3 cut(s) | 99, 131, 250 |
| HpyF3I | CTNAG | 2 cut(s) | 330, 337 |
| HpySE526I | ACGT | 1 cut(s) | 196 |
| Hsp92II | CATG | 1 cut(s) | 86 |
| LmnI | GCTCC | 1 cut(s) | 90 |
| LpnPI | CCDG | 5 cut(s) | 44, 193, 291, 303, 319 |
| Lsp1109I | GCAGC | 1 cut(s) | 175 |
| MaeII | ACGT | 1 cut(s) | 196 |
| MaeIII | GTNAC | 1 cut(s) | 187 |
| MbiI | CCGCTC | 1 cut(s) | 88 |
| MboII | GAAGA | 1 cut(s) | 269 |
| MhlI | GDGCHC | 1 cut(s) | 101 |
| MluCI | AATT | 3 cut(s) | 132, 149, 169 |
| MnlI | CCTC | 1 cut(s) | 70 |
| MroXI | GAANNNNTTC | 1 cut(s) | 121 |
| MseI | TTAA | 3 cut(s) | 221, 267, 318 |
| MspI | CCGG | 2 cut(s) | 290, 306 |
| Mva1269I | GAATGC | 1 cut(s) | 123 |
| NlaIII | CATG | 1 cut(s) | 86 |
| PagI | TCATGA | 1 cut(s) | 82 |
| PctI | GAATGC | 1 cut(s) | 123 |
| PdmI | GAANNNNTTC | 1 cut(s) | 121 |
| PinAI | ACCGGT | 1 cut(s) | 289 |
| PkrI | GCNGC | 1 cut(s) | 165 |
| RsaI | GTAC | 1 cut(s) | 56 |
| RsaNI | GTAC | 1 cut(s) | 55 |
| SaqAI | TTAA | 3 cut(s) | 221, 267, 318 |
| SatI | GCNGC | 1 cut(s) | 164 |
| ScaI | AGTACT | 1 cut(s) | 56 |
| SduI | GDGCHC | 1 cut(s) | 101 |
| SetI | ASST | 6 cut(s) | 81, 95, 199, 228, 248, 273 |
| SmlI | CTYRAG | 1 cut(s) | 179 |
| SmoI | CTYRAG | 1 cut(s) | 179 |
| Sse9I | AATT | 3 cut(s) | 132, 149, 169 |
| SsiI | CCGC | 1 cut(s) | 88 |
| SspI | AATATT | 1 cut(s) | 15 |
| TaaI | ACNGT | 1 cut(s) | 315 |
| TaiI | ACGT | 1 cut(s) | 199 |
| TasI | AATT | 3 cut(s) | 132, 149, 169 |
| TatI | WGTACW | 1 cut(s) | 54 |
| Tru1I | TTAA | 3 cut(s) | 221, 267, 318 |
| Tru9I | TTAA | 3 cut(s) | 221, 267, 318 |
| TseI | GCWGC | 1 cut(s) | 163 |
| TspDTI | ATGAA | 1 cut(s) | 71 |
| VneI | GTGCAC | 1 cut(s) | 97 |
| XapI | RAATTY | 2 cut(s) | 149, 169 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 250 |
| XmnI | GAANNNNTTC | 1 cut(s) | 121 |
| ZrmI | AGTACT | 1 cut(s) | 56 |