Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0005552

Physical Location & Seq

Genomic Coordinates Forward (+)

32598701 .. 32600505

Gene Structure 1805 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0306900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGAGATTAGAGAAGATCACCATGAAGACGATACAACAAGAGCACTCTATGAGGCAGCAGTTGCAGGCTCCGTATCATCTTTGACAAGATTGATCCAGAAAGACCCTCTCATCCTCAACAAAGTTTCACTCACTCACTTCAGCGAAACTCCGCTCCACATCTCAGCTTTGCTCGGCCACCTTCATTTTACCAAAGCTCTTCTTATTCATAACTCGAGACTTGCCCGGGTGAGGGACTCCTTGAGACGCCCTCCGCTCCTCTTGGCATCTGCTGAAGGCCATAAGGAGACGGTCGAAGCTCTTCTGAAAGCCTACCCCGACGCTTGCTTGTTTCGGGATCAAGATGGTAGAGTTCCTCTTCACTACGCCGCAATGAGAGGACATGCTGAGGTTTTAGCTCAGCTGATGTGCGCAAAGCCCGAATCGGTCACATTAAGGGTTCTTGATAGAGGAGACACGGTTTTCCACTTGTGTGTTACATATAACCAATTAGAATGCTTGAAGCTATTGGTGGAGGAAGTAGGAGACAATAATAGAGACGTCCTCAGTGCTAGAGCTGGTTGTGATGGTGGTATAACCATTCTTGAGTTAGCTGTGATGCTAAGGCAAATTGAGACCCTAAGATACTTGCTTTCGCTACCTGTTGTATGGTCAGAAGCAAATGTTGTGCATGGGAAGGTATTAAACATTGTTGAAAATATGCCAAAAGACTTCGTAAGCTTGGAAATTCAACGAGTTTTGATGGATTCTGGTATAATAAGGAATGGAAGGAATGAAAATGAGCAACAACCACTAGTACCAAACAACAAATCAAAGAAAGAAGGAAAAAAGGGAAGGAAAAGTACAAAAAAGGTAAATGAGAAACGCAGTAAGAGTGGGAATTGGGTGGAAGAGAAACGCGGCATGCTCATGGTTGTGGCTACCATGATCTCAACAATGACATTCCAAGCTGCAATTAACCCACCAGGTGGTTTTTGGCAAGAAATCAACACCAATACTGCTTTTCGTGGAGTATCTTATTGCAATGACACAAACCCATGTTTCGTTGGAACTGCAGTGTCAAGCTACATTCATCCAGATTTCTACATTAACTTCCAGACTTACGATACGATCTGCTTCCTTTTCTCTTTGAGCATCACTCTTTTGCTTATAAGCGGATTTCCTCTCCATAAACGAGTGCTTGTGTGGCTCTTATCAGTAGTCATGTGTCTCACTCTCACATTCTTGACATTGACCTTCAATGAAGGTATAAAGATGGTAATACCCAAACGTGTTAATAATGACGATCTTAGCAGTTACGTGGTTATTGGTTCTGTAACATTGTTTTGGGTTCCAATGCTTGGACTGGTGGTTTTATACCACACTATTCGACTTCTCGTTTGGCTGGTCAAGAAGTTGTGGCGCCTAGTCTACCCCAAAAATAAGATGACGAGCAACAGCAACGCAAATCTACTCCAGACTCCCATAAACTCTCATGAGATCAGTTCGTACGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

498

Amino Acids

56.14

Weight (kDa)

8.91

Isoelectric Point (pI)

37.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	16 - 105	1.1e-08	Ankyrin repeats (3 copies)
Ank_2	PF12796	120 - 212	2.5e-10	Ankyrin repeats (3 copies)
PGG	PF13962	294 - 417	7.5e-17	Domain of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005552)

Species	Orthologous Gene IDs
prunus_persica	Prupe.1G445700_v2.0.a1 Prupe.1G445700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0386401 RchiOBHm_Chr4g0386411 RchiOBHm_Chr4g0386421
rosa_laevigata	RLG00000010164
rosa_multiflora	Rmu_sc0000472.1_g000003 Rmu_sc0001942.1_g000001
rosa_roxburghii	Rroxscaffold_5G00333900 Rroxscaffold_5G00333930
rosa_rugosa	Rorug03G0306700 Rorug03G0306800 Rorug03G0306900
rosa_samantha	Rh4AG011200 Rh4AG011300 Rh4AG011400 Rh4BG008800 Rh4BG008900 Rh4CG013400 Rh4CG013500 Rh4CG013600 Rh4CG013700 Rh4CG013800 Rh4CG013900 Rh4CG014000 Rh4DG009400 Rh4DG009600 Rh4DG009700
rosa_wichuraiana	Rw4G000060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1151
AatII	GACGTC	1 cut(s)	543
Acc16I	TGCGCA	1 cut(s)	412
AccB1I	GGYRCC	1 cut(s)	1401
AccB7I	CCANNNNNTGG	2 cut(s)	968, 1340
AccBSI	CCGCTC	2 cut(s)	154, 256
AccI	GTMKAC	1 cut(s)	1410
AccII	CGCG	1 cut(s)	900
AciI	CCGC	5 cut(s)	152, 254, 369, 900, 1155
AclWI	GGATC	2 cut(s)	88, 345
AcoI	YGGCCR	1 cut(s)	175
AcsI	RAATTY	1 cut(s)	726
AcuI	CTGAAG	2 cut(s)	124, 294
AcyI	GRCGYC	3 cut(s)	247, 540, 1402
AdeI	CACNNNGTG	1 cut(s)	968
AfaI	GTAC	3 cut(s)	798, 844, 1490
AfiI	CCNNNNNNNGG	4 cut(s)	231, 232, 968, 1340
AflIII	ACRYGT	1 cut(s)	1270
AgsI	TTSAA	4 cut(s)	502, 695, 731, 1240
AhlI	ACTAGT	1 cut(s)	793
AjnI	CCWGG	1 cut(s)	964
AleI	CACNNNNGTG	1 cut(s)	471
Alw21I	GWGCWC	1 cut(s)	46
Alw26I	GTCTC	8 cut(s)	211, 238, 281, 447, 519, 531, 608, 1214
AlwI	GGATC	2 cut(s)	88, 345
Ama87I	CYCGRG	2 cut(s)	214, 225
AoxI	GGCC	2 cut(s)	175, 277
ApeKI	GCWGC	2 cut(s)	56, 950
ApoI	RAATTY	1 cut(s)	726
ArsI	GACNNNNNNTTYG	2 cut(s)	1362, 1394
Asp700I	GAANNNNTTC	1 cut(s)	300
AspLEI	GCGC	2 cut(s)	413, 1404
AsuC2I	CCSGG	2 cut(s)	226, 227
AsuHPI	GGTGA	2 cut(s)	11, 241
AvaI	CYCGRG	2 cut(s)	214, 225
BanI	GGYRCC	1 cut(s)	1401
BarI	GAAGNNNNNNTAC	2 cut(s)	826, 858
BbsI	GAAGAC	1 cut(s)	33
Bbv12I	GWGCWC	1 cut(s)	46
BbvCI	CCTCAGC	1 cut(s)	387
BbvI	GCAGC	2 cut(s)	68, 937
BccI	CCATC	4 cut(s)	338, 560, 736, 1249
BciT130I	CCWGG	1 cut(s)	966
BcnI	CCSGG	2 cut(s)	226, 227
BcoDI	GTCTC	8 cut(s)	211, 238, 281, 447, 519, 531, 608, 1214
BcuI	ACTAGT	1 cut(s)	793
BfaI	CTAG	3 cut(s)	552, 794, 1406
BfmI	CTRYAG	1 cut(s)	1053
BfoI	RGCGCY	1 cut(s)	1405
BisI	GCNGC	4 cut(s)	57, 369, 901, 951
BlpI	GCTNAGC	1 cut(s)	399
BlsI	GCNGC	4 cut(s)	58, 370, 902, 952
Bme1390I	CCNGG	3 cut(s)	226, 227, 966
BmeT110I	CYCGRG	2 cut(s)	214, 225
BmiI	GGNNCC	3 cut(s)	70, 1332, 1403
BmrFI	CCNGG	3 cut(s)	226, 227, 966
BmsI	GCATC	3 cut(s)	275, 588, 1143
BpiI	GAAGAC	1 cut(s)	33
BplI	GAGNNNNNCTC	6 cut(s)	235, 267, 528, 560, 1123, 1155
BpmI	CTGGAG	1 cut(s)	1439
Bpu10I	CCTNAGC	2 cut(s)	387, 602
Bpu1102I	GCTNAGC	1 cut(s)	399
BpuEI	CTTGAG	2 cut(s)	262, 605
BpuMI	CCSGG	2 cut(s)	226, 227
BsaAI	YACGTR	1 cut(s)	1300
BsaHI	GRCGYC	3 cut(s)	247, 540, 1402
BsaI	GGTCTC	1 cut(s)	608
BsaJI	CCNNGG	1 cut(s)	225
BsaXI	ACNNNNNCTCC	2 cut(s)	444, 474
Bsc4I	CCNNNNNNNGG	4 cut(s)	231, 232, 968, 1340
Bse1I	ACTGG	1 cut(s)	1350
Bse3DI	GCAATG	2 cut(s)	378, 1030
BseBI	CCWGG	1 cut(s)	966
BseDI	CCNNGG	1 cut(s)	225
BseGI	GGATG	2 cut(s)	111, 1072
BseLI	CCNNNNNNNGG	4 cut(s)	231, 232, 968, 1340
BseMI	GCAATG	2 cut(s)	378, 1030
BseMII	CTCAG	4 cut(s)	177, 378, 413, 559
BseNI	ACTGG	1 cut(s)	1350
BseRI	GAGGAG	2 cut(s)	248, 465
BseXI	GCAGC	2 cut(s)	68, 937
Bsh1236I	CGCG	1 cut(s)	900
Bsh1285I	CGRYCG	1 cut(s)	294
BshFI	GGCC	2 cut(s)	177, 279
BshNI	GGYRCC	1 cut(s)	1401
BsiEI	CGRYCG	1 cut(s)	294
BsiHKAI	GWGCWC	1 cut(s)	46
BsiHKCI	CYCGRG	2 cut(s)	214, 225
BsiSI	CCGG	1 cut(s)	226
BsiWI	CGTACG	1 cut(s)	1488
BslFI	GGGAC	1 cut(s)	248
BslI	CCNNNNNNNGG	4 cut(s)	231, 232, 968, 1340
BsmAI	GTCTC	8 cut(s)	211, 238, 281, 447, 519, 531, 608, 1214
BsmBI	CGTCTC	3 cut(s)	238, 281, 531
BsmFI	GGGAC	1 cut(s)	248
BsmI	GAATGC	1 cut(s)	500
BsnI	GGCC	2 cut(s)	177, 279
Bso31I	GGTCTC	1 cut(s)	608
BsoBI	CYCGRG	2 cut(s)	214, 225
Bsp1286I	GDGCHC	1 cut(s)	46
Bsp143I	GATC	7 cut(s)	16, 93, 337, 927, 1110, 1285, 1479
Bsp1720I	GCTNAGC	1 cut(s)	399
BspACI	CCGC	5 cut(s)	152, 254, 369, 900, 1155
BspANI	GGCC	2 cut(s)	177, 279
BspCNI	CTCAG	4 cut(s)	176, 379, 412, 558
BspFNI	CGCG	1 cut(s)	900
BspHI	TCATGA	1 cut(s)	1474
BspLI	GGNNCC	3 cut(s)	70, 1332, 1403
BspMAI	CTGCAG	1 cut(s)	1057
BspPI	GGATC	2 cut(s)	88, 345
BspQI	GCTCTTC	2 cut(s)	204, 306
BspT107I	GGYRCC	1 cut(s)	1401
BspTNI	GGTCTC	1 cut(s)	608
BsrBI	CCGCTC	2 cut(s)	154, 256
BsrDI	GCAATG	2 cut(s)	378, 1030
BsrI	ACTGG	1 cut(s)	1350
BssECI	CCNNGG	1 cut(s)	225
BssMI	GATC	7 cut(s)	16, 93, 337, 927, 1110, 1285, 1479
BssNI	GRCGYC	3 cut(s)	247, 540, 1402
Bst2UI	CCWGG	1 cut(s)	966
Bst4CI	ACNGT	2 cut(s)	292, 460
Bst6I	CTCTTC	4 cut(s)	204, 306, 363, 885
BstACI	GRCGYC	3 cut(s)	247, 540, 1402
BstAPI	GCANNNNNTGC	1 cut(s)	62
BstBAI	YACGTR	1 cut(s)	1300
BstC8I	GCNNGC	3 cut(s)	67, 325, 905
BstDEI	CTNAG	7 cut(s)	163, 387, 399, 545, 602, 620, 1289
BstF5I	GGATG	2 cut(s)	111, 1072
BstFNI	CGCG	1 cut(s)	900
BstH2I	RGCGCY	1 cut(s)	1405
BstHHI	GCGC	2 cut(s)	413, 1404
BstKTI	GATC	7 cut(s)	19, 96, 340, 930, 1113, 1288, 1482
BstMAI	GTCTC	8 cut(s)	211, 238, 281, 447, 519, 531, 608, 1214
BstMBI	GATC	7 cut(s)	16, 93, 337, 927, 1110, 1285, 1479
BstMCI	CGRYCG	1 cut(s)	294
BstMWI	GCNNNNNNNGC	2 cut(s)	62, 1186
BstNI	CCWGG	1 cut(s)	966
BstNSI	RCATGY	2 cut(s)	386, 907
BstSCI	CCNGG	3 cut(s)	224, 225, 964
BstSFI	CTRYAG	1 cut(s)	1053
BstUI	CGCG	1 cut(s)	900
BstV1I	GCAGC	2 cut(s)	68, 937
BstV2I	GAAGAC	1 cut(s)	33
BsuRI	GGCC	2 cut(s)	177, 279
BtsCI	GGATG	2 cut(s)	111, 1072
BtsI	GCAGTG	1 cut(s)	1062
BtsIMutI	CAGTG	2 cut(s)	553, 1062
Cac8I	GCNNGC	3 cut(s)	67, 325, 905
CciI	TCATGA	1 cut(s)	1474
CfoI	GCGC	2 cut(s)	413, 1404
Cfr9I	CCCGGG	1 cut(s)	225
CseI	GACGC	2 cut(s)	255, 329
CsiI	ACCWGGT	1 cut(s)	964
Csp6I	GTAC	3 cut(s)	797, 843, 1489
CviAII	CATG	9 cut(s)	23, 383, 671, 904, 910, 925, 1038, 1204, 1475
CviQI	GTAC	3 cut(s)	797, 843, 1489
DdeI	CTNAG	7 cut(s)	163, 387, 399, 545, 602, 620, 1289
DinI	GGCGCC	1 cut(s)	1403
DpnI	GATC	7 cut(s)	18, 95, 339, 929, 1112, 1287, 1481
DpnII	GATC	7 cut(s)	16, 93, 337, 927, 1110, 1285, 1479
DraIII	CACNNNGTG	1 cut(s)	968
EaeI	YGGCCR	1 cut(s)	175
Eam1104I	CTCTTC	4 cut(s)	204, 306, 363, 885
EarI	CTCTTC	4 cut(s)	204, 306, 363, 885
Eco31I	GGTCTC	1 cut(s)	608
Eco57I	CTGAAG	2 cut(s)	124, 294
Eco88I	CYCGRG	2 cut(s)	214, 225
EcoRII	CCWGG	1 cut(s)	964
EgeI	GGCGCC	1 cut(s)	1403
EheI	GGCGCC	1 cut(s)	1403
Esp3I	CGTCTC	3 cut(s)	238, 281, 531
FaeI	CATG	9 cut(s)	26, 386, 674, 907, 913, 928, 1041, 1207, 1478
FalI	AAGNNNNNCTT	2 cut(s)	186, 218
FaqI	GGGAC	1 cut(s)	248
FatI	CATG	9 cut(s)	22, 382, 670, 903, 909, 924, 1037, 1203, 1474
FblI	GTMKAC	1 cut(s)	1410
Fnu4HI	GCNGC	4 cut(s)	57, 369, 901, 951
FokI	GGATG	2 cut(s)	98, 1059
Fsp4HI	GCNGC	4 cut(s)	57, 369, 901, 951
FspBI	CTAG	3 cut(s)	552, 794, 1406
FspI	TGCGCA	1 cut(s)	412
GlaI	GCGC	2 cut(s)	412, 1403
GluI	GCNGC	4 cut(s)	57, 369, 901, 951
GsuI	CTGGAG	1 cut(s)	1439
HaeII	RGCGCY	1 cut(s)	1405
HaeIII	GGCC	2 cut(s)	177, 279
HapII	CCGG	1 cut(s)	226
HgaI	GACGC	2 cut(s)	255, 329
HhaI	GCGC	2 cut(s)	413, 1404
Hin1I	GRCGYC	3 cut(s)	247, 540, 1402
Hin1II	CATG	9 cut(s)	26, 386, 674, 907, 913, 928, 1041, 1207, 1478
Hin6I	GCGC	2 cut(s)	411, 1402
HinP1I	GCGC	2 cut(s)	411, 1402
HindIII	AAGCTT	1 cut(s)	718
HinfI	GANTC	4 cut(s)	236, 422, 746, 1459
HpaII	CCGG	1 cut(s)	226
HphI	GGTGA	2 cut(s)	11, 241
Hpy166II	GTNNAC	1 cut(s)	1411
Hpy188I	TCNGA	2 cut(s)	306, 655
Hpy8I	GTNNAC	1 cut(s)	1411
Hpy99I	CGWCG	1 cut(s)	323
HpyAV	CCTTC	8 cut(s)	191, 269, 670, 762, 815, 828, 1238, 1246
HpyCH4III	ACNGT	2 cut(s)	292, 460
HpyCH4IV	ACGT	4 cut(s)	540, 1270, 1299, 1491
HpyCH4V	TGCA	5 cut(s)	65, 670, 953, 1023, 1055
HpyF10VI	GCNNNNNNNGC	2 cut(s)	62, 1186
HpyF3I	CTNAG	7 cut(s)	163, 387, 399, 545, 602, 620, 1289
HpySE526I	ACGT	4 cut(s)	540, 1270, 1299, 1491
Hsp92I	GRCGYC	3 cut(s)	247, 540, 1402
Hsp92II	CATG	9 cut(s)	26, 386, 674, 907, 913, 928, 1041, 1207, 1478
HspAI	GCGC	2 cut(s)	411, 1402
KasI	GGCGCC	1 cut(s)	1401
Kzo9I	GATC	7 cut(s)	16, 93, 337, 927, 1110, 1285, 1479
LguI	GCTCTTC	2 cut(s)	204, 306
LmnI	GCTCC	3 cut(s)	74, 159, 261
Lsp1109I	GCAGC	2 cut(s)	68, 937
LweI	GCATC	3 cut(s)	275, 588, 1143
MabI	ACCWGGT	1 cut(s)	964
MaeI	CTAG	3 cut(s)	552, 794, 1406
MaeII	ACGT	4 cut(s)	540, 1270, 1299, 1491
MaeIII	GTNAC	4 cut(s)	427, 475, 1295, 1315
MalI	GATC	7 cut(s)	18, 95, 339, 929, 1112, 1287, 1481
MbiI	CCGCTC	2 cut(s)	154, 256
MboI	GATC	7 cut(s)	16, 93, 337, 927, 1110, 1285, 1479
MboII	GAAGA	6 cut(s)	26, 38, 191, 293, 350, 902
MhlI	GDGCHC	1 cut(s)	46
MluCI	AATT	5 cut(s)	488, 609, 726, 880, 954
Mly113I	GGCGCC	1 cut(s)	1402
MlyI	GAGTC	2 cut(s)	230, 1453
MmeI	TCCRAC	1 cut(s)	1027
MroXI	GAANNNNTTC	1 cut(s)	300
MseI	TTAA	5 cut(s)	434, 683, 957, 1089, 1275
MslI	CAYNNNNRTG	3 cut(s)	471, 908, 914
MspA1I	CMGCKG	1 cut(s)	403
MspI	CCGG	1 cut(s)	226
MspR9I	CCNGG	3 cut(s)	226, 227, 966
Mva1269I	GAATGC	1 cut(s)	500
MvaI	CCWGG	1 cut(s)	966
MvnI	CGCG	1 cut(s)	900
MwoI	GCNNNNNNNGC	2 cut(s)	62, 1186
NarI	GGCGCC	1 cut(s)	1402
NciI	CCSGG	2 cut(s)	226, 227
NdeII	GATC	7 cut(s)	16, 93, 337, 927, 1110, 1285, 1479
NlaIII	CATG	9 cut(s)	26, 386, 674, 907, 913, 928, 1041, 1207, 1478
NlaIV	GGNNCC	3 cut(s)	70, 1332, 1403
NmeAIII	GCCGAG	1 cut(s)	153
NmuCI	GTSAC	1 cut(s)	427
NsbI	TGCGCA	1 cut(s)	412
NspI	RCATGY	2 cut(s)	386, 907
OliI	CACNNNNGTG	1 cut(s)	471
PaeI	GCATGC	1 cut(s)	907
PaeR7I	CTCGAG	1 cut(s)	214
PagI	TCATGA	1 cut(s)	1474
PciSI	GCTCTTC	2 cut(s)	204, 306
PctI	GAATGC	1 cut(s)	500
PdmI	GAANNNNTTC	1 cut(s)	300
PfeI	GAWTC	2 cut(s)	422, 746
Pfl23II	CGTACG	1 cut(s)	1488
PflMI	CCANNNNNTGG	2 cut(s)	968, 1340
PkrI	GCNGC	4 cut(s)	58, 370, 902, 952
PleI	GAGTC	2 cut(s)	230, 1453
PluTI	GGCGCC	1 cut(s)	1405
PpsI	GAGTC	2 cut(s)	230, 1453
Ppu21I	YACGTR	1 cut(s)	1300
PsiI	TTATAA	1 cut(s)	1151
Psp6I	CCWGG	1 cut(s)	964
PspGI	CCWGG	1 cut(s)	964
PspLI	CGTACG	1 cut(s)	1488
PspN4I	GGNNCC	3 cut(s)	70, 1332, 1403
PstI	CTGCAG	1 cut(s)	1057
PvuII	CAGCTG	1 cut(s)	403
RsaI	GTAC	3 cut(s)	798, 844, 1490
RsaNI	GTAC	3 cut(s)	797, 843, 1489
RseI	CAYNNNNRTG	3 cut(s)	471, 908, 914
SapI	GCTCTTC	2 cut(s)	204, 306
SaqAI	TTAA	5 cut(s)	434, 683, 957, 1089, 1275
SatI	GCNGC	4 cut(s)	57, 369, 901, 951
Sau3AI	GATC	7 cut(s)	16, 93, 337, 927, 1110, 1285, 1479
SchI	GAGTC	2 cut(s)	230, 1453
ScrFI	CCNGG	3 cut(s)	226, 227, 966
SduI	GDGCHC	1 cut(s)	46
SexAI	ACCWGGT	1 cut(s)	964
SfaNI	GCATC	3 cut(s)	275, 588, 1143
SfcI	CTRYAG	1 cut(s)	1053
SfoI	GGCGCC	1 cut(s)	1403
Sfr274I	CTCGAG	1 cut(s)	214
SlaI	CTCGAG	1 cut(s)	214
SmaI	CCCGGG	1 cut(s)	227
SmiMI	CAYNNNNRTG	3 cut(s)	471, 908, 914
SmlI	CTYRAG	3 cut(s)	214, 241, 584
SmoI	CTYRAG	3 cut(s)	214, 241, 584
SpeI	ACTAGT	1 cut(s)	793
SphI	GCATGC	1 cut(s)	907
Sse9I	AATT	5 cut(s)	488, 609, 726, 880, 954
SsiI	CCGC	5 cut(s)	152, 254, 369, 900, 1155
SspDI	GGCGCC	1 cut(s)	1401
SspMI	CTAG	3 cut(s)	552, 794, 1406
StyD4I	CCNGG	3 cut(s)	224, 225, 964
TaaI	ACNGT	2 cut(s)	292, 460
TaiI	ACGT	4 cut(s)	543, 1273, 1302, 1494
TaqI	TCGA	3 cut(s)	215, 294, 1369
TaqII	GACCGA	1 cut(s)	415
TasI	AATT	5 cut(s)	488, 609, 726, 880, 954
TatI	WGTACW	1 cut(s)	842
TauI	GCSGC	2 cut(s)	371, 903
TfiI	GAWTC	2 cut(s)	422, 746
Tru1I	TTAA	5 cut(s)	434, 683, 957, 1089, 1275
Tru9I	TTAA	5 cut(s)	434, 683, 957, 1089, 1275
TscAI	CASTG	2 cut(s)	553, 1062
TseFI	GTSAC	1 cut(s)	427
TseI	GCWGC	2 cut(s)	56, 950
Tsp45I	GTSAC	1 cut(s)	427
TspDTI	ATGAA	6 cut(s)	39, 173, 197, 789, 1061, 1257
TspGWI	ACGGA	1 cut(s)	61
TspMI	CCCGGG	1 cut(s)	225
TspRI	CASTG	2 cut(s)	553, 1062
Van91I	CCANNNNNTGG	2 cut(s)	968, 1340
XapI	RAATTY	1 cut(s)	726
XceI	RCATGY	2 cut(s)	386, 907
XcmI	CCANNNNNNNNNTGG	1 cut(s)	972
XhoI	CTCGAG	1 cut(s)	214
XmaI	CCCGGG	1 cut(s)	225
XmiI	GTMKAC	1 cut(s)	1410
XmnI	GAANNNNTTC	1 cut(s)	300
XspI	CTAG	3 cut(s)	552, 794, 1406
ZraI	GACGTC	1 cut(s)	541

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.