Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0003235

Physical Location & Seq

Genomic Coordinates Forward (+)

7753183 .. 7757806

Gene Structure 4624 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G061100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 930 bp

ATGGCAATAACACTGAACAATGGGTTCAAAATGCCAGCAGTCGGTCTTGGTGTTTGGCGCATGGAAGGAAAAGAAATCAGAGACCTCATTATCAATGCCATCAACATTGGTTACCGCCATTTTGATTGCGCTGCTGATTACAAAAATGAAGCAGAAGTAGGGGAGGCACTTGCAGGAGCATTTTCGACTGGGCTTGTTAAGCGAGAGGATCTCTTCATCACCACCAAGCTTTGGAATTCAGATCATGGACATGTCGTAGAGGCCTGTAAAGACAGTCTGAAGAAGCTTCGGTTGGATTATCTGGATCTATACCTTGTTCACTTTCCTGTTGCCACCAAGCATACTGGAGTTGGTGCAACTGCAAGTGCTTTGGATGAGGATGGGGTGCTAGAAATAGACACAACCATATCTTTGGAAACTACCTGGCATGCTATGGAAGAATTGGTTTCTATGGGTTTAGTTCGTAGCATTGGGATTAGTAACTATGACATCTTTCTAACAAGAGATTGCTTAGCCTATTCCAAAGTGAAGCCTGCTGTGAATCAGATTGAAACTCACCCATACTTCCAACGTGATTCTCTTGTCAAATTCTGTCAGAAGCATGGCATCTGTGTCACAGCCCACACTCCTCTTGGAGGTGCTGCGGCCAACAGCGAATTGTTTGGTTCAGTTTCATGTCTGGATGATCCAGTTCTTAAGAGTCTGGCTGAGAAATACAAAAAGACTGTAGCCCAGGTTGTCCTTTGCTGGGGCATCCAACGCAACACAGTTGTCATCCCAAAGACATCAAAACTTGAGAGATTGAACGAGAATTTCCAAGTTTTTGACTTTGAGCTTACGAAAGAGGAAATGGACCTGATTAAAAAGGTAGACAGGAAACACCGGACAAATCAGCCTGCCAAGTTTTGGGGCATTGATCTGTATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00010 ko00040 ko00051 ko00052 ko00561 ko00790 ko00930 ko01100 ko01110 ko01120 ko01130 ko01220 map00010 map00040 map00051 map00052 map00561 map00790 map00930 map01100 map01110 map01120 map01130 map01220

Pfam Domains

Protein Families

Aldo_ket_red

Protein Analysis

310

Amino Acids

34.59

Weight (kDa)

6.21

Isoelectric Point (pI)

23.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003235)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21250 AT2G21250 AT2G21260 AT2G21260
fragaria_vesca	FvH4_2g10630
malus_domestica	MD02G1264100.v1.1 MD02G1264600.v1.1 MD05G1054800.v1.1 MD07G1054400.v1.1 MD10G1062300.v1.1
prunus_persica	Prupe.2G061100_v2.0.a1 Prupe.2G061100_v2.0.a1 Prupe.8G083400_v2.0.a1 Prupe.8G083400_v2.0.a1
pyrus_communis	pycom02g22620 pycom05g04500 pycom07g04220
rosa_chinensis	RchiOBHm_Chr6g0268271 RchiOBHm_Chr6g0268301
rosa_laevigata	RLG00000013919 RLG00000013921
rosa_multiflora	Rmu_sc0009812.1_g000006 Rmu_sc0010202.1_g000007 Rmu_sc0010202.1_g000010
rosa_roxburghii	Rroxscaffold_7G00199870 Rroxscaffold_7G00199910
rosa_rugosa	Rorug06G0040400 Rorug06G0040400
rosa_samantha	Rh6AG160400 Rh6BG164500 Rh6BG164700 Rh6CG153700 Rh6CG153800 Rh6DG150200 Rh6DG150500
rosa_wichuraiana	Rw6G013860 Rw6G013870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	231, 906
AccI	GTMKAC	1 cut(s)	870
AciI	CCGC	2 cut(s)	115, 644
AclWI	GGATC	3 cut(s)	216, 312, 680
AcoI	YGGCCR	1 cut(s)	645
AcsI	RAATTY	3 cut(s)	235, 587, 811
AcuI	CTGAAG	1 cut(s)	299
AfiI	CCNNNNNNNGG	5 cut(s)	41, 231, 635, 748, 906
AflII	CTTAAG	1 cut(s)	695
AflIII	ACRYGT	1 cut(s)	250
AgsI	TTSAA	3 cut(s)	28, 551, 805
AjnI	CCWGG	2 cut(s)	422, 732
AjuI	GAANNNNNNNTTGG	2 cut(s)	275, 307
AluBI	AGCT	3 cut(s)	229, 286, 835
AluI	AGCT	3 cut(s)	229, 286, 835
Alw26I	GTCTC	1 cut(s)	75
AlwI	GGATC	3 cut(s)	216, 312, 680
AoxI	GGCC	2 cut(s)	261, 645
ApeKI	GCWGC	2 cut(s)	131, 641
ApoI	RAATTY	3 cut(s)	235, 587, 811
AspLEI	GCGC	2 cut(s)	60, 131
AspS9I	GGNCC	1 cut(s)	853
AsuHPI	GGTGA	2 cut(s)	211, 548
AvaII	GGWCC	1 cut(s)	853
BbvI	GCAGC	2 cut(s)	118, 628
BccI	CCATC	2 cut(s)	107, 374
BciT130I	CCWGG	2 cut(s)	424, 734
BcoDI	GTCTC	1 cut(s)	75
BfaI	CTAG	1 cut(s)	389
BfmI	CTRYAG	1 cut(s)	726
BfrI	CTTAAG	1 cut(s)	695
BisI	GCNGC	3 cut(s)	132, 642, 645
BlpI	GCTNAGC	1 cut(s)	511
BlsI	GCNGC	3 cut(s)	133, 643, 646
Bme1390I	CCNGG	2 cut(s)	424, 734
Bme18I	GGWCC	1 cut(s)	853
BmgT120I	GGNCC	1 cut(s)	853
BmrFI	CCNGG	2 cut(s)	424, 734
BmrI	ACTGGG	1 cut(s)	198
BmsI	GCATC	2 cut(s)	615, 762
BmuI	ACTGGG	1 cut(s)	198
BplI	GAGNNNNNCTC	2 cut(s)	195, 227
BpmI	CTGGAG	1 cut(s)	366
Bpu1102I	GCTNAGC	1 cut(s)	511
BpuEI	CTTGAG	1 cut(s)	815
BsaI	GGTCTC	1 cut(s)	75
BsaJI	CCNNGG	1 cut(s)	732
BsaWI	WCCGGW	1 cut(s)	882
Bsc4I	CCNNNNNNNGG	5 cut(s)	41, 231, 635, 748, 906
Bse1I	ACTGG	3 cut(s)	193, 349, 689
BseBI	CCWGG	2 cut(s)	424, 734
BseDI	CCNNGG	1 cut(s)	732
BseGI	GGATG	5 cut(s)	379, 385, 688, 753, 774
BseLI	CCNNNNNNNGG	5 cut(s)	41, 231, 635, 748, 906
BseMII	CTCAG	1 cut(s)	699
BseNI	ACTGG	3 cut(s)	193, 349, 689
BseRI	GAGGAG	1 cut(s)	618
BseXI	GCAGC	2 cut(s)	118, 628
BseYI	CCCAGC	1 cut(s)	747
BshFI	GGCC	2 cut(s)	263, 647
BsiSI	CCGG	1 cut(s)	883
BslI	CCNNNNNNNGG	5 cut(s)	41, 231, 635, 748, 906
BsmAI	GTCTC	1 cut(s)	75
BsnI	GGCC	2 cut(s)	263, 647
Bso31I	GGTCTC	1 cut(s)	75
Bsp143I	GATC	5 cut(s)	208, 241, 304, 685, 916
Bsp1720I	GCTNAGC	1 cut(s)	511
BspACI	CCGC	2 cut(s)	115, 644
BspANI	GGCC	2 cut(s)	263, 647
BspCNI	CTCAG	1 cut(s)	700
BspPI	GGATC	3 cut(s)	216, 312, 680
BspTI	CTTAAG	1 cut(s)	695
BspTNI	GGTCTC	1 cut(s)	75
BsrI	ACTGG	3 cut(s)	193, 349, 689
BssECI	CCNNGG	1 cut(s)	732
BssMI	GATC	5 cut(s)	208, 241, 304, 685, 916
Bst2UI	CCWGG	2 cut(s)	424, 734
Bst4CI	ACNGT	3 cut(s)	275, 727, 769
Bst6I	CTCTTC	1 cut(s)	218
BstAFI	CTTAAG	1 cut(s)	695
BstC8I	GCNNGC	4 cut(s)	36, 429, 534, 897
BstDEI	CTNAG	2 cut(s)	511, 708
BstEII	GGTNACC	1 cut(s)	110
BstENI	CCTNNNNNAGG	1 cut(s)	633
BstF5I	GGATG	5 cut(s)	379, 385, 688, 753, 774
BstHHI	GCGC	2 cut(s)	60, 131
BstKTI	GATC	5 cut(s)	211, 244, 307, 688, 919
BstMAI	GTCTC	1 cut(s)	75
BstMBI	GATC	5 cut(s)	208, 241, 304, 685, 916
BstMWI	GCNNNNNNNGC	2 cut(s)	199, 759
BstNI	CCWGG	2 cut(s)	424, 734
BstNSI	RCATGY	2 cut(s)	254, 431
BstPI	GGTNACC	1 cut(s)	110
BstSCI	CCNGG	2 cut(s)	422, 732
BstSFI	CTRYAG	1 cut(s)	726
BstV1I	GCAGC	2 cut(s)	118, 628
BstX2I	RGATCY	2 cut(s)	208, 304
BstXI	CCANNNNNNTGG	1 cut(s)	412
BstYI	RGATCY	2 cut(s)	208, 304
BsuRI	GGCC	2 cut(s)	263, 647
BtsCI	GGATG	5 cut(s)	379, 385, 688, 753, 774
BtsIMutI	CAGTG	1 cut(s)	11
Cac8I	GCNNGC	4 cut(s)	36, 429, 534, 897
CfoI	GCGC	2 cut(s)	60, 131
Cfr13I	GGNCC	1 cut(s)	853
CviAII	CATG	6 cut(s)	61, 245, 251, 428, 602, 675
DdeI	CTNAG	2 cut(s)	511, 708
DpnI	GATC	5 cut(s)	210, 243, 306, 687, 918
DpnII	GATC	5 cut(s)	208, 241, 304, 685, 916
EaeI	YGGCCR	1 cut(s)	645
Eam1104I	CTCTTC	1 cut(s)	218
EarI	CTCTTC	1 cut(s)	218
Eco147I	AGGCCT	1 cut(s)	263
Eco31I	GGTCTC	1 cut(s)	75
Eco47I	GGWCC	1 cut(s)	853
Eco57I	CTGAAG	1 cut(s)	299
Eco91I	GGTNACC	1 cut(s)	110
EcoNI	CCTNNNNNAGG	1 cut(s)	633
EcoO65I	GGTNACC	1 cut(s)	110
EcoRI	GAATTC	1 cut(s)	235
EcoRII	CCWGG	2 cut(s)	422, 732
EcoT22I	ATGCAT	1 cut(s)	928
FaeI	CATG	6 cut(s)	64, 248, 254, 431, 605, 678
FatI	CATG	6 cut(s)	60, 244, 250, 427, 601, 674
FblI	GTMKAC	1 cut(s)	870
Fnu4HI	GCNGC	3 cut(s)	132, 642, 645
FokI	GGATG	5 cut(s)	386, 392, 695, 740, 761
Fsp4HI	GCNGC	3 cut(s)	132, 642, 645
FspBI	CTAG	1 cut(s)	389
GlaI	GCGC	2 cut(s)	59, 130
GluI	GCNGC	3 cut(s)	132, 642, 645
GsaI	CCCAGC	1 cut(s)	751
GsuI	CTGGAG	1 cut(s)	366
HaeIII	GGCC	2 cut(s)	263, 647
HapII	CCGG	1 cut(s)	883
HhaI	GCGC	2 cut(s)	60, 131
Hin1II	CATG	6 cut(s)	64, 248, 254, 431, 605, 678
Hin6I	GCGC	2 cut(s)	58, 129
HinP1I	GCGC	2 cut(s)	58, 129
HindIII	AAGCTT	2 cut(s)	227, 284
HinfI	GANTC	3 cut(s)	541, 575, 700
HpaII	CCGG	1 cut(s)	883
HphI	GGTGA	2 cut(s)	211, 548
Hpy166II	GTNNAC	2 cut(s)	319, 871
Hpy188I	TCNGA	5 cut(s)	80, 241, 279, 546, 597
Hpy188III	TCNNGA	2 cut(s)	302, 680
Hpy8I	GTNNAC	2 cut(s)	319, 871
HpyAV	CCTTC	1 cut(s)	59
HpyCH4III	ACNGT	3 cut(s)	275, 727, 769
HpyCH4IV	ACGT	1 cut(s)	571
HpyCH4V	TGCA	4 cut(s)	173, 356, 362, 926
HpyF10VI	GCNNNNNNNGC	2 cut(s)	199, 759
HpyF3I	CTNAG	2 cut(s)	511, 708
HpySE526I	ACGT	1 cut(s)	571
Hsp92II	CATG	6 cut(s)	64, 248, 254, 431, 605, 678
HspAI	GCGC	2 cut(s)	58, 129
Kzo9I	GATC	5 cut(s)	208, 241, 304, 685, 916
LmnI	GCTCC	1 cut(s)	176
Lsp1109I	GCAGC	2 cut(s)	118, 628
LweI	GCATC	2 cut(s)	615, 762
MaeI	CTAG	1 cut(s)	389
MaeII	ACGT	1 cut(s)	571
MaeIII	GTNAC	3 cut(s)	110, 479, 613
MalI	GATC	5 cut(s)	210, 243, 306, 687, 918
MboI	GATC	5 cut(s)	208, 241, 304, 685, 916
MboII	GAAGA	3 cut(s)	205, 292, 449
MflI	RGATCY	2 cut(s)	208, 304
MluCI	AATT	5 cut(s)	235, 440, 587, 656, 811
MlyI	GAGTC	1 cut(s)	709
MmeI	TCCRAC	3 cut(s)	273, 592, 781
MnlI	CCTC	8 cut(s)	95, 157, 199, 253, 370, 629, 639, 838
Mph1103I	ATGCAT	1 cut(s)	928
MseI	TTAA	3 cut(s)	198, 696, 861
MslI	CAYNNNNRTG	1 cut(s)	249
MspCI	CTTAAG	1 cut(s)	695
MspI	CCGG	1 cut(s)	883
MspR9I	CCNGG	2 cut(s)	424, 734
MvaI	CCWGG	2 cut(s)	424, 734
MwoI	GCNNNNNNNGC	2 cut(s)	199, 759
NdeII	GATC	5 cut(s)	208, 241, 304, 685, 916
NlaIII	CATG	6 cut(s)	64, 248, 254, 431, 605, 678
NmuCI	GTSAC	1 cut(s)	613
NsiI	ATGCAT	1 cut(s)	928
NspI	RCATGY	2 cut(s)	254, 431
PaeI	GCATGC	1 cut(s)	431
PceI	AGGCCT	1 cut(s)	263
PciI	ACATGT	1 cut(s)	250
PfeI	GAWTC	2 cut(s)	541, 575
PflMI	CCANNNNNTGG	2 cut(s)	231, 906
PkrI	GCNGC	3 cut(s)	133, 643, 646
PleI	GAGTC	1 cut(s)	708
PpsI	GAGTC	1 cut(s)	708
PscI	ACATGT	1 cut(s)	250
Psp6I	CCWGG	2 cut(s)	422, 732
PspEI	GGTNACC	1 cut(s)	110
PspFI	CCCAGC	1 cut(s)	747
PspGI	CCWGG	2 cut(s)	422, 732
PspPI	GGNCC	1 cut(s)	853
PsuI	RGATCY	2 cut(s)	208, 304
RseI	CAYNNNNRTG	1 cut(s)	249
SaqAI	TTAA	3 cut(s)	198, 696, 861
SatI	GCNGC	3 cut(s)	132, 642, 645
Sau3AI	GATC	5 cut(s)	208, 241, 304, 685, 916
Sau96I	GGNCC	1 cut(s)	853
SchI	GAGTC	1 cut(s)	709
ScrFI	CCNGG	2 cut(s)	424, 734
SfaNI	GCATC	2 cut(s)	615, 762
SfcI	CTRYAG	1 cut(s)	726
SinI	GGWCC	1 cut(s)	853
SmiMI	CAYNNNNRTG	1 cut(s)	249
SmlI	CTYRAG	2 cut(s)	695, 794
SmoI	CTYRAG	2 cut(s)	695, 794
SphI	GCATGC	1 cut(s)	431
Sse9I	AATT	5 cut(s)	235, 440, 587, 656, 811
SseBI	AGGCCT	1 cut(s)	263
SsiI	CCGC	2 cut(s)	115, 644
SspMI	CTAG	1 cut(s)	389
StuI	AGGCCT	1 cut(s)	263
StyD4I	CCNGG	2 cut(s)	422, 732
TaaI	ACNGT	3 cut(s)	275, 727, 769
TaiI	ACGT	1 cut(s)	574
TaqI	TCGA	1 cut(s)	185
TaqII	GACCGA	1 cut(s)	32
TasI	AATT	5 cut(s)	235, 440, 587, 656, 811
TauI	GCSGC	1 cut(s)	647
TfiI	GAWTC	2 cut(s)	541, 575
Tru1I	TTAA	3 cut(s)	198, 696, 861
Tru9I	TTAA	3 cut(s)	198, 696, 861
TscAI	CASTG	1 cut(s)	18
TseFI	GTSAC	1 cut(s)	613
TseI	GCWGC	2 cut(s)	131, 641
Tsp45I	GTSAC	1 cut(s)	613
TspDTI	ATGAA	3 cut(s)	162, 205, 663
TspRI	CASTG	1 cut(s)	18
Van91I	CCANNNNNTGG	2 cut(s)	231, 906
Vha464I	CTTAAG	1 cut(s)	695
VpaK11BI	GGWCC	1 cut(s)	853
XagI	CCTNNNNNAGG	1 cut(s)	633
XapI	RAATTY	3 cut(s)	235, 587, 811
XceI	RCATGY	2 cut(s)	254, 431
XcmI	CCANNNNNNNNNTGG	1 cut(s)	629
XmiI	GTMKAC	1 cut(s)	870
XspI	CTAG	1 cut(s)	389
Zsp2I	ATGCAT	1 cut(s)	928

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.