Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0004032

Physical Location & Seq

Genomic Coordinates Reverse (-)

17258792 .. 17261296

Gene Structure 2505 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G114700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 603 bp

ATGCATTTACTCAGAGGTAGTCTCGTATCAATGGCGATACATACACAAACGCACACCACCTTCGGCTTCAATCTGGGTTCAACCAGAGCACAACAGCCACCACAAAACGCTTCCCTGTCCTGCGTTTTGGCTTCGCATTTTGCCGATTCCAGTCCCAGAAGAATCCTGAGTGTATCAAAGAAGAGGAGGGCAACAGTGTCTTTTGTGGATTCAGATGATAAGGCTTCTGGGTTTCATGGCCCCAAACCTTCTGAAGTTTATGGCTTTGTTGGTTCCATCACAACTGTTGTGGCTACAGTTATTTTCTTGGTGTGGGCATATGTTCCAGAGTCTTGGCTACATTCCATTGGGATATTTTACTATCCCAGCAGGTATTGGGCATTGGCAGTGCCAGCTTATGCTATGATGACAGTGGTATTAGCTTTGGGATTTTATTGTGGCGTCAACTTCATGTCCACTCCTCCCCCATCTTCCTTATATACTGTATATGATGAATTCAGTAGAGATCCTTTGAGCTCTGTTCCAATGGGGGGTGATGATCAGCCCATAGAACCTATATCCGATATCAGTATCGACAGAATCAACCGTTCGATGTTTAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0012505 GO:0016020 GO:0031984 GO:0032991 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0098796 GO:0098827 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00563 ko01100 map00563 map01100

Pfam Domains

Protein Families

PIG-P

Protein Analysis

201

Amino Acids

22.04

Weight (kDa)

7.82

Isoelectric Point (pI)

53.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004032)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61280 AT1G61280 AT2G39445 AT2G39445 AT2G39445
fragaria_vesca	FvH4_5g29260 FvH4_7g08700
malus_domestica	MD02G1225800.v1.1 MD07G1088000.v1.1
prunus_persica	Prupe.2G114700_v2.0.a1 Prupe.2G114700_v2.0.a1 Prupe.2G114700_v2.0.a1
pyrus_communis	pycom02g19450
rosa_chinensis	RchiOBHm_Chr1g0343921 RchiOBHm_Chr5g0055501
rosa_laevigata	RLG00000028948 RLG00000034992
rosa_multiflora	Rmu_sc0001673.1_g000037 Rmu_sc0007032.1_g000003 Rmu_sc0007696.1_g000023 Rmu_sc0016880.1_g000001 Rmu_ssc0000434.1_g000070
rosa_roxburghii	Rroxscaffold_4G00310290
rosa_rugosa	Rorug01G0169400 Rorug05G0293300
rosa_samantha	Rh1AG185900 Rh1BG125300 Rh1DG184700 Rh5AG362900 Rh6BG211800
rosa_wichuraiana	Rw1G015330 Rw1G015370 Rw5G034160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	360
AclWI	GGATC	1 cut(s)	500
AcsI	RAATTY	1 cut(s)	494
AcuI	CTGAAG	1 cut(s)	273
AcyI	GRCGYC	1 cut(s)	441
AfiI	CCNNNNNNNGG	1 cut(s)	530
AgsI	TTSAA	2 cut(s)	70, 81
AluBI	AGCT	3 cut(s)	395, 422, 516
AluI	AGCT	3 cut(s)	395, 422, 516
Alw21I	GWGCWC	2 cut(s)	91, 518
Alw26I	GTCTC	1 cut(s)	26
AlwI	GGATC	1 cut(s)	500
AoxI	GGCC	1 cut(s)	238
ApoI	RAATTY	1 cut(s)	494
AspS9I	GGNCC	1 cut(s)	239
AsuHPI	GGTGA	1 cut(s)	545
BanII	GRGCYC	1 cut(s)	518
Bbv12I	GWGCWC	2 cut(s)	91, 518
BccI	CCATC	2 cut(s)	284, 475
BclI	TGATCA	1 cut(s)	538
BcoDI	GTCTC	1 cut(s)	26
BfmI	CTRYAG	1 cut(s)	294
BfuAI	ACCTGC	1 cut(s)	360
BmgT120I	GGNCC	1 cut(s)	239
BmiI	GGNNCC	2 cut(s)	241, 274
BplI	GAGNNNNNCTC	1 cut(s)	38
BsaHI	GRCGYC	1 cut(s)	441
Bsc4I	CCNNNNNNNGG	1 cut(s)	530
Bse1I	ACTGG	1 cut(s)	150
BseLI	CCNNNNNNNGG	1 cut(s)	530
BseMII	CTCAG	2 cut(s)	25, 158
BseNI	ACTGG	1 cut(s)	150
BseRI	GAGGAG	2 cut(s)	199, 450
BseYI	CCCAGC	1 cut(s)	365
BshFI	GGCC	1 cut(s)	240
BsiHKAI	GWGCWC	2 cut(s)	91, 518
BslFI	GGGAC	1 cut(s)	138
BslI	CCNNNNNNNGG	1 cut(s)	530
BsmAI	GTCTC	1 cut(s)	26
BsmFI	GGGAC	1 cut(s)	138
BsnI	GGCC	1 cut(s)	240
Bsp1286I	GDGCHC	2 cut(s)	91, 518
Bsp143I	GATC	2 cut(s)	505, 538
BspANI	GGCC	1 cut(s)	240
BspCNI	CTCAG	2 cut(s)	24, 159
BspLI	GGNNCC	2 cut(s)	241, 274
BspMI	ACCTGC	1 cut(s)	360
BspPI	GGATC	1 cut(s)	500
BsrI	ACTGG	1 cut(s)	150
BssMI	GATC	2 cut(s)	505, 538
BssNI	GRCGYC	1 cut(s)	441
Bst4CI	ACNGT	6 cut(s)	196, 286, 298, 412, 484, 587
Bst6I	CTCTTC	1 cut(s)	176
BstACI	GRCGYC	1 cut(s)	441
BstC8I	GCNNGC	1 cut(s)	393
BstDEI	CTNAG	2 cut(s)	11, 167
BstKTI	GATC	2 cut(s)	508, 541
BstMAI	GTCTC	1 cut(s)	26
BstMBI	GATC	2 cut(s)	505, 538
BstMWI	GCNNNNNNNGC	1 cut(s)	392
BstSFI	CTRYAG	1 cut(s)	294
BstX2I	RGATCY	1 cut(s)	505
BstXI	CCANNNNNNTGG	1 cut(s)	333
BstYI	RGATCY	1 cut(s)	505
BsuRI	GGCC	1 cut(s)	240
BtsI	GCAGTG	1 cut(s)	393
BtsIMutI	CAGTG	3 cut(s)	201, 393, 417
BveI	ACCTGC	1 cut(s)	360
Cac8I	GCNNGC	1 cut(s)	393
Cfr13I	GGNCC	1 cut(s)	239
CseI	GACGC	1 cut(s)	430
CspCI	CAANNNNNGTGG	2 cut(s)	270, 305
CviAII	CATG	2 cut(s)	236, 451
DdeI	CTNAG	2 cut(s)	11, 167
DpnI	GATC	2 cut(s)	507, 540
DpnII	GATC	2 cut(s)	505, 538
DraI	TTTAAA	1 cut(s)	598
Eam1104I	CTCTTC	1 cut(s)	176
EarI	CTCTTC	1 cut(s)	176
Ecl136II	GAGCTC	1 cut(s)	516
Eco24I	GRGCYC	1 cut(s)	518
Eco32I	GATATC	1 cut(s)	565
Eco53kI	GAGCTC	1 cut(s)	516
Eco57I	CTGAAG	1 cut(s)	273
EcoICRI	GAGCTC	1 cut(s)	516
EcoRI	GAATTC	1 cut(s)	494
EcoRV	GATATC	1 cut(s)	565
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	518
FaeI	CATG	2 cut(s)	239, 454
FaqI	GGGAC	1 cut(s)	138
FatI	CATG	2 cut(s)	235, 450
FauNDI	CATATG	1 cut(s)	319
FbaI	TGATCA	1 cut(s)	538
FriOI	GRGCYC	1 cut(s)	518
GsaI	CCCAGC	1 cut(s)	369
HaeIII	GGCC	1 cut(s)	240
HgaI	GACGC	1 cut(s)	430
Hin1I	GRCGYC	1 cut(s)	441
Hin1II	CATG	2 cut(s)	239, 454
HincII	GTYRAC	1 cut(s)	445
HindII	GTYRAC	1 cut(s)	445
HinfI	GANTC	5 cut(s)	146, 162, 209, 329, 579
HphI	GGTGA	1 cut(s)	545
Hpy166II	GTNNAC	2 cut(s)	445, 456
Hpy188I	TCNGA	4 cut(s)	14, 214, 253, 562
Hpy188III	TCNNGA	2 cut(s)	166, 326
Hpy8I	GTNNAC	2 cut(s)	445, 456
HpyAV	CCTTC	2 cut(s)	70, 258
HpyCH4III	ACNGT	6 cut(s)	196, 286, 298, 412, 484, 587
HpyCH4V	TGCA	1 cut(s)	4
HpyF10VI	GCNNNNNNNGC	1 cut(s)	392
HpyF3I	CTNAG	2 cut(s)	11, 167
Hsp92I	GRCGYC	1 cut(s)	441
Hsp92II	CATG	2 cut(s)	239, 454
Ksp22I	TGATCA	1 cut(s)	538
Kzo9I	GATC	2 cut(s)	505, 538
MalI	GATC	2 cut(s)	507, 540
MboI	GATC	2 cut(s)	505, 538
MboII	GAAGA	3 cut(s)	171, 193, 462
MflI	RGATCY	1 cut(s)	505
MhlI	GDGCHC	2 cut(s)	91, 518
MluCI	AATT	1 cut(s)	494
MlyI	GAGTC	1 cut(s)	338
MnlI	CCTC	4 cut(s)	8, 177, 180, 471
Mph1103I	ATGCAT	1 cut(s)	6
MseI	TTAA	1 cut(s)	597
MwoI	GCNNNNNNNGC	1 cut(s)	392
NdeI	CATATG	1 cut(s)	319
NdeII	GATC	2 cut(s)	505, 538
NlaIII	CATG	2 cut(s)	239, 454
NlaIV	GGNNCC	2 cut(s)	241, 274
NsiI	ATGCAT	1 cut(s)	6
PfeI	GAWTC	4 cut(s)	146, 162, 209, 579
PleI	GAGTC	1 cut(s)	337
PpsI	GAGTC	1 cut(s)	337
Psp124BI	GAGCTC	1 cut(s)	518
PspFI	CCCAGC	1 cut(s)	365
PspN4I	GGNNCC	2 cut(s)	241, 274
PspPI	GGNCC	1 cut(s)	239
PsuI	RGATCY	1 cut(s)	505
SacI	GAGCTC	1 cut(s)	518
SaqAI	TTAA	1 cut(s)	597
Sau3AI	GATC	2 cut(s)	505, 538
Sau96I	GGNCC	1 cut(s)	239
SchI	GAGTC	1 cut(s)	338
SduI	GDGCHC	2 cut(s)	91, 518
SetI	ASST	8 cut(s)	19, 62, 250, 374, 397, 424, 518, 556
SfcI	CTRYAG	1 cut(s)	294
Sse9I	AATT	1 cut(s)	494
SstI	GAGCTC	1 cut(s)	518
TaaI	ACNGT	6 cut(s)	196, 286, 298, 412, 484, 587
TaqI	TCGA	2 cut(s)	573, 590
TasI	AATT	1 cut(s)	494
TfiI	GAWTC	4 cut(s)	146, 162, 209, 579
Tru1I	TTAA	1 cut(s)	597
Tru9I	TTAA	1 cut(s)	597
TscAI	CASTG	3 cut(s)	201, 393, 417
TspDTI	ATGAA	3 cut(s)	224, 439, 507
TspRI	CASTG	3 cut(s)	201, 393, 417
XapI	RAATTY	1 cut(s)	494
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.