Prupe.2G132500_v2.0.a1

Plasminogen activator inhibitor 1 RNA-binding protein-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
19074975 .. 19079993
5019 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G132500.1

Sequence Viewer

Length: 1110 bp
ATGGCGACCATGAACCCATTTGATTTGTTGGGTGACGATGATGCCGAGGACCCGTCGCAGCTACTCGCAGCCCAGCAACAGAAACTGGCTGCGGCACCCAAGAAGGCTCTTCCGGCTCAGAACAAGTCGGGGGCTCAGGGTCAAGAGACCAAGCCGGCTAAGCTGCCTTCCAAGCCTGCACCTCCTGCTCAGGCTGTGAGGGAAGCAAGGAATGAAGCTGGTGGAGGTCGTGGAGGTGGACGTGGACGTGGATATGGATATAGCCGTGGACGCGGTGGTGGTGGGTACAATCGTGAATCACCCAATAATGAAAACACATTCACCAACAGTGGAGCACCTGCCGGCCAAGGTGCTTTTGAAGATGGTGATGGAAATCAGTCTGAAAGGCGTGGCTATGGTGGACCTCGTGGCCCTTACCGTGGTGGTCGCCGCGGTGGTTTCGGAAATGGGGAAGTCAGTGACGGGGAACGCCCTCGCAGGGTATTTGAACGTCGTAGCGGAACTGGGCGCGGAAGTGAAATCAAACGTGAGGGTTCTGGTCGTGGCAACTGGGGATCAGAAACAGATGAACTTTCACAGGTGATCGAAGAAGTTGCCAATGTAACTGAAAGGAATTTGGGTGATGAGAAGCCTGTGGGAGAGGTAGATGCAGCAGATGGAAACAAGGAGACACCTGCTAATGAACCGGAAGAAAAGGAACCTGAGGATAAGGAAATGACTCTTGAAGAGTATGAGAAGGTGCTCGAAGAGAAGAGGAAAGCCCTGCAGGCACTTAAGACTTCTGAGGAAAGAAAGGTTGACACTAAGGAATTTGCATCTTTGCAACAGCTATCAAACAAGAAGGGCAATGATGATATCTTCATTAAATTGGGCTCTGACAAGGATAAGAAGAAAGAGGCTGCTGAGAAGGAAGAAAAGTCCAAAAAGTCTGTCAGCATCAATGAGTTCTTAAAGCCTGCTGAAGGAGAAAGGTTCTACAACCCAGGTGGGCGTGGCCGAGGGCGTGGTCGTGGTCCCAGGGGAGGGTTTAGCAACAACTACTCTCACGGCAGCGCTGCAGCACCATCCATTGAAGATCCTGGGCAGTTCCCAACCTTGGGGGCCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

370

Amino Acids

39.57

Weight (kDa)

6.76

Isoelectric Point (pI)

43.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 346, 682
Acc36I ACCTGC 2 cut(s) 346, 682
AccB1I GGYRCC 1 cut(s) 94
AccII CGCG 3 cut(s) 273, 432, 510
AciI CCGC 6 cut(s) 92, 273, 430, 432, 498, 510
AclWI GGATC 2 cut(s) 562, 1070
AcoI YGGCCR 2 cut(s) 343, 994
AcsI RAATTY 2 cut(s) 613, 809
AcuI CTGAAG 1 cut(s) 981
AfaI GTAC 1 cut(s) 287
AfeI AGCGCT 1 cut(s) 1054
AfiI CCNNNNNNNGG 7 cut(s) 419, 478, 962, 1022, 1023, 1096, 1097
AflII CTTAAG 1 cut(s) 773
AgsI TTSAA 4 cut(s) 359, 488, 725, 1073
AjiI CACGTC 2 cut(s) 242, 248
AjnI CCWGG 3 cut(s) 982, 1016, 1078
AluBI AGCT 4 cut(s) 61, 163, 218, 829
AluI AGCT 4 cut(s) 61, 163, 218, 829
Alw21I GWGCWC 2 cut(s) 337, 744
Alw26I GTCTC 2 cut(s) 140, 662
AlwI GGATC 2 cut(s) 562, 1070
AlwNI CAGNNNCTG 1 cut(s) 85
Aor51HI AGCGCT 1 cut(s) 1054
AoxI GGCC 4 cut(s) 343, 409, 994, 1101
ApeKI GCWGC 9 cut(s) 58, 68, 89, 163, 650, 899, 1050, 1055, 1058
ApoI RAATTY 2 cut(s) 613, 809
ArsI GACNNNNNNTTYG 2 cut(s) 915, 947
AspLEI GCGC 2 cut(s) 510, 1055
AspS9I GGNCC 5 cut(s) 49, 401, 410, 1013, 1101
AsuHPI GGTGA 6 cut(s) 44, 291, 313, 377, 592, 632
AvaII GGWCC 3 cut(s) 49, 401, 1013
AxyI CCTNAGG 1 cut(s) 702
BaeI ACNNNNGTAYC 2 cut(s) 277, 310
BanI GGYRCC 1 cut(s) 94
BanII GRGCYC 2 cut(s) 136, 875
BauI CACGAG 1 cut(s) 405
Bbv12I GWGCWC 2 cut(s) 337, 744
BbvI GCAGC 9 cut(s) 70, 76, 80, 150, 662, 886, 1042, 1062, 1070
BccI CCATC 4 cut(s) 356, 362, 650, 1072
BceAI ACGGC 2 cut(s) 249, 1063
BcgI CGANNNNNNTGC 2 cut(s) 575, 609
BciT130I CCWGG 3 cut(s) 984, 1018, 1080
BcoDI GTCTC 2 cut(s) 140, 662
BfmI CTRYAG 2 cut(s) 764, 1056
BfoI RGCGCY 1 cut(s) 1056
BfrI CTTAAG 1 cut(s) 773
BfuAI ACCTGC 2 cut(s) 346, 682
BglI GCCNNNNNGGC 1 cut(s) 767
BlpI GCTNAGC 1 cut(s) 159
Bme1390I CCNGG 3 cut(s) 984, 1018, 1080
Bme18I GGWCC 3 cut(s) 49, 401, 1013
BmgBI CACGTC 2 cut(s) 242, 248
BmgT120I GGNCC 5 cut(s) 49, 401, 410, 1013, 1101
BmiI GGNNCC 5 cut(s) 51, 96, 699, 1015, 1102
BmrFI CCNGG 3 cut(s) 984, 1018, 1080
BmrI ACTGGG 2 cut(s) 513, 559
BmsI GCATC 4 cut(s) 31, 637, 824, 945
BmuI ACTGGG 2 cut(s) 513, 559
Bpu10I CCTNAGC 2 cut(s) 135, 189
Bpu1102I GCTNAGC 1 cut(s) 159
BsaBI GATNNNNATC 1 cut(s) 372
BsaI GGTCTC 1 cut(s) 140
BsaWI WCCGGW 1 cut(s) 685
Bsc4I CCNNNNNNNGG 7 cut(s) 419, 478, 962, 1022, 1023, 1096, 1097
Bse118I RCCGGY 2 cut(s) 154, 341
Bse1I ACTGG 3 cut(s) 90, 508, 554
Bse21I CCTNAGG 1 cut(s) 702
Bse3DI GCAATG 1 cut(s) 853
Bse8I GATNNNNATC 1 cut(s) 372
BseBI CCWGG 3 cut(s) 984, 1018, 1080
BseGI GGATG 1 cut(s) 1064
BseJI GATNNNNATC 1 cut(s) 372
BseLI CCNNNNNNNGG 7 cut(s) 419, 478, 962, 1022, 1023, 1096, 1097
BseMI GCAATG 1 cut(s) 853
BseMII CTCAG 6 cut(s) 131, 149, 203, 693, 774, 894
BseNI ACTGG 3 cut(s) 90, 508, 554
BseXI GCAGC 9 cut(s) 70, 76, 80, 150, 662, 886, 1042, 1062, 1070
BseYI CCCAGC 1 cut(s) 72
BsgI GTGCAG 1 cut(s) 162
Bsh1236I CGCG 3 cut(s) 273, 432, 510
BshFI GGCC 4 cut(s) 345, 411, 996, 1103
BshNI GGYRCC 1 cut(s) 94
BsiHKAI GWGCWC 2 cut(s) 337, 744
BsiSI CCGG 4 cut(s) 113, 155, 342, 686
BslFI GGGAC 1 cut(s) 999
BslI CCNNNNNNNGG 7 cut(s) 419, 478, 962, 1022, 1023, 1096, 1097
BsmAI GTCTC 2 cut(s) 140, 662
BsmFI GGGAC 1 cut(s) 999
BsnI GGCC 4 cut(s) 345, 411, 996, 1103
Bso31I GGTCTC 1 cut(s) 140
Bsp1286I GDGCHC 4 cut(s) 136, 337, 744, 875
Bsp143I GATC 3 cut(s) 554, 582, 1075
Bsp1720I GCTNAGC 1 cut(s) 159
BspACI CCGC 6 cut(s) 92, 273, 430, 432, 498, 510
BspANI GGCC 4 cut(s) 345, 411, 996, 1103
BspCNI CTCAG 6 cut(s) 130, 148, 202, 694, 775, 895
BspFNI CGCG 3 cut(s) 273, 432, 510
BspLI GGNNCC 5 cut(s) 51, 96, 699, 1015, 1102
BspMAI CTGCAG 2 cut(s) 768, 1060
BspMI ACCTGC 2 cut(s) 346, 682
BspPI GGATC 2 cut(s) 562, 1070
BspQI GCTCTTC 1 cut(s) 114
BspT107I GGYRCC 1 cut(s) 94
BspTI CTTAAG 1 cut(s) 773
BspTNI GGTCTC 1 cut(s) 140
BsrDI GCAATG 1 cut(s) 853
BsrFI RCCGGY 2 cut(s) 154, 341
BsrI ACTGG 3 cut(s) 90, 508, 554
BssAI RCCGGY 2 cut(s) 154, 341
BssMI GATC 3 cut(s) 554, 582, 1075
BssSI CACGAG 1 cut(s) 405
BssT1I CCWWGG 2 cut(s) 346, 1095
Bst2BI CACGAG 1 cut(s) 405
Bst2UI CCWGG 3 cut(s) 984, 1018, 1080
Bst4CI ACNGT 2 cut(s) 329, 419
Bst6I CTCTTC 4 cut(s) 114, 720, 741, 746
BstAFI CTTAAG 1 cut(s) 773
BstAPI GCANNNNNTGC 1 cut(s) 185
BstC8I GCNNGC 5 cut(s) 156, 177, 343, 768, 957
BstDEI CTNAG 8 cut(s) 117, 135, 159, 189, 702, 783, 804, 903
BstDSI CCRYGG 3 cut(s) 265, 418, 430
BstENI CCTNNNNNAGG 1 cut(s) 960
BstF5I GGATG 1 cut(s) 1064
BstFNI CGCG 3 cut(s) 273, 432, 510
BstH2I RGCGCY 1 cut(s) 1056
BstHHI GCGC 2 cut(s) 510, 1055
BstKTI GATC 3 cut(s) 557, 585, 1078
BstMAI GTCTC 2 cut(s) 140, 662
BstMBI GATC 3 cut(s) 554, 582, 1075
BstMWI GCNNNNNNNGC 6 cut(s) 113, 160, 172, 185, 270, 767
BstNI CCWGG 3 cut(s) 984, 1018, 1080
BstSCI CCNGG 3 cut(s) 982, 1016, 1078
BstSFI CTRYAG 2 cut(s) 764, 1056
BstUI CGCG 3 cut(s) 273, 432, 510
BstV1I GCAGC 9 cut(s) 70, 76, 80, 150, 662, 886, 1042, 1062, 1070
BstX2I RGATCY 1 cut(s) 1075
BstYI RGATCY 1 cut(s) 1075
Bsu36I CCTNAGG 1 cut(s) 702
BsuRI GGCC 4 cut(s) 345, 411, 996, 1103
BtgI CCRYGG 3 cut(s) 265, 418, 430
BtrI CACGTC 2 cut(s) 242, 248
BtsCI GGATG 1 cut(s) 1064
BtsIMutI CAGTG 2 cut(s) 334, 463
BveI ACCTGC 2 cut(s) 346, 682
Cac8I GCNNGC 5 cut(s) 156, 177, 343, 768, 957
CaiI CAGNNNCTG 1 cut(s) 85
CfoI GCGC 2 cut(s) 510, 1055
Cfr10I RCCGGY 2 cut(s) 154, 341
Cfr13I GGNCC 5 cut(s) 49, 401, 410, 1013, 1101
Cfr42I CCGCGG 1 cut(s) 433
CseI GACGC 1 cut(s) 279
Csp6I GTAC 1 cut(s) 286
CspCI CAANNNNNGTGG 2 cut(s) 967, 1002
CviAII CATG 1 cut(s) 10
CviQI GTAC 1 cut(s) 286
DdeI CTNAG 8 cut(s) 117, 135, 159, 189, 702, 783, 804, 903
DpnI GATC 3 cut(s) 556, 584, 1077
DpnII GATC 3 cut(s) 554, 582, 1075
EaeI YGGCCR 2 cut(s) 343, 994
Eam1104I CTCTTC 4 cut(s) 114, 720, 741, 746
EarI CTCTTC 4 cut(s) 114, 720, 741, 746
Eco130I CCWWGG 2 cut(s) 346, 1095
Eco24I GRGCYC 2 cut(s) 136, 875
Eco31I GGTCTC 1 cut(s) 140
Eco32I GATATC 1 cut(s) 856
Eco47I GGWCC 3 cut(s) 49, 401, 1013
Eco47III AGCGCT 1 cut(s) 1054
Eco57I CTGAAG 1 cut(s) 981
Eco81I CCTNAGG 1 cut(s) 702
EcoNI CCTNNNNNAGG 1 cut(s) 960
EcoO109I RGGNCCY 1 cut(s) 49
EcoRII CCWGG 3 cut(s) 982, 1016, 1078
EcoRV GATATC 1 cut(s) 856
EcoT14I CCWWGG 2 cut(s) 346, 1095
EcoT38I GRGCYC 2 cut(s) 136, 875
ErhI CCWWGG 2 cut(s) 346, 1095
FaeI CATG 1 cut(s) 13
FaiI YATR 5 cut(s) 11, 255, 261, 396, 732
FaqI GGGAC 1 cut(s) 999
FatI CATG 1 cut(s) 9
FokI GGATG 1 cut(s) 1051
FriOI GRGCYC 2 cut(s) 136, 875
GlaI GCGC 2 cut(s) 509, 1054
GsaI CCCAGC 1 cut(s) 76
HaeII RGCGCY 1 cut(s) 1056
HaeIII GGCC 4 cut(s) 345, 411, 996, 1103
HapII CCGG 4 cut(s) 113, 155, 342, 686
HgaI GACGC 1 cut(s) 279
HhaI GCGC 2 cut(s) 510, 1055
Hin1II CATG 1 cut(s) 13
Hin6I GCGC 2 cut(s) 508, 1053
HinP1I GCGC 2 cut(s) 508, 1053
HincII GTYRAC 1 cut(s) 799
HindII GTYRAC 1 cut(s) 799
HinfI GANTC 2 cut(s) 296, 718
HpaII CCGG 4 cut(s) 113, 155, 342, 686
HphI GGTGA 6 cut(s) 44, 291, 313, 377, 592, 632
Hpy166II GTNNAC 5 cut(s) 239, 245, 269, 401, 799
Hpy188I TCNGA 6 cut(s) 120, 382, 443, 559, 784, 877
Hpy188III TCNNGA 3 cut(s) 143, 293, 722
Hpy8I GTNNAC 5 cut(s) 239, 245, 269, 401, 799
Hpy99I CGWCG 2 cut(s) 58, 495
HpyAV CCTTC 6 cut(s) 97, 177, 730, 835, 901, 956
HpyCH4III ACNGT 2 cut(s) 329, 419
HpyCH4IV ACGT 4 cut(s) 241, 247, 490, 526
HpyCH4V TGCA 6 cut(s) 179, 650, 766, 815, 823, 1058
HpyF10VI GCNNNNNNNGC 6 cut(s) 113, 160, 172, 185, 270, 767
HpyF3I CTNAG 8 cut(s) 117, 135, 159, 189, 702, 783, 804, 903
HpySE526I ACGT 4 cut(s) 241, 247, 490, 526
Hsp92II CATG 1 cut(s) 13
HspAI GCGC 2 cut(s) 508, 1053
KroI GCCGGC 2 cut(s) 154, 341
KroNI GCCGGC 2 cut(s) 156, 343
KspI CCGCGG 1 cut(s) 433
Kzo9I GATC 3 cut(s) 554, 582, 1075
LguI GCTCTTC 1 cut(s) 114
LmnI GCTCC 1 cut(s) 332
Lsp1109I GCAGC 9 cut(s) 70, 76, 80, 150, 662, 886, 1042, 1062, 1070
LweI GCATC 4 cut(s) 31, 637, 824, 945
MaeII ACGT 4 cut(s) 241, 247, 490, 526
MaeIII GTNAC 3 cut(s) 32, 458, 601
MalI GATC 3 cut(s) 556, 584, 1077
MboI GATC 3 cut(s) 554, 582, 1075
MflI RGATCY 1 cut(s) 1075
MhlI GDGCHC 4 cut(s) 136, 337, 744, 875
MluCI AATT 3 cut(s) 613, 809, 866
MlyI GAGTC 1 cut(s) 712
MroNI GCCGGC 2 cut(s) 154, 341
MseI TTAA 3 cut(s) 774, 864, 950
MspA1I CMGCKG 1 cut(s) 432
MspCI CTTAAG 1 cut(s) 773
MspI CCGG 4 cut(s) 113, 155, 342, 686
MspR9I CCNGG 3 cut(s) 984, 1018, 1080
MvaI CCWGG 3 cut(s) 984, 1018, 1080
MvnI CGCG 3 cut(s) 273, 432, 510
MwoI GCNNNNNNNGC 6 cut(s) 113, 160, 172, 185, 270, 767
NaeI GCCGGC 2 cut(s) 156, 343
NdeII GATC 3 cut(s) 554, 582, 1075
NgoMIV GCCGGC 2 cut(s) 154, 341
NlaIII CATG 1 cut(s) 13
NlaIV GGNNCC 5 cut(s) 51, 96, 699, 1015, 1102
NmeAIII GCCGAG 2 cut(s) 70, 1022
NmuCI GTSAC 2 cut(s) 32, 458
PaqCI CACCTGC 2 cut(s) 346, 682
PasI CCCWGGG 1 cut(s) 1017
PciSI GCTCTTC 1 cut(s) 114
PcsI WCGNNNNNNNCGW 1 cut(s) 42
PdiI GCCGGC 2 cut(s) 156, 343
PfeI GAWTC 1 cut(s) 296
PleI GAGTC 1 cut(s) 712
PpsI GAGTC 1 cut(s) 712
PpuMI RGGWCCY 1 cut(s) 49
Psp5II RGGWCCY 1 cut(s) 49
Psp6I CCWGG 3 cut(s) 982, 1016, 1078
PspFI CCCAGC 1 cut(s) 72
PspGI CCWGG 3 cut(s) 982, 1016, 1078
PspN4I GGNNCC 5 cut(s) 51, 96, 699, 1015, 1102
PspPI GGNCC 5 cut(s) 49, 401, 410, 1013, 1101
PspPPI RGGWCCY 1 cut(s) 49
PstI CTGCAG 2 cut(s) 768, 1060
PstNI CAGNNNCTG 1 cut(s) 85
PsuI RGATCY 1 cut(s) 1075
RsaI GTAC 1 cut(s) 287
RsaNI GTAC 1 cut(s) 286
SacII CCGCGG 1 cut(s) 433
SapI GCTCTTC 1 cut(s) 114
SaqAI TTAA 3 cut(s) 774, 864, 950
Sau3AI GATC 3 cut(s) 554, 582, 1075
Sau96I GGNCC 5 cut(s) 49, 401, 410, 1013, 1101
SbfI CCTGCAGG 1 cut(s) 768
SchI GAGTC 1 cut(s) 712
ScrFI CCNGG 3 cut(s) 984, 1018, 1080
SdaI CCTGCAGG 1 cut(s) 768
SduI GDGCHC 4 cut(s) 136, 337, 744, 875
SfaNI GCATC 4 cut(s) 31, 637, 824, 945
SfcI CTRYAG 2 cut(s) 764, 1056
Sfr303I CCGCGG 1 cut(s) 433
SgrBI CCGCGG 1 cut(s) 433
SinI GGWCC 3 cut(s) 49, 401, 1013
SmlI CTYRAG 1 cut(s) 773
SmoI CTYRAG 1 cut(s) 773
Sse8387I CCTGCAGG 1 cut(s) 768
Sse9I AATT 3 cut(s) 613, 809, 866
SsiI CCGC 6 cut(s) 92, 273, 430, 432, 498, 510
StyD4I CCNGG 3 cut(s) 982, 1016, 1078
StyI CCWWGG 2 cut(s) 346, 1095
TaaI ACNGT 2 cut(s) 329, 419
TaiI ACGT 4 cut(s) 244, 250, 493, 529
TaqI TCGA 2 cut(s) 585, 744
TasI AATT 3 cut(s) 613, 809, 866
TauI GCSGC 2 cut(s) 95, 432
TfiI GAWTC 1 cut(s) 296
Tru1I TTAA 3 cut(s) 774, 864, 950
Tru9I TTAA 3 cut(s) 774, 864, 950
TscAI CASTG 2 cut(s) 334, 463
TseFI GTSAC 2 cut(s) 32, 458
TseI GCWGC 9 cut(s) 58, 68, 89, 163, 650, 899, 1050, 1055, 1058
Tsp45I GTSAC 2 cut(s) 32, 458
TspDTI ATGAA 6 cut(s) 26, 228, 324, 582, 696, 850
TspRI CASTG 2 cut(s) 334, 463
Vha464I CTTAAG 1 cut(s) 773
VpaK11BI GGWCC 3 cut(s) 49, 401, 1013
XagI CCTNNNNNAGG 1 cut(s) 960
XapI RAATTY 2 cut(s) 613, 809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.