Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0001980

Physical Location & Seq

Genomic Coordinates Reverse (-)

19378835 .. 19382301

Gene Structure 3467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G136200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGTCATATTCACCAGACAGAAAATCTGGTAGCCCAACAAAGTCACAAGTTCTGAAGAGGCCGAGGCCATTGAGTCTCCCAGACCAAGCTCTCAAGTATGTTATCATGAAGATGCAGCTTCAGAGCCACCACCACTACAGCTCTCTCTCTCCTTCAACTGCTTCACCTTCTCCTCACTCTGAGCCTGACCTCTCTTCTGGGTTCAATTCTCTTACCCTAGACCCTCCCGGACCAGATTCCACCTCCCTCTTATCCGATGAGCTTCTCCTCTCCATCTTCGCCAAGCTCCCAATTTCCCAGTACCTCCCCAACTCCCTTGTCTGCAAGCGCTGGCTGTACCTCCATGGCCGCTTGGTGCAATCTGTAAAGGTCTTTGATTGGGGGTTTTTGGACTCGGGTCGGGTCTTCGCCCGGTTCCCGAACCTCACTGAGTTTGATATCGTCCATGCTTGCATTCGGTCTCCGCGGAATTCGGGGATTCTTGTGACGAGGAAGGCTTTGACTGTTCATATCGACTCGCTTTTCAGCCCAAATGGGTTTATTGAGGAAAGTGATGTGTTGAAGAACAGTGTGGTGGATGATGGGCTCAGGTTGATTGCCAGTTCGTACCCGAATTTGCGCCGAATTGCGGTTATAGGTGCGAGTGAAAATGGGTTGTTGAGGATTGCTGAGGATTGTCAAACACTGCAGGAATTGGAGCTGCATTGTTGTGGAGACTTGGCATTGAAGGGAATTCGTGCGTGTAGGAACTTGCAGATTGTGAAATTGATTGCTTGCGTTGATGGGTTTTACAAGGCAGTGATTTCGGATATTGGGTTGACAATTTTAGCTCAGGGGTGTAGGAGGTTAGTGAAGCTTGAGCTTTGTGGGTGTGAAGGGAGCTATGATGGGATTAAGGCAATTGGGCAGTGTTGCCAAATGCTTGAGGAGTTGACTCTCAATGATCATAGGATGGATGGTGGGTGGTTGGCTTCTCTGCCCTTTTGTGGGAATTTGAAGACTTTGACGCTTCAGTCTTGCAAGGACATTGATTCGAGCCCCGGCCCTGATGAGCACTTGGGATTTTGTCCCACCATTGAGGAGTTGCATTTACGGCGGTGTCAAGTGAGGGATAAGCATGGTGTGAGAGCATTGTTCTTGGTGTGTGAGGCTGTTAGGGATATTGTTCTGCAGGATTGTTGGGGGTTGGAGGATGAAGTATTTGCATTTGCGAGTATTTGTAGGAGGGTGAAGCTGATTTCTCTGCAAGGATGCTCATTGCTGACGACAGGAGGTCTGGAGTCGGTGCTCCTTTGTTGGAAAGAGCTTCAAAGGCTTAGAGTAGTATCATGTAACAATATAACAGACAGTGAAACAACTCCTGCCTTGGCAACCTTATTTTCCGTTCTGAAAGAGTTGACATGGCGACCAAATACCCGATCTCTCTTGTCATCAAGTCTTGCTGGGACTGGAGTGGGACTGAAAGGTGGCAGGTTTTTCAAGAGCTTAAAGCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like Remorin_C

Protein Analysis

499

Amino Acids

54.95

Weight (kDa)

8.15

Isoelectric Point (pI)

56.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001980)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51370 AT5G51370 AT5G51380
fragaria_vesca	FvH4_7g10820 FvH4_7g27300 FvH4_7g27300 FvH4_7g27300
malus_domestica	MD01G1182100.v1.1 MD02G1213700.v1.1 MD07G1113100.v1.1 MD07G1252400.v1.1 MD11G1194200.v1.1
prunus_persica	Prupe.2G136200_v2.0.a1 Prupe.2G136200_v2.0.a1 Prupe.2G275900_v2.0.a1
pyrus_communis	pycom01g19190 pycom07g09790 pycom07g22480 pycom11g20120
rosa_chinensis	RchiOBHm_Chr1g0348741 RchiOBHm_Chr1g0374141 RchiOBHm_Chr6g0287661
rosa_laevigata	RLG00000012476 RLG00000026759 RLG00000028626
rosa_multiflora	Rmu_co7963096.1_g000001 Rmu_sc0001813.1_g000001 Rmu_sc0006564.1_g000008 Rmu_sc0031820.1_g000001 Rmu_ssc0000007.1_g000044 Rmu_ssc0000450.1_g000002
rosa_roxburghii	Rroxscaffold_4G00283690 Rroxscaffold_4G00306650
rosa_rugosa	Rorug01G0197700 Rorug01G0381000
rosa_samantha	Rh1AG214600 Rh1AG392000 Rh1BG181200 Rh1BG356000 Rh1CG199300 Rh1CG368900 Rh1DG211300 Rh6CG302900
rosa_wichuraiana	Rw1G018210 Rw1G034370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1012
Acc36I	ACCTGC	1 cut(s)	1461
AccII	CGCG	1 cut(s)	466
AciI	CCGC	5 cut(s)	349, 464, 466, 629, 1096
AcoI	YGGCCR	1 cut(s)	346
AcsI	RAATTY	4 cut(s)	469, 613, 732, 991
AcuI	CTGAAG	3 cut(s)	74, 104, 995
AfaI	GTAC	3 cut(s)	302, 338, 608
AfeI	AGCGCT	1 cut(s)	329
AfiI	CCNNNNNNNGG	3 cut(s)	628, 986, 987
AgsI	TTSAA	7 cut(s)	156, 205, 562, 727, 997, 1310, 1480
AhdI	GACNNNNNGTC	1 cut(s)	1272
Alw21I	GWGCWC	2 cut(s)	1056, 1290
Alw26I	GTCTC	3 cut(s)	80, 465, 708
Ama87I	CYCGRG	1 cut(s)	394
Aor51HI	AGCGCT	1 cut(s)	329
AoxI	GGCC	4 cut(s)	59, 65, 346, 1042
ApeKI	GCWGC	2 cut(s)	115, 700
ApoI	RAATTY	4 cut(s)	469, 613, 732, 991
AspLEI	GCGC	2 cut(s)	330, 621
AspS9I	GGNCC	2 cut(s)	230, 1043
AsuC2I	CCSGG	3 cut(s)	228, 412, 1041
AsuHPI	GGTGA	3 cut(s)	3, 156, 1240
AvaI	CYCGRG	1 cut(s)	394
AvaII	GGWCC	1 cut(s)	230
BanII	GRGCYC	2 cut(s)	588, 1040
BbsI	GAAGAC	2 cut(s)	397, 1004
Bbv12I	GWGCWC	2 cut(s)	1056, 1290
BbvCI	CCTCAGC	1 cut(s)	669
BbvI	GCAGC	2 cut(s)	127, 687
BccI	CCATC	6 cut(s)	281, 575, 776, 881, 946, 950
BceAI	ACGGC	1 cut(s)	1109
BcgI	CGANNNNNNTGC	2 cut(s)	786, 820
BclI	TGATCA	1 cut(s)	943
BcnI	CCSGG	3 cut(s)	228, 412, 1041
BcoDI	GTCTC	3 cut(s)	80, 465, 708
BfaI	CTAG	1 cut(s)	218
BfmI	CTRYAG	3 cut(s)	136, 686, 1169
BfoI	RGCGCY	1 cut(s)	331
BfuAI	ACCTGC	1 cut(s)	1461
BisI	GCNGC	3 cut(s)	116, 349, 701
BlsI	GCNGC	3 cut(s)	117, 350, 702
Bme1390I	CCNGG	3 cut(s)	228, 412, 1041
Bme18I	GGWCC	1 cut(s)	230
BmeRI	GACNNNNNGTC	1 cut(s)	1272
BmeT110I	CYCGRG	1 cut(s)	394
BmgT120I	GGNCC	2 cut(s)	230, 1043
BmiI	GGNNCC	1 cut(s)	416
BmrFI	CCNGG	3 cut(s)	228, 412, 1041
BmrI	ACTGGG	1 cut(s)	292
BmsI	GCATC	2 cut(s)	102, 1241
BmuI	ACTGGG	1 cut(s)	292
BoxI	GACNNNNGTC	1 cut(s)	396
BpiI	GAAGAC	2 cut(s)	397, 1004
BpmI	CTGGAG	2 cut(s)	1298, 1470
Bpu10I	CCTNAGC	3 cut(s)	587, 669, 831
BpuEI	CTTGAG	3 cut(s)	77, 878, 944
BpuMI	CCSGG	3 cut(s)	228, 412, 1041
BsaI	GGTCTC	1 cut(s)	465
BsaJI	CCNNGG	5 cut(s)	62, 343, 464, 1039, 1365
Bsc4I	CCNNNNNNNGG	3 cut(s)	628, 986, 987
Bse1I	ACTGG	3 cut(s)	298, 600, 1453
Bse3DI	GCAATG	1 cut(s)	1256
BseDI	CCNNGG	5 cut(s)	62, 343, 464, 1039, 1365
BseGI	GGATG	5 cut(s)	583, 957, 961, 1198, 1256
BseLI	CCNNNNNNNGG	3 cut(s)	628, 986, 987
BseMI	GCAATG	1 cut(s)	1256
BseMII	CTCAG	5 cut(s)	171, 420, 601, 660, 845
BseNI	ACTGG	3 cut(s)	298, 600, 1453
BseRI	GAGGAG	4 cut(s)	162, 257, 941, 1094
BseXI	GCAGC	2 cut(s)	127, 687
BseYI	CCCAGC	1 cut(s)	1442
Bsh1236I	CGCG	1 cut(s)	466
BshFI	GGCC	4 cut(s)	61, 67, 348, 1044
BsiHKAI	GWGCWC	2 cut(s)	1056, 1290
BsiHKCI	CYCGRG	1 cut(s)	394
BsiSI	CCGG	3 cut(s)	228, 412, 1041
BslFI	GGGAC	3 cut(s)	1053, 1459, 1470
BslI	CCNNNNNNNGG	3 cut(s)	628, 986, 987
BsmAI	GTCTC	3 cut(s)	80, 465, 708
BsmFI	GGGAC	3 cut(s)	1053, 1459, 1470
BsmI	GAATGC	1 cut(s)	453
BsnI	GGCC	4 cut(s)	61, 67, 348, 1044
Bso31I	GGTCTC	1 cut(s)	465
BsoBI	CYCGRG	1 cut(s)	394
Bsp1286I	GDGCHC	4 cut(s)	588, 1040, 1056, 1290
Bsp143I	GATC	2 cut(s)	943, 1418
Bsp19I	CCATGG	1 cut(s)	343
BspACI	CCGC	5 cut(s)	349, 464, 466, 629, 1096
BspANI	GGCC	4 cut(s)	61, 67, 348, 1044
BspCNI	CTCAG	5 cut(s)	172, 421, 600, 661, 844
BspFNI	CGCG	1 cut(s)	466
BspHI	TCATGA	1 cut(s)	105
BspLI	GGNNCC	1 cut(s)	416
BspMAI	CTGCAG	2 cut(s)	690, 1173
BspMI	ACCTGC	1 cut(s)	1461
BspTNI	GGTCTC	1 cut(s)	465
BsrDI	GCAATG	1 cut(s)	1256
BsrI	ACTGG	3 cut(s)	298, 600, 1453
BssECI	CCNNGG	5 cut(s)	62, 343, 464, 1039, 1365
BssMI	GATC	2 cut(s)	943, 1418
BssT1I	CCWWGG	2 cut(s)	343, 1365
Bst4CI	ACNGT	3 cut(s)	505, 569, 1349
Bst6I	CTCTTC	2 cut(s)	50, 199
BstC8I	GCNNGC	4 cut(s)	326, 332, 451, 775
BstDEI	CTNAG	6 cut(s)	180, 429, 587, 669, 831, 1316
BstDSI	CCRYGG	2 cut(s)	343, 464
BstF5I	GGATG	5 cut(s)	583, 957, 961, 1198, 1256
BstFNI	CGCG	1 cut(s)	466
BstH2I	RGCGCY	1 cut(s)	331
BstHHI	GCGC	2 cut(s)	330, 621
BstKTI	GATC	2 cut(s)	946, 1421
BstMAI	GTCTC	3 cut(s)	80, 465, 708
BstMBI	GATC	2 cut(s)	943, 1418
BstMWI	GCNNNNNNNGC	2 cut(s)	1093, 1312
BstPAI	GACNNNNGTC	1 cut(s)	396
BstSCI	CCNGG	3 cut(s)	226, 410, 1039
BstSFI	CTRYAG	3 cut(s)	136, 686, 1169
BstUI	CGCG	1 cut(s)	466
BstV1I	GCAGC	2 cut(s)	127, 687
BstV2I	GAAGAC	2 cut(s)	397, 1004
BsuRI	GGCC	4 cut(s)	61, 67, 348, 1044
BtgI	CCRYGG	2 cut(s)	343, 464
BtsCI	GGATG	5 cut(s)	583, 957, 961, 1198, 1256
BtsI	GCAGTG	3 cut(s)	683, 804, 914
BtsIMutI	CAGTG	6 cut(s)	426, 574, 683, 804, 914, 1354
BveI	ACCTGC	1 cut(s)	1461
Cac8I	GCNNGC	4 cut(s)	326, 332, 451, 775
CciI	TCATGA	1 cut(s)	105
CfoI	GCGC	2 cut(s)	330, 621
Cfr13I	GGNCC	2 cut(s)	230, 1043
Cfr42I	CCGCGG	1 cut(s)	467
CseI	GACGC	1 cut(s)	1015
Csp6I	GTAC	3 cut(s)	301, 337, 607
CviAII	CATG	6 cut(s)	106, 344, 446, 1118, 1329, 1401
CviQI	GTAC	3 cut(s)	301, 337, 607
DdeI	CTNAG	6 cut(s)	180, 429, 587, 669, 831, 1316
DpnI	GATC	2 cut(s)	945, 1420
DpnII	GATC	2 cut(s)	943, 1418
DrdI	GACNNNNNNGTC	1 cut(s)	1012
DriI	GACNNNNNGTC	1 cut(s)	1272
DseDI	GACNNNNNNGTC	1 cut(s)	1012
EaeI	YGGCCR	1 cut(s)	346
Eam1104I	CTCTTC	2 cut(s)	50, 199
Eam1105I	GACNNNNNGTC	1 cut(s)	1272
EarI	CTCTTC	2 cut(s)	50, 199
Eco130I	CCWWGG	2 cut(s)	343, 1365
Eco24I	GRGCYC	2 cut(s)	588, 1040
Eco31I	GGTCTC	1 cut(s)	465
Eco32I	GATATC	1 cut(s)	439
Eco47I	GGWCC	1 cut(s)	230
Eco47III	AGCGCT	1 cut(s)	329
Eco57I	CTGAAG	3 cut(s)	74, 104, 995
Eco88I	CYCGRG	1 cut(s)	394
EcoRI	GAATTC	2 cut(s)	469, 732
EcoRV	GATATC	1 cut(s)	439
EcoT14I	CCWWGG	2 cut(s)	343, 1365
EcoT38I	GRGCYC	2 cut(s)	588, 1040
ErhI	CCWWGG	2 cut(s)	343, 1365
FaeI	CATG	6 cut(s)	109, 347, 449, 1121, 1332, 1404
FaqI	GGGAC	3 cut(s)	1053, 1459, 1470
FatI	CATG	6 cut(s)	105, 343, 445, 1117, 1328, 1400
FbaI	TGATCA	1 cut(s)	943
Fnu4HI	GCNGC	3 cut(s)	116, 349, 701
FokI	GGATG	5 cut(s)	590, 964, 968, 1205, 1263
FriOI	GRGCYC	2 cut(s)	588, 1040
Fsp4HI	GCNGC	3 cut(s)	116, 349, 701
FspBI	CTAG	1 cut(s)	218
GlaI	GCGC	2 cut(s)	329, 620
GluI	GCNGC	3 cut(s)	116, 349, 701
GsaI	CCCAGC	1 cut(s)	1446
GsuI	CTGGAG	2 cut(s)	1298, 1470
HaeII	RGCGCY	1 cut(s)	331
HaeIII	GGCC	4 cut(s)	61, 67, 348, 1044
HapII	CCGG	3 cut(s)	228, 412, 1041
HgaI	GACGC	1 cut(s)	1015
HhaI	GCGC	2 cut(s)	330, 621
Hin1II	CATG	6 cut(s)	109, 347, 449, 1121, 1332, 1404
Hin6I	GCGC	2 cut(s)	328, 619
HinP1I	GCGC	2 cut(s)	328, 619
HincII	GTYRAC	3 cut(s)	819, 933, 1398
HindII	GTYRAC	3 cut(s)	819, 933, 1398
HindIII	AAGCTT	1 cut(s)	854
HinfI	GANTC	8 cut(s)	73, 236, 392, 478, 515, 934, 1031, 1280
HpaII	CCGG	3 cut(s)	228, 412, 1041
HphI	GGTGA	3 cut(s)	3, 156, 1240
Hpy166II	GTNNAC	3 cut(s)	819, 933, 1398
Hpy188I	TCNGA	6 cut(s)	54, 123, 181, 256, 808, 1389
Hpy188III	TCNNGA	4 cut(s)	106, 418, 1277, 1480
Hpy8I	GTNNAC	3 cut(s)	819, 933, 1398
HpyAV	CCTTC	5 cut(s)	162, 177, 487, 721, 869
HpyCH4III	ACNGT	3 cut(s)	505, 569, 1349
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1093, 1312
HpyF3I	CTNAG	6 cut(s)	180, 429, 587, 669, 831, 1316
Hsp92II	CATG	6 cut(s)	109, 347, 449, 1121, 1332, 1404
HspAI	GCGC	2 cut(s)	328, 619
Ksp22I	TGATCA	1 cut(s)	943
KspI	CCGCGG	1 cut(s)	467
Kzo9I	GATC	2 cut(s)	943, 1418
LmnI	GCTCC	4 cut(s)	291, 697, 879, 1293
Lsp1109I	GCAGC	2 cut(s)	127, 687
LweI	GCATC	2 cut(s)	102, 1241
MaeI	CTAG	1 cut(s)	218
MaeIII	GTNAC	3 cut(s)	42, 484, 1331
MalI	GATC	2 cut(s)	945, 1420
MboI	GATC	2 cut(s)	943, 1418
MboII	GAAGA	7 cut(s)	67, 121, 186, 268, 397, 574, 1009
MfeI	CAATTG	1 cut(s)	900
MhlI	GDGCHC	4 cut(s)	588, 1040, 1056, 1290
MlyI	GAGTC	5 cut(s)	82, 386, 509, 928, 1289
MmeI	TCCRAC	2 cut(s)	1167, 1277
MseI	TTAA	3 cut(s)	894, 1487, 1495
MslI	CAYNNNNRTG	2 cut(s)	110, 708
MspA1I	CMGCKG	1 cut(s)	466
MspI	CCGG	3 cut(s)	228, 412, 1041
MspR9I	CCNGG	3 cut(s)	228, 412, 1041
MunI	CAATTG	1 cut(s)	900
Mva1269I	GAATGC	1 cut(s)	453
MvnI	CGCG	1 cut(s)	466
MwoI	GCNNNNNNNGC	2 cut(s)	1093, 1312
NciI	CCSGG	3 cut(s)	228, 412, 1041
NcoI	CCATGG	1 cut(s)	343
NdeII	GATC	2 cut(s)	943, 1418
NlaIII	CATG	6 cut(s)	109, 347, 449, 1121, 1332, 1404
NlaIV	GGNNCC	1 cut(s)	416
NmeAIII	GCCGAG	1 cut(s)	87
NmuCI	GTSAC	2 cut(s)	42, 484
PagI	TCATGA	1 cut(s)	105
PctI	GAATGC	1 cut(s)	453
PfeI	GAWTC	3 cut(s)	236, 478, 1031
PfoI	TCCNGGA	1 cut(s)	226
PkrI	GCNGC	3 cut(s)	117, 350, 702
PleI	GAGTC	5 cut(s)	81, 386, 509, 928, 1288
PpsI	GAGTC	5 cut(s)	81, 386, 509, 928, 1288
PshAI	GACNNNNGTC	1 cut(s)	396
PspFI	CCCAGC	1 cut(s)	1442
PspN4I	GGNNCC	1 cut(s)	416
PspPI	GGNCC	2 cut(s)	230, 1043
PstI	CTGCAG	2 cut(s)	690, 1173
RsaI	GTAC	3 cut(s)	302, 338, 608
RsaNI	GTAC	3 cut(s)	301, 337, 607
RseI	CAYNNNNRTG	2 cut(s)	110, 708
SacII	CCGCGG	1 cut(s)	467
SaqAI	TTAA	3 cut(s)	894, 1487, 1495
SatI	GCNGC	3 cut(s)	116, 349, 701
Sau3AI	GATC	2 cut(s)	943, 1418
Sau96I	GGNCC	2 cut(s)	230, 1043
SchI	GAGTC	5 cut(s)	82, 386, 509, 928, 1289
ScrFI	CCNGG	3 cut(s)	228, 412, 1041
SduI	GDGCHC	4 cut(s)	588, 1040, 1056, 1290
SfaNI	GCATC	2 cut(s)	102, 1241
SfcI	CTRYAG	3 cut(s)	136, 686, 1169
Sfr303I	CCGCGG	1 cut(s)	467
SgrBI	CCGCGG	1 cut(s)	467
SinI	GGWCC	1 cut(s)	230
SmiMI	CAYNNNNRTG	2 cut(s)	110, 708
SmlI	CTYRAG	3 cut(s)	92, 857, 923
SmoI	CTYRAG	3 cut(s)	92, 857, 923
SsiI	CCGC	5 cut(s)	349, 464, 466, 629, 1096
SspMI	CTAG	1 cut(s)	218
StyD4I	CCNGG	3 cut(s)	226, 410, 1039
StyI	CCWWGG	2 cut(s)	343, 1365
TaaI	ACNGT	3 cut(s)	505, 569, 1349
TaqI	TCGA	2 cut(s)	513, 1034
TaqII	GACCGA	1 cut(s)	447
TauI	GCSGC	1 cut(s)	351
TfiI	GAWTC	3 cut(s)	236, 478, 1031
Tru1I	TTAA	3 cut(s)	894, 1487, 1495
Tru9I	TTAA	3 cut(s)	894, 1487, 1495
TscAI	CASTG	6 cut(s)	433, 574, 690, 804, 914, 1354
TseFI	GTSAC	2 cut(s)	42, 484
TseI	GCWGC	2 cut(s)	115, 700
Tsp45I	GTSAC	2 cut(s)	42, 484
TspDTI	ATGAA	3 cut(s)	122, 497, 1209
TspGWI	ACGGA	1 cut(s)	1372
TspRI	CASTG	6 cut(s)	433, 574, 690, 804, 914, 1354
VpaK11BI	GGWCC	1 cut(s)	230
XapI	RAATTY	4 cut(s)	469, 613, 732, 991
XspI	CTAG	1 cut(s)	218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.