f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51370 AT5G51370 AT5G51380 |
| fragaria_vesca | FvH4_7g10820 FvH4_7g27300 FvH4_7g27300 FvH4_7g27300 |
| malus_domestica | MD01G1182100.v1.1 MD02G1213700.v1.1 MD07G1113100.v1.1 MD07G1252400.v1.1 MD11G1194200.v1.1 |
| prunus_persica | Prupe.2G136200_v2.0.a1 Prupe.2G136200_v2.0.a1 Prupe.2G275900_v2.0.a1 |
| pyrus_communis | pycom01g19190 pycom07g09790 pycom07g22480 pycom11g20120 |
| rosa_chinensis | RchiOBHm_Chr1g0348741 RchiOBHm_Chr1g0374141 RchiOBHm_Chr6g0287661 |
| rosa_laevigata | RLG00000012476 RLG00000026759 RLG00000028626 |
| rosa_multiflora | Rmu_co7963096.1_g000001 Rmu_sc0001813.1_g000001 Rmu_sc0006564.1_g000008 Rmu_sc0031820.1_g000001 Rmu_ssc0000007.1_g000044 Rmu_ssc0000450.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00283690 Rroxscaffold_4G00306650 |
| rosa_rugosa | Rorug01G0197700 Rorug01G0381000 |
| rosa_samantha | Rh1AG214600 Rh1AG392000 Rh1BG181200 Rh1BG356000 Rh1CG199300 Rh1CG368900 Rh1DG211300 Rh6CG302900 |
| rosa_wichuraiana | Rw1G018210 Rw1G034370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 514 |
| AccB1I | GGYRCC | 3 cut(s) | 514, 577, 675 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 991 |
| AccII | CGCG | 1 cut(s) | 386 |
| AciI | CCGC | 5 cut(s) | 113, 116, 400, 421, 1040 |
| AclWI | GGATC | 1 cut(s) | 968 |
| AcoI | YGGCCR | 3 cut(s) | 146, 351, 840 |
| AcsI | RAATTY | 5 cut(s) | 300, 345, 541, 817, 1060 |
| AfaI | GTAC | 2 cut(s) | 516, 910 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 189, 991 |
| AjnI | CCWGG | 4 cut(s) | 414, 501, 631, 1364 |
| Alw26I | GTCTC | 3 cut(s) | 115, 1468, 1554 |
| AlwI | GGATC | 1 cut(s) | 968 |
| Ama87I | CYCGRG | 2 cut(s) | 130, 1109 |
| AoxI | GGCC | 7 cut(s) | 146, 270, 315, 351, 418, 840, 1112 |
| ApeKI | GCWGC | 3 cut(s) | 806, 1217, 1220 |
| ApoI | RAATTY | 5 cut(s) | 300, 345, 541, 817, 1060 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 440, 472 |
| Asp718I | GGTACC | 1 cut(s) | 514 |
| AspLEI | GCGC | 3 cut(s) | 386, 388, 1045 |
| AspS9I | GGNCC | 6 cut(s) | 180, 271, 316, 418, 535, 1112 |
| AsuC2I | CCSGG | 5 cut(s) | 519, 547, 602, 1110, 1111 |
| AsuHPI | GGTGA | 5 cut(s) | 448, 590, 647, 931, 1309 |
| AsuII | TTCGAA | 1 cut(s) | 609 |
| AvaI | CYCGRG | 2 cut(s) | 130, 1109 |
| AvaII | GGWCC | 2 cut(s) | 180, 535 |
| BaeGI | GKGCMC | 2 cut(s) | 680, 749 |
| BalI | TGGCCA | 2 cut(s) | 353, 842 |
| BanI | GGYRCC | 3 cut(s) | 514, 577, 675 |
| BanII | GRGCYC | 1 cut(s) | 245 |
| BbsI | GAAGAC | 2 cut(s) | 453, 1073 |
| BbvCI | CCTCAGC | 1 cut(s) | 1175 |
| BbvI | GCAGC | 3 cut(s) | 818, 1207, 1229 |
| BccI | CCATC | 4 cut(s) | 950, 1015, 1019, 1507 |
| BceAI | ACGGC | 4 cut(s) | 120, 133, 161, 330 |
| BciT130I | CCWGG | 4 cut(s) | 416, 503, 633, 1366 |
| BclI | TGATCA | 2 cut(s) | 222, 1012 |
| BcnI | CCSGG | 5 cut(s) | 519, 547, 602, 1110, 1111 |
| BcoDI | GTCTC | 3 cut(s) | 115, 1468, 1554 |
| BfaI | CTAG | 4 cut(s) | 695, 711, 1224, 1313 |
| BfoI | RGCGCY | 1 cut(s) | 1046 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 417 |
| BisI | GCNGC | 6 cut(s) | 114, 421, 807, 1041, 1218, 1221 |
| BlpI | GCTNAGC | 1 cut(s) | 407 |
| BlsI | GCNGC | 6 cut(s) | 115, 422, 808, 1042, 1219, 1222 |
| Bme1390I | CCNGG | 9 cut(s) | 416, 503, 519, 547, 602, 633, 1110, 1111, 1366 |
| Bme18I | GGWCC | 2 cut(s) | 180, 535 |
| BmeT110I | CYCGRG | 2 cut(s) | 130, 1109 |
| BmgT120I | GGNCC | 6 cut(s) | 180, 271, 316, 418, 535, 1112 |
| BmiI | GGNNCC | 6 cut(s) | 366, 516, 579, 630, 677, 1516 |
| BmrFI | CCNGG | 9 cut(s) | 416, 503, 519, 547, 602, 633, 1110, 1111, 1366 |
| BmrI | ACTGGG | 2 cut(s) | 248, 945 |
| BmsI | GCATC | 2 cut(s) | 1310, 1570 |
| BmuI | ACTGGG | 2 cut(s) | 248, 945 |
| BpiI | GAAGAC | 2 cut(s) | 453, 1073 |
| BpmI | CTGGAG | 3 cut(s) | 398, 472, 1367 |
| Bpu10I | CCTNAGC | 2 cut(s) | 900, 1175 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 407 |
| Bpu14I | TTCGAA | 1 cut(s) | 609 |
| BpuEI | CTTGAG | 4 cut(s) | 179, 197, 947, 1423 |
| BpuMI | CCSGG | 5 cut(s) | 519, 547, 602, 1110, 1111 |
| BsaBI | GATNNNNATC | 1 cut(s) | 61 |
| BsaI | GGTCTC | 2 cut(s) | 115, 1468 |
| BsaJI | CCNNGG | 3 cut(s) | 415, 501, 1109 |
| BsaWI | WCCGGW | 2 cut(s) | 309, 537 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 189, 991 |
| Bse118I | RCCGGY | 2 cut(s) | 268, 580 |
| Bse1I | ACTGG | 4 cut(s) | 243, 455, 940, 1518 |
| Bse3DI | GCAATG | 1 cut(s) | 787 |
| Bse8I | GATNNNNATC | 1 cut(s) | 61 |
| BseBI | CCWGG | 4 cut(s) | 416, 503, 633, 1366 |
| BseDI | CCNNGG | 3 cut(s) | 415, 501, 1109 |
| BseGI | GGATG | 4 cut(s) | 1026, 1030, 1123, 1325 |
| BseJI | GATNNNNATC | 1 cut(s) | 61 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 189, 991 |
| BseMI | GCAATG | 1 cut(s) | 787 |
| BseMII | CTCAG | 5 cut(s) | 398, 785, 914, 1064, 1166 |
| BseNI | ACTGG | 4 cut(s) | 243, 455, 940, 1518 |
| BsePI | GCGCGC | 1 cut(s) | 384 |
| BseRI | GAGGAG | 5 cut(s) | 95, 98, 101, 329, 1010 |
| BseSI | GKGCMC | 2 cut(s) | 680, 749 |
| BseX3I | CGGCCG | 1 cut(s) | 146 |
| BseXI | GCAGC | 3 cut(s) | 818, 1207, 1229 |
| BsgI | GTGCAG | 1 cut(s) | 1236 |
| Bsh1236I | CGCG | 1 cut(s) | 386 |
| Bsh1285I | CGRYCG | 1 cut(s) | 149 |
| BshFI | GGCC | 7 cut(s) | 148, 272, 317, 353, 420, 842, 1114 |
| BshNI | GGYRCC | 3 cut(s) | 514, 577, 675 |
| BsiEI | CGRYCG | 1 cut(s) | 149 |
| BsiHKCI | CYCGRG | 2 cut(s) | 130, 1109 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 189, 991 |
| BsmAI | GTCTC | 3 cut(s) | 115, 1468, 1554 |
| BsnI | GGCC | 7 cut(s) | 148, 272, 317, 353, 420, 842, 1114 |
| Bso31I | GGTCTC | 2 cut(s) | 115, 1468 |
| BsoBI | CYCGRG | 2 cut(s) | 130, 1109 |
| Bsp119I | TTCGAA | 1 cut(s) | 609 |
| Bsp1286I | GDGCHC | 3 cut(s) | 245, 680, 749 |
| Bsp1407I | TGTACA | 1 cut(s) | 908 |
| Bsp143I | GATC | 8 cut(s) | 56, 222, 328, 370, 508, 528, 960, 1012 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 407 |
| BspACI | CCGC | 5 cut(s) | 113, 116, 400, 421, 1040 |
| BspANI | GGCC | 7 cut(s) | 148, 272, 317, 353, 420, 842, 1114 |
| BspCNI | CTCAG | 5 cut(s) | 399, 786, 913, 1065, 1167 |
| BspFNI | CGCG | 1 cut(s) | 386 |
| BspLI | GGNNCC | 6 cut(s) | 366, 516, 579, 630, 677, 1516 |
| BspPI | GGATC | 1 cut(s) | 968 |
| BspT104I | TTCGAA | 1 cut(s) | 609 |
| BspT107I | GGYRCC | 3 cut(s) | 514, 577, 675 |
| BspTNI | GGTCTC | 2 cut(s) | 115, 1468 |
| BsrDI | GCAATG | 1 cut(s) | 787 |
| BsrFI | RCCGGY | 2 cut(s) | 268, 580 |
| BsrGI | TGTACA | 1 cut(s) | 908 |
| BsrI | ACTGG | 4 cut(s) | 243, 455, 940, 1518 |
| BssAI | RCCGGY | 2 cut(s) | 268, 580 |
| BssECI | CCNNGG | 3 cut(s) | 415, 501, 1109 |
| BssHII | GCGCGC | 1 cut(s) | 384 |
| BssMI | GATC | 8 cut(s) | 56, 222, 328, 370, 508, 528, 960, 1012 |
| Bst2UI | CCWGG | 4 cut(s) | 416, 503, 633, 1366 |
| Bst4CI | ACNGT | 2 cut(s) | 620, 1247 |
| Bst6I | CTCTTC | 5 cut(s) | 72, 735, 759, 1181, 1497 |
| BstAUI | TGTACA | 1 cut(s) | 908 |
| BstBI | TTCGAA | 1 cut(s) | 609 |
| BstC8I | GCNNGC | 6 cut(s) | 94, 245, 270, 386, 398, 1278 |
| BstDEI | CTNAG | 8 cut(s) | 407, 656, 728, 794, 900, 1073, 1175, 1385 |
| BstEII | GGTNACC | 1 cut(s) | 596 |
| BstF5I | GGATG | 4 cut(s) | 1026, 1030, 1123, 1325 |
| BstFNI | CGCG | 1 cut(s) | 386 |
| BstH2I | RGCGCY | 1 cut(s) | 1046 |
| BstHHI | GCGC | 3 cut(s) | 386, 388, 1045 |
| BstKTI | GATC | 8 cut(s) | 59, 225, 331, 373, 511, 531, 963, 1015 |
| BstMAI | GTCTC | 3 cut(s) | 115, 1468, 1554 |
| BstMBI | GATC | 8 cut(s) | 56, 222, 328, 370, 508, 528, 960, 1012 |
| BstMCI | CGRYCG | 1 cut(s) | 149 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 113, 154, 385, 417, 922, 1139 |
| BstNI | CCWGG | 4 cut(s) | 416, 503, 633, 1366 |
| BstPI | GGTNACC | 1 cut(s) | 596 |
| BstSCI | CCNGG | 9 cut(s) | 414, 501, 517, 545, 600, 631, 1108, 1109, 1364 |
| BstSLI | GKGCMC | 2 cut(s) | 680, 749 |
| BstUI | CGCG | 1 cut(s) | 386 |
| BstV1I | GCAGC | 3 cut(s) | 818, 1207, 1229 |
| BstV2I | GAAGAC | 2 cut(s) | 453, 1073 |
| BstZI | CGGCCG | 1 cut(s) | 146 |
| BsuRI | GGCC | 7 cut(s) | 148, 272, 317, 353, 420, 842, 1114 |
| BtsCI | GGATG | 4 cut(s) | 1026, 1030, 1123, 1325 |
| BtsI | GCAGTG | 1 cut(s) | 983 |
| BtsIMutI | CAGTG | 2 cut(s) | 524, 983 |
| Cac8I | GCNNGC | 6 cut(s) | 94, 245, 270, 386, 398, 1278 |
| CfoI | GCGC | 3 cut(s) | 386, 388, 1045 |
| Cfr10I | RCCGGY | 2 cut(s) | 268, 580 |
| Cfr13I | GGNCC | 6 cut(s) | 180, 271, 316, 418, 535, 1112 |
| Cfr9I | CCCGGG | 1 cut(s) | 1109 |
| CpoI | CGGWCCG | 1 cut(s) | 535 |
| Csp6I | GTAC | 2 cut(s) | 515, 909 |
| CspI | CGGWCCG | 1 cut(s) | 535 |
| CviAII | CATG | 3 cut(s) | 226, 563, 1398 |
| CviQI | GTAC | 2 cut(s) | 515, 909 |
| DdeI | CTNAG | 8 cut(s) | 407, 656, 728, 794, 900, 1073, 1175, 1385 |
| DpnI | GATC | 8 cut(s) | 58, 224, 330, 372, 510, 530, 962, 1014 |
| DpnII | GATC | 8 cut(s) | 56, 222, 328, 370, 508, 528, 960, 1012 |
| EaeI | YGGCCR | 3 cut(s) | 146, 351, 840 |
| EagI | CGGCCG | 1 cut(s) | 146 |
| Eam1104I | CTCTTC | 5 cut(s) | 72, 735, 759, 1181, 1497 |
| EarI | CTCTTC | 5 cut(s) | 72, 735, 759, 1181, 1497 |
| EciI | GGCGGA | 1 cut(s) | 131 |
| EclXI | CGGCCG | 1 cut(s) | 146 |
| Eco24I | GRGCYC | 1 cut(s) | 245 |
| Eco31I | GGTCTC | 2 cut(s) | 115, 1468 |
| Eco32I | GATATC | 1 cut(s) | 880 |
| Eco47I | GGWCC | 2 cut(s) | 180, 535 |
| Eco52I | CGGCCG | 1 cut(s) | 146 |
| Eco88I | CYCGRG | 2 cut(s) | 130, 1109 |
| Eco91I | GGTNACC | 1 cut(s) | 596 |
| EcoO65I | GGTNACC | 1 cut(s) | 596 |
| EcoRI | GAATTC | 1 cut(s) | 541 |
| EcoRII | CCWGG | 4 cut(s) | 414, 501, 631, 1364 |
| EcoRV | GATATC | 1 cut(s) | 880 |
| EcoT38I | GRGCYC | 1 cut(s) | 245 |
| FaeI | CATG | 3 cut(s) | 229, 566, 1401 |
| FatI | CATG | 3 cut(s) | 225, 562, 1397 |
| FbaI | TGATCA | 2 cut(s) | 222, 1012 |
| Fnu4HI | GCNGC | 6 cut(s) | 114, 421, 807, 1041, 1218, 1221 |
| FokI | GGATG | 4 cut(s) | 1033, 1037, 1130, 1332 |
| FriOI | GRGCYC | 1 cut(s) | 245 |
| Fsp4HI | GCNGC | 6 cut(s) | 114, 421, 807, 1041, 1218, 1221 |
| FspBI | CTAG | 4 cut(s) | 695, 711, 1224, 1313 |
| GlaI | GCGC | 3 cut(s) | 385, 387, 1044 |
| GluI | GCNGC | 6 cut(s) | 114, 421, 807, 1041, 1218, 1221 |
| GsuI | CTGGAG | 3 cut(s) | 398, 472, 1367 |
| HaeII | RGCGCY | 1 cut(s) | 1046 |
| HaeIII | GGCC | 7 cut(s) | 148, 272, 317, 353, 420, 842, 1114 |
| HhaI | GCGC | 3 cut(s) | 386, 388, 1045 |
| Hin1II | CATG | 3 cut(s) | 229, 566, 1401 |
| Hin6I | GCGC | 3 cut(s) | 384, 386, 1043 |
| HinP1I | GCGC | 3 cut(s) | 384, 386, 1043 |
| HincII | GTYRAC | 1 cut(s) | 888 |
| HindII | GTYRAC | 1 cut(s) | 888 |
| HindIII | AAGCTT | 2 cut(s) | 923, 949 |
| HinfI | GANTC | 8 cut(s) | 48, 185, 254, 464, 559, 1069, 1349, 1357 |
| HphI | GGTGA | 5 cut(s) | 448, 590, 647, 931, 1309 |
| Hpy166II | GTNNAC | 3 cut(s) | 524, 888, 909 |
| Hpy188I | TCNGA | 9 cut(s) | 184, 298, 307, 328, 375, 492, 535, 877, 1074 |
| Hpy188III | TCNNGA | 8 cut(s) | 196, 214, 258, 758, 1241, 1313, 1346, 1549 |
| Hpy8I | GTNNAC | 3 cut(s) | 524, 888, 909 |
| Hpy99I | CGWCG | 1 cut(s) | 106 |
| HpyAV | CCTTC | 4 cut(s) | 433, 1310, 1334, 1363 |
| HpyCH4III | ACNGT | 2 cut(s) | 620, 1247 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 113, 154, 385, 417, 922, 1139 |
| HpyF3I | CTNAG | 8 cut(s) | 407, 656, 728, 794, 900, 1073, 1175, 1385 |
| Hsp92II | CATG | 3 cut(s) | 229, 566, 1401 |
| HspAI | GCGC | 3 cut(s) | 384, 386, 1043 |
| KpnI | GGTACC | 1 cut(s) | 518 |
| KroI | GCCGGC | 1 cut(s) | 268 |
| KroNI | GCCGGC | 1 cut(s) | 270 |
| Ksp22I | TGATCA | 2 cut(s) | 222, 1012 |
| Kzo9I | GATC | 8 cut(s) | 56, 222, 328, 370, 508, 528, 960, 1012 |
| LmnI | GCTCC | 4 cut(s) | 364, 453, 1372, 1588 |
| Lsp1109I | GCAGC | 3 cut(s) | 818, 1207, 1229 |
| LweI | GCATC | 2 cut(s) | 1310, 1570 |
| MaeI | CTAG | 4 cut(s) | 695, 711, 1224, 1313 |
| MaeIII | GTNAC | 2 cut(s) | 596, 1297 |
| MalI | GATC | 8 cut(s) | 58, 224, 330, 372, 510, 530, 962, 1014 |
| MboI | GATC | 8 cut(s) | 56, 222, 328, 370, 508, 528, 960, 1012 |
| MfeI | CAATTG | 2 cut(s) | 320, 969 |
| MhlI | GDGCHC | 3 cut(s) | 245, 680, 749 |
| MlsI | TGGCCA | 2 cut(s) | 353, 842 |
| MluNI | TGGCCA | 2 cut(s) | 353, 842 |
| MlyI | GAGTC | 4 cut(s) | 194, 263, 1063, 1358 |
| MmeI | TCCRAC | 3 cut(s) | 744, 972, 1492 |
| Mox20I | TGGCCA | 2 cut(s) | 353, 842 |
| MroNI | GCCGGC | 1 cut(s) | 268 |
| MscI | TGGCCA | 2 cut(s) | 353, 842 |
| MslI | CAYNNNNRTG | 2 cut(s) | 230, 1463 |
| Msp20I | TGGCCA | 2 cut(s) | 353, 842 |
| MspA1I | CMGCKG | 2 cut(s) | 1174, 1220 |
| MspR9I | CCNGG | 9 cut(s) | 416, 503, 519, 547, 602, 633, 1110, 1111, 1366 |
| MunI | CAATTG | 2 cut(s) | 320, 969 |
| MvaI | CCWGG | 4 cut(s) | 416, 503, 633, 1366 |
| MvnI | CGCG | 1 cut(s) | 386 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 113, 154, 385, 417, 922, 1139 |
| NaeI | GCCGGC | 1 cut(s) | 270 |
| NciI | CCSGG | 5 cut(s) | 519, 547, 602, 1110, 1111 |
| NdeII | GATC | 8 cut(s) | 56, 222, 328, 370, 508, 528, 960, 1012 |
| NgoMIV | GCCGGC | 1 cut(s) | 268 |
| NlaIII | CATG | 3 cut(s) | 229, 566, 1401 |
| NlaIV | GGNNCC | 6 cut(s) | 366, 516, 579, 630, 677, 1516 |
| NmeAIII | GCCGAG | 1 cut(s) | 405 |
| NmuCI | GTSAC | 2 cut(s) | 596, 1297 |
| NspV | TTCGAA | 1 cut(s) | 609 |
| PauI | GCGCGC | 1 cut(s) | 384 |
| PdiI | GCCGGC | 1 cut(s) | 270 |
| PfeI | GAWTC | 4 cut(s) | 48, 464, 559, 1357 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 991 |
| PfoI | TCCNGGA | 2 cut(s) | 545, 1364 |
| PkrI | GCNGC | 6 cut(s) | 115, 422, 808, 1042, 1219, 1222 |
| PleI | GAGTC | 4 cut(s) | 193, 262, 1063, 1357 |
| PpsI | GAGTC | 4 cut(s) | 193, 262, 1063, 1357 |
| Psp6I | CCWGG | 4 cut(s) | 414, 501, 631, 1364 |
| PspEI | GGTNACC | 1 cut(s) | 596 |
| PspGI | CCWGG | 4 cut(s) | 414, 501, 631, 1364 |
| PspN4I | GGNNCC | 6 cut(s) | 366, 516, 579, 630, 677, 1516 |
| PspPI | GGNCC | 6 cut(s) | 180, 271, 316, 418, 535, 1112 |
| PteI | GCGCGC | 1 cut(s) | 384 |
| PvuII | CAGCTG | 2 cut(s) | 1174, 1220 |
| RsaI | GTAC | 2 cut(s) | 516, 910 |
| RsaNI | GTAC | 2 cut(s) | 515, 909 |
| RseI | CAYNNNNRTG | 2 cut(s) | 230, 1463 |
| Rsr2I | CGGWCCG | 1 cut(s) | 535 |
| RsrII | CGGWCCG | 1 cut(s) | 535 |
| SatI | GCNGC | 6 cut(s) | 114, 421, 807, 1041, 1218, 1221 |
| Sau3AI | GATC | 8 cut(s) | 56, 222, 328, 370, 508, 528, 960, 1012 |
| Sau96I | GGNCC | 6 cut(s) | 180, 271, 316, 418, 535, 1112 |
| SchI | GAGTC | 4 cut(s) | 194, 263, 1063, 1358 |
| ScrFI | CCNGG | 9 cut(s) | 416, 503, 519, 547, 602, 633, 1110, 1111, 1366 |
| SduI | GDGCHC | 3 cut(s) | 245, 680, 749 |
| SfaNI | GCATC | 2 cut(s) | 1310, 1570 |
| SfuI | TTCGAA | 1 cut(s) | 609 |
| SinI | GGWCC | 2 cut(s) | 180, 535 |
| SmaI | CCCGGG | 1 cut(s) | 1111 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 230, 1463 |
| SmlI | CTYRAG | 4 cut(s) | 194, 212, 926, 1438 |
| SmoI | CTYRAG | 4 cut(s) | 194, 212, 926, 1438 |
| SsiI | CCGC | 5 cut(s) | 113, 116, 400, 421, 1040 |
| SspMI | CTAG | 4 cut(s) | 695, 711, 1224, 1313 |
| StyD4I | CCNGG | 9 cut(s) | 414, 501, 517, 545, 600, 631, 1108, 1109, 1364 |
| TaaI | ACNGT | 2 cut(s) | 620, 1247 |
| TaqI | TCGA | 3 cut(s) | 342, 462, 609 |
| TatI | WGTACW | 1 cut(s) | 908 |
| TauI | GCSGC | 3 cut(s) | 116, 423, 1043 |
| TfiI | GAWTC | 4 cut(s) | 48, 464, 559, 1357 |
| TscAI | CASTG | 2 cut(s) | 531, 983 |
| TseFI | GTSAC | 2 cut(s) | 596, 1297 |
| TseI | GCWGC | 3 cut(s) | 806, 1217, 1220 |
| Tsp45I | GTSAC | 2 cut(s) | 596, 1297 |
| TspDTI | ATGAA | 1 cut(s) | 1481 |
| TspGWI | ACGGA | 1 cut(s) | 1352 |
| TspMI | CCCGGG | 1 cut(s) | 1109 |
| TspRI | CASTG | 2 cut(s) | 531, 983 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 991 |
| VpaK11BI | GGWCC | 2 cut(s) | 180, 535 |
| XapI | RAATTY | 5 cut(s) | 300, 345, 541, 817, 1060 |
| XbaI | TCTAGA | 1 cut(s) | 1312 |
| XmaI | CCCGGG | 1 cut(s) | 1109 |
| XspI | CTAG | 4 cut(s) | 695, 711, 1224, 1313 |