Rh1CG368900

f-box protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
63967340 .. 63968635
1296 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG368900.1

Sequence Viewer

Length: 1296 bp
ATGCAGAAAGAAAACGACCCAAGAAGAACAAGAATGTTGAAGATGAGATTCAAAAGATCAGTATCAGCAAAAGAAGAAGAGGAGGAGGAGGGTCGCAAAACGACGGCGTTTGCGGCGGAGAGACCCGACCCGAGAAGCCCATTACGGCCGTTGAAGCTGAACAGGAGGTCGGCGAGTTGGTCTGAGTCGTGGCTCAAGAACACTACTTCACTCAAGAATGTGATCATGGCTATGCAACTGGGCTCGCCCAAAGAGTCCAGATTGAAGCTGGCCCAGAAAACCCTAAACCCTAATTCTGAAATTTCTGACCGGACGGCCCAATTGTCCGATCAAATCCTCCTCGAAATTCTGGCCAAACTGCCGGAGCCTGATCGGAAGCCGAGCGCTCTGGTCTGCAAGCGGTGGCTGAGCCTCCAGGGCCGCCTTGTGAGGTCGGTGAAGGTTAAAGACTGGAGCTTTGTCGAATCGGGTCGGGTTATTTCAAGGTTTCCGAGCTTGACCGAGGTTGATCTGGTACCCGGTTCACTGATCTCGGACCGGAATTCCGGGATTTTGCTGAATAATGGTGGGTTTTCGGTGCCGGTTGCCTGTTCTGGTCACCGGGTTTTTGAAGCTGACTGTGATTTGGTTCCTGGTGAGGTTGTGGATAGAGGGCTTAGTGAGTTAGGGAGTGGGTGCCCCAATTTGAAGAAGCTGGTTGTGATTGGGGCTAGTGAGTTAGGGTTGCTAAATATAGCAGAAGAGTGCCCAACTCTTCAAGAGTTGGAGTTGCACAAGTGCAATGACAATTTGCTGAGAGGCATTGCAGCTTGTGAGAATTTGCAAGTGTTGAAGTTGGTGGCAAATGTGGAGGGGCTATATGGTTCTGTGGTTTCGGATATCGGGTTGACGATTTTGGCTCAGGGGTGTACAAGGCTGGTGAAGCTTGAGCTTACTGGGTGTGAGGGAAGCTTTGATGGGATCAAGGCAATTGGGCAGTGTTGCCAGATGTTGGAGGAGTTGAGTTTCTGTGATCACAGGATGGATGGTGGGTGGTTGGCTGCGCTTTCGTATTGTGAGAATTTGAAGACTCTGAGGTTTCAATCTTGTAAGAGGATTGAGTGTGTTCCCGGGCCGGATGAGTATTTGGGTGCTTGCCCTGCTTTGGCGAACTTGCATTTGCAGAAGTGTCAGCTGAGGGATAAGAAGAGTGTGAGAGCTTTGTTTATGGTGTGTGCAGCTGCTAGAGAGATTGTGTTTCAGGACTGTTGGGGATTGGACAATGATATGTTCAGGCTGGCAAGTATTTGCAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

431

Amino Acids

47.79

Weight (kDa)

8.32

Isoelectric Point (pI)

52.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1281
Acc65I GGTACC 1 cut(s) 514
AccB1I GGYRCC 3 cut(s) 514, 577, 675
AccB7I CCANNNNNTGG 1 cut(s) 991
AciI CCGC 4 cut(s) 113, 116, 400, 421
AclWI GGATC 1 cut(s) 968
AcoI YGGCCR 2 cut(s) 146, 351
AcsI RAATTY 5 cut(s) 300, 345, 541, 817, 1060
AfaI GTAC 2 cut(s) 516, 910
AfeI AGCGCT 1 cut(s) 385
AfiI CCNNNNNNNGG 2 cut(s) 991, 1144
AjnI CCWGG 2 cut(s) 414, 631
Alw26I GTCTC 1 cut(s) 115
AlwI GGATC 1 cut(s) 968
Ama87I CYCGRG 2 cut(s) 130, 1109
Aor51HI AGCGCT 1 cut(s) 385
AoxI GGCC 6 cut(s) 146, 270, 315, 351, 418, 1112
ApeKI GCWGC 4 cut(s) 806, 1040, 1217, 1220
ApoI RAATTY 5 cut(s) 300, 345, 541, 817, 1060
ArsI GACNNNNNNTTYG 2 cut(s) 440, 472
Asp718I GGTACC 1 cut(s) 514
AspLEI GCGC 2 cut(s) 386, 1045
AspS9I GGNCC 5 cut(s) 271, 316, 418, 535, 1112
AsuC2I CCSGG 5 cut(s) 519, 547, 602, 1110, 1111
AsuHPI GGTGA 4 cut(s) 448, 590, 647, 931
AvaI CYCGRG 2 cut(s) 130, 1109
AvaII GGWCC 1 cut(s) 535
BaeGI GKGCMC 2 cut(s) 680, 749
BalI TGGCCA 1 cut(s) 353
BanI GGYRCC 3 cut(s) 514, 577, 675
BanII GRGCYC 1 cut(s) 245
BbsI GAAGAC 1 cut(s) 1073
BbvCI CCTCAGC 1 cut(s) 1175
BbvI GCAGC 4 cut(s) 818, 1027, 1207, 1229
BccI CCATC 3 cut(s) 950, 1015, 1019
BceAI ACGGC 4 cut(s) 120, 133, 161, 330
BciT130I CCWGG 2 cut(s) 416, 633
BclI TGATCA 2 cut(s) 222, 1012
BcnI CCSGG 5 cut(s) 519, 547, 602, 1110, 1111
BcoDI GTCTC 1 cut(s) 115
BfaI CTAG 2 cut(s) 711, 1224
BfoI RGCGCY 1 cut(s) 387
BfuAI ACCTGC 1 cut(s) 1281
BglI GCCNNNNNGGC 1 cut(s) 417
BisI GCNGC 6 cut(s) 114, 421, 807, 1041, 1218, 1221
BlpI GCTNAGC 1 cut(s) 407
BlsI GCNGC 6 cut(s) 115, 422, 808, 1042, 1219, 1222
Bme1390I CCNGG 7 cut(s) 416, 519, 547, 602, 633, 1110, 1111
Bme18I GGWCC 1 cut(s) 535
BmeT110I CYCGRG 2 cut(s) 130, 1109
BmgT120I GGNCC 5 cut(s) 271, 316, 418, 535, 1112
BmiI GGNNCC 5 cut(s) 366, 516, 579, 630, 677
BmrFI CCNGG 7 cut(s) 416, 519, 547, 602, 633, 1110, 1111
BmrI ACTGGG 2 cut(s) 248, 945
BmuI ACTGGG 2 cut(s) 248, 945
BpiI GAAGAC 1 cut(s) 1073
BpmI CTGGAG 2 cut(s) 398, 472
Bpu10I CCTNAGC 2 cut(s) 900, 1175
Bpu1102I GCTNAGC 1 cut(s) 407
BpuEI CTTGAG 3 cut(s) 179, 197, 947
BpuMI CCSGG 5 cut(s) 519, 547, 602, 1110, 1111
BsaBI GATNNNNATC 1 cut(s) 61
BsaI GGTCTC 1 cut(s) 115
BsaJI CCNNGG 3 cut(s) 415, 501, 1109
BsaWI WCCGGW 2 cut(s) 309, 537
Bsc4I CCNNNNNNNGG 2 cut(s) 991, 1144
Bse118I RCCGGY 1 cut(s) 580
Bse1I ACTGG 3 cut(s) 243, 455, 940
Bse3DI GCAATG 2 cut(s) 787, 801
Bse8I GATNNNNATC 1 cut(s) 61
BseBI CCWGG 2 cut(s) 416, 633
BseDI CCNNGG 3 cut(s) 415, 501, 1109
BseGI GGATG 3 cut(s) 1026, 1030, 1123
BseJI GATNNNNATC 1 cut(s) 61
BseLI CCNNNNNNNGG 2 cut(s) 991, 1144
BseMI GCAATG 2 cut(s) 787, 801
BseMII CTCAG 6 cut(s) 174, 398, 785, 914, 1064, 1166
BseNI ACTGG 3 cut(s) 243, 455, 940
BseRI GAGGAG 5 cut(s) 95, 98, 101, 329, 1010
BseSI GKGCMC 2 cut(s) 680, 749
BseX3I CGGCCG 1 cut(s) 146
BseXI GCAGC 4 cut(s) 818, 1027, 1207, 1229
BsgI GTGCAG 1 cut(s) 1236
Bsh1285I CGRYCG 1 cut(s) 149
BshFI GGCC 6 cut(s) 148, 272, 317, 353, 420, 1114
BshNI GGYRCC 3 cut(s) 514, 577, 675
BsiEI CGRYCG 1 cut(s) 149
BsiHKCI CYCGRG 2 cut(s) 130, 1109
BsiSI CCGG 9 cut(s) 310, 362, 519, 538, 546, 581, 601, 1110, 1115
BslI CCNNNNNNNGG 2 cut(s) 991, 1144
BsmAI GTCTC 1 cut(s) 115
BsnI GGCC 6 cut(s) 148, 272, 317, 353, 420, 1114
Bso31I GGTCTC 1 cut(s) 115
BsoBI CYCGRG 2 cut(s) 130, 1109
Bsp1286I GDGCHC 3 cut(s) 245, 680, 749
Bsp1407I TGTACA 1 cut(s) 908
Bsp143I GATC 8 cut(s) 56, 222, 328, 370, 508, 528, 960, 1012
Bsp1720I GCTNAGC 1 cut(s) 407
BspACI CCGC 4 cut(s) 113, 116, 400, 421
BspANI GGCC 6 cut(s) 148, 272, 317, 353, 420, 1114
BspCNI CTCAG 6 cut(s) 175, 399, 786, 913, 1065, 1167
BspLI GGNNCC 5 cut(s) 366, 516, 579, 630, 677
BspMI ACCTGC 1 cut(s) 1281
BspPI GGATC 1 cut(s) 968
BspT107I GGYRCC 3 cut(s) 514, 577, 675
BspTNI GGTCTC 1 cut(s) 115
BsrDI GCAATG 2 cut(s) 787, 801
BsrFI RCCGGY 1 cut(s) 580
BsrGI TGTACA 1 cut(s) 908
BsrI ACTGG 3 cut(s) 243, 455, 940
BssAI RCCGGY 1 cut(s) 580
BssECI CCNNGG 3 cut(s) 415, 501, 1109
BssMI GATC 8 cut(s) 56, 222, 328, 370, 508, 528, 960, 1012
Bst2UI CCWGG 2 cut(s) 416, 633
Bst4CI ACNGT 2 cut(s) 620, 1247
Bst6I CTCTTC 4 cut(s) 72, 735, 759, 1181
BstAUI TGTACA 1 cut(s) 908
BstC8I GCNNGC 5 cut(s) 245, 270, 398, 1135, 1278
BstDEI CTNAG 7 cut(s) 183, 407, 656, 794, 900, 1073, 1175
BstEII GGTNACC 1 cut(s) 596
BstF5I GGATG 3 cut(s) 1026, 1030, 1123
BstH2I RGCGCY 1 cut(s) 387
BstHHI GCGC 2 cut(s) 386, 1045
BstKTI GATC 8 cut(s) 59, 225, 331, 373, 511, 531, 963, 1015
BstMAI GTCTC 1 cut(s) 115
BstMBI GATC 8 cut(s) 56, 222, 328, 370, 508, 528, 960, 1012
BstMCI CGRYCG 1 cut(s) 149
BstMWI GCNNNNNNNGC 5 cut(s) 113, 154, 417, 922, 1139
BstNI CCWGG 2 cut(s) 416, 633
BstPI GGTNACC 1 cut(s) 596
BstSCI CCNGG 7 cut(s) 414, 517, 545, 600, 631, 1108, 1109
BstSLI GKGCMC 2 cut(s) 680, 749
BstV1I GCAGC 4 cut(s) 818, 1027, 1207, 1229
BstV2I GAAGAC 1 cut(s) 1073
BstZI CGGCCG 1 cut(s) 146
BsuRI GGCC 6 cut(s) 148, 272, 317, 353, 420, 1114
BtsCI GGATG 3 cut(s) 1026, 1030, 1123
BtsI GCAGTG 1 cut(s) 983
BtsIMutI CAGTG 2 cut(s) 524, 983
BveI ACCTGC 1 cut(s) 1281
Cac8I GCNNGC 5 cut(s) 245, 270, 398, 1135, 1278
CfoI GCGC 2 cut(s) 386, 1045
Cfr10I RCCGGY 1 cut(s) 580
Cfr13I GGNCC 5 cut(s) 271, 316, 418, 535, 1112
Cfr9I CCCGGG 1 cut(s) 1109
CpoI CGGWCCG 1 cut(s) 535
Csp6I GTAC 2 cut(s) 515, 909
CspI CGGWCCG 1 cut(s) 535
CviAII CATG 1 cut(s) 226
CviQI GTAC 2 cut(s) 515, 909
DdeI CTNAG 7 cut(s) 183, 407, 656, 794, 900, 1073, 1175
DpnI GATC 8 cut(s) 58, 224, 330, 372, 510, 530, 962, 1014
DpnII GATC 8 cut(s) 56, 222, 328, 370, 508, 528, 960, 1012
EaeI YGGCCR 2 cut(s) 146, 351
EagI CGGCCG 1 cut(s) 146
Eam1104I CTCTTC 4 cut(s) 72, 735, 759, 1181
EarI CTCTTC 4 cut(s) 72, 735, 759, 1181
EciI GGCGGA 1 cut(s) 131
EclXI CGGCCG 1 cut(s) 146
Eco24I GRGCYC 1 cut(s) 245
Eco31I GGTCTC 1 cut(s) 115
Eco32I GATATC 1 cut(s) 880
Eco47I GGWCC 1 cut(s) 535
Eco47III AGCGCT 1 cut(s) 385
Eco52I CGGCCG 1 cut(s) 146
Eco88I CYCGRG 2 cut(s) 130, 1109
Eco91I GGTNACC 1 cut(s) 596
EcoO65I GGTNACC 1 cut(s) 596
EcoRI GAATTC 1 cut(s) 541
EcoRII CCWGG 2 cut(s) 414, 631
EcoRV GATATC 1 cut(s) 880
EcoT38I GRGCYC 1 cut(s) 245
FaeI CATG 1 cut(s) 229
FaiI YATR 7 cut(s) 227, 233, 734, 859, 861, 1208, 1268
FatI CATG 1 cut(s) 225
FbaI TGATCA 2 cut(s) 222, 1012
Fnu4HI GCNGC 6 cut(s) 114, 421, 807, 1041, 1218, 1221
FokI GGATG 3 cut(s) 1033, 1037, 1130
FriOI GRGCYC 1 cut(s) 245
Fsp4HI GCNGC 6 cut(s) 114, 421, 807, 1041, 1218, 1221
FspBI CTAG 2 cut(s) 711, 1224
GlaI GCGC 2 cut(s) 385, 1044
GluI GCNGC 6 cut(s) 114, 421, 807, 1041, 1218, 1221
GsuI CTGGAG 2 cut(s) 398, 472
HaeII RGCGCY 1 cut(s) 387
HaeIII GGCC 6 cut(s) 148, 272, 317, 353, 420, 1114
HapII CCGG 9 cut(s) 310, 362, 519, 538, 546, 581, 601, 1110, 1115
HhaI GCGC 2 cut(s) 386, 1045
Hin1II CATG 1 cut(s) 229
Hin6I GCGC 2 cut(s) 384, 1043
HinP1I GCGC 2 cut(s) 384, 1043
HincII GTYRAC 1 cut(s) 888
HindII GTYRAC 1 cut(s) 888
HindIII AAGCTT 2 cut(s) 923, 949
HinfI GANTC 5 cut(s) 48, 185, 254, 464, 1069
HpaII CCGG 9 cut(s) 310, 362, 519, 538, 546, 581, 601, 1110, 1115
HphI GGTGA 4 cut(s) 448, 590, 647, 931
Hpy166II GTNNAC 3 cut(s) 524, 888, 909
Hpy188I TCNGA 9 cut(s) 184, 298, 307, 328, 375, 492, 535, 877, 1074
Hpy188III TCNNGA 5 cut(s) 196, 214, 258, 758, 1241
Hpy8I GTNNAC 3 cut(s) 524, 888, 909
Hpy99I CGWCG 1 cut(s) 106
HpyAV CCTTC 1 cut(s) 433
HpyCH4III ACNGT 2 cut(s) 620, 1247
HpyF10VI GCNNNNNNNGC 5 cut(s) 113, 154, 417, 922, 1139
HpyF3I CTNAG 7 cut(s) 183, 407, 656, 794, 900, 1073, 1175
Hsp92II CATG 1 cut(s) 229
HspAI GCGC 2 cut(s) 384, 1043
KpnI GGTACC 1 cut(s) 518
Ksp22I TGATCA 2 cut(s) 222, 1012
Kzo9I GATC 8 cut(s) 56, 222, 328, 370, 508, 528, 960, 1012
LmnI GCTCC 2 cut(s) 364, 453
Lsp1109I GCAGC 4 cut(s) 818, 1027, 1207, 1229
MaeI CTAG 2 cut(s) 711, 1224
MaeIII GTNAC 1 cut(s) 596
MalI GATC 8 cut(s) 58, 224, 330, 372, 510, 530, 962, 1014
MboI GATC 8 cut(s) 56, 222, 328, 370, 508, 528, 960, 1012
MboII GAAGA 9 cut(s) 36, 52, 86, 89, 700, 746, 752, 1078, 1198
MfeI CAATTG 2 cut(s) 320, 969
MhlI GDGCHC 3 cut(s) 245, 680, 749
MlsI TGGCCA 1 cut(s) 353
MluNI TGGCCA 1 cut(s) 353
MlyI GAGTC 3 cut(s) 194, 263, 1063
MmeI TCCRAC 2 cut(s) 744, 972
Mox20I TGGCCA 1 cut(s) 353
MscI TGGCCA 1 cut(s) 353
MseI TTAA 1 cut(s) 444
MslI CAYNNNNRTG 1 cut(s) 230
Msp20I TGGCCA 1 cut(s) 353
MspA1I CMGCKG 2 cut(s) 1174, 1220
MspI CCGG 9 cut(s) 310, 362, 519, 538, 546, 581, 601, 1110, 1115
MspR9I CCNGG 7 cut(s) 416, 519, 547, 602, 633, 1110, 1111
MunI CAATTG 2 cut(s) 320, 969
MvaI CCWGG 2 cut(s) 416, 633
MwoI GCNNNNNNNGC 5 cut(s) 113, 154, 417, 922, 1139
NciI CCSGG 5 cut(s) 519, 547, 602, 1110, 1111
NdeII GATC 8 cut(s) 56, 222, 328, 370, 508, 528, 960, 1012
NlaIII CATG 1 cut(s) 229
NlaIV GGNNCC 5 cut(s) 366, 516, 579, 630, 677
NmeAIII GCCGAG 1 cut(s) 405
NmuCI GTSAC 1 cut(s) 596
PfeI GAWTC 2 cut(s) 48, 464
PflMI CCANNNNNTGG 1 cut(s) 991
PfoI TCCNGGA 1 cut(s) 545
PkrI GCNGC 6 cut(s) 115, 422, 808, 1042, 1219, 1222
PleI GAGTC 3 cut(s) 193, 262, 1063
PpsI GAGTC 3 cut(s) 193, 262, 1063
Psp6I CCWGG 2 cut(s) 414, 631
PspEI GGTNACC 1 cut(s) 596
PspGI CCWGG 2 cut(s) 414, 631
PspN4I GGNNCC 5 cut(s) 366, 516, 579, 630, 677
PspPI GGNCC 5 cut(s) 271, 316, 418, 535, 1112
PvuII CAGCTG 2 cut(s) 1174, 1220
RsaI GTAC 2 cut(s) 516, 910
RsaNI GTAC 2 cut(s) 515, 909
RseI CAYNNNNRTG 1 cut(s) 230
Rsr2I CGGWCCG 1 cut(s) 535
RsrII CGGWCCG 1 cut(s) 535
SaqAI TTAA 1 cut(s) 444
SatI GCNGC 6 cut(s) 114, 421, 807, 1041, 1218, 1221
Sau3AI GATC 8 cut(s) 56, 222, 328, 370, 508, 528, 960, 1012
Sau96I GGNCC 5 cut(s) 271, 316, 418, 535, 1112
SchI GAGTC 3 cut(s) 194, 263, 1063
ScrFI CCNGG 7 cut(s) 416, 519, 547, 602, 633, 1110, 1111
SduI GDGCHC 3 cut(s) 245, 680, 749
SinI GGWCC 1 cut(s) 535
SmaI CCCGGG 1 cut(s) 1111
SmiMI CAYNNNNRTG 1 cut(s) 230
SmlI CTYRAG 3 cut(s) 194, 212, 926
SmoI CTYRAG 3 cut(s) 194, 212, 926
SsiI CCGC 4 cut(s) 113, 116, 400, 421
SspMI CTAG 2 cut(s) 711, 1224
StyD4I CCNGG 7 cut(s) 414, 517, 545, 600, 631, 1108, 1109
TaaI ACNGT 2 cut(s) 620, 1247
TaqI TCGA 2 cut(s) 342, 462
TaqII GACCGA 1 cut(s) 515
TatI WGTACW 1 cut(s) 908
TauI GCSGC 2 cut(s) 116, 423
TfiI GAWTC 2 cut(s) 48, 464
Tru1I TTAA 1 cut(s) 444
Tru9I TTAA 1 cut(s) 444
TscAI CASTG 2 cut(s) 531, 983
TseFI GTSAC 1 cut(s) 596
TseI GCWGC 4 cut(s) 806, 1040, 1217, 1220
Tsp45I GTSAC 1 cut(s) 596
TspMI CCCGGG 1 cut(s) 1109
TspRI CASTG 2 cut(s) 531, 983
Van91I CCANNNNNTGG 1 cut(s) 991
VpaK11BI GGWCC 1 cut(s) 535
XapI RAATTY 5 cut(s) 300, 345, 541, 817, 1060
XcmI CCANNNNNNNNNTGG 1 cut(s) 265
XmaI CCCGGG 1 cut(s) 1109
XspI CTAG 2 cut(s) 711, 1224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.