Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005289

Physical Location & Seq

Genomic Coordinates Forward (+)

21450358 .. 21454289

Gene Structure 3932 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G164800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGGCGTCGCCGTCCTGCTTCGAAACGCCGTCGTCTGCCCCTTCTTCTTCTTCAAAACTAGAGTGGGGCGAGAAGGTCTCGGACAAGGTGTTCTCACTCTACAACTCTCTTCCCAAGAAAGGCAAGCCTCAGGGTCGCGAAGTCACCGTCTTGGCCGCTTTCCTCGTTTCCTCTCCTTCTCAAGAATTGGAAGTTGTCGCGTTGGGAACTGGGACCAAATGTCTTGGGAGTTCACTCTTGAGCTCCAACGGTGATGTCGTCAATGATTCCCACGCCGAGATTATAGCTCGAAGATCTTTACTGAGGTTCTTCTATGCACAGATTCAGTGTCTTACTCAAGTTTATAGTAAGCAAAGTGATAGCAATGGAAGCACACAAATGCAAAATGGTGATGCCAAAAACTTGCTTTTTGAATTGGACCCTAATGGTGATGGCCAAGGAAAATACAAACTGAGGAAGGGTTTGCAATTACACTTGTACATATCACAACTACCATGTGGGGTTGCATCTCCGAGTTCACTGTTGTCTCCCCCAAAAAACATCTCACCAACAGAACGGGGTTCATCTTTGGACGAGCTTAATGTTTCAATAAATGAAGAGGCTCTGCCAAATACTAATGGTGATGCTTCACAACTAATTGGCTCGGTTCAAAGAAAGCCTGGTCGTGGTGATACGACTTTATCAGTTAGTTGCTCTGACAAGATGGCTCGTTGGAATGTGGTTGGAGTTCAAGGATCTCTGCTTTCATTCTTTCTGCAACCTGTTTACCTTTCTTCCATTACTGTTGGACAGTCGCCTCGCGGCTCTGAAATGGTTCTTGTTGTTGATTGCTTGAAACAAGCGCTGCATGATCGCATTCTACCATTGTCAAATGAGCTAATGAGTCCCTTTCAAGTGAACCAGCCACTAATATTGGCAGCTCCAATGCCACCAAGGGAATTTCAGCATTCCGAGACTGCTTTGACCACTTTAACATGCGGGTATTCAATTTGTTGGAATAAGGCTGGTTTGCACGAAGTCATTCTTGGAACCACTGGAAGAAAGCAAGGCACTGCTGCCAAAGGAGCACATTATCCGTCTACTGAGTCATCTTTATGCAAAAAGCGGCTGTTGCAGATTTTCTTGTCCCTAAGACATGAATGCCCTGTCAAAATCCCAGTTAATCAGATTTCGTATCGAGAAATCAAGGAAATGGCGCAGGAATTCAATTTAACCTCAAAAATTCTAAAAAGAAGACCTCCCTTTAGTAATTGGCCTTTGAAACTCCCACATTTTGAGGCATTCTCTGCCATGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004000 GO:0005488 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0008251 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016810 GO:0016814 GO:0019239 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

A_deamin

Protein Analysis

433

Amino Acids

47.16

Weight (kDa)

8.9

Isoelectric Point (pI)

55.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01760 AT1G01760 AT1G01760 AT1G01760
fragaria_vesca	FvH4_7g13861
malus_domestica	MD01G1055100.v1.1 MD07G1140100.v1.1 MD07G1140200.v1.1
prunus_persica	Prupe.2G164500_v2.0.a1 Prupe.2G164800_v2.0.a1 Prupe.2G164800_v2.0.a1 Prupe.2G164800_v2.0.a1 Prupe.2G165000_v2.0.a1
pyrus_communis	pycom01g07990
rosa_chinensis	RchiOBHm_Chr1g0354081
rosa_laevigata	RLG00000028228
rosa_multiflora	Rmu_co8163372.1_g000001 Rmu_sc0004632.1_g000008 Rmu_sc0006777.1_g000001 Rmu_sc0020013.1_g000003
rosa_roxburghii	Rroxscaffold_4G00301240
rosa_rugosa	Rorug01G0241100
rosa_samantha	Rh1AG252000 Rh1BG223800 Rh1BG223900 Rh1CG236400 Rh1DG250800 Rh1DG250900
rosa_wichuraiana	Rw1G021980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1079
AccII	CGCG	3 cut(s)	138, 200, 801
AciI	CCGC	4 cut(s)	156, 801, 978, 1105
AclWI	GGATC	1 cut(s)	742
AcoI	YGGCCR	2 cut(s)	153, 433
AcsI	RAATTY	3 cut(s)	938, 1202, 1221
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	1 cut(s)	479
AfeI	AGCGCT	1 cut(s)	843
AfiI	CCNNNNNNNGG	2 cut(s)	119, 665
AhdI	GACNNNNNGTC	1 cut(s)	219
AjnI	CCWGG	1 cut(s)	658
AjuI	GAANNNNNNNTTGG	2 cut(s)	1008, 1040
AloI	GAACNNNNNNTCC	2 cut(s)	74, 106
AluBI	AGCT	5 cut(s)	243, 287, 577, 877, 920
AluI	AGCT	5 cut(s)	243, 287, 577, 877, 920
Alw21I	GWGCWC	2 cut(s)	245, 1069
Alw26I	GTCTC	3 cut(s)	82, 531, 947
AlwI	GGATC	1 cut(s)	742
Aor51HI	AGCGCT	1 cut(s)	843
AoxI	GGCC	3 cut(s)	153, 433, 1253
ApeKI	GCWGC	3 cut(s)	844, 917, 1055
ApoI	RAATTY	3 cut(s)	938, 1202, 1221
ArsI	GACNNNNNNTTYG	2 cut(s)	132, 164
Asp700I	GAANNNNTTC	2 cut(s)	813, 1020
AspLEI	GCGC	2 cut(s)	844, 1198
AspS9I	GGNCC	2 cut(s)	213, 418
AsuHPI	GGTGA	7 cut(s)	136, 263, 401, 440, 537, 632, 680
AsuII	TTCGAA	1 cut(s)	21
AvaII	GGWCC	2 cut(s)	213, 418
AxyI	CCTNAGG	1 cut(s)	129
BalI	TGGCCA	1 cut(s)	435
BanII	GRGCYC	1 cut(s)	245
BbsI	GAAGAC	1 cut(s)	1240
Bbv12I	GWGCWC	2 cut(s)	245, 1069
BbvI	GCAGC	3 cut(s)	831, 929, 1042
BccI	CCATC	2 cut(s)	425, 697
BceAI	ACGGC	1 cut(s)	13
BciT130I	CCWGG	1 cut(s)	660
BcoDI	GTCTC	3 cut(s)	82, 531, 947
BfaI	CTAG	1 cut(s)	59
BfoI	RGCGCY	1 cut(s)	845
BglII	AGATCT	1 cut(s)	293
BisI	GCNGC	6 cut(s)	156, 802, 845, 918, 1056, 1106
BlsI	GCNGC	6 cut(s)	157, 803, 846, 919, 1057, 1107
Bme1390I	CCNGG	1 cut(s)	660
Bme18I	GGWCC	2 cut(s)	213, 418
BmeRI	GACNNNNNGTC	1 cut(s)	219
BmgT120I	GGNCC	2 cut(s)	213, 418
BmiI	GGNNCC	3 cut(s)	214, 420, 1030
BmrFI	CCNGG	1 cut(s)	660
BmrI	ACTGGG	2 cut(s)	219, 1151
BmsI	GCATC	3 cut(s)	382, 515, 613
BmuI	ACTGGG	2 cut(s)	219, 1151
BpiI	GAAGAC	1 cut(s)	1240
BplI	GAGNNNNNCTC	3 cut(s)	62, 94, 1268
Bpu14I	TTCGAA	1 cut(s)	21
BpuEI	CTTGAG	3 cut(s)	165, 259, 321
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	82
BsaJI	CCNNGG	2 cut(s)	436, 932
Bsc4I	CCNNNNNNNGG	2 cut(s)	119, 665
Bse1I	ACTGG	3 cut(s)	214, 1039, 1157
Bse21I	CCTNAGG	1 cut(s)	129
Bse3DI	GCAATG	1 cut(s)	370
BseBI	CCWGG	1 cut(s)	660
BseDI	CCNNGG	2 cut(s)	436, 932
BseLI	CCNNNNNNNGG	2 cut(s)	119, 665
BseMI	GCAATG	1 cut(s)	370
BseMII	CTCAG	4 cut(s)	143, 293, 443, 1074
BseNI	ACTGG	3 cut(s)	214, 1039, 1157
BseXI	GCAGC	3 cut(s)	831, 929, 1042
Bsh1236I	CGCG	3 cut(s)	138, 200, 801
BshFI	GGCC	3 cut(s)	155, 435, 1255
BsiHKAI	GWGCWC	2 cut(s)	245, 1069
BslFI	GGGAC	3 cut(s)	226, 870, 1111
BslI	CCNNNNNNNGG	2 cut(s)	119, 665
BsmAI	GTCTC	3 cut(s)	82, 531, 947
BsmFI	GGGAC	3 cut(s)	226, 870, 1111
BsmI	GAATGC	4 cut(s)	855, 946, 1145, 1280
BsnI	GGCC	3 cut(s)	155, 435, 1255
Bso31I	GGTCTC	1 cut(s)	82
Bsp119I	TTCGAA	1 cut(s)	21
Bsp1286I	GDGCHC	2 cut(s)	245, 1069
Bsp1407I	TGTACA	1 cut(s)	477
Bsp143I	GATC	3 cut(s)	293, 734, 850
Bsp68I	TCGCGA	1 cut(s)	138
BspACI	CCGC	4 cut(s)	156, 801, 978, 1105
BspANI	GGCC	3 cut(s)	155, 435, 1255
BspCNI	CTCAG	4 cut(s)	142, 294, 444, 1075
BspFNI	CGCG	3 cut(s)	138, 200, 801
BspLI	GGNNCC	3 cut(s)	214, 420, 1030
BspPI	GGATC	1 cut(s)	742
BspT104I	TTCGAA	1 cut(s)	21
BspTNI	GGTCTC	1 cut(s)	82
BsrDI	GCAATG	1 cut(s)	370
BsrGI	TGTACA	1 cut(s)	477
BsrI	ACTGG	3 cut(s)	214, 1039, 1157
BssECI	CCNNGG	2 cut(s)	436, 932
BssMI	GATC	3 cut(s)	293, 734, 850
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	2 cut(s)	436, 932
Bst2UI	CCWGG	1 cut(s)	660
Bst4CI	ACNGT	5 cut(s)	148, 251, 522, 784, 792
Bst6I	CTCTTC	2 cut(s)	114, 591
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	1286
BstAUI	TGTACA	1 cut(s)	477
BstBI	TTCGAA	1 cut(s)	21
BstC8I	GCNNGC	1 cut(s)	125
BstDEI	CTNAG	5 cut(s)	129, 302, 452, 1083, 1130
BstFNI	CGCG	3 cut(s)	138, 200, 801
BstH2I	RGCGCY	1 cut(s)	845
BstHHI	GCGC	2 cut(s)	844, 1198
BstKTI	GATC	3 cut(s)	296, 737, 853
BstMAI	GTCTC	3 cut(s)	82, 531, 947
BstMBI	GATC	3 cut(s)	293, 734, 850
BstMWI	GCNNNNNNNGC	4 cut(s)	369, 1064, 1111, 1286
BstNI	CCWGG	1 cut(s)	660
BstNSI	RCATGY	1 cut(s)	978
BstSCI	CCNGG	1 cut(s)	658
BstUI	CGCG	3 cut(s)	138, 200, 801
BstV1I	GCAGC	3 cut(s)	831, 929, 1042
BstV2I	GAAGAC	1 cut(s)	1240
BstX2I	RGATCY	2 cut(s)	293, 734
BstYI	RGATCY	2 cut(s)	293, 734
Bsu36I	CCTNAGG	1 cut(s)	129
BsuRI	GGCC	3 cut(s)	155, 435, 1255
BtsI	GCAGTG	1 cut(s)	1050
BtsIMutI	CAGTG	4 cut(s)	332, 518, 1032, 1050
BtuMI	TCGCGA	1 cut(s)	138
Cac8I	GCNNGC	1 cut(s)	125
CfoI	GCGC	2 cut(s)	844, 1198
Cfr13I	GGNCC	2 cut(s)	213, 418
Csp6I	GTAC	1 cut(s)	478
CspCI	CAANNNNNGTGG	2 cut(s)	894, 929
CviAII	CATG	5 cut(s)	495, 848, 975, 1136, 1291
CviQI	GTAC	1 cut(s)	478
DdeI	CTNAG	5 cut(s)	129, 302, 452, 1083, 1130
DpnI	GATC	3 cut(s)	295, 736, 852
DpnII	GATC	3 cut(s)	293, 734, 850
DriI	GACNNNNNGTC	1 cut(s)	219
EaeI	YGGCCR	2 cut(s)	153, 433
Eam1104I	CTCTTC	2 cut(s)	114, 591
Eam1105I	GACNNNNNGTC	1 cut(s)	219
EarI	CTCTTC	2 cut(s)	114, 591
Ecl136II	GAGCTC	1 cut(s)	243
Eco130I	CCWWGG	2 cut(s)	436, 932
Eco24I	GRGCYC	1 cut(s)	245
Eco31I	GGTCTC	1 cut(s)	82
Eco47I	GGWCC	2 cut(s)	213, 418
Eco47III	AGCGCT	1 cut(s)	843
Eco53kI	GAGCTC	1 cut(s)	243
Eco81I	CCTNAGG	1 cut(s)	129
EcoICRI	GAGCTC	1 cut(s)	243
EcoRI	GAATTC	1 cut(s)	1202
EcoRII	CCWGG	1 cut(s)	658
EcoT14I	CCWWGG	2 cut(s)	436, 932
EcoT38I	GRGCYC	1 cut(s)	245
ErhI	CCWWGG	2 cut(s)	436, 932
FaeI	CATG	5 cut(s)	498, 851, 978, 1139, 1294
FalI	AAGNNNNNCTT	2 cut(s)	1008, 1040
FaqI	GGGAC	3 cut(s)	226, 870, 1111
FatI	CATG	5 cut(s)	494, 847, 974, 1135, 1290
FauI	CCCGC	1 cut(s)	971
FblI	GTMKAC	1 cut(s)	1079
Fnu4HI	GCNGC	6 cut(s)	156, 802, 845, 918, 1056, 1106
FriOI	GRGCYC	1 cut(s)	245
Fsp4HI	GCNGC	6 cut(s)	156, 802, 845, 918, 1056, 1106
FspBI	CTAG	1 cut(s)	59
GlaI	GCGC	2 cut(s)	843, 1197
GluI	GCNGC	6 cut(s)	156, 802, 845, 918, 1056, 1106
HaeII	RGCGCY	1 cut(s)	845
HaeIII	GGCC	3 cut(s)	155, 435, 1255
HhaI	GCGC	2 cut(s)	844, 1198
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	5 cut(s)	498, 851, 978, 1139, 1294
Hin6I	GCGC	2 cut(s)	842, 1196
HinP1I	GCGC	2 cut(s)	842, 1196
HinfI	GANTC	4 cut(s)	266, 322, 883, 1085
HphI	GGTGA	7 cut(s)	136, 263, 401, 440, 537, 632, 680
Hpy166II	GTNNAC	5 cut(s)	233, 518, 766, 898, 1080
Hpy188I	TCNGA	6 cut(s)	82, 513, 697, 808, 952, 1167
Hpy188III	TCNNGA	4 cut(s)	137, 182, 238, 1178
Hpy8I	GTNNAC	5 cut(s)	233, 518, 766, 898, 1080
Hpy99I	CGWCG	2 cut(s)	10, 34
HpyAV	CCTTC	4 cut(s)	51, 67, 186, 451
HpyCH4III	ACNGT	5 cut(s)	148, 251, 522, 784, 792
HpyCH4V	TGCA	9 cut(s)	317, 382, 466, 506, 757, 847, 1012, 1098, 1114
HpyF10VI	GCNNNNNNNGC	4 cut(s)	369, 1064, 1111, 1286
HpyF3I	CTNAG	5 cut(s)	129, 302, 452, 1083, 1130
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	5 cut(s)	498, 851, 978, 1139, 1294
HspAI	GCGC	2 cut(s)	842, 1196
Kzo9I	GATC	3 cut(s)	293, 734, 850
LmnI	GCTCC	3 cut(s)	248, 925, 1064
Lsp1109I	GCAGC	3 cut(s)	831, 929, 1042
LweI	GCATC	3 cut(s)	382, 515, 613
MaeI	CTAG	1 cut(s)	59
MaeIII	GTNAC	1 cut(s)	142
MalI	GATC	3 cut(s)	295, 736, 852
MboI	GATC	3 cut(s)	293, 734, 850
MflI	RGATCY	2 cut(s)	293, 734
MhlI	GDGCHC	2 cut(s)	245, 1069
MlsI	TGGCCA	1 cut(s)	435
MluNI	TGGCCA	1 cut(s)	435
MlyI	GAGTC	2 cut(s)	892, 1094
MmeI	TCCRAC	5 cut(s)	270, 692, 703, 766, 974
Mox20I	TGGCCA	1 cut(s)	435
MroXI	GAANNNNTTC	2 cut(s)	813, 1020
MscI	TGGCCA	1 cut(s)	435
MseI	TTAA	4 cut(s)	579, 971, 1161, 1211
MslI	CAYNNNNRTG	2 cut(s)	377, 1093
Msp20I	TGGCCA	1 cut(s)	435
MspR9I	CCNGG	1 cut(s)	660
Mva1269I	GAATGC	4 cut(s)	855, 946, 1145, 1280
MvaI	CCWGG	1 cut(s)	660
MvnI	CGCG	3 cut(s)	138, 200, 801
MwoI	GCNNNNNNNGC	4 cut(s)	369, 1064, 1111, 1286
NdeII	GATC	3 cut(s)	293, 734, 850
NlaIII	CATG	5 cut(s)	498, 851, 978, 1139, 1294
NlaIV	GGNNCC	3 cut(s)	214, 420, 1030
NmeAIII	GCCGAG	1 cut(s)	301
NmuCI	GTSAC	1 cut(s)	142
NruI	TCGCGA	1 cut(s)	138
NspI	RCATGY	1 cut(s)	978
NspV	TTCGAA	1 cut(s)	21
PcsI	WCGNNNNNNNCGW	1 cut(s)	255
PctI	GAATGC	4 cut(s)	855, 946, 1145, 1280
PdmI	GAANNNNTTC	2 cut(s)	813, 1020
PfeI	GAWTC	2 cut(s)	266, 322
PkrI	GCNGC	6 cut(s)	157, 803, 846, 919, 1057, 1107
PleI	GAGTC	2 cut(s)	891, 1093
PpsI	GAGTC	2 cut(s)	891, 1093
Psp124BI	GAGCTC	1 cut(s)	245
Psp6I	CCWGG	1 cut(s)	658
PspGI	CCWGG	1 cut(s)	658
PspN4I	GGNNCC	3 cut(s)	214, 420, 1030
PspPI	GGNCC	2 cut(s)	213, 418
PsuI	RGATCY	2 cut(s)	293, 734
RruI	TCGCGA	1 cut(s)	138
RsaI	GTAC	1 cut(s)	479
RsaNI	GTAC	1 cut(s)	478
RseI	CAYNNNNRTG	2 cut(s)	377, 1093
SacI	GAGCTC	1 cut(s)	245
SaqAI	TTAA	4 cut(s)	579, 971, 1161, 1211
SatI	GCNGC	6 cut(s)	156, 802, 845, 918, 1056, 1106
Sau3AI	GATC	3 cut(s)	293, 734, 850
Sau96I	GGNCC	2 cut(s)	213, 418
SchI	GAGTC	2 cut(s)	892, 1094
ScrFI	CCNGG	1 cut(s)	660
SduI	GDGCHC	2 cut(s)	245, 1069
SfaNI	GCATC	3 cut(s)	382, 515, 613
SfuI	TTCGAA	1 cut(s)	21
SinI	GGWCC	2 cut(s)	213, 418
SmiMI	CAYNNNNRTG	2 cut(s)	377, 1093
SmlI	CTYRAG	3 cut(s)	180, 238, 336
SmoI	CTYRAG	3 cut(s)	180, 238, 336
SsiI	CCGC	4 cut(s)	156, 801, 978, 1105
SspI	AATATT	1 cut(s)	912
SspMI	CTAG	1 cut(s)	59
SstI	GAGCTC	1 cut(s)	245
StyD4I	CCNGG	1 cut(s)	658
StyI	CCWWGG	2 cut(s)	436, 932
TaaI	ACNGT	5 cut(s)	148, 251, 522, 784, 792
TaqI	TCGA	3 cut(s)	21, 289, 1177
TatI	WGTACW	1 cut(s)	477
TauI	GCSGC	3 cut(s)	158, 804, 1108
TfiI	GAWTC	2 cut(s)	266, 322
Tru1I	TTAA	4 cut(s)	579, 971, 1161, 1211
Tru9I	TTAA	4 cut(s)	579, 971, 1161, 1211
TscAI	CASTG	4 cut(s)	332, 525, 1039, 1057
TseFI	GTSAC	1 cut(s)	142
TseI	GCWGC	3 cut(s)	844, 917, 1055
Tsp45I	GTSAC	1 cut(s)	142
TspDTI	ATGAA	4 cut(s)	552, 609, 735, 1152
TspGWI	ACGGA	1 cut(s)	1065
TspRI	CASTG	4 cut(s)	332, 525, 1039, 1057
VpaK11BI	GGWCC	2 cut(s)	213, 418
XapI	RAATTY	3 cut(s)	938, 1202, 1221
XceI	RCATGY	1 cut(s)	978
XmiI	GTMKAC	1 cut(s)	1079
XmnI	GAANNNNTTC	2 cut(s)	813, 1020
XspI	CTAG	1 cut(s)	59

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.