Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0003557

Physical Location & Seq

Genomic Coordinates Reverse (-)

26737803 .. 26738513

Gene Structure 711 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G254600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 711 bp

ATGTGGGCACCATGGCTAAAATCACCAAGCAGGGTGCACACAGCCAGAGCTCCACGATCACAGAGAAGTTTTTCCTGCTCATCCTTCAAAGACATCCAAAACCTTTGCGAACCCCAACCCGAATCCGAAGCTCTCAGCCCGCGGAGCGCCTCCATATTGCACCGGGTCAAGATATCCACGTCAGTCCTTCGCTTGTGGGCCCACCGAAACGCGACCCCACACAGCCCCAAACTACCCGACGGTGACCAGCGCGTCGTAATCTACTACACCAGCCTTCGTGTCGTGCGCAGGACCTTCGAGGACTGCAAGACCGTCCGATCAATCCTCCGCGGGTTCCGCGCCCCGATCGACGAGCGAGATCTGTCGATGGACGTAAAATTTTTAGACGAGCTGCAGGAGATTACGGGGAATAAGACTTTGACTCTGCCAATGGTTTTCATTGGCGGGCTGTTCATTGGTGGGGCCGAAGAGGTGAAGCAGCTCCATGAGAGTGGTGAACTGAAGAGACTGATCCAAGGGCTCCCAGTGGTGGACCCCAGAGCTTGTGATTTTTGTGGAGGGCTCAGATTTGTTCTCTGTCAAAAATGTAATGGAAGCCATAAGGTCTATAGTGACAAGGGCGGGTTTAGGCCTTGTACGGTCTGCAACGTCAACGGTTTGATTATGTGCCCTTCATGTTCCCCGCTGCGACGTCGACACAAGGAAGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glutaredoxin

Protein Analysis

237

Amino Acids

26.62

Weight (kDa)

9.48

Isoelectric Point (pI)

65.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58530
fragaria_vesca	FvH4_3g39350 FvH4_7g24960
malus_domestica	MD01G1157000.v1.1 MD03G1062300.v1.1 MD07G1225800.v1.1 MD11G1065900.v1.1
prunus_persica	Prupe.2G254600_v2.0.a1 Prupe.6G052300_v2.0.a1
pyrus_communis	pycom03g04980 pycom06g13500
rosa_chinensis	RchiOBHm_Chr1g0370851 RchiOBHm_Chr1g0370861 RchiOBHm_Chr5g0070781
rosa_laevigata	RLG00000027004 RLG00000036158
rosa_multiflora	Rmu_sc0002944.1_g000025 Rmu_sc0009474.1_g000015 Rmu_sc0009474.1_g000016
rosa_roxburghii	Rroxscaffold_1G00010370 Rroxscaffold_4G00286180 Rroxscaffold_4G00286190
rosa_rugosa	Rorug01G0360000 Rorug05G0408500
rosa_samantha	Rh1AG369600 Rh1BG333100 Rh1CG346600 Rh1DG364300 Rh5AG463900 Rh5BG481700 Rh5CG506200 Rh5DG494600
rosa_wichuraiana	Rw1G032530 Rw1G032540 Rw5G043180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	251
AatII	GACGTC	1 cut(s)	694
Acc16I	TGCGCA	1 cut(s)	287
AccB1I	GGYRCC	1 cut(s)	7
AccI	GTMKAC	1 cut(s)	694
AccII	CGCG	5 cut(s)	142, 212, 252, 330, 339
AciI	CCGC	8 cut(s)	140, 142, 328, 330, 337, 444, 621, 683
AclWI	GGATC	1 cut(s)	505
AcsI	RAATTY	1 cut(s)	377
AcuI	CTGAAG	1 cut(s)	521
AcyI	GRCGYC	1 cut(s)	691
AfaI	GTAC	1 cut(s)	637
AfiI	CCNNNNNNNGG	1 cut(s)	529
AgsI	TTSAA	1 cut(s)	88
AjiI	CACGTC	1 cut(s)	180
AluBI	AGCT	5 cut(s)	50, 131, 391, 481, 542
AluI	AGCT	5 cut(s)	50, 131, 391, 481, 542
Alw21I	GWGCWC	2 cut(s)	39, 52
Alw26I	GTCTC	1 cut(s)	499
Alw44I	GTGCAC	1 cut(s)	35
AlwI	GGATC	1 cut(s)	505
AoxI	GGCC	3 cut(s)	198, 462, 629
ApaI	GGGCCC	1 cut(s)	202
ApaLI	GTGCAC	1 cut(s)	35
ApeKI	GCWGC	3 cut(s)	391, 478, 685
ApoI	RAATTY	1 cut(s)	377
Asp700I	GAANNNNTTC	1 cut(s)	70
AspLEI	GCGC	4 cut(s)	149, 252, 288, 341
AspS9I	GGNCC	5 cut(s)	198, 199, 291, 462, 532
AsuC2I	CCSGG	1 cut(s)	164
AsuHPI	GGTGA	4 cut(s)	15, 254, 484, 506
AvaII	GGWCC	2 cut(s)	291, 532
BaeGI	GKGCMC	4 cut(s)	10, 39, 202, 671
BanI	GGYRCC	1 cut(s)	7
BanII	GRGCYC	4 cut(s)	52, 202, 522, 564
Bbv12I	GWGCWC	2 cut(s)	39, 52
BbvI	GCAGC	3 cut(s)	378, 490, 672
BccI	CCATC	1 cut(s)	361
BcgI	CGANNNNNNTGC	2 cut(s)	277, 311
BcnI	CCSGG	1 cut(s)	164
BcoDI	GTCTC	1 cut(s)	499
BfmI	CTRYAG	2 cut(s)	392, 607
BfoI	RGCGCY	1 cut(s)	150
BglII	AGATCT	1 cut(s)	358
BisI	GCNGC	3 cut(s)	392, 479, 686
BlsI	GCNGC	3 cut(s)	393, 480, 687
Bme1390I	CCNGG	1 cut(s)	164
Bme18I	GGWCC	2 cut(s)	291, 532
BmgBI	CACGTC	1 cut(s)	180
BmgT120I	GGNCC	5 cut(s)	198, 199, 291, 462, 532
BmiI	GGNNCC	6 cut(s)	9, 200, 335, 463, 521, 534
BmrFI	CCNGG	1 cut(s)	164
BmrI	ACTGGG	1 cut(s)	518
BmuI	ACTGGG	1 cut(s)	518
BpuMI	CCSGG	1 cut(s)	164
BsaHI	GRCGYC	1 cut(s)	691
BsaJI	CCNNGG	4 cut(s)	11, 140, 328, 514
Bsc4I	CCNNNNNNNGG	1 cut(s)	529
Bse1I	ACTGG	1 cut(s)	524
BseDI	CCNNGG	4 cut(s)	11, 140, 328, 514
BseGI	GGATG	2 cut(s)	80, 93
BseLI	CCNNNNNNNGG	1 cut(s)	529
BseMII	CTCAG	2 cut(s)	148, 577
BseNI	ACTGG	1 cut(s)	524
BseSI	GKGCMC	4 cut(s)	10, 39, 202, 671
BseXI	GCAGC	3 cut(s)	378, 490, 672
Bsh1236I	CGCG	5 cut(s)	142, 212, 252, 330, 339
Bsh1285I	CGRYCG	1 cut(s)	348
BshFI	GGCC	3 cut(s)	200, 464, 631
BshNI	GGYRCC	1 cut(s)	7
BsiEI	CGRYCG	1 cut(s)	348
BsiHKAI	GWGCWC	2 cut(s)	39, 52
BsiSI	CCGG	1 cut(s)	163
BslI	CCNNNNNNNGG	1 cut(s)	529
BsmAI	GTCTC	1 cut(s)	499
BsnI	GGCC	3 cut(s)	200, 464, 631
Bsp120I	GGGCCC	1 cut(s)	198
Bsp1286I	GDGCHC	7 cut(s)	10, 39, 52, 202, 522, 564, 671
Bsp143I	GATC	5 cut(s)	56, 317, 345, 358, 510
Bsp19I	CCATGG	1 cut(s)	11
BspACI	CCGC	8 cut(s)	140, 142, 328, 330, 337, 444, 621, 683
BspANI	GGCC	3 cut(s)	200, 464, 631
BspCNI	CTCAG	2 cut(s)	147, 576
BspFNI	CGCG	5 cut(s)	142, 212, 252, 330, 339
BspLI	GGNNCC	6 cut(s)	9, 200, 335, 463, 521, 534
BspMAI	CTGCAG	1 cut(s)	396
BspPI	GGATC	1 cut(s)	505
BspT107I	GGYRCC	1 cut(s)	7
BsrI	ACTGG	1 cut(s)	524
BssECI	CCNNGG	4 cut(s)	11, 140, 328, 514
BssMI	GATC	5 cut(s)	56, 317, 345, 358, 510
BssNI	GRCGYC	1 cut(s)	691
BssT1I	CCWWGG	2 cut(s)	11, 514
Bst4CI	ACNGT	4 cut(s)	242, 313, 640, 656
Bst6I	CTCTTC	2 cut(s)	462, 497
BstACI	GRCGYC	1 cut(s)	691
BstC8I	GCNNGC	2 cut(s)	140, 446
BstDEI	CTNAG	2 cut(s)	134, 563
BstDSI	CCRYGG	3 cut(s)	11, 140, 328
BstEII	GGTNACC	1 cut(s)	242
BstF5I	GGATG	2 cut(s)	80, 93
BstFNI	CGCG	5 cut(s)	142, 212, 252, 330, 339
BstH2I	RGCGCY	1 cut(s)	150
BstHHI	GCGC	4 cut(s)	149, 252, 288, 341
BstKTI	GATC	5 cut(s)	59, 320, 348, 361, 513
BstMAI	GTCTC	1 cut(s)	499
BstMBI	GATC	5 cut(s)	56, 317, 345, 358, 510
BstMCI	CGRYCG	1 cut(s)	348
BstMWI	GCNNNNNNNGC	2 cut(s)	144, 336
BstPI	GGTNACC	1 cut(s)	242
BstSCI	CCNGG	1 cut(s)	162
BstSFI	CTRYAG	2 cut(s)	392, 607
BstSLI	GKGCMC	4 cut(s)	10, 39, 202, 671
BstUI	CGCG	5 cut(s)	142, 212, 252, 330, 339
BstV1I	GCAGC	3 cut(s)	378, 490, 672
BstX2I	RGATCY	1 cut(s)	358
BstXI	CCANNNNNNTGG	1 cut(s)	491
BstYI	RGATCY	1 cut(s)	358
BsuRI	GGCC	3 cut(s)	200, 464, 631
BtgI	CCRYGG	3 cut(s)	11, 140, 328
BtrI	CACGTC	1 cut(s)	180
BtsCI	GGATG	2 cut(s)	80, 93
BtsIMutI	CAGTG	1 cut(s)	531
Cac8I	GCNNGC	2 cut(s)	140, 446
CfoI	GCGC	4 cut(s)	149, 252, 288, 341
Cfr13I	GGNCC	5 cut(s)	198, 199, 291, 462, 532
Cfr42I	CCGCGG	2 cut(s)	143, 331
CseI	GACGC	1 cut(s)	241
Csp6I	GTAC	1 cut(s)	636
CviAII	CATG	3 cut(s)	12, 485, 675
CviQI	GTAC	1 cut(s)	636
DdeI	CTNAG	2 cut(s)	134, 563
DpnI	GATC	5 cut(s)	58, 319, 347, 360, 512
DpnII	GATC	5 cut(s)	56, 317, 345, 358, 510
DrdI	GACNNNNNNGTC	1 cut(s)	251
DseDI	GACNNNNNNGTC	1 cut(s)	251
Eam1104I	CTCTTC	2 cut(s)	462, 497
EarI	CTCTTC	2 cut(s)	462, 497
Ecl136II	GAGCTC	1 cut(s)	50
Eco130I	CCWWGG	2 cut(s)	11, 514
Eco147I	AGGCCT	1 cut(s)	631
Eco24I	GRGCYC	4 cut(s)	52, 202, 522, 564
Eco32I	GATATC	1 cut(s)	174
Eco47I	GGWCC	2 cut(s)	291, 532
Eco53kI	GAGCTC	1 cut(s)	50
Eco57I	CTGAAG	1 cut(s)	521
Eco91I	GGTNACC	1 cut(s)	242
EcoICRI	GAGCTC	1 cut(s)	50
EcoO109I	RGGNCCY	1 cut(s)	291
EcoO65I	GGTNACC	1 cut(s)	242
EcoRV	GATATC	1 cut(s)	174
EcoT14I	CCWWGG	2 cut(s)	11, 514
EcoT38I	GRGCYC	4 cut(s)	52, 202, 522, 564
ErhI	CCWWGG	2 cut(s)	11, 514
FaeI	CATG	3 cut(s)	15, 488, 678
FaiI	YATR	8 cut(s)	13, 155, 486, 600, 609, 665, 676, 709
FatI	CATG	3 cut(s)	11, 484, 674
FauI	CCCGC	5 cut(s)	147, 323, 437, 614, 690
FblI	GTMKAC	1 cut(s)	694
Fnu4HI	GCNGC	3 cut(s)	392, 479, 686
FokI	GGATG	2 cut(s)	67, 80
FriOI	GRGCYC	4 cut(s)	52, 202, 522, 564
Fsp4HI	GCNGC	3 cut(s)	392, 479, 686
FspI	TGCGCA	1 cut(s)	287
GlaI	GCGC	4 cut(s)	148, 251, 287, 340
GluI	GCNGC	3 cut(s)	392, 479, 686
HaeII	RGCGCY	1 cut(s)	150
HaeIII	GGCC	3 cut(s)	200, 464, 631
HapII	CCGG	1 cut(s)	163
HgaI	GACGC	1 cut(s)	241
HhaI	GCGC	4 cut(s)	149, 252, 288, 341
Hin1I	GRCGYC	1 cut(s)	691
Hin1II	CATG	3 cut(s)	15, 488, 678
Hin6I	GCGC	4 cut(s)	147, 250, 286, 339
HinP1I	GCGC	4 cut(s)	147, 250, 286, 339
HincII	GTYRAC	2 cut(s)	652, 695
HindII	GTYRAC	2 cut(s)	652, 695
HinfI	GANTC	2 cut(s)	122, 421
HpaII	CCGG	1 cut(s)	163
HphI	GGTGA	4 cut(s)	15, 254, 484, 506
Hpy166II	GTNNAC	5 cut(s)	37, 497, 532, 652, 695
Hpy188I	TCNGA	3 cut(s)	127, 317, 566
Hpy188III	TCNNGA	1 cut(s)	169
Hpy8I	GTNNAC	5 cut(s)	37, 497, 532, 652, 695
Hpy99I	CGWCG	5 cut(s)	242, 257, 353, 693, 696
HpyAV	CCTTC	5 cut(s)	94, 197, 284, 304, 681
HpyCH4III	ACNGT	4 cut(s)	242, 313, 640, 656
HpyCH4IV	ACGT	4 cut(s)	179, 372, 648, 691
HpyCH4V	TGCA	5 cut(s)	37, 160, 306, 394, 645
HpyF10VI	GCNNNNNNNGC	2 cut(s)	144, 336
HpyF3I	CTNAG	2 cut(s)	134, 563
HpySE526I	ACGT	4 cut(s)	179, 372, 648, 691
Hsp92I	GRCGYC	1 cut(s)	691
Hsp92II	CATG	3 cut(s)	15, 488, 678
HspAI	GCGC	4 cut(s)	147, 250, 286, 339
KspI	CCGCGG	2 cut(s)	143, 331
Kzo9I	GATC	5 cut(s)	56, 317, 345, 358, 510
LmnI	GCTCC	4 cut(s)	55, 144, 486, 525
Lsp1109I	GCAGC	3 cut(s)	378, 490, 672
MaeII	ACGT	4 cut(s)	179, 372, 648, 691
MaeIII	GTNAC	2 cut(s)	242, 611
MalI	GATC	5 cut(s)	58, 319, 347, 360, 512
MboI	GATC	5 cut(s)	56, 317, 345, 358, 510
MboII	GAAGA	2 cut(s)	479, 514
MflI	RGATCY	1 cut(s)	358
MhlI	GDGCHC	7 cut(s)	10, 39, 52, 202, 522, 564, 671
MluCI	AATT	1 cut(s)	377
MlyI	GAGTC	1 cut(s)	415
MnlI	CCTC	5 cut(s)	160, 292, 335, 463, 551
MroXI	GAANNNNTTC	1 cut(s)	70
MslI	CAYNNNNRTG	1 cut(s)	489
MspA1I	CMGCKG	3 cut(s)	142, 330, 685
MspI	CCGG	1 cut(s)	163
MspR9I	CCNGG	1 cut(s)	164
MvnI	CGCG	5 cut(s)	142, 212, 252, 330, 339
MwoI	GCNNNNNNNGC	2 cut(s)	144, 336
NciI	CCSGG	1 cut(s)	164
NcoI	CCATGG	1 cut(s)	11
NdeII	GATC	5 cut(s)	56, 317, 345, 358, 510
NlaIII	CATG	3 cut(s)	15, 488, 678
NlaIV	GGNNCC	6 cut(s)	9, 200, 335, 463, 521, 534
NmuCI	GTSAC	2 cut(s)	242, 611
NsbI	TGCGCA	1 cut(s)	287
PceI	AGGCCT	1 cut(s)	631
PdmI	GAANNNNTTC	1 cut(s)	70
PfeI	GAWTC	1 cut(s)	122
PkrI	GCNGC	3 cut(s)	393, 480, 687
Ple19I	CGATCG	1 cut(s)	348
PleI	GAGTC	1 cut(s)	415
PpsI	GAGTC	1 cut(s)	415
PpuMI	RGGWCCY	1 cut(s)	291
Psp124BI	GAGCTC	1 cut(s)	52
Psp5II	RGGWCCY	1 cut(s)	291
PspEI	GGTNACC	1 cut(s)	242
PspN4I	GGNNCC	6 cut(s)	9, 200, 335, 463, 521, 534
PspOMI	GGGCCC	1 cut(s)	198
PspPI	GGNCC	5 cut(s)	198, 199, 291, 462, 532
PspPPI	RGGWCCY	1 cut(s)	291
PstI	CTGCAG	1 cut(s)	396
PsuI	RGATCY	1 cut(s)	358
PvuI	CGATCG	1 cut(s)	348
RsaI	GTAC	1 cut(s)	637
RsaNI	GTAC	1 cut(s)	636
RseI	CAYNNNNRTG	1 cut(s)	489
SacI	GAGCTC	1 cut(s)	52
SacII	CCGCGG	2 cut(s)	143, 331
SalI	GTCGAC	1 cut(s)	693
SatI	GCNGC	3 cut(s)	392, 479, 686
Sau3AI	GATC	5 cut(s)	56, 317, 345, 358, 510
Sau96I	GGNCC	5 cut(s)	198, 199, 291, 462, 532
SchI	GAGTC	1 cut(s)	415
ScrFI	CCNGG	1 cut(s)	164
SduI	GDGCHC	7 cut(s)	10, 39, 52, 202, 522, 564, 671
SfcI	CTRYAG	2 cut(s)	392, 607
Sfr303I	CCGCGG	2 cut(s)	143, 331
SgrBI	CCGCGG	2 cut(s)	143, 331
SinI	GGWCC	2 cut(s)	291, 532
SmiMI	CAYNNNNRTG	1 cut(s)	489
Sse9I	AATT	1 cut(s)	377
SseBI	AGGCCT	1 cut(s)	631
SsiI	CCGC	8 cut(s)	140, 142, 328, 330, 337, 444, 621, 683
SstI	GAGCTC	1 cut(s)	52
StuI	AGGCCT	1 cut(s)	631
StyD4I	CCNGG	1 cut(s)	162
StyI	CCWWGG	2 cut(s)	11, 514
TaaI	ACNGT	4 cut(s)	242, 313, 640, 656
TaiI	ACGT	4 cut(s)	182, 375, 651, 694
TaqI	TCGA	4 cut(s)	297, 348, 365, 694
TasI	AATT	1 cut(s)	377
TfiI	GAWTC	1 cut(s)	122
TscAI	CASTG	1 cut(s)	531
TseFI	GTSAC	2 cut(s)	242, 611
TseI	GCWGC	3 cut(s)	391, 478, 685
Tsp45I	GTSAC	2 cut(s)	242, 611
TspDTI	ATGAA	3 cut(s)	427, 442, 663
TspRI	CASTG	1 cut(s)	531
VneI	GTGCAC	1 cut(s)	35
VpaK11BI	GGWCC	2 cut(s)	291, 532
XapI	RAATTY	1 cut(s)	377
XmiI	GTMKAC	1 cut(s)	694
XmnI	GAANNNNTTC	1 cut(s)	70
ZraI	GACGTC	1 cut(s)	692

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.