Rh5CG506200

Glutaredoxin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0003557
Physical Location & Seq
Reverse (-)
70337101 .. 70352024
14924 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG506200.1

Sequence Viewer

Length: 717 bp
ATGGACCACGCCTTCATTACCGAGCTGCAGCAGATTCTTGGTCAAAGAAAGTTGACCCTCCCCCGGGTTTTCATTGGCGGGAGGTACATTGGTGGGGCCGAGGAGGTGAAACAGCTGCACGAGGCTGGCGAGCTCAAGAAGTTTGTGGAAGGCCTGCCCGTACAGGAACCCGGCGCGTGCGACGCGTGCGGCGGATACAGGTTTTTACTGTGTGACGTTTGTGACGGCAGTCATAAGTTGTATTCTGAGAAAGGGGGCTTCAGGAGTTGCACCTCGTGCAATGAGAATGGTCTGATCAGGTGCAGTGGGCACGATGGGTGTGCGAGATCGGGGAGTGTTGATCGAGTACACACACCGATGAAGGTTGTGATAGAGGGAAACTTGGTAGCAGGGGATGGTTTTAGGTCGGCGCTGGCGCTCCGGTCTCTGTCTCCGCTGTTTGCAATGTTTTCGAGTTTGGTTGCATGTAAGAGATTGGACTGGTTTGCAATCTGGATGCAAGTAAAAGGTGTGCAGGTCTATGGGTTCTCTGATGCCTATCTTGTTGGTCCTTTTCTTGCTATGGTGATCATAATTTGTTTCCAATGTCCAATGATAGATTATTTGGTTACAACTCTTCTACGAAGCAGCTCCGAGAATGCTCAACTTAGGCTGCTAGATGATCCAGAGGTACTAAAGCTTGGACTACATTTGATAGCAAAGAGCCAAAGACAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

238

Amino Acids

26.18

Weight (kDa)

7.52

Isoelectric Point (pI)

49.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRXCR1-2_C PF23733 60 - 102 7.6e-19 GRXCR1/2, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 505
AccII CGCG 2 cut(s) 176, 185
AciI CCGC 4 cut(s) 78, 189, 192, 434
AclWI GGATC 1 cut(s) 656
AcuI CTGAAG 1 cut(s) 244
AdeI CACNNNGTG 1 cut(s) 276
AfaI GTAC 4 cut(s) 86, 162, 348, 672
AfiI CCNNNNNNNGG 2 cut(s) 63, 64
AflIII ACRYGT 1 cut(s) 183
AluBI AGCT 5 cut(s) 25, 115, 133, 630, 679
AluI AGCT 5 cut(s) 25, 115, 133, 630, 679
Alw21I GWGCWC 1 cut(s) 135
Alw26I GTCTC 2 cut(s) 429, 435
AlwI GGATC 1 cut(s) 656
Ama87I CYCGRG 1 cut(s) 63
AoxI GGCC 2 cut(s) 96, 151
ApeKI GCWGC 5 cut(s) 25, 28, 115, 627, 652
AspLEI GCGC 3 cut(s) 176, 412, 418
AspS9I GGNCC 3 cut(s) 4, 96, 548
AsuC2I CCSGG 3 cut(s) 64, 65, 171
AsuHPI GGTGA 2 cut(s) 118, 577
AvaI CYCGRG 1 cut(s) 63
AvaII GGWCC 2 cut(s) 4, 548
BaeGI GKGCMC 1 cut(s) 312
BaeI ACNNNNGTAYC 2 cut(s) 76, 109
BanII GRGCYC 1 cut(s) 135
BauI CACGAG 2 cut(s) 119, 274
Bbv12I GWGCWC 1 cut(s) 135
BbvI GCAGC 5 cut(s) 12, 40, 102, 639, 639
BccI CCATC 2 cut(s) 308, 389
BceAI ACGGC 1 cut(s) 241
BcgI CGANNNNNNTGC 4 cut(s) 302, 336, 432, 466
BciVI GTATCC 1 cut(s) 188
BclI TGATCA 2 cut(s) 294, 567
BcnI CCSGG 3 cut(s) 64, 65, 171
BcoDI GTCTC 2 cut(s) 429, 435
BfaI CTAG 1 cut(s) 656
BfmI CTRYAG 1 cut(s) 26
BfoI RGCGCY 2 cut(s) 413, 419
BfuAI ACCTGC 1 cut(s) 505
BfuI GTATCC 1 cut(s) 188
BisI GCNGC 6 cut(s) 26, 29, 116, 190, 628, 653
BlsI GCNGC 6 cut(s) 27, 30, 117, 191, 629, 654
Bme1390I CCNGG 3 cut(s) 64, 65, 171
Bme18I GGWCC 2 cut(s) 4, 548
BmeT110I CYCGRG 1 cut(s) 63
BmgT120I GGNCC 3 cut(s) 4, 96, 548
BmiI GGNNCC 2 cut(s) 97, 168
BmrFI CCNGG 3 cut(s) 64, 65, 171
BmsI GCATC 2 cut(s) 486, 523
BoxI GACNNNNGTC 1 cut(s) 228
BpuEI CTTGAG 1 cut(s) 119
BpuMI CCSGG 3 cut(s) 64, 65, 171
BsaBI GATNNNNATC 1 cut(s) 537
BsaI GGTCTC 1 cut(s) 429
BsaJI CCNNGG 3 cut(s) 62, 63, 99
BsaWI WCCGGW 1 cut(s) 420
Bsc4I CCNNNNNNNGG 2 cut(s) 63, 64
Bse1I ACTGG 1 cut(s) 485
Bse3DI GCAATG 2 cut(s) 286, 450
Bse8I GATNNNNATC 1 cut(s) 537
BseDI CCNNGG 3 cut(s) 62, 63, 99
BseGI GGATG 2 cut(s) 400, 501
BseJI GATNNNNATC 1 cut(s) 537
BseLI CCNNNNNNNGG 2 cut(s) 63, 64
BseMI GCAATG 2 cut(s) 286, 450
BseMII CTCAG 1 cut(s) 237
BseNI ACTGG 1 cut(s) 485
BseRI GAGGAG 1 cut(s) 116
BseSI GKGCMC 1 cut(s) 312
BseXI GCAGC 5 cut(s) 12, 40, 102, 639, 639
BsgI GTGCAG 3 cut(s) 101, 322, 533
Bsh1236I CGCG 2 cut(s) 176, 185
BshFI GGCC 2 cut(s) 98, 153
BsiHKAI GWGCWC 1 cut(s) 135
BsiHKCI CYCGRG 1 cut(s) 63
BsiSI CCGG 3 cut(s) 64, 171, 421
BslI CCNNNNNNNGG 2 cut(s) 63, 64
BsmAI GTCTC 2 cut(s) 429, 435
BsmI GAATGC 1 cut(s) 643
BsnI GGCC 2 cut(s) 98, 153
Bso31I GGTCTC 1 cut(s) 429
BsoBI CYCGRG 1 cut(s) 63
Bsp1286I GDGCHC 2 cut(s) 135, 312
Bsp143I GATC 5 cut(s) 294, 326, 340, 567, 661
BspACI CCGC 4 cut(s) 78, 189, 192, 434
BspANI GGCC 2 cut(s) 98, 153
BspCNI CTCAG 1 cut(s) 238
BspFNI CGCG 2 cut(s) 176, 185
BspLI GGNNCC 2 cut(s) 97, 168
BspMAI CTGCAG 1 cut(s) 30
BspMI ACCTGC 1 cut(s) 505
BspPI GGATC 1 cut(s) 656
BspTNI GGTCTC 1 cut(s) 429
BsrDI GCAATG 2 cut(s) 286, 450
BsrI ACTGG 1 cut(s) 485
BssECI CCNNGG 3 cut(s) 62, 63, 99
BssMI GATC 5 cut(s) 294, 326, 340, 567, 661
BssSI CACGAG 2 cut(s) 119, 274
Bst2BI CACGAG 2 cut(s) 119, 274
Bst4CI ACNGT 2 cut(s) 210, 714
Bst6I CTCTTC 1 cut(s) 621
BstAPI GCANNNNNTGC 1 cut(s) 276
BstC8I GCNNGC 6 cut(s) 127, 131, 155, 178, 187, 414
BstDEI CTNAG 2 cut(s) 246, 647
BstF5I GGATG 2 cut(s) 400, 501
BstFNI CGCG 2 cut(s) 176, 185
BstH2I RGCGCY 2 cut(s) 413, 419
BstHHI GCGC 3 cut(s) 176, 412, 418
BstKTI GATC 5 cut(s) 297, 329, 343, 570, 664
BstMAI GTCTC 2 cut(s) 429, 435
BstMBI GATC 5 cut(s) 294, 326, 340, 567, 661
BstMWI GCNNNNNNNGC 3 cut(s) 182, 186, 276
BstNSI RCATGY 1 cut(s) 468
BstPAI GACNNNNGTC 1 cut(s) 228
BstSCI CCNGG 3 cut(s) 62, 63, 169
BstSFI CTRYAG 1 cut(s) 26
BstSLI GKGCMC 1 cut(s) 312
BstUI CGCG 2 cut(s) 176, 185
BstV1I GCAGC 5 cut(s) 12, 40, 102, 639, 639
BsuI GTATCC 1 cut(s) 188
BsuRI GGCC 2 cut(s) 98, 153
BtsCI GGATG 2 cut(s) 400, 501
BtsI GCAGTG 1 cut(s) 310
BtsIMutI CAGTG 1 cut(s) 310
BveI ACCTGC 1 cut(s) 505
Cac8I GCNNGC 6 cut(s) 127, 131, 155, 178, 187, 414
CfoI GCGC 3 cut(s) 176, 412, 418
Cfr13I GGNCC 3 cut(s) 4, 96, 548
Cfr9I CCCGGG 1 cut(s) 63
CseI GACGC 1 cut(s) 191
Csp6I GTAC 4 cut(s) 85, 161, 347, 671
CviAII CATG 1 cut(s) 465
CviQI GTAC 4 cut(s) 85, 161, 347, 671
DdeI CTNAG 2 cut(s) 246, 647
DpnI GATC 5 cut(s) 296, 328, 342, 569, 663
DpnII GATC 5 cut(s) 294, 326, 340, 567, 661
DraIII CACNNNGTG 1 cut(s) 276
Eam1104I CTCTTC 1 cut(s) 621
EarI CTCTTC 1 cut(s) 621
EciI GGCGGA 1 cut(s) 207
Ecl136II GAGCTC 1 cut(s) 133
Eco147I AGGCCT 1 cut(s) 153
Eco24I GRGCYC 1 cut(s) 135
Eco31I GGTCTC 1 cut(s) 429
Eco47I GGWCC 2 cut(s) 4, 548
Eco53kI GAGCTC 1 cut(s) 133
Eco57I CTGAAG 1 cut(s) 244
Eco88I CYCGRG 1 cut(s) 63
EcoICRI GAGCTC 1 cut(s) 133
EcoT38I GRGCYC 1 cut(s) 135
FaeI CATG 1 cut(s) 468
FaiI YATR 5 cut(s) 234, 466, 522, 563, 572
FatI CATG 1 cut(s) 464
FauI CCCGC 1 cut(s) 71
FbaI TGATCA 2 cut(s) 294, 567
Fnu4HI GCNGC 6 cut(s) 26, 29, 116, 190, 628, 653
FokI GGATG 2 cut(s) 407, 508
FriOI GRGCYC 1 cut(s) 135
Fsp4HI GCNGC 6 cut(s) 26, 29, 116, 190, 628, 653
FspBI CTAG 1 cut(s) 656
GlaI GCGC 3 cut(s) 175, 411, 417
GluI GCNGC 6 cut(s) 26, 29, 116, 190, 628, 653
HaeII RGCGCY 2 cut(s) 413, 419
HaeIII GGCC 2 cut(s) 98, 153
HapII CCGG 3 cut(s) 64, 171, 421
HgaI GACGC 1 cut(s) 191
HhaI GCGC 3 cut(s) 176, 412, 418
Hin1II CATG 1 cut(s) 468
Hin6I GCGC 3 cut(s) 174, 410, 416
HinP1I GCGC 3 cut(s) 174, 410, 416
HincII GTYRAC 1 cut(s) 54
HindII GTYRAC 1 cut(s) 54
HindIII AAGCTT 1 cut(s) 677
HinfI GANTC 1 cut(s) 34
HpaII CCGG 3 cut(s) 64, 171, 421
HphI GGTGA 2 cut(s) 118, 577
Hpy166II GTNNAC 2 cut(s) 54, 349
Hpy188I TCNGA 4 cut(s) 247, 294, 532, 634
Hpy188III TCNNGA 4 cut(s) 136, 262, 493, 665
Hpy8I GTNNAC 2 cut(s) 54, 349
Hpy99I CGWCG 1 cut(s) 185
HpyAV CCTTC 3 cut(s) 22, 143, 355
HpyCH4III ACNGT 2 cut(s) 210, 714
HpyCH4IV ACGT 1 cut(s) 216
HpyF10VI GCNNNNNNNGC 3 cut(s) 182, 186, 276
HpyF3I CTNAG 2 cut(s) 246, 647
HpySE526I ACGT 1 cut(s) 216
Hsp92II CATG 1 cut(s) 468
HspAI GCGC 3 cut(s) 174, 410, 416
Ksp22I TGATCA 2 cut(s) 294, 567
Kzo9I GATC 5 cut(s) 294, 326, 340, 567, 661
LmnI GCTCC 2 cut(s) 423, 635
Lsp1109I GCAGC 5 cut(s) 12, 40, 102, 639, 639
LweI GCATC 2 cut(s) 486, 523
MaeI CTAG 1 cut(s) 656
MaeII ACGT 1 cut(s) 216
MaeIII GTNAC 3 cut(s) 212, 221, 607
MalI GATC 5 cut(s) 296, 328, 342, 569, 663
MboI GATC 5 cut(s) 294, 326, 340, 567, 661
MboII GAAGA 1 cut(s) 608
MhlI GDGCHC 2 cut(s) 135, 312
MluCI AATT 1 cut(s) 573
MluI ACGCGT 1 cut(s) 183
MnlI CCTC 8 cut(s) 68, 75, 94, 97, 115, 283, 367, 661
MslI CAYNNNNRTG 1 cut(s) 356
MspA1I CMGCKG 2 cut(s) 115, 436
MspI CCGG 3 cut(s) 64, 171, 421
MspR9I CCNGG 3 cut(s) 64, 65, 171
Mva1269I GAATGC 1 cut(s) 643
MvnI CGCG 2 cut(s) 176, 185
MwoI GCNNNNNNNGC 3 cut(s) 182, 186, 276
NciI CCSGG 3 cut(s) 64, 65, 171
NdeII GATC 5 cut(s) 294, 326, 340, 567, 661
NlaIII CATG 1 cut(s) 468
NlaIV GGNNCC 2 cut(s) 97, 168
NmeAIII GCCGAG 1 cut(s) 124
NmuCI GTSAC 2 cut(s) 212, 221
NspI RCATGY 1 cut(s) 468
PceI AGGCCT 1 cut(s) 153
PcsI WCGNNNNNNNCGW 1 cut(s) 126
PctI GAATGC 1 cut(s) 643
PfeI GAWTC 1 cut(s) 34
PkrI GCNGC 6 cut(s) 27, 30, 117, 191, 629, 654
PshAI GACNNNNGTC 1 cut(s) 228
Psp124BI GAGCTC 1 cut(s) 135
PspN4I GGNNCC 2 cut(s) 97, 168
PspPI GGNCC 3 cut(s) 4, 96, 548
PstI CTGCAG 1 cut(s) 30
PvuII CAGCTG 1 cut(s) 115
RsaI GTAC 4 cut(s) 86, 162, 348, 672
RsaNI GTAC 4 cut(s) 85, 161, 347, 671
RseI CAYNNNNRTG 1 cut(s) 356
SacI GAGCTC 1 cut(s) 135
SatI GCNGC 6 cut(s) 26, 29, 116, 190, 628, 653
Sau3AI GATC 5 cut(s) 294, 326, 340, 567, 661
Sau96I GGNCC 3 cut(s) 4, 96, 548
ScrFI CCNGG 3 cut(s) 64, 65, 171
SduI GDGCHC 2 cut(s) 135, 312
SfaNI GCATC 2 cut(s) 486, 523
SfcI CTRYAG 1 cut(s) 26
SinI GGWCC 2 cut(s) 4, 548
SmaI CCCGGG 1 cut(s) 65
SmiMI CAYNNNNRTG 1 cut(s) 356
SmlI CTYRAG 1 cut(s) 134
SmoI CTYRAG 1 cut(s) 134
Sse9I AATT 1 cut(s) 573
SseBI AGGCCT 1 cut(s) 153
SsiI CCGC 4 cut(s) 78, 189, 192, 434
SspMI CTAG 1 cut(s) 656
SstI GAGCTC 1 cut(s) 135
StuI AGGCCT 1 cut(s) 153
StyD4I CCNGG 3 cut(s) 62, 63, 169
TaaI ACNGT 2 cut(s) 210, 714
TaiI ACGT 1 cut(s) 219
TaqI TCGA 2 cut(s) 343, 452
TasI AATT 1 cut(s) 573
TatI WGTACW 1 cut(s) 346
TauI GCSGC 1 cut(s) 192
TfiI GAWTC 1 cut(s) 34
TscAI CASTG 1 cut(s) 310
TseFI GTSAC 2 cut(s) 212, 221
TseI GCWGC 5 cut(s) 25, 28, 115, 627, 652
Tsp45I GTSAC 2 cut(s) 212, 221
TspDTI ATGAA 3 cut(s) 4, 61, 374
TspMI CCCGGG 1 cut(s) 63
TspRI CASTG 1 cut(s) 310
VpaK11BI GGWCC 2 cut(s) 4, 548
XceI RCATGY 1 cut(s) 468
XmaI CCCGGG 1 cut(s) 63
XspI CTAG 1 cut(s) 656
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.