pycom06g13500

Glutaredoxin

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
18488783 .. 18489045
263 bp
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UTR
Exon/CDS
Intron
pycom06g13500.2

Sequence Viewer

Length: 219 bp
ATGTGGCGGCCGTGGAGCAAATCAATGGTTCAAATGTACGACATCCAAACACTCTGCGCCGACGAAACCGACGACCACTCCCAGCATCCGACAACCGGAGCCGCCACCAAAAAAGCCTCCGCTATTTTCCATCGCGTCCGACTTGCCAACTCGCTCCTCCACGCCTGGTCAGCCACCCAGCCCTTCACATCCTCACACCTCAAACCTCAACTCGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

73

Amino Acids

8.16

Weight (kDa)

9.04

Isoelectric Point (pI)

24.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 135
AciI CCGC 3 cut(s) 7, 102, 120
AcoI YGGCCR 1 cut(s) 8
AfaI GTAC 1 cut(s) 38
AfiI CCNNNNNNNGG 1 cut(s) 95
AgsI TTSAA 1 cut(s) 32
AjnI CCWGG 1 cut(s) 164
AoxI GGCC 1 cut(s) 8
AspLEI GCGC 1 cut(s) 59
BccI CCATC 1 cut(s) 138
BciT130I CCWGG 1 cut(s) 166
BisI GCNGC 2 cut(s) 8, 102
BlsI GCNGC 2 cut(s) 9, 103
Bme1390I CCNGG 1 cut(s) 166
BmiI GGNNCC 1 cut(s) 100
BmrFI CCNGG 1 cut(s) 166
BmsI GCATC 1 cut(s) 94
BsaJI CCNNGG 1 cut(s) 11
BsaWI WCCGGW 1 cut(s) 95
BsaXI ACNNNNNCTCC 2 cut(s) 62, 92
Bsc4I CCNNNNNNNGG 1 cut(s) 95
BseBI CCWGG 1 cut(s) 166
BseDI CCNNGG 1 cut(s) 11
BseGI GGATG 3 cut(s) 42, 85, 188
BseLI CCNNNNNNNGG 1 cut(s) 95
BseRI GAGGAG 1 cut(s) 146
BseX3I CGGCCG 1 cut(s) 8
BseYI CCCAGC 2 cut(s) 81, 177
Bsh1236I CGCG 1 cut(s) 135
Bsh1285I CGRYCG 1 cut(s) 11
BshFI GGCC 1 cut(s) 10
BsiEI CGRYCG 1 cut(s) 11
BsiSI CCGG 1 cut(s) 96
BslI CCNNNNNNNGG 1 cut(s) 95
BsnI GGCC 1 cut(s) 10
BspACI CCGC 3 cut(s) 7, 102, 120
BspANI GGCC 1 cut(s) 10
BspFNI CGCG 1 cut(s) 135
BspLI GGNNCC 1 cut(s) 100
BssECI CCNNGG 1 cut(s) 11
Bst2UI CCWGG 1 cut(s) 166
BstDSI CCRYGG 1 cut(s) 11
BstF5I GGATG 3 cut(s) 42, 85, 188
BstFNI CGCG 1 cut(s) 135
BstHHI GCGC 1 cut(s) 59
BstMCI CGRYCG 1 cut(s) 11
BstMWI GCNNNNNNNGC 1 cut(s) 170
BstNI CCWGG 1 cut(s) 166
BstSCI CCNGG 1 cut(s) 164
BstUI CGCG 1 cut(s) 135
BstZI CGGCCG 1 cut(s) 8
BsuRI GGCC 1 cut(s) 10
BtgI CCRYGG 1 cut(s) 11
BtgZI GCGATG 1 cut(s) 116
BtsCI GGATG 3 cut(s) 42, 85, 188
CfoI GCGC 1 cut(s) 59
CseI GACGC 1 cut(s) 124
Csp6I GTAC 1 cut(s) 37
CviJI RGCY 5 cut(s) 10, 101, 116, 173, 181
CviKI_1 RGCY 5 cut(s) 10, 101, 116, 173, 181
CviQI GTAC 1 cut(s) 37
EaeI YGGCCR 1 cut(s) 8
EagI CGGCCG 1 cut(s) 8
EclXI CGGCCG 1 cut(s) 8
Eco52I CGGCCG 1 cut(s) 8
EcoRII CCWGG 1 cut(s) 164
Fnu4HI GCNGC 2 cut(s) 8, 102
FokI GGATG 3 cut(s) 29, 72, 175
Fsp4HI GCNGC 2 cut(s) 8, 102
GlaI GCGC 1 cut(s) 58
GluI GCNGC 2 cut(s) 8, 102
GsaI CCCAGC 2 cut(s) 85, 181
HaeIII GGCC 1 cut(s) 10
HapII CCGG 1 cut(s) 96
HgaI GACGC 1 cut(s) 124
HhaI GCGC 1 cut(s) 59
Hin6I GCGC 1 cut(s) 57
HinP1I GCGC 1 cut(s) 57
HpaII CCGG 1 cut(s) 96
Hpy188I TCNGA 2 cut(s) 90, 140
Hpy99I CGWCG 2 cut(s) 65, 74
HpyAV CCTTC 1 cut(s) 193
HpyF10VI GCNNNNNNNGC 1 cut(s) 170
HspAI GCGC 1 cut(s) 57
LmnI GCTCC 3 cut(s) 15, 98, 159
LpnPI CCDG 5 cut(s) 95, 109, 151, 178, 191
LweI GCATC 1 cut(s) 94
MmeI TCCRAC 2 cut(s) 113, 163
MnlI CCTC 5 cut(s) 127, 167, 202, 209, 216
MspI CCGG 1 cut(s) 96
MspR9I CCNGG 1 cut(s) 166
MvaI CCWGG 1 cut(s) 166
MvnI CGCG 1 cut(s) 135
MwoI GCNNNNNNNGC 1 cut(s) 170
NlaIV GGNNCC 1 cut(s) 100
PcsI WCGNNNNNNNCGW 1 cut(s) 69
PkrI GCNGC 2 cut(s) 9, 103
Psp6I CCWGG 1 cut(s) 164
PspFI CCCAGC 2 cut(s) 81, 177
PspGI CCWGG 1 cut(s) 164
PspN4I GGNNCC 1 cut(s) 100
RsaI GTAC 1 cut(s) 38
RsaNI GTAC 1 cut(s) 37
SatI GCNGC 2 cut(s) 8, 102
ScrFI CCNGG 1 cut(s) 166
SetI ASST 2 cut(s) 201, 208
SfaNI GCATC 1 cut(s) 94
SsiI CCGC 3 cut(s) 7, 102, 120
StyD4I CCNGG 1 cut(s) 164
TauI GCSGC 2 cut(s) 10, 104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.