Prupe.2G304200_v2.0.a1

S-type anion channel

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
29054565 .. 29057126
2562 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G304200.1

Sequence Viewer

Length: 1788 bp
ATGATGGAAAACAGCAAAAATCTGGATTATGTAAACCTGAATTCCCCTGAACTTCCATCTCTCATCAGATATATATCATCAAATGAAGTGGCTGGCTTTGATAATGTTGAGGAAAATAGATTTCTCAATGGCAGCTGTCAACCAAGTCACCTTCAACCTATCAGTCCATCAGCTAAAGGAATTGAGGCGGCAGCGTTTGATGCATCTGAACCCCCGATTCATCAAAGGGTCCATTCTGTTTCTATTAGCATGCCATCATCACCAACCGGAACTCATTTACACAACAGCAAAAATATGATCTTCAGTGAAATTCCAATATCTTCTGCCGCAACTGAAACTGCTGGCAGCACACTGCCCAAAGCCGTAAAATTTCACTCTCAACCAATGCCAAAAAGCTCTGCACTTGAGGAGGCAATTAGCACTGGACATTTTTCTTATCAACCAAGTATCGAAAGGTTGAAAGACAAGAGGTTTGATACTTTCAAAACATGGTCTGGGAAACTGGAAAGGCAGATAACACTACTCCGTGGAAAGACACCAAGGGAGACTGAACCAGAGAATGCTAATCTGCAAAATGCAGAAGTTGAACGTTTGCCTGCAGACCGATACTTTGATGCATTGGAAGGGCCAGAGTTAGAAACCCTTAGGGATTCAGAGGAAATACTCCTTCCAGAAGACAAACAATGGCCATTTCTGCTCCGGTATCCTGTTTCTTCATTTAGCATCTGCCTCGGTGTTAGCAGCCAAGCTATTTTGTGGAAGACCCTTCCTACCTCTGCCTCCACGAAATTCCTCCACTTAAGCTTAATACCAAATCTAGTTCTGTGGTGCATTTCAGTTGCTCTTGTAGCTATTGTTGCTTGTATCTACCTTCTAAAAGTGATCCTTTACTTTGAAGCAGTTCGTCGTGAGTACTACCACCCTGTTCGTGTCAACTTCTTCTTTTCCCCATGGATCGCCCTCTTGTTCTTAGCTCTTGGAGTGCCACCTTCATTTGCTAACAACCTGCATCCAGCTCTTTGGTACATCCTCATGACCCCAATCTTATGCCTTGAGCTTAAAATCTATGGACAGTGGATGTCAGGAGGCCAACGTAGGCTTTCAAAGGTAGCCAATCCTGTTAACCATCTCGCAATTGTTGGGAATTTTGTGGGGGCATTGTTAGGTGCGTCAATGGGACTAAAAGAAGGACCAATATTCTTCTTTGCTGTGGGGTTGGCTCACTACATGGTATTATTTGTAACTCTCTACCAGAGGCTTCCAACAAACGAGACTGTAATCCCAAAGGACCTCCATCCTGTATTCTTTCTGTTTGTTGCAGCACCAAGTGTAGCTTCCATGGCATGGGGAAGAATCCAAGGCTCTTTCAATTACGGTTCACGAATTTTTTACTTCATTTCCTTGTTCCTTTATCTCTCACTGGTAGTTCGGGTTAACTTTTTCAGAGGATTTAAGTTTTCTTTGACATGGTGGGCGTATACATTCCCAATGACTGGTGCTGCCATTGCAACCATCAGGTACTCAAATGAGGTCACAAATGCGGTAACACAAACTCTGGCTGTCATACTCTCTCTCACCGCCACGATCATAGTCACCATTCTTCTCATAACAACCATCTTGCATTGTTTTGTGATCCAAGACCTCTTCCCCAATGACATTGCAATTGCCATCAGTGACAGAAAGTTAAAACCAAACAGGACATGGTTCCAACTTAGACATGGAAGCTCGGACTCAAAGGACATCAAAAAACTTTTGAAGTCAGCAACAAGTTCAGAAACAAGGATTTAG

Protein Analysis

596

Amino Acids

66.74

Weight (kDa)

8.91

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1014
AccB7I CCANNNNNTGG 2 cut(s) 1344, 1493
AccI GTMKAC 1 cut(s) 1478
AciI CCGC 4 cut(s) 188, 327, 1541, 1578
AclI AACGTT 1 cut(s) 589
AclWI GGATC 3 cut(s) 877, 962, 1627
AcoI YGGCCR 1 cut(s) 686
AcsI RAATTY 6 cut(s) 40, 309, 368, 788, 1144, 1383
AcuI CTGAAG 1 cut(s) 286
AdeI CACNNNGTG 1 cut(s) 1328
AfaI GTAC 3 cut(s) 914, 1025, 1520
AfiI CCNNNNNNNGG 2 cut(s) 1344, 1493
AflII CTTAAG 1 cut(s) 799
AgsI TTSAA 8 cut(s) 155, 460, 484, 587, 896, 1104, 1369, 1756
AjuI GAANNNNNNNTTGG 2 cut(s) 1318, 1350
Alw26I GTCTC 2 cut(s) 539, 1265
AlwI GGATC 3 cut(s) 877, 962, 1627
AoxI GGCC 3 cut(s) 626, 686, 1087
ApeKI GCWGC 6 cut(s) 132, 191, 345, 741, 1319, 1499
ApoI RAATTY 6 cut(s) 40, 309, 368, 788, 1144, 1383
ArsI GACNNNNNNTTYG 4 cut(s) 455, 487, 593, 625
Asp700I GAANNNNTTC 1 cut(s) 900
AspS9I GGNCC 4 cut(s) 229, 626, 1190, 1288
AsuHPI GGTGA 4 cut(s) 140, 252, 1567, 1585
AvaII GGWCC 3 cut(s) 229, 1190, 1288
AxyI CCTNAGG 1 cut(s) 644
BalI TGGCCA 1 cut(s) 688
BbsI GAAGAC 2 cut(s) 681, 767
BbvI GCAGC 6 cut(s) 144, 203, 357, 753, 1331, 1486
BccI CCATC 8 cut(s) 64, 175, 262, 1134, 1302, 1520, 1622, 1676
BceAI ACGGC 1 cut(s) 347
BcgI CGANNNNNNTGC 2 cut(s) 712, 746
BciVI GTATCC 1 cut(s) 714
BcoDI GTCTC 2 cut(s) 539, 1265
BfaI CTAG 1 cut(s) 818
BfmI CTRYAG 1 cut(s) 597
BfrI CTTAAG 1 cut(s) 799
BfuAI ACCTGC 1 cut(s) 1014
BfuI GTATCC 1 cut(s) 714
BisI GCNGC 8 cut(s) 133, 189, 192, 327, 346, 742, 1320, 1500
BlsI GCNGC 8 cut(s) 134, 190, 193, 328, 347, 743, 1321, 1501
BmcAI AGTACT 1 cut(s) 914
Bme18I GGWCC 3 cut(s) 229, 1190, 1288
BmgT120I GGNCC 4 cut(s) 229, 626, 1190, 1288
BmiI GGNNCC 2 cut(s) 230, 1706
BmsI GCATC 5 cut(s) 190, 212, 604, 732, 1018
BpiI GAAGAC 2 cut(s) 681, 767
BpuEI CTTGAG 2 cut(s) 425, 1073
BsaBI GATNNNNATC 1 cut(s) 73
BsaJI CCNNGG 6 cut(s) 526, 539, 730, 950, 1338, 1357
BsaWI WCCGGW 2 cut(s) 266, 699
Bsc4I CCNNNNNNNGG 2 cut(s) 1344, 1493
Bse1I ACTGG 4 cut(s) 427, 507, 1425, 1498
Bse21I CCTNAGG 1 cut(s) 644
Bse3DI GCAATG 2 cut(s) 1503, 1656
Bse8I GATNNNNATC 1 cut(s) 73
BseDI CCNNGG 6 cut(s) 526, 539, 730, 950, 1338, 1357
BseGI GGATG 4 cut(s) 1009, 1026, 1083, 1294
BseJI GATNNNNATC 1 cut(s) 73
BseLI CCNNNNNNNGG 2 cut(s) 1344, 1493
BseMI GCAATG 2 cut(s) 1503, 1656
BseNI ACTGG 4 cut(s) 427, 507, 1425, 1498
BseRI GAGGAG 1 cut(s) 422
BseXI GCAGC 6 cut(s) 144, 203, 357, 753, 1331, 1486
BsgI GTGCAG 1 cut(s) 384
BshFI GGCC 3 cut(s) 628, 688, 1089
BsiSI CCGG 2 cut(s) 267, 700
BslFI GGGAC 1 cut(s) 1191
BslI CCNNNNNNNGG 2 cut(s) 1344, 1493
BsmAI GTCTC 2 cut(s) 539, 1265
BsmFI GGGAC 1 cut(s) 1191
BsmI GAATGC 1 cut(s) 565
BsnI GGCC 3 cut(s) 628, 688, 1089
Bsp143I GATC 5 cut(s) 297, 882, 954, 1584, 1632
Bsp19I CCATGG 2 cut(s) 950, 1338
BspACI CCGC 4 cut(s) 188, 327, 1541, 1578
BspANI GGCC 3 cut(s) 628, 688, 1089
BspHI TCATGA 1 cut(s) 1032
BspLI GGNNCC 2 cut(s) 230, 1706
BspMAI CTGCAG 1 cut(s) 601
BspMI ACCTGC 1 cut(s) 1014
BspPI GGATC 3 cut(s) 877, 962, 1627
BspTI CTTAAG 1 cut(s) 799
BsrDI GCAATG 2 cut(s) 1503, 1656
BsrI ACTGG 4 cut(s) 427, 507, 1425, 1498
BssECI CCNNGG 6 cut(s) 526, 539, 730, 950, 1338, 1357
BssMI GATC 5 cut(s) 297, 882, 954, 1584, 1632
BssNAI GTATAC 1 cut(s) 1479
BssT1I CCWWGG 4 cut(s) 539, 950, 1338, 1357
Bst1107I GTATAC 1 cut(s) 1479
Bst4CI ACNGT 3 cut(s) 1074, 1276, 1376
Bst6I CTCTTC 1 cut(s) 1649
BstAFI CTTAAG 1 cut(s) 799
BstC8I GCNNGC 4 cut(s) 94, 251, 343, 597
BstDEI CTNAG 3 cut(s) 644, 970, 1712
BstDSI CCRYGG 3 cut(s) 526, 950, 1338
BstF5I GGATG 4 cut(s) 1009, 1026, 1083, 1294
BstKTI GATC 5 cut(s) 300, 885, 957, 1587, 1635
BstMAI GTCTC 2 cut(s) 539, 1265
BstMBI GATC 5 cut(s) 297, 882, 954, 1584, 1632
BstMWI GCNNNNNNNGC 6 cut(s) 200, 694, 848, 857, 1340, 1505
BstNSI RCATGY 1 cut(s) 253
BstSFI CTRYAG 1 cut(s) 597
BstV1I GCAGC 6 cut(s) 144, 203, 357, 753, 1331, 1486
BstV2I GAAGAC 2 cut(s) 681, 767
BstXI CCANNNNNNTGG 1 cut(s) 1020
BstZ17I GTATAC 1 cut(s) 1479
Bsu36I CCTNAGG 1 cut(s) 644
BsuI GTATCC 1 cut(s) 714
BsuRI GGCC 3 cut(s) 628, 688, 1089
BtgI CCRYGG 3 cut(s) 526, 950, 1338
BtsCI GGATG 4 cut(s) 1009, 1026, 1083, 1294
BtsI GCAGTG 1 cut(s) 350
BtsIMutI CAGTG 6 cut(s) 310, 350, 420, 1079, 1418, 1678
BveI ACCTGC 1 cut(s) 1014
Cac8I GCNNGC 4 cut(s) 94, 251, 343, 597
CciI TCATGA 1 cut(s) 1032
Cfr13I GGNCC 4 cut(s) 229, 626, 1190, 1288
CseI GACGC 1 cut(s) 1158
Csp6I GTAC 3 cut(s) 913, 1024, 1519
CspCI CAANNNNNGTGG 2 cut(s) 69, 104
CviQI GTAC 3 cut(s) 913, 1024, 1519
DdeI CTNAG 3 cut(s) 644, 970, 1712
DpnI GATC 5 cut(s) 299, 884, 956, 1586, 1634
DpnII GATC 5 cut(s) 297, 882, 954, 1584, 1632
DraIII CACNNNGTG 1 cut(s) 1328
EaeI YGGCCR 1 cut(s) 686
Eam1104I CTCTTC 1 cut(s) 1649
EarI CTCTTC 1 cut(s) 1649
Eco130I CCWWGG 4 cut(s) 539, 950, 1338, 1357
Eco47I GGWCC 3 cut(s) 229, 1190, 1288
Eco57I CTGAAG 1 cut(s) 286
Eco81I CCTNAGG 1 cut(s) 644
EcoO109I RGGNCCY 1 cut(s) 1288
EcoRI GAATTC 1 cut(s) 40
EcoT14I CCWWGG 4 cut(s) 539, 950, 1338, 1357
EcoT22I ATGCAT 2 cut(s) 205, 619
ErhI CCWWGG 4 cut(s) 539, 950, 1338, 1357
FalI AAGNNNNNCTT 4 cut(s) 870, 902, 1318, 1350
FaqI GGGAC 1 cut(s) 1191
FblI GTMKAC 1 cut(s) 1478
Fnu4HI GCNGC 8 cut(s) 133, 189, 192, 327, 346, 742, 1320, 1500
FokI GGATG 4 cut(s) 996, 1013, 1090, 1281
Fsp4HI GCNGC 8 cut(s) 133, 189, 192, 327, 346, 742, 1320, 1500
FspBI CTAG 1 cut(s) 818
GluI GCNGC 8 cut(s) 133, 189, 192, 327, 346, 742, 1320, 1500
HaeIII GGCC 3 cut(s) 628, 688, 1089
HapII CCGG 2 cut(s) 267, 700
HgaI GACGC 1 cut(s) 1158
HincII GTYRAC 4 cut(s) 140, 934, 1123, 1435
HindII GTYRAC 4 cut(s) 140, 934, 1123, 1435
HindIII AAGCTT 1 cut(s) 802
HinfI GANTC 4 cut(s) 217, 650, 1353, 1730
HpaI GTTAAC 2 cut(s) 1123, 1435
HpaII CCGG 2 cut(s) 267, 700
HphI GGTGA 4 cut(s) 140, 252, 1567, 1585
Hpy166II GTNNAC 7 cut(s) 34, 140, 934, 1123, 1379, 1435, 1479
Hpy188I TCNGA 6 cut(s) 68, 208, 655, 1445, 1729, 1774
Hpy188III TCNNGA 6 cut(s) 23, 671, 908, 1033, 1083, 1380
Hpy8I GTNNAC 7 cut(s) 34, 140, 934, 1123, 1379, 1435, 1479
Hpy99I CGWCG 1 cut(s) 909
HpyAV CCTTC 7 cut(s) 161, 617, 677, 776, 881, 999, 1181
HpyCH4III ACNGT 3 cut(s) 1074, 1276, 1376
HpyCH4IV ACGT 2 cut(s) 589, 1093
HpyF10VI GCNNNNNNNGC 6 cut(s) 200, 694, 848, 857, 1340, 1505
HpyF3I CTNAG 3 cut(s) 644, 970, 1712
HpySE526I ACGT 2 cut(s) 589, 1093
KspAI GTTAAC 2 cut(s) 1123, 1435
Kzo9I GATC 5 cut(s) 297, 882, 954, 1584, 1632
LmnI GCTCC 1 cut(s) 702
Lsp1109I GCAGC 6 cut(s) 144, 203, 357, 753, 1331, 1486
LweI GCATC 5 cut(s) 190, 212, 604, 732, 1018
MaeI CTAG 1 cut(s) 818
MaeII ACGT 2 cut(s) 589, 1093
MaeIII GTNAC 6 cut(s) 146, 1240, 1531, 1543, 1591, 1673
MalI GATC 5 cut(s) 299, 884, 956, 1586, 1634
MboI GATC 5 cut(s) 297, 882, 954, 1584, 1632
MfeI CAATTG 2 cut(s) 1134, 1662
MlsI TGGCCA 1 cut(s) 688
MluNI TGGCCA 1 cut(s) 688
MlyI GAGTC 1 cut(s) 1724
MmeI TCCRAC 2 cut(s) 1286, 1732
Mox20I TGGCCA 1 cut(s) 688
Mph1103I ATGCAT 2 cut(s) 205, 619
MroXI GAANNNNTTC 1 cut(s) 900
MscI TGGCCA 1 cut(s) 688
MseI TTAA 7 cut(s) 800, 806, 1059, 1122, 1434, 1452, 1685
MslI CAYNNNNRTG 1 cut(s) 1031
Msp20I TGGCCA 1 cut(s) 688
MspA1I CMGCKG 1 cut(s) 135
MspCI CTTAAG 1 cut(s) 799
MspI CCGG 2 cut(s) 267, 700
MunI CAATTG 2 cut(s) 1134, 1662
Mva1269I GAATGC 1 cut(s) 565
MwoI GCNNNNNNNGC 6 cut(s) 200, 694, 848, 857, 1340, 1505
NcoI CCATGG 2 cut(s) 950, 1338
NdeII GATC 5 cut(s) 297, 882, 954, 1584, 1632
NlaIV GGNNCC 2 cut(s) 230, 1706
NmuCI GTSAC 4 cut(s) 146, 1531, 1591, 1673
NsiI ATGCAT 2 cut(s) 205, 619
NspI RCATGY 1 cut(s) 253
PaeI GCATGC 1 cut(s) 253
PagI TCATGA 1 cut(s) 1032
PctI GAATGC 1 cut(s) 565
PdmI GAANNNNTTC 1 cut(s) 900
PfeI GAWTC 3 cut(s) 217, 650, 1353
PflMI CCANNNNNTGG 2 cut(s) 1344, 1493
PkrI GCNGC 8 cut(s) 134, 190, 193, 328, 347, 743, 1321, 1501
PleI GAGTC 1 cut(s) 1724
PpsI GAGTC 1 cut(s) 1724
PpuMI RGGWCCY 1 cut(s) 1288
Psp1406I AACGTT 1 cut(s) 589
Psp5II RGGWCCY 1 cut(s) 1288
PspN4I GGNNCC 2 cut(s) 230, 1706
PspPI GGNCC 4 cut(s) 229, 626, 1190, 1288
PspPPI RGGWCCY 1 cut(s) 1288
PstI CTGCAG 1 cut(s) 601
PvuII CAGCTG 1 cut(s) 135
RsaI GTAC 3 cut(s) 914, 1025, 1520
RsaNI GTAC 3 cut(s) 913, 1024, 1519
RseI CAYNNNNRTG 1 cut(s) 1031
SaqAI TTAA 7 cut(s) 800, 806, 1059, 1122, 1434, 1452, 1685
SatI GCNGC 8 cut(s) 133, 189, 192, 327, 346, 742, 1320, 1500
Sau3AI GATC 5 cut(s) 297, 882, 954, 1584, 1632
Sau96I GGNCC 4 cut(s) 229, 626, 1190, 1288
ScaI AGTACT 1 cut(s) 914
SchI GAGTC 1 cut(s) 1724
SfaNI GCATC 5 cut(s) 190, 212, 604, 732, 1018
SfcI CTRYAG 1 cut(s) 597
SinI GGWCC 3 cut(s) 229, 1190, 1288
SmiMI CAYNNNNRTG 1 cut(s) 1031
SmlI CTYRAG 3 cut(s) 404, 799, 1052
SmoI CTYRAG 3 cut(s) 404, 799, 1052
SphI GCATGC 1 cut(s) 253
SsiI CCGC 4 cut(s) 188, 327, 1541, 1578
SspI AATATT 1 cut(s) 1197
SspMI CTAG 1 cut(s) 818
StyI CCWWGG 4 cut(s) 539, 950, 1338, 1357
TaaI ACNGT 3 cut(s) 1074, 1276, 1376
TaiI ACGT 2 cut(s) 592, 1096
TaqI TCGA 1 cut(s) 450
TaqII GACCGA 1 cut(s) 618
TatI WGTACW 1 cut(s) 912
TauI GCSGC 2 cut(s) 191, 329
TfiI GAWTC 3 cut(s) 217, 650, 1353
Tru1I TTAA 7 cut(s) 800, 806, 1059, 1122, 1434, 1452, 1685
Tru9I TTAA 7 cut(s) 800, 806, 1059, 1122, 1434, 1452, 1685
TscAI CASTG 6 cut(s) 310, 357, 427, 1079, 1425, 1678
TseFI GTSAC 4 cut(s) 146, 1531, 1591, 1673
TseI GCWGC 6 cut(s) 132, 191, 345, 741, 1319, 1499
Tsp45I GTSAC 4 cut(s) 146, 1531, 1591, 1673
TspDTI ATGAA 5 cut(s) 99, 209, 705, 981, 1384
TspGWI ACGGA 1 cut(s) 515
TspRI CASTG 6 cut(s) 310, 357, 427, 1079, 1425, 1678
Van91I CCANNNNNTGG 2 cut(s) 1344, 1493
Vha464I CTTAAG 1 cut(s) 799
VpaK11BI GGWCC 3 cut(s) 229, 1190, 1288
XapI RAATTY 6 cut(s) 40, 309, 368, 788, 1144, 1383
XceI RCATGY 1 cut(s) 253
XcmI CCANNNNNNNNNTGG 2 cut(s) 1698, 1715
XmiI GTMKAC 1 cut(s) 1478
XmnI GAANNNNTTC 1 cut(s) 900
XspI CTAG 1 cut(s) 818
ZrmI AGTACT 1 cut(s) 914
Zsp2I ATGCAT 2 cut(s) 205, 619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.