Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000966

Physical Location & Seq

Genomic Coordinates Reverse (-)

2735083 .. 2741329

Gene Structure 6247 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00280080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGAAGAAGCAAGTAAAGAGAAATATTCGAAAGAAAACAGCACAAGTTTCCTCATCATCAGCAGAAACTGTAGCCAACATCGAAGAGCTCCTCACACAGATCCTCTTGCTCGTGCCAGCCGGAACCCTAATCCTCTTCAAATCCGTCTCCAAGCAATGGCTTTCTCTTGTGAATCATGAAAACTTGGCGTGTTCGAGATTTGCCATTGCATTTCTTGCTAGAGTCTGCAAACTCTTTGGGAAAACTATGGATTCTGAAGAACAGGTTTCCCTTCAAATTCCATCTCTCATCAAATACATATCCTCTAATGAAGTGGTTGGTTTCGATAATGTTGAGGAGCATACCATTCTCAATGGTAAGCCGCAACCATCAGCTGAGAAAATTGAGATAGCTGCTTTAGAAAGCACAGTAGATGAATATGAACCACCAATTCATCAAAGGATGCACTCTGTTTCTATTAGTATGCCGCCATCACCCGTGGAAGTTCATTTAGAGAAAATAAAAGGAATTCTCTTCAGTCCTGAAACAATTTTCAACGGTGGAATTCCAGATTCTTCTTCTGCTGCAATTAAGAGTGCTAGTAGCAGCAAACTTCCCGAAGCAGCAAAGTGTCACTCTCAACCCTTGCCAAAAGGCTCTGCATTTGAAGATCAGGCAACGCACGCTGGGCATTTCCCCTATCATCCAAGTATTAAAACGCTGAGAGATAACAGGTTTGATAATTTCAAGACATGGTCCGGGAAATTTGAAAGGCAGATAACACTACTACGGGGAAAGACACCGCGAAAAAGTGATGAACCAGAGAATGCTTTTGCTCAAAGTACAGATCAAGTTGACAGTTTACCTGCAGACCGTTACTTTGATGCATTGGAAGGGCCTGAGTTGGACACTCTTAGGGCTTCAGAGGAAATAATGCTTCCAGAGGACAAGCAGTGGCCATTTCTTCTCCGGTATCCCATTTCTTCATTTAGCATCTGCCTTGGTGTCAGCAGCCAAGCTATTTTGTGGAAAACCATACCTACCTCGGCCTCCACGAAATTTCTCCACTTGAACCTTAAAACAAATTTGGTTCTGTGGTGCATTGCCGTTGCTACATTAGTTGGTGTTGCTTGCATCTACCTTCTTAAAATCATCTTTTACTTTGAAGCAGTTCGTCGCGAGTATTTCCACCCAATTAGAATCAACTTCTTCTTTTCCCCATTTATAGCCATCTTATTCTTAGCTCTAGGAGTGCCACCTTCCATTTCTAGCAACCTCCATCCAGCTCTCTGGTACATCCTCATGACCCCACTTTTATGTCTTGAGCTTAAAATCTATGGGCAGTGGATGTCAGGAGGGCAACGCCGGCTTTCAAAAGTAGCCAATCCTGTTAACCATCTCTCCGTTGTTGGCAACTTTGTGGGGGCTCTGCTAGGTGCTTCAATGGGACTAAGAGAAGGACCAATATTCTTTTCGCAGTTGGGATGGCTCACTATATGGTTCTCATTGGCATGGTGGGCATACACTTTCCCAATGACTGGTGCTGCCATTGCAACCATCAGGTACTCGAATGAAGTAACGACTGTAGCAACTCAAGCTTTGGCTGTCATGCTCTCCATCATTGCCACTCTCACGGTCACTGCTCTCTTCATAACAACCGTCTTGCATGCCTTTGTGCTCCAAGACCTCTTCCCCAATGACATTGCAATTGCCATCAGCGACAGAAGCCCAAATGTACCACGCAGAAAGTGGTTCCATCTAAAAAATGGAACCTCTTCGGATTCAAAAGACATTGAGAATTTCTTGAAGTCAGCAACAAGCTCAGAAAAAAAGGATTTGGAAATTAAAACGTTACTTGAAACTGCCAAGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005253 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006821 GO:0006873 GO:0006950 GO:0006970 GO:0008150 GO:0008308 GO:0008509 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009987 GO:0010035 GO:0015075 GO:0015103 GO:0015267 GO:0015318 GO:0015698 GO:0016020 GO:0019725 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022857 GO:0034220 GO:0042221 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071944 GO:0098656 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SLAC1

Protein Analysis

617

Amino Acids

68.73

Weight (kDa)

8.62

Isoelectric Point (pI)

47.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SLAC1	PF03595	318 - 477	6.2e-16	Voltage-dependent anion channel
SLAC1	PF03595	486 - 547	6.2e-08	Voltage-dependent anion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000966)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27970 AT4G27970 AT4G27970 AT4G27970 AT4G27970 AT4G27970 AT5G24030 AT5G24030
fragaria_vesca	FvH4_7g30630 FvH4_7g30630 FvH4_7g30630 FvH4_7g30640 FvH4_7g30640 FvH4_7g30640 FvH4_7g30640
malus_domestica	MD01G1211400.v1.1 MD01G1211500.v1.1 MD07G1282100.v1.1
prunus_persica	Prupe.2G291700_v2.0.a1 Prupe.2G304200_v2.0.a1 Prupe.2G304300_v2.0.a1 Prupe.2G304300_v2.0.a1 Prupe.2G304300_v2.0.a1
pyrus_communis	pycom01g22190 pycom01g22200 pycom07g25600
rosa_chinensis	RchiOBHm_Chr1g0369441 RchiOBHm_Chr1g0379541 RchiOBHm_Chr1g0379571
rosa_laevigata	RLG00000026393 RLG00000026394 RLG00000027130
rosa_multiflora	Rmu_co8329679.1_g000001 Rmu_sc0000402.1_g000002 Rmu_sc0000402.1_g000005 Rmu_sc0001985.1_g000002 Rmu_sc0003612.1_g000018 Rmu_sc0024534.1_g000001
rosa_roxburghii	Rroxscaffold_4G00280080 Rroxscaffold_4G00280090 Rroxscaffold_4G00287650
rosa_rugosa	Rorug01G0350200 Rorug01G0350200 Rorug01G0413000
rosa_samantha	Rh1AG357900 Rh1AG435500 Rh1AG435600 Rh1BG322000 Rh1BG393100 Rh1BG393200 Rh1CG335700 Rh1CG405800 Rh1CG405900 Rh1DG352600 Rh1DG423900 Rh1DG424000
rosa_wichuraiana	Rw0G019950 Rw1G031570 Rw1G031580 Rw1G038040 Rw1G038050 Rw1G038070 Rw1G038080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	853
AccB7I	CCANNNNNTGG	2 cut(s)	156, 1517
AccII	CGCG	2 cut(s)	784, 1158
AciI	CCGC	3 cut(s)	362, 467, 782
AclI	AACGTT	1 cut(s)	1829
AclWI	GGATC	1 cut(s)	94
AcoI	YGGCCR	1 cut(s)	935
AcsI	RAATTY	7 cut(s)	276, 507, 543, 743, 1037, 1063, 1777
AcuI	CTGAAG	3 cut(s)	276, 499, 885
AfaI	GTAC	4 cut(s)	823, 1274, 1544, 1716
AfiI	CCNNNNNNNGG	2 cut(s)	156, 1517
AjuI	GAANNNNNNNTTGG	2 cut(s)	1435, 1467
Alw21I	GWGCWC	2 cut(s)	90, 1659
Alw26I	GTCTC	1 cut(s)	151
AlwI	GGATC	1 cut(s)	94
AlwNI	CAGNNNCTG	1 cut(s)	68
AoxI	GGCC	3 cut(s)	875, 935, 1026
ApeKI	GCWGC	6 cut(s)	392, 563, 585, 602, 990, 1523
ApoI	RAATTY	7 cut(s)	276, 507, 543, 743, 1037, 1063, 1777
ArsI	GACNNNNNNTTYG	2 cut(s)	842, 874
Asp700I	GAANNNNTTC	2 cut(s)	1149, 1753
AspS9I	GGNCC	3 cut(s)	735, 875, 1439
AsuC2I	CCSGG	1 cut(s)	739
AsuHPI	GGTGA	1 cut(s)	465
AsuII	TTCGAA	1 cut(s)	28
AvaII	GGWCC	2 cut(s)	735, 1439
BalI	TGGCCA	1 cut(s)	937
BanII	GRGCYC	2 cut(s)	90, 1408
BauI	CACGAG	1 cut(s)	110
Bbv12I	GWGCWC	2 cut(s)	90, 1659
BbvI	GCAGC	6 cut(s)	379, 550, 597, 614, 1002, 1510
BceAI	ACGGC	1 cut(s)	1070
BciVI	GTATCC	1 cut(s)	963
BcnI	CCSGG	1 cut(s)	739
BcoDI	GTCTC	1 cut(s)	151
BfaI	CTAG	6 cut(s)	219, 579, 1226, 1248, 1412, 1852
BfmI	CTRYAG	3 cut(s)	69, 846, 1563
BfuAI	ACCTGC	1 cut(s)	853
BfuI	GTATCC	1 cut(s)	963
BisI	GCNGC	8 cut(s)	362, 393, 467, 564, 586, 603, 991, 1524
BlsI	GCNGC	8 cut(s)	363, 394, 468, 565, 587, 604, 992, 1525
Bme1390I	CCNGG	1 cut(s)	739
Bme18I	GGWCC	2 cut(s)	735, 1439
BmgT120I	GGNCC	3 cut(s)	735, 875, 1439
BmiI	GGNNCC	3 cut(s)	124, 1733, 1750
BmrFI	CCNGG	1 cut(s)	739
BmsI	GCATC	4 cut(s)	432, 853, 981, 1122
Bpu14I	TTCGAA	1 cut(s)	28
BpuEI	CTTGAG	2 cut(s)	1322, 1557
BpuMI	CCSGG	1 cut(s)	739
BsaJI	CCNNGG	3 cut(s)	477, 979, 1023
BsaWI	WCCGGW	1 cut(s)	948
BsaXI	ACNNNNNCTCC	2 cut(s)	1364, 1394
Bsc4I	CCNNNNNNNGG	2 cut(s)	156, 1517
Bse118I	RCCGGY	1 cut(s)	1344
Bse1I	ACTGG	1 cut(s)	1522
Bse3DI	GCAATG	6 cut(s)	161, 204, 1080, 1527, 1599, 1680
BseDI	CCNNGG	3 cut(s)	477, 979, 1023
BseGI	GGATG	6 cut(s)	447, 682, 1258, 1275, 1332, 1469
BseLI	CCNNNNNNNGG	2 cut(s)	156, 1517
BseMI	GCAATG	6 cut(s)	161, 204, 1080, 1527, 1599, 1680
BseMII	CTCAG	4 cut(s)	366, 692, 870, 1815
BseNI	ACTGG	1 cut(s)	1522
BseRI	GAGGAG	2 cut(s)	80, 350
BseXI	GCAGC	6 cut(s)	379, 550, 597, 614, 1002, 1510
BseYI	CCCAGC	1 cut(s)	665
Bsh1236I	CGCG	2 cut(s)	784, 1158
BshFI	GGCC	3 cut(s)	877, 937, 1028
BsiHKAI	GWGCWC	2 cut(s)	90, 1659
BsiSI	CCGG	4 cut(s)	120, 738, 949, 1345
BslFI	GGGAC	1 cut(s)	1440
BslI	CCNNNNNNNGG	2 cut(s)	156, 1517
BsmAI	GTCTC	1 cut(s)	151
BsmBI	CGTCTC	1 cut(s)	151
BsmFI	GGGAC	1 cut(s)	1440
BsmI	GAATGC	1 cut(s)	811
BsnI	GGCC	3 cut(s)	877, 937, 1028
Bsp119I	TTCGAA	1 cut(s)	28
Bsp1286I	GDGCHC	3 cut(s)	90, 1408, 1659
Bsp143I	GATC	3 cut(s)	99, 649, 826
Bsp68I	TCGCGA	1 cut(s)	1158
BspACI	CCGC	3 cut(s)	362, 467, 782
BspANI	GGCC	3 cut(s)	877, 937, 1028
BspCNI	CTCAG	4 cut(s)	367, 693, 871, 1814
BspFNI	CGCG	2 cut(s)	784, 1158
BspHI	TCATGA	2 cut(s)	175, 1281
BspLI	GGNNCC	3 cut(s)	124, 1733, 1750
BspMAI	CTGCAG	1 cut(s)	850
BspMI	ACCTGC	1 cut(s)	853
BspPI	GGATC	1 cut(s)	94
BspQI	GCTCTTC	1 cut(s)	78
BspT104I	TTCGAA	1 cut(s)	28
BsrDI	GCAATG	6 cut(s)	161, 204, 1080, 1527, 1599, 1680
BsrFI	RCCGGY	1 cut(s)	1344
BsrI	ACTGG	1 cut(s)	1522
BssAI	RCCGGY	1 cut(s)	1344
BssECI	CCNNGG	3 cut(s)	477, 979, 1023
BssMI	GATC	3 cut(s)	99, 649, 826
BssSI	CACGAG	1 cut(s)	110
BssT1I	CCWWGG	1 cut(s)	979
Bst2BI	CACGAG	1 cut(s)	110
Bst4CI	ACNGT	8 cut(s)	70, 409, 539, 839, 854, 1564, 1615, 1639
Bst6I	CTCTTC	6 cut(s)	78, 140, 518, 1631, 1673, 1759
BstAPI	GCANNNNNTGC	1 cut(s)	215
BstBI	TTCGAA	1 cut(s)	28
BstC8I	GCNNGC	5 cut(s)	117, 663, 1111, 1346, 1647
BstDEI	CTNAG	7 cut(s)	375, 701, 879, 893, 1219, 1430, 1801
BstDSI	CCRYGG	1 cut(s)	477
BstF5I	GGATG	6 cut(s)	447, 682, 1258, 1275, 1332, 1469
BstFNI	CGCG	2 cut(s)	784, 1158
BstKTI	GATC	3 cut(s)	102, 652, 829
BstMAI	GTCTC	1 cut(s)	151
BstMBI	GATC	3 cut(s)	99, 649, 826
BstMWI	GCNNNNNNNGC	8 cut(s)	215, 662, 667, 1345, 1496, 1529, 1574, 1704
BstNSI	RCATGY	1 cut(s)	1649
BstSCI	CCNGG	1 cut(s)	737
BstSFI	CTRYAG	3 cut(s)	69, 846, 1563
BstUI	CGCG	2 cut(s)	784, 1158
BstV1I	GCAGC	6 cut(s)	379, 550, 597, 614, 1002, 1510
BstX2I	RGATCY	1 cut(s)	99
BstXI	CCANNNNNNTGG	1 cut(s)	1269
BstYI	RGATCY	1 cut(s)	99
BsuI	GTATCC	1 cut(s)	963
BsuRI	GGCC	3 cut(s)	877, 937, 1028
BtgI	CCRYGG	1 cut(s)	477
BtsCI	GGATG	6 cut(s)	447, 682, 1258, 1275, 1332, 1469
BtsI	GCAGTG	3 cut(s)	938, 1328, 1617
BtsIMutI	CAGTG	3 cut(s)	938, 1328, 1617
BtuMI	TCGCGA	1 cut(s)	1158
BveI	ACCTGC	1 cut(s)	853
Cac8I	GCNNGC	5 cut(s)	117, 663, 1111, 1346, 1647
CaiI	CAGNNNCTG	1 cut(s)	68
CciI	TCATGA	2 cut(s)	175, 1281
Cfr10I	RCCGGY	1 cut(s)	1344
Cfr13I	GGNCC	3 cut(s)	735, 875, 1439
Csp6I	GTAC	4 cut(s)	822, 1273, 1543, 1715
CviAII	CATG	6 cut(s)	176, 732, 1282, 1491, 1588, 1646
CviQI	GTAC	4 cut(s)	822, 1273, 1543, 1715
DdeI	CTNAG	7 cut(s)	375, 701, 879, 893, 1219, 1430, 1801
DpnI	GATC	3 cut(s)	101, 651, 828
DpnII	GATC	3 cut(s)	99, 649, 826
EaeI	YGGCCR	1 cut(s)	935
Eam1104I	CTCTTC	6 cut(s)	78, 140, 518, 1631, 1673, 1759
EarI	CTCTTC	6 cut(s)	78, 140, 518, 1631, 1673, 1759
Ecl136II	GAGCTC	1 cut(s)	88
Eco130I	CCWWGG	1 cut(s)	979
Eco24I	GRGCYC	2 cut(s)	90, 1408
Eco47I	GGWCC	2 cut(s)	735, 1439
Eco53kI	GAGCTC	1 cut(s)	88
Eco57I	CTGAAG	3 cut(s)	276, 499, 885
EcoICRI	GAGCTC	1 cut(s)	88
EcoO109I	RGGNCCY	1 cut(s)	875
EcoRI	GAATTC	2 cut(s)	507, 543
EcoT14I	CCWWGG	1 cut(s)	979
EcoT22I	ATGCAT	1 cut(s)	868
EcoT38I	GRGCYC	2 cut(s)	90, 1408
ErhI	CCWWGG	1 cut(s)	979
Esp3I	CGTCTC	1 cut(s)	151
FaeI	CATG	6 cut(s)	179, 735, 1285, 1494, 1591, 1649
FaqI	GGGAC	1 cut(s)	1440
FatI	CATG	6 cut(s)	175, 731, 1281, 1490, 1587, 1645
Fnu4HI	GCNGC	8 cut(s)	362, 393, 467, 564, 586, 603, 991, 1524
FokI	GGATG	6 cut(s)	454, 669, 1245, 1262, 1339, 1476
FriOI	GRGCYC	2 cut(s)	90, 1408
Fsp4HI	GCNGC	8 cut(s)	362, 393, 467, 564, 586, 603, 991, 1524
FspBI	CTAG	6 cut(s)	219, 579, 1226, 1248, 1412, 1852
GluI	GCNGC	8 cut(s)	362, 393, 467, 564, 586, 603, 991, 1524
GsaI	CCCAGC	1 cut(s)	669
HaeIII	GGCC	3 cut(s)	877, 937, 1028
HapII	CCGG	4 cut(s)	120, 738, 949, 1345
Hin1II	CATG	6 cut(s)	179, 735, 1285, 1494, 1591, 1649
HincII	GTYRAC	2 cut(s)	835, 1372
HindII	GTYRAC	2 cut(s)	835, 1372
HindIII	AAGCTT	1 cut(s)	1575
HinfI	GANTC	6 cut(s)	172, 222, 251, 551, 1179, 1760
HpaI	GTTAAC	1 cut(s)	1372
HpaII	CCGG	4 cut(s)	120, 738, 949, 1345
HphI	GGTGA	1 cut(s)	465
Hpy166II	GTNNAC	3 cut(s)	835, 842, 1372
Hpy188I	TCNGA	4 cut(s)	256, 904, 1759, 1804
Hpy8I	GTNNAC	3 cut(s)	835, 842, 1372
Hpy99I	CGWCG	1 cut(s)	1158
HpyAV	CCTTC	5 cut(s)	281, 866, 1130, 1248, 1430
HpyCH4III	ACNGT	8 cut(s)	70, 409, 539, 839, 854, 1564, 1615, 1639
HpyCH4IV	ACGT	1 cut(s)	1829
HpyF10VI	GCNNNNNNNGC	8 cut(s)	215, 662, 667, 1345, 1496, 1529, 1574, 1704
HpyF3I	CTNAG	7 cut(s)	375, 701, 879, 893, 1219, 1430, 1801
HpySE526I	ACGT	1 cut(s)	1829
Hsp92II	CATG	6 cut(s)	179, 735, 1285, 1494, 1591, 1649
KroI	GCCGGC	1 cut(s)	1344
KroNI	GCCGGC	1 cut(s)	1346
KspAI	GTTAAC	1 cut(s)	1372
Kzo9I	GATC	3 cut(s)	99, 649, 826
LguI	GCTCTTC	1 cut(s)	78
LmnI	GCTCC	3 cut(s)	93, 337, 1662
Lsp1109I	GCAGC	6 cut(s)	379, 550, 597, 614, 1002, 1510
LweI	GCATC	4 cut(s)	432, 853, 981, 1122
MaeI	CTAG	6 cut(s)	219, 579, 1226, 1248, 1412, 1852
MaeII	ACGT	1 cut(s)	1829
MaeIII	GTNAC	5 cut(s)	611, 854, 1555, 1615, 1830
MalI	GATC	3 cut(s)	101, 651, 828
MboI	GATC	3 cut(s)	99, 649, 826
MfeI	CAATTG	1 cut(s)	1686
MflI	RGATCY	1 cut(s)	99
MhlI	GDGCHC	3 cut(s)	90, 1408, 1659
MlsI	TGGCCA	1 cut(s)	937
MluNI	TGGCCA	1 cut(s)	937
MlyI	GAGTC	1 cut(s)	231
MmeI	TCCRAC	1 cut(s)	864
Mox20I	TGGCCA	1 cut(s)	937
Mph1103I	ATGCAT	1 cut(s)	868
MroNI	GCCGGC	1 cut(s)	1344
MroXI	GAANNNNTTC	2 cut(s)	1149, 1753
MscI	TGGCCA	1 cut(s)	937
MseI	TTAA	7 cut(s)	570, 693, 1056, 1125, 1308, 1371, 1824
MslI	CAYNNNNRTG	3 cut(s)	1280, 1294, 1489
Msp20I	TGGCCA	1 cut(s)	937
MspA1I	CMGCKG	1 cut(s)	374
MspI	CCGG	4 cut(s)	120, 738, 949, 1345
MspR9I	CCNGG	1 cut(s)	739
MunI	CAATTG	1 cut(s)	1686
Mva1269I	GAATGC	1 cut(s)	811
MvnI	CGCG	2 cut(s)	784, 1158
MwoI	GCNNNNNNNGC	8 cut(s)	215, 662, 667, 1345, 1496, 1529, 1574, 1704
NaeI	GCCGGC	1 cut(s)	1346
NciI	CCSGG	1 cut(s)	739
NdeII	GATC	3 cut(s)	99, 649, 826
NgoMIV	GCCGGC	1 cut(s)	1344
NlaIII	CATG	6 cut(s)	179, 735, 1285, 1494, 1591, 1649
NlaIV	GGNNCC	3 cut(s)	124, 1733, 1750
NmeAIII	GCCGAG	1 cut(s)	1004
NmuCI	GTSAC	2 cut(s)	611, 1615
NruI	TCGCGA	1 cut(s)	1158
NsiI	ATGCAT	1 cut(s)	868
NspI	RCATGY	1 cut(s)	1649
NspV	TTCGAA	1 cut(s)	28
PaeI	GCATGC	1 cut(s)	1649
PagI	TCATGA	2 cut(s)	175, 1281
PciSI	GCTCTTC	1 cut(s)	78
PcsI	WCGNNNNNNNCGW	1 cut(s)	1031
PctI	GAATGC	1 cut(s)	811
PdiI	GCCGGC	1 cut(s)	1346
PdmI	GAANNNNTTC	2 cut(s)	1149, 1753
PfeI	GAWTC	5 cut(s)	172, 251, 551, 1179, 1760
PflFI	GACNNNGTC	1 cut(s)	733
PflMI	CCANNNNNTGG	2 cut(s)	156, 1517
PfoI	TCCNGGA	1 cut(s)	737
PkrI	GCNGC	8 cut(s)	363, 394, 468, 565, 587, 604, 992, 1525
PleI	GAGTC	1 cut(s)	230
PpsI	GAGTC	1 cut(s)	230
Psp124BI	GAGCTC	1 cut(s)	90
Psp1406I	AACGTT	1 cut(s)	1829
PspFI	CCCAGC	1 cut(s)	665
PspN4I	GGNNCC	3 cut(s)	124, 1733, 1750
PspPI	GGNCC	3 cut(s)	735, 875, 1439
PstI	CTGCAG	1 cut(s)	850
PstNI	CAGNNNCTG	1 cut(s)	68
PsuI	RGATCY	1 cut(s)	99
PsyI	GACNNNGTC	1 cut(s)	733
PvuII	CAGCTG	1 cut(s)	374
RruI	TCGCGA	1 cut(s)	1158
RsaI	GTAC	4 cut(s)	823, 1274, 1544, 1716
RsaNI	GTAC	4 cut(s)	822, 1273, 1543, 1715
RseI	CAYNNNNRTG	3 cut(s)	1280, 1294, 1489
SacI	GAGCTC	1 cut(s)	90
SapI	GCTCTTC	1 cut(s)	78
SaqAI	TTAA	7 cut(s)	570, 693, 1056, 1125, 1308, 1371, 1824
SatI	GCNGC	8 cut(s)	362, 393, 467, 564, 586, 603, 991, 1524
Sau3AI	GATC	3 cut(s)	99, 649, 826
Sau96I	GGNCC	3 cut(s)	735, 875, 1439
SchI	GAGTC	1 cut(s)	231
ScrFI	CCNGG	1 cut(s)	739
SduI	GDGCHC	3 cut(s)	90, 1408, 1659
SfaNI	GCATC	4 cut(s)	432, 853, 981, 1122
SfcI	CTRYAG	3 cut(s)	69, 846, 1563
SfuI	TTCGAA	1 cut(s)	28
SinI	GGWCC	2 cut(s)	735, 1439
SmiMI	CAYNNNNRTG	3 cut(s)	1280, 1294, 1489
SmlI	CTYRAG	2 cut(s)	1301, 1572
SmoI	CTYRAG	2 cut(s)	1301, 1572
SphI	GCATGC	1 cut(s)	1649
SsiI	CCGC	3 cut(s)	362, 467, 782
SspI	AATATT	2 cut(s)	25, 1446
SspMI	CTAG	6 cut(s)	219, 579, 1226, 1248, 1412, 1852
SstI	GAGCTC	1 cut(s)	90
StyD4I	CCNGG	1 cut(s)	737
StyI	CCWWGG	1 cut(s)	979
TaaI	ACNGT	8 cut(s)	70, 409, 539, 839, 854, 1564, 1615, 1639
TaiI	ACGT	1 cut(s)	1832
TaqI	TCGA	5 cut(s)	28, 81, 194, 324, 1547
TatI	WGTACW	1 cut(s)	821
TauI	GCSGC	2 cut(s)	364, 469
TfiI	GAWTC	5 cut(s)	172, 251, 551, 1179, 1760
Tru1I	TTAA	7 cut(s)	570, 693, 1056, 1125, 1308, 1371, 1824
Tru9I	TTAA	7 cut(s)	570, 693, 1056, 1125, 1308, 1371, 1824
TscAI	CASTG	3 cut(s)	938, 1328, 1624
TseFI	GTSAC	2 cut(s)	611, 1615
TseI	GCWGC	6 cut(s)	392, 563, 585, 602, 990, 1523
Tsp45I	GTSAC	2 cut(s)	611, 1615
TspGWI	ACGGA	2 cut(s)	133, 1372
TspRI	CASTG	3 cut(s)	938, 1328, 1624
Tth111I	GACNNNGTC	1 cut(s)	733
Van91I	CCANNNNNTGG	2 cut(s)	156, 1517
VpaK11BI	GGWCC	2 cut(s)	735, 1439
XapI	RAATTY	7 cut(s)	276, 507, 543, 743, 1037, 1063, 1777
XceI	RCATGY	1 cut(s)	1649
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1725, 1742
XmnI	GAANNNNTTC	2 cut(s)	1149, 1753
XspI	CTAG	6 cut(s)	219, 579, 1226, 1248, 1412, 1852
Zsp2I	ATGCAT	1 cut(s)	868

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.