Rapid ALkalinization Factor (RALF)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G23145 AT1G23147 AT1G60625 AT1G60815 AT1G60913 AT1G61563 AT1G61566 AT2G22055 AT2G32835 AT3G04735 AT4G11510 |
| fragaria_vesca | FvH4_6g41850 |
| prunus_persica | Prupe.3G207900_v2.0.a1 |
| rosa_roxburghii | Rroxscaffold_2G00092030 Rroxscaffold_2G00092050 Rroxscaffold_2G00107720 Rroxscaffold_2G00107730 |
| rosa_samantha | Rh2AG386600 Rh2AG386700 Rh2BG541700 Rh2CG373900 Rh2CG374000 Rh2DG409600 |
| rosa_wichuraiana | Rw2G031640 Rw2G043630 Rw2G043650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 28 |
| AcuI | CTGAAG | 1 cut(s) | 219 |
| AjnI | CCWGG | 1 cut(s) | 124 |
| AluBI | AGCT | 1 cut(s) | 135 |
| AluI | AGCT | 1 cut(s) | 135 |
| ApeKI | GCWGC | 2 cut(s) | 39, 132 |
| AspLEI | GCGC | 1 cut(s) | 104 |
| AsuHPI | GGTGA | 1 cut(s) | 80 |
| BbvI | GCAGC | 2 cut(s) | 51, 144 |
| BciT130I | CCWGG | 1 cut(s) | 126 |
| BfoI | RGCGCY | 1 cut(s) | 105 |
| BisI | GCNGC | 2 cut(s) | 40, 133 |
| BlsI | GCNGC | 2 cut(s) | 41, 134 |
| Bme1390I | CCNGG | 1 cut(s) | 126 |
| BmrFI | CCNGG | 1 cut(s) | 126 |
| BmsI | GCATC | 3 cut(s) | 119, 151, 197 |
| BpuEI | CTTGAG | 1 cut(s) | 106 |
| BsaJI | CCNNGG | 1 cut(s) | 12 |
| Bse3DI | GCAATG | 1 cut(s) | 24 |
| BseBI | CCWGG | 1 cut(s) | 126 |
| BseDI | CCNNGG | 1 cut(s) | 12 |
| BseGI | GGATG | 2 cut(s) | 134, 142 |
| BseMI | GCAATG | 1 cut(s) | 24 |
| BseMII | CTCAG | 1 cut(s) | 212 |
| BseXI | GCAGC | 2 cut(s) | 51, 144 |
| BsiSI | CCGG | 1 cut(s) | 211 |
| BspCNI | CTCAG | 1 cut(s) | 213 |
| BsrDI | GCAATG | 1 cut(s) | 24 |
| BssECI | CCNNGG | 1 cut(s) | 12 |
| BssT1I | CCWWGG | 1 cut(s) | 12 |
| Bst2UI | CCWGG | 1 cut(s) | 126 |
| Bst4CI | ACNGT | 2 cut(s) | 25, 218 |
| BstDEI | CTNAG | 1 cut(s) | 221 |
| BstF5I | GGATG | 2 cut(s) | 134, 142 |
| BstH2I | RGCGCY | 1 cut(s) | 105 |
| BstHHI | GCGC | 1 cut(s) | 104 |
| BstNI | CCWGG | 1 cut(s) | 126 |
| BstSCI | CCNGG | 1 cut(s) | 124 |
| BstV1I | GCAGC | 2 cut(s) | 51, 144 |
| BtsCI | GGATG | 2 cut(s) | 134, 142 |
| CfoI | GCGC | 1 cut(s) | 104 |
| CviJI | RGCY | 6 cut(s) | 5, 42, 84, 96, 135, 196 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 42, 84, 96, 135, 196 |
| DdeI | CTNAG | 1 cut(s) | 221 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 28 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 28 |
| Eco130I | CCWWGG | 1 cut(s) | 12 |
| Eco57I | CTGAAG | 1 cut(s) | 219 |
| EcoRII | CCWGG | 1 cut(s) | 124 |
| EcoT14I | CCWWGG | 1 cut(s) | 12 |
| EcoT22I | ATGCAT | 1 cut(s) | 144 |
| ErhI | CCWWGG | 1 cut(s) | 12 |
| FaiI | YATR | 3 cut(s) | 99, 140, 178 |
| Fnu4HI | GCNGC | 2 cut(s) | 40, 133 |
| FokI | GGATG | 2 cut(s) | 129, 141 |
| Fsp4HI | GCNGC | 2 cut(s) | 40, 133 |
| GlaI | GCGC | 1 cut(s) | 103 |
| GluI | GCNGC | 2 cut(s) | 40, 133 |
| HaeII | RGCGCY | 1 cut(s) | 105 |
| HapII | CCGG | 1 cut(s) | 211 |
| HhaI | GCGC | 1 cut(s) | 104 |
| Hin6I | GCGC | 1 cut(s) | 102 |
| HinP1I | GCGC | 1 cut(s) | 102 |
| HpaII | CCGG | 1 cut(s) | 211 |
| HphI | GGTGA | 1 cut(s) | 80 |
| Hpy188I | TCNGA | 1 cut(s) | 222 |
| Hpy188III | TCNNGA | 2 cut(s) | 111, 146 |
| HpyCH4III | ACNGT | 2 cut(s) | 25, 218 |
| HpyCH4V | TGCA | 3 cut(s) | 56, 132, 142 |
| HpyF3I | CTNAG | 1 cut(s) | 221 |
| HspAI | GCGC | 1 cut(s) | 102 |
| LpnPI | CCDG | 5 cut(s) | 111, 138, 159, 210, 224 |
| Lsp1109I | GCAGC | 2 cut(s) | 51, 144 |
| LweI | GCATC | 3 cut(s) | 119, 151, 197 |
| MboII | GAAGA | 3 cut(s) | 83, 178, 212 |
| MnlI | CCTC | 3 cut(s) | 53, 73, 81 |
| Mph1103I | ATGCAT | 1 cut(s) | 144 |
| MseI | TTAA | 1 cut(s) | 35 |
| MspI | CCGG | 1 cut(s) | 211 |
| MspR9I | CCNGG | 1 cut(s) | 126 |
| MvaI | CCWGG | 1 cut(s) | 126 |
| NsiI | ATGCAT | 1 cut(s) | 144 |
| PfoI | TCCNGGA | 1 cut(s) | 124 |
| PkrI | GCNGC | 2 cut(s) | 41, 134 |
| Psp6I | CCWGG | 1 cut(s) | 124 |
| PspGI | CCWGG | 1 cut(s) | 124 |
| SaqAI | TTAA | 1 cut(s) | 35 |
| SatI | GCNGC | 2 cut(s) | 40, 133 |
| ScrFI | CCNGG | 1 cut(s) | 126 |
| SetI | ASST | 1 cut(s) | 137 |
| SfaNI | GCATC | 3 cut(s) | 119, 151, 197 |
| SgeI | CNNG | 9 cut(s) | 25, 59, 97, 123, 137, 138, 158, 209, 223 |
| SmlI | CTYRAG | 1 cut(s) | 85 |
| SmoI | CTYRAG | 1 cut(s) | 85 |
| SspI | AATATT | 1 cut(s) | 60 |
| StyD4I | CCNGG | 1 cut(s) | 124 |
| StyI | CCWWGG | 1 cut(s) | 12 |
| TaaI | ACNGT | 2 cut(s) | 25, 218 |
| Tru1I | TTAA | 1 cut(s) | 35 |
| Tru9I | TTAA | 1 cut(s) | 35 |
| TseI | GCWGC | 2 cut(s) | 39, 132 |
| TspDTI | ATGAA | 1 cut(s) | 179 |
| Zsp2I | ATGCAT | 1 cut(s) | 144 |