Glycine-rich RNA-binding protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08000 |
| fragaria_vesca | FvH4_6g42480 FvH4_6g42480 |
| malus_domestica | MD09G1112700.v1.1 MD17G1102800.v1.1 |
| prunus_persica | Prupe.3G211900_v2.0.a1 Prupe.3G211900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0158391 RchiOBHm_Chr4g0419191 |
| rosa_laevigata | RLG00000021082 |
| rosa_roxburghii | Rroxscaffold_2G00091440 |
| rosa_rugosa | Rorug02G0467400 Rorug02G0467500 Rorug02G0467600 Rorug02G0467700 Rorug02G0467900 Rorug02G0468000 Rorug02G0468100 |
| rosa_samantha | Rh2AG533800 Rh2AG534400 Rh2BG547500 Rh2BG547900 Rh2CG517800 Rh2CG518200 Rh2DG557100 Rh2DG557500 Rh4AG219500 Rh4BG221000 Rh4DG218500 |
| rosa_wichuraiana | Rw2G044180 Rw2G044230 Rw2G044260 Rw4G018740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 79, 372 |
| AcoI | YGGCCR | 1 cut(s) | 332 |
| AcsI | RAATTY | 1 cut(s) | 67 |
| AcuI | CTGAAG | 1 cut(s) | 228 |
| AflIII | ACRYGT | 1 cut(s) | 376 |
| AgsI | TTSAA | 1 cut(s) | 175 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 166 |
| AjnI | CCWGG | 1 cut(s) | 288 |
| AleI | CACNNNNGTG | 1 cut(s) | 209 |
| AluBI | AGCT | 1 cut(s) | 130 |
| AluI | AGCT | 1 cut(s) | 130 |
| Alw26I | GTCTC | 1 cut(s) | 225 |
| AoxI | GGCC | 2 cut(s) | 115, 332 |
| ApoI | RAATTY | 1 cut(s) | 67 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 363 |
| AspS9I | GGNCC | 1 cut(s) | 116 |
| AsuHPI | GGTGA | 2 cut(s) | 84, 262 |
| BccI | CCATC | 2 cut(s) | 151, 305 |
| BciT130I | CCWGG | 1 cut(s) | 290 |
| BcoDI | GTCTC | 1 cut(s) | 225 |
| BfaI | CTAG | 3 cut(s) | 33, 246, 356 |
| Bme1390I | CCNGG | 1 cut(s) | 290 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 166 |
| BmgT120I | GGNCC | 1 cut(s) | 116 |
| BmiI | GGNNCC | 1 cut(s) | 387 |
| BmrFI | CCNGG | 1 cut(s) | 290 |
| BmsI | GCATC | 3 cut(s) | 274, 292, 400 |
| BsaJI | CCNNGG | 3 cut(s) | 273, 288, 306 |
| Bse1I | ACTGG | 1 cut(s) | 118 |
| Bse3DI | GCAATG | 1 cut(s) | 320 |
| BseBI | CCWGG | 1 cut(s) | 290 |
| BseDI | CCNNGG | 3 cut(s) | 273, 288, 306 |
| BseGI | GGATG | 1 cut(s) | 316 |
| BseMI | GCAATG | 1 cut(s) | 320 |
| BseMII | CTCAG | 1 cut(s) | 249 |
| BseNI | ACTGG | 1 cut(s) | 118 |
| BseRI | GAGGAG | 1 cut(s) | 97 |
| BseYI | CCCAGC | 1 cut(s) | 325 |
| BshFI | GGCC | 2 cut(s) | 117, 334 |
| BsmAI | GTCTC | 1 cut(s) | 225 |
| BsnI | GGCC | 2 cut(s) | 117, 334 |
| Bsp19I | CCATGG | 1 cut(s) | 306 |
| BspACI | CCGC | 2 cut(s) | 79, 372 |
| BspANI | GGCC | 2 cut(s) | 117, 334 |
| BspCNI | CTCAG | 1 cut(s) | 248 |
| BspLI | GGNNCC | 1 cut(s) | 387 |
| BspQI | GCTCTTC | 1 cut(s) | 137 |
| BsrDI | GCAATG | 1 cut(s) | 320 |
| BsrI | ACTGG | 1 cut(s) | 118 |
| BssECI | CCNNGG | 3 cut(s) | 273, 288, 306 |
| BssT1I | CCWWGG | 2 cut(s) | 273, 306 |
| Bst2UI | CCWGG | 1 cut(s) | 290 |
| Bst4CI | ACNGT | 2 cut(s) | 404, 419 |
| Bst6I | CTCTTC | 3 cut(s) | 106, 137, 193 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 302 |
| BstDEI | CTNAG | 1 cut(s) | 235 |
| BstDSI | CCRYGG | 1 cut(s) | 306 |
| BstF5I | GGATG | 1 cut(s) | 316 |
| BstMAI | GTCTC | 1 cut(s) | 225 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 293, 302, 331 |
| BstNI | CCWGG | 1 cut(s) | 290 |
| BstNSI | RCATGY | 1 cut(s) | 380 |
| BstSCI | CCNGG | 1 cut(s) | 288 |
| BsuRI | GGCC | 2 cut(s) | 117, 334 |
| BtgI | CCRYGG | 1 cut(s) | 306 |
| BtsCI | GGATG | 1 cut(s) | 316 |
| BtsIMutI | CAGTG | 2 cut(s) | 204, 409 |
| Cfr13I | GGNCC | 1 cut(s) | 116 |
| CseI | GACGC | 1 cut(s) | 188 |
| CviAII | CATG | 3 cut(s) | 150, 307, 377 |
| CviJI | RGCY | 5 cut(s) | 117, 130, 144, 252, 334 |
| CviKI_1 | RGCY | 5 cut(s) | 117, 130, 144, 252, 334 |
| DdeI | CTNAG | 1 cut(s) | 235 |
| DriI | GACNNNNNGTC | 1 cut(s) | 166 |
| EaeI | YGGCCR | 1 cut(s) | 332 |
| Eam1104I | CTCTTC | 3 cut(s) | 106, 137, 193 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 166 |
| EarI | CTCTTC | 3 cut(s) | 106, 137, 193 |
| EciI | GGCGGA | 1 cut(s) | 387 |
| Eco130I | CCWWGG | 2 cut(s) | 273, 306 |
| Eco57I | CTGAAG | 1 cut(s) | 228 |
| EcoRII | CCWGG | 1 cut(s) | 288 |
| EcoT14I | CCWWGG | 2 cut(s) | 273, 306 |
| ErhI | CCWWGG | 2 cut(s) | 273, 306 |
| FaeI | CATG | 3 cut(s) | 153, 310, 380 |
| FaiI | YATR | 6 cut(s) | 60, 151, 225, 308, 351, 378 |
| FatI | CATG | 3 cut(s) | 149, 306, 376 |
| FokI | GGATG | 1 cut(s) | 323 |
| FspBI | CTAG | 3 cut(s) | 33, 246, 356 |
| GsaI | CCCAGC | 1 cut(s) | 329 |
| HaeIII | GGCC | 2 cut(s) | 117, 334 |
| HgaI | GACGC | 1 cut(s) | 188 |
| Hin1II | CATG | 3 cut(s) | 153, 310, 380 |
| HincII | GTYRAC | 1 cut(s) | 21 |
| HindII | GTYRAC | 1 cut(s) | 21 |
| HinfI | GANTC | 1 cut(s) | 233 |
| HphI | GGTGA | 2 cut(s) | 84, 262 |
| Hpy166II | GTNNAC | 2 cut(s) | 21, 92 |
| Hpy188I | TCNGA | 1 cut(s) | 400 |
| Hpy188III | TCNNGA | 4 cut(s) | 33, 237, 246, 356 |
| Hpy8I | GTNNAC | 2 cut(s) | 21, 92 |
| HpyAV | CCTTC | 2 cut(s) | 202, 234 |
| HpyCH4III | ACNGT | 2 cut(s) | 404, 419 |
| HpyCH4IV | ACGT | 1 cut(s) | 73 |
| HpyCH4V | TGCA | 1 cut(s) | 296 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 293, 302, 331 |
| HpyF3I | CTNAG | 1 cut(s) | 235 |
| HpySE526I | ACGT | 1 cut(s) | 73 |
| Hsp92II | CATG | 3 cut(s) | 153, 310, 380 |
| LguI | GCTCTTC | 1 cut(s) | 137 |
| LpnPI | CCDG | 5 cut(s) | 99, 222, 275, 302, 311 |
| LweI | GCATC | 3 cut(s) | 274, 292, 400 |
| MaeI | CTAG | 3 cut(s) | 33, 246, 356 |
| MaeII | ACGT | 1 cut(s) | 73 |
| MaeIII | GTNAC | 2 cut(s) | 202, 343 |
| MboII | GAAGA | 6 cut(s) | 76, 93, 124, 180, 226, 290 |
| MluCI | AATT | 2 cut(s) | 67, 265 |
| MlyI | GAGTC | 1 cut(s) | 227 |
| MmeI | TCCRAC | 2 cut(s) | 118, 423 |
| MnlI | CCTC | 9 cut(s) | 109, 115, 118, 134, 193, 242, 333, 362, 399 |
| MroXI | GAANNNNTTC | 1 cut(s) | 363 |
| MseI | TTAA | 1 cut(s) | 264 |
| MslI | CAYNNNNRTG | 1 cut(s) | 209 |
| MspR9I | CCNGG | 1 cut(s) | 290 |
| MvaI | CCWGG | 1 cut(s) | 290 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 293, 302, 331 |
| NcoI | CCATGG | 1 cut(s) | 306 |
| NlaIII | CATG | 3 cut(s) | 153, 310, 380 |
| NlaIV | GGNNCC | 1 cut(s) | 387 |
| NmuCI | GTSAC | 1 cut(s) | 202 |
| NspI | RCATGY | 1 cut(s) | 380 |
| OliI | CACNNNNGTG | 1 cut(s) | 209 |
| PciI | ACATGT | 1 cut(s) | 376 |
| PciSI | GCTCTTC | 1 cut(s) | 137 |
| PdmI | GAANNNNTTC | 1 cut(s) | 363 |
| PleI | GAGTC | 1 cut(s) | 227 |
| PpsI | GAGTC | 1 cut(s) | 227 |
| PscI | ACATGT | 1 cut(s) | 376 |
| Psp6I | CCWGG | 1 cut(s) | 288 |
| PspFI | CCCAGC | 1 cut(s) | 325 |
| PspGI | CCWGG | 1 cut(s) | 288 |
| PspN4I | GGNNCC | 1 cut(s) | 387 |
| PspPI | GGNCC | 1 cut(s) | 116 |
| RseI | CAYNNNNRTG | 1 cut(s) | 209 |
| SapI | GCTCTTC | 1 cut(s) | 137 |
| SaqAI | TTAA | 1 cut(s) | 264 |
| Sau96I | GGNCC | 1 cut(s) | 116 |
| SchI | GAGTC | 1 cut(s) | 227 |
| ScrFI | CCNGG | 1 cut(s) | 290 |
| SetI | ASST | 5 cut(s) | 76, 132, 204, 245, 294 |
| SfaNI | GCATC | 3 cut(s) | 274, 292, 400 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 209 |
| Sse9I | AATT | 2 cut(s) | 67, 265 |
| SsiI | CCGC | 2 cut(s) | 79, 372 |
| SspMI | CTAG | 3 cut(s) | 33, 246, 356 |
| StyD4I | CCNGG | 1 cut(s) | 288 |
| StyI | CCWWGG | 2 cut(s) | 273, 306 |
| TaaI | ACNGT | 2 cut(s) | 404, 419 |
| TaiI | ACGT | 1 cut(s) | 76 |
| TaqI | TCGA | 3 cut(s) | 44, 155, 367 |
| TasI | AATT | 2 cut(s) | 67, 265 |
| Tru1I | TTAA | 1 cut(s) | 264 |
| Tru9I | TTAA | 1 cut(s) | 264 |
| TscAI | CASTG | 2 cut(s) | 211, 409 |
| TseFI | GTSAC | 1 cut(s) | 202 |
| Tsp45I | GTSAC | 1 cut(s) | 202 |
| TspRI | CASTG | 2 cut(s) | 211, 409 |
| XapI | RAATTY | 1 cut(s) | 67 |
| XbaI | TCTAGA | 3 cut(s) | 32, 245, 355 |
| XceI | RCATGY | 1 cut(s) | 380 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 72 |
| XmnI | GAANNNNTTC | 1 cut(s) | 363 |
| XspI | CTAG | 3 cut(s) | 33, 246, 356 |