Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0004171

Physical Location & Seq

Genomic Coordinates Forward (+)

24595801 .. 24602258

Gene Structure 6458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G259400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3087 bp

ATGGCGACCCCGAAACCCCAGAGGTCCCGGGAGGAGTTGGAGGACATAGTCCTCCGGAAAATCTTTCTCGTATCGCTGACCGATTCCTCCGAATCCGATTCCCGAATCGTTTACTTGGAGATGACTGCAGCAGAGATTCTGAGCGAGGGCAAAGAGTTGAGGCTCACTCGGGACCTCATGGAATCGATTCTAATTGATCGGCTTTCGGGCGATTTTGCCTCTGCTGAACCGCCTTTCCAGTACCTCATCGGGTGCTACAAACGGGCTTATGACGAGGGTAAGAAGATCGCTGCCATGAAAGATAAGAACTTGAGGTCTGAATTGGAATCTGTGGTTAGACAAGCCAAGAAGCTATCGGTTTCGTATTGTAGGATTCATTTGGGGAACCCGGATTCGTTTTCCAACCCGAATAAGTCAAATGCGTCGCCTTTATTGCCCTTGATTTTTTCAGAGGGTGGGGGCTCAGTTGATGGGTTTGGAGTTAGTGGTAGTGGTGGGGGAATCCAGTGCCCACCTGGGTTTTTGGATGAGTTCTTCACGGACCCCGATTTCGATAGCTTGGACCCGATTTTGAAAGGGTTGTATGAGGAGCTTAGGGAGATTGTGCTTAAGGTTTCGGCCCTCGGAAACTTCCAGCAGCCATTGAGGGCTCTGTATTTTTTGGTTAAGTTACCAGTTGGTGCAAGGTCTCTTGTCAATCACCCTTGGTGGATTCCCAAAGGGGTATACTTGAATGGGCGAGTTATTGAAAGGACTAGCATTTTAGGTCCTTTCTTCCATGTCAGTGCTCTGCCGGATCATCCAATTTTCAAGAGCCAGCCTGATGTCGGGCAGCAGTGCTTTTCAGAAGCTTCAACTCGGCGACCAGCTGATCTGCTCTCCTCATTCACCACAATTAAGACAGTCATGAATAATTTATATGATGGCCTTGCCGAAGTTCTTCTCTTACTTCTGAAAAATGCAGACACCCGTGAGAATGTTCTTGAGTATCTTGCAGAGGTGATCAATAAAAACTCATCAAGGGCTCATATTCAGGTGGATCCTCTTTCATGTGCAAGTTCAGGCATGTTTGTCAATCTCAGTGCTGTCATGCTTCGTCTTTGTGAGCCGTTTTTAGATGCAAACTTAACAAAAAGGGACAAAATTGATCCAAAATATGTATTTTACAGTAACCGTCTGGAGTTAAGAGGGTTGACTGCGCTACATGCATCATCTGAAGAAGTTACTGAATGGATTAACAAAGATAATATGGGGAATCCTGATGGCTCTAGACACAGTGGTGATGGTGAAAATCGCCTTTTACAATCTCAAGAAGCCACCAGTTCTGGAAATAGTGTCAACGTGAACCCAAGCAATGAAAAAGCTAAATATTCATTTATTTGTGAATGCTTCTTCATGACTGCAAGGGTGCTCAATCTGGGTTTGCTGAAAGCATTTTCTGACTTTAAACATTTAGTACAGGATATTTCAAGGTCTGAAGAGACTCTCGCCACACTCAAAAACATGCAAGGCCAGTCATCTTCTCCACAGTTAGAGATGGATTTAGCTCGCCTTGAGAAAGAAATAGAGTTGTATTCACAGGAAAAGCTTTGTTATGAAGCTCAGATACTAAGGGATGGTACACTTATACAGAGTGCTCTTTCTTTCTACCGATTGATGGTGGTGTGGCTAGTTCGCTTGGTTGGTGGATTTAAAATGCCTCTGCCCTTAACTTGCCCTACGGAGTTTGCTTCTATGCCAGAGCATTTTGTGGAAGATGCCATGGAATTGCTTATATTTGCTTCCCGGATTCCCAAAGCTTTGGATGGAGTCTTGTTGGATGATTTTATGAACTTCATTATAATGTTCATGGCAAGTCCAGAATATATCAGGAACCCTTATCTAAGAGCAAAGATGGTTGAGGTCCTGAACTGCTGGATGCCTCGCAGAAGTGGATCATCTATTACTTCTACCCTATTTGAAGGGCACCAACTGTCTCTTGAGTATCTCGTGAGGAATCTCTTGAAGCTATACGTCGACATCGAGTTCACTGGTTCTCACACACAGTTCTATGACAAGTTTAACATCCGCCACAATATCGCTGAACTTCTTGAATATCTGTGGCAAGTCCCTAGTCATCAAAATGCTTGGAAACAGATTGCTAGGGAAGAGGAGAAGGGCGTTTACTTGAATTTCTTAAACTTCTTGATCAATGATAGCATCTATCTTCTGGATGAAAGTCTTAACAAAATTCTGGAACTCAAAGAACTAGAAGCTGAGATGTCAAACACTGCAGAATGGGAACGCAGGCCTGCTCAAGAGAGGCAGGAGAGGACCCGCCTATTCCATTCTCAAGAGAATATTATCCGAATTGATATGAAGTTGGCAAATGAAGATGTGAGTATGCTGGCATTTACTACAGAACAGATTACAGCTCCTTTCCTACTTCCTGAGATGGTTGAAAGGGTGGCCAGCATGCTCAATTACTTTTTGTTGCAATTAGTAGGCCCTCAAAGAAAGTCTCTTAGTTTGAAAGACCCTGAGAAGTATGAATTCCGGCCAAAGCAATTGCTTAAGCAGATTGTATACATATACGTTCATTTGGCAAAGGGTGATACAGAAAATATTTTTCCAGCTGCCATCTCAAAGGATGGTAGGTCATACAATGAGCAGTTGTTTAGTGCTGCAGCGGATGTCCTAAGGAGAATTGGAGAAGATGGGAGGGTCATACAGGAATTTATTGAGCTTGGTGCCAAAGCCAAAGTTGCTGCTTCTGAGGCCATGGACACGGAAGCTGTTCTCGGGGACATACCAGATGAATTCCTTGATCCAATTCAGTACACTTTAATGAAGGATCCAGTTATCTTGCCTTCTTCAAGAATCACGGTAGACCGACCTGTCATCCAAAGGCATCTTCTTAGTGATAATTCGGATCCGTTCAACCGCTCCCATCTTACGGCGGACATGCTGATACCAGACAATGAATTGAAGGGAAGAATACAAGAGTTCATTAGGTCCCAAGAATTGAAGAAGCGCGGGGAAGACCTAAGCATGCAGAGCAGCAAGGCAACCATACAGACCACAACTAGCGAAATGCTAATTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0030433 GO:0032446 GO:0033554 GO:0034450 GO:0034976 GO:0036211 GO:0036503 GO:0042221 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051603 GO:0051716 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698

KEGG Pathways

Metabolic & Signaling

ko04120 ko04141 map04120 map04141

Pfam Domains

Protein Families

U-box Ufd2P_core

Protein Analysis

1029

Amino Acids

116.67

Weight (kDa)

5.29

Isoelectric Point (pI)

48.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15400
fragaria_vesca	FvH4_3g25920 FvH4_3g25930 FvH4_6g47550 FvH4_6g47550 FvH4_6g47550
malus_domestica	MD09G1060800.v1.1 MD17G1056200.v1.1
prunus_persica	Prupe.3G259400_v2.0.a1
pyrus_communis	pycom111g05110 pycom17g05530
rosa_chinensis	RchiOBHm_Chr2g0166651 RchiOBHm_Chr5g0047221
rosa_laevigata	RLG00000021638 RLG00000034480
rosa_multiflora	Rmu_sc0002310.1_g000029 Rmu_sc0005232.1_g000002
rosa_roxburghii	Rroxscaffold_1G00034160 Rroxscaffold_2G00084330 Rroxscaffold_2G00084640
rosa_rugosa	Rorug02G0524700 Rorug05G0235100
rosa_samantha	Rh2AG590900 Rh2BG602800 Rh2CG573700 Rh2DG613600 Rh5AG314000 Rh5BG322500 Rh5CG349700 Rh5CG349800 Rh5DG333500
rosa_wichuraiana	Rw2G049220 Rw5G029330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1841
AasI	GACNNNNNNGTC	1 cut(s)	2876
AccB1I	GGYRCC	2 cut(s)	1965, 2729
AccBSI	CCGCTC	1 cut(s)	2925
AccI	GTMKAC	4 cut(s)	726, 2016, 2565, 2868
AccII	CGCG	1 cut(s)	3015
AccIII	TCCGGA	1 cut(s)	54
AciI	CCGC	7 cut(s)	230, 2068, 2317, 2669, 2923, 2939, 3015
AcoI	YGGCCR	2 cut(s)	2448, 2537
AcsI	RAATTY	5 cut(s)	2170, 2229, 2531, 2714, 2798
AcuI	CTGAAG	2 cut(s)	1236, 1497
AfaI	GTAC	4 cut(s)	242, 1458, 1621, 2819
AfiI	CCNNNNNNNGG	3 cut(s)	827, 1657, 2935
AflII	CTTAAG	2 cut(s)	608, 2552
AjnI	CCWGG	1 cut(s)	514
AjuI	GAANNNNNNNTTGG	2 cut(s)	2877, 2909
AleI	CACNNNNGTG	1 cut(s)	1278
AloI	GAACNNNNNNTCC	2 cut(s)	219, 251
Alw21I	GWGCWC	3 cut(s)	790, 1413, 1639
Alw26I	GTCTC	4 cut(s)	693, 1475, 1980, 2505
Ama87I	CYCGRG	3 cut(s)	27, 168, 2780
Aor13HI	TCCGGA	1 cut(s)	54
AoxI	GGCC	8 cut(s)	618, 925, 1510, 2288, 2448, 2485, 2537, 2757
ApeKI	GCWGC	9 cut(s)	128, 290, 637, 832, 2615, 2663, 2666, 2747, 3039
ApoI	RAATTY	5 cut(s)	2170, 2229, 2531, 2714, 2798
ArsI	GACNNNNNNTTYG	2 cut(s)	533, 565
Asp700I	GAANNNNTTC	3 cut(s)	186, 939, 2775
AspLEI	GCGC	2 cut(s)	1201, 3015
AsuC2I	CCSGG	4 cut(s)	28, 29, 389, 1786
AsuHPI	GGTGA	6 cut(s)	692, 880, 1012, 1292, 1298, 2603
AvaI	CYCGRG	3 cut(s)	27, 168, 2780
AvaII	GGWCC	8 cut(s)	24, 172, 541, 562, 767, 1903, 2313, 2994
AxyI	CCTNAGG	1 cut(s)	2678
BaeGI	GKGCMC	2 cut(s)	512, 1968
BalI	TGGCCA	1 cut(s)	2450
BamHI	GGATCC	3 cut(s)	1039, 2833, 2911
BanI	GGYRCC	2 cut(s)	1965, 2729
BanII	GRGCYC	3 cut(s)	464, 652, 1027
BarI	GAAGNNNNNNTAC	4 cut(s)	1590, 1622, 2147, 2179
BauI	CACGAG	1 cut(s)	1988
BbsI	GAAGAC	1 cut(s)	3027
Bbv12I	GWGCWC	3 cut(s)	790, 1413, 1639
BbvI	GCAGC	9 cut(s)	140, 277, 649, 844, 2602, 2650, 2678, 2734, 3051
BceAI	ACGGC	2 cut(s)	1093, 2952
BciT130I	CCWGG	1 cut(s)	516
BclI	TGATCA	2 cut(s)	1002, 2187
BcnI	CCSGG	4 cut(s)	28, 29, 389, 1786
BcoDI	GTCTC	4 cut(s)	693, 1475, 1980, 2505
BfaI	CTAG	7 cut(s)	756, 1269, 1670, 2112, 2142, 2249, 3066
BfmI	CTRYAG	4 cut(s)	126, 2271, 2397, 2664
BfrI	CTTAAG	2 cut(s)	608, 2552
BisI	GCNGC	9 cut(s)	129, 291, 638, 833, 2616, 2664, 2667, 2748, 3040
BlsI	GCNGC	9 cut(s)	130, 292, 639, 834, 2617, 2665, 2668, 2749, 3041
Bme1390I	CCNGG	5 cut(s)	28, 29, 389, 516, 1786
Bme18I	GGWCC	8 cut(s)	24, 172, 541, 562, 767, 1903, 2313, 2994
BmeT110I	CYCGRG	3 cut(s)	27, 168, 2780
BmrFI	CCNGG	5 cut(s)	28, 29, 389, 516, 1786
BmsI	GCATC	6 cut(s)	1108, 1217, 1747, 1908, 2208, 2899
BpiI	GAAGAC	1 cut(s)	3027
BplI	GAGNNNNNCTC	2 cut(s)	151, 183
BpmI	CTGGAG	1 cut(s)	1199
Bpu10I	CCTNAGC	2 cut(s)	593, 3026
BpuEI	CTTGAG	7 cut(s)	331, 1004, 1293, 1574, 2000, 2280, 2316
BpuMI	CCSGG	4 cut(s)	28, 29, 389, 1786
Bsa29I	ATCGAT	1 cut(s)	185
BsaI	GGTCTC	1 cut(s)	693
BsaJI	CCNNGG	6 cut(s)	27, 515, 622, 704, 1761, 2760
BsaWI	WCCGGW	1 cut(s)	54
Bsc4I	CCNNNNNNNGG	3 cut(s)	827, 1657, 2935
Bse1I	ACTGG	7 cut(s)	238, 505, 674, 1320, 1513, 2035, 2837
Bse21I	CCTNAGG	1 cut(s)	2678
Bse3DI	GCAATG	1 cut(s)	1360
BseAI	TCCGGA	1 cut(s)	54
BseBI	CCWGG	1 cut(s)	516
BseCI	ATCGAT	1 cut(s)	185
BseDI	CCNNGG	6 cut(s)	27, 515, 622, 704, 1761, 2760
BseLI	CCNNNNNNNGG	3 cut(s)	827, 1657, 2935
BseMI	GCAATG	1 cut(s)	1360
BseMII	CTCAG	8 cut(s)	131, 477, 1093, 1616, 2247, 2421, 2511, 2745
BseNI	ACTGG	7 cut(s)	238, 505, 674, 1320, 1513, 2035, 2837
BseRI	GAGGAG	4 cut(s)	47, 602, 871, 2165
BseSI	GKGCMC	2 cut(s)	512, 1968
BseXI	GCAGC	9 cut(s)	140, 277, 649, 844, 2602, 2650, 2678, 2734, 3051
Bsh1236I	CGCG	1 cut(s)	3015
BshFI	GGCC	8 cut(s)	620, 927, 1512, 2290, 2450, 2487, 2539, 2759
BshNI	GGYRCC	2 cut(s)	1965, 2729
BshVI	ATCGAT	1 cut(s)	185
BsiHKAI	GWGCWC	3 cut(s)	790, 1413, 1639
BsiHKCI	CYCGRG	3 cut(s)	27, 168, 2780
BsiSI	CCGG	6 cut(s)	28, 55, 389, 794, 1786, 2536
BslFI	GGGAC	6 cut(s)	10, 185, 1151, 2093, 2798, 2980
BslI	CCNNNNNNNGG	3 cut(s)	827, 1657, 2935
BsmAI	GTCTC	4 cut(s)	693, 1475, 1980, 2505
BsmFI	GGGAC	6 cut(s)	10, 185, 1151, 2093, 2798, 2980
BsmI	GAATGC	1 cut(s)	1391
BsnI	GGCC	8 cut(s)	620, 927, 1512, 2290, 2450, 2487, 2539, 2759
Bso31I	GGTCTC	1 cut(s)	693
BsoBI	CYCGRG	3 cut(s)	27, 168, 2780
Bsp1286I	GDGCHC	8 cut(s)	464, 512, 652, 790, 1027, 1413, 1639, 1968
Bsp13I	TCCGGA	1 cut(s)	54
Bsp19I	CCATGG	2 cut(s)	1761, 2760
BspACI	CCGC	7 cut(s)	230, 2068, 2317, 2669, 2923, 2939, 3015
BspANI	GGCC	8 cut(s)	620, 927, 1512, 2290, 2450, 2487, 2539, 2759
BspCNI	CTCAG	8 cut(s)	132, 476, 1092, 1615, 2248, 2422, 2512, 2746
BspDI	ATCGAT	1 cut(s)	185
BspEI	TCCGGA	1 cut(s)	54
BspFNI	CGCG	1 cut(s)	3015
BspHI	TCATGA	2 cut(s)	906, 1395
BspMAI	CTGCAG	3 cut(s)	130, 2275, 2668
BspT107I	GGYRCC	2 cut(s)	1965, 2729
BspTI	CTTAAG	2 cut(s)	608, 2552
BspTNI	GGTCTC	1 cut(s)	693
BsrBI	CCGCTC	1 cut(s)	2925
BsrDI	GCAATG	1 cut(s)	1360
BsrI	ACTGG	7 cut(s)	238, 505, 674, 1320, 1513, 2035, 2837
BssECI	CCNNGG	6 cut(s)	27, 515, 622, 704, 1761, 2760
BssNAI	GTATAC	2 cut(s)	727, 2566
BssSI	CACGAG	1 cut(s)	1988
BssT1I	CCWWGG	3 cut(s)	704, 1761, 2760
Bst1107I	GTATAC	2 cut(s)	727, 2566
Bst2BI	CACGAG	1 cut(s)	1988
Bst2UI	CCWGG	1 cut(s)	516
Bst4CI	ACNGT	8 cut(s)	904, 1169, 1175, 1277, 1530, 1974, 2046, 2866
Bst6I	CTCTTC	2 cut(s)	1473, 2142
BstAFI	CTTAAG	2 cut(s)	608, 2552
BstC8I	GCNNGC	8 cut(s)	818, 1549, 2288, 2292, 2388, 2452, 2456, 3032
BstDSI	CCRYGG	2 cut(s)	1761, 2760
BstFNI	CGCG	1 cut(s)	3015
BstHHI	GCGC	2 cut(s)	1201, 3015
BstMAI	GTCTC	4 cut(s)	693, 1475, 1980, 2505
BstMWI	GCNNNNNNNGC	5 cut(s)	433, 1205, 2744, 2756, 3036
BstNI	CCWGG	1 cut(s)	516
BstNSI	RCATGY	6 cut(s)	1069, 1208, 1507, 2458, 2947, 3034
BstSCI	CCNGG	5 cut(s)	26, 27, 387, 514, 1784
BstSFI	CTRYAG	4 cut(s)	126, 2271, 2397, 2664
BstSLI	GKGCMC	2 cut(s)	512, 1968
BstUI	CGCG	1 cut(s)	3015
BstV1I	GCAGC	9 cut(s)	140, 277, 649, 844, 2602, 2650, 2678, 2734, 3051
BstV2I	GAAGAC	1 cut(s)	3027
BstX2I	RGATCY	3 cut(s)	1039, 2833, 2911
BstXI	CCANNNNNNTGG	1 cut(s)	1801
BstYI	RGATCY	3 cut(s)	1039, 2833, 2911
BstZ17I	GTATAC	2 cut(s)	727, 2566
Bsu15I	ATCGAT	1 cut(s)	185
Bsu36I	CCTNAGG	1 cut(s)	2678
BsuRI	GGCC	8 cut(s)	620, 927, 1512, 2290, 2450, 2487, 2539, 2759
BsuTUI	ATCGAT	1 cut(s)	185
BtgI	CCRYGG	2 cut(s)	1761, 2760
BtsI	GCAGTG	2 cut(s)	842, 2268
BtsIMutI	CAGTG	7 cut(s)	512, 790, 842, 1087, 1282, 2028, 2268
Cac8I	GCNNGC	8 cut(s)	818, 1549, 2288, 2292, 2388, 2452, 2456, 3032
CciI	TCATGA	2 cut(s)	906, 1395
CfoI	GCGC	2 cut(s)	1201, 3015
Cfr9I	CCCGGG	1 cut(s)	27
ClaI	ATCGAT	1 cut(s)	185
CseI	GACGC	1 cut(s)	411
Csp6I	GTAC	4 cut(s)	241, 1457, 1620, 2818
CviQI	GTAC	4 cut(s)	241, 1457, 1620, 2818
DraI	TTTAAA	2 cut(s)	1447, 1693
DrdI	GACNNNNNNGTC	1 cut(s)	2876
DseDI	GACNNNNNNGTC	1 cut(s)	2876
EaeI	YGGCCR	2 cut(s)	2448, 2537
Eam1104I	CTCTTC	2 cut(s)	1473, 2142
EarI	CTCTTC	2 cut(s)	1473, 2142
EciI	GGCGGA	2 cut(s)	2057, 2954
Eco130I	CCWWGG	3 cut(s)	704, 1761, 2760
Eco147I	AGGCCT	1 cut(s)	2290
Eco24I	GRGCYC	3 cut(s)	464, 652, 1027
Eco31I	GGTCTC	1 cut(s)	693
Eco47I	GGWCC	8 cut(s)	24, 172, 541, 562, 767, 1903, 2313, 2994
Eco57I	CTGAAG	2 cut(s)	1236, 1497
Eco81I	CCTNAGG	1 cut(s)	2678
Eco88I	CYCGRG	3 cut(s)	27, 168, 2780
EcoO109I	RGGNCCY	7 cut(s)	24, 172, 767, 1903, 2313, 2486, 2994
EcoRI	GAATTC	2 cut(s)	2531, 2798
EcoRII	CCWGG	1 cut(s)	514
EcoT14I	CCWWGG	3 cut(s)	704, 1761, 2760
EcoT22I	ATGCAT	1 cut(s)	1210
EcoT38I	GRGCYC	3 cut(s)	464, 652, 1027
ErhI	CCWWGG	3 cut(s)	704, 1761, 2760
FaqI	GGGAC	6 cut(s)	10, 185, 1151, 2093, 2798, 2980
FauI	CCCGC	2 cut(s)	2324, 3008
FbaI	TGATCA	2 cut(s)	1002, 2187
FblI	GTMKAC	4 cut(s)	726, 2016, 2565, 2868
Fnu4HI	GCNGC	9 cut(s)	129, 291, 638, 833, 2616, 2664, 2667, 2748, 3040
FriOI	GRGCYC	3 cut(s)	464, 652, 1027
Fsp4HI	GCNGC	9 cut(s)	129, 291, 638, 833, 2616, 2664, 2667, 2748, 3040
FspBI	CTAG	7 cut(s)	756, 1269, 1670, 2112, 2142, 2249, 3066
GlaI	GCGC	2 cut(s)	1200, 3014
GluI	GCNGC	9 cut(s)	129, 291, 638, 833, 2616, 2664, 2667, 2748, 3040
GsuI	CTGGAG	1 cut(s)	1199
HaeIII	GGCC	8 cut(s)	620, 927, 1512, 2290, 2450, 2487, 2539, 2759
HapII	CCGG	6 cut(s)	28, 55, 389, 794, 1786, 2536
HgaI	GACGC	1 cut(s)	411
HhaI	GCGC	2 cut(s)	1201, 3015
Hin6I	GCGC	2 cut(s)	1199, 3013
HinP1I	GCGC	2 cut(s)	1199, 3013
HincII	GTYRAC	3 cut(s)	1194, 1339, 2017
HindII	GTYRAC	3 cut(s)	1194, 1339, 2017
HindIII	AAGCTT	3 cut(s)	849, 1586, 1797
HpaII	CCGG	6 cut(s)	28, 55, 389, 794, 1786, 2536
HphI	GGTGA	6 cut(s)	692, 880, 1012, 1292, 1298, 2603
Hpy99I	CGWCG	2 cut(s)	427, 2018
HpyAV	CCTTC	5 cut(s)	1955, 2149, 2824, 2859, 2962
HpyCH4III	ACNGT	8 cut(s)	904, 1169, 1175, 1277, 1530, 1974, 2046, 2866
HpyCH4IV	ACGT	3 cut(s)	1341, 2013, 2574
HpyF10VI	GCNNNNNNNGC	5 cut(s)	433, 1205, 2744, 2756, 3036
HpySE526I	ACGT	3 cut(s)	1341, 2013, 2574
HspAI	GCGC	2 cut(s)	1199, 3013
Kpn2I	TCCGGA	1 cut(s)	54
Ksp22I	TGATCA	2 cut(s)	1002, 2187
LmnI	GCTCC	3 cut(s)	589, 2419, 2930
Lsp1109I	GCAGC	9 cut(s)	140, 277, 649, 844, 2602, 2650, 2678, 2734, 3051
LweI	GCATC	6 cut(s)	1108, 1217, 1747, 1908, 2208, 2899
MaeI	CTAG	7 cut(s)	756, 1269, 1670, 2112, 2142, 2249, 3066
MaeII	ACGT	3 cut(s)	1341, 2013, 2574
MaeIII	GTNAC	3 cut(s)	669, 1169, 1222
MbiI	CCGCTC	1 cut(s)	2925
MfeI	CAATTG	1 cut(s)	2546
MflI	RGATCY	3 cut(s)	1039, 2833, 2911
MhlI	GDGCHC	8 cut(s)	464, 512, 652, 790, 1027, 1413, 1639, 1968
MlsI	TGGCCA	1 cut(s)	2450
MluNI	TGGCCA	1 cut(s)	2450
MlyI	GAGTC	2 cut(s)	1477, 1818
MmeI	TCCRAC	3 cut(s)	18, 426, 1797
Mox20I	TGGCCA	1 cut(s)	2450
Mph1103I	ATGCAT	1 cut(s)	1210
MroI	TCCGGA	1 cut(s)	54
MroXI	GAANNNNTTC	3 cut(s)	186, 939, 2775
MscI	TGGCCA	1 cut(s)	2450
MslI	CAYNNNNRTG	5 cut(s)	783, 1278, 1841, 2121, 2825
Msp20I	TGGCCA	1 cut(s)	2450
MspA1I	CMGCKG	3 cut(s)	869, 2615, 2669
MspCI	CTTAAG	2 cut(s)	608, 2552
MspI	CCGG	6 cut(s)	28, 55, 389, 794, 1786, 2536
MspR9I	CCNGG	5 cut(s)	28, 29, 389, 516, 1786
MunI	CAATTG	1 cut(s)	2546
Mva1269I	GAATGC	1 cut(s)	1391
MvaI	CCWGG	1 cut(s)	516
MvnI	CGCG	1 cut(s)	3015
MwoI	GCNNNNNNNGC	5 cut(s)	433, 1205, 2744, 2756, 3036
NciI	CCSGG	4 cut(s)	28, 29, 389, 1786
NcoI	CCATGG	2 cut(s)	1761, 2760
NmeAIII	GCCGAG	1 cut(s)	838
NsiI	ATGCAT	1 cut(s)	1210
NspI	RCATGY	6 cut(s)	1069, 1208, 1507, 2458, 2947, 3034
OliI	CACNNNNGTG	1 cut(s)	1278
PaeI	GCATGC	2 cut(s)	2458, 3034
PagI	TCATGA	2 cut(s)	906, 1395
PceI	AGGCCT	1 cut(s)	2290
PcsI	WCGNNNNNNNCGW	1 cut(s)	2019
PctI	GAATGC	1 cut(s)	1391
PdmI	GAANNNNTTC	3 cut(s)	186, 939, 2775
PflFI	GACNNNGTC	1 cut(s)	47
PfoI	TCCNGGA	1 cut(s)	1784
PkrI	GCNGC	9 cut(s)	130, 292, 639, 834, 2617, 2665, 2668, 2749, 3041
PleI	GAGTC	2 cut(s)	1477, 1817
PpsI	GAGTC	2 cut(s)	1477, 1817
PpuMI	RGGWCCY	6 cut(s)	24, 172, 767, 1903, 2313, 2994
PsiI	TTATAA	1 cut(s)	1841
Psp5II	RGGWCCY	6 cut(s)	24, 172, 767, 1903, 2313, 2994
Psp6I	CCWGG	1 cut(s)	514
PspGI	CCWGG	1 cut(s)	514
PspPPI	RGGWCCY	6 cut(s)	24, 172, 767, 1903, 2313, 2994
PstI	CTGCAG	3 cut(s)	130, 2275, 2668
PsuI	RGATCY	3 cut(s)	1039, 2833, 2911
PsyI	GACNNNGTC	1 cut(s)	47
PvuII	CAGCTG	2 cut(s)	869, 2615
RsaI	GTAC	4 cut(s)	242, 1458, 1621, 2819
RsaNI	GTAC	4 cut(s)	241, 1457, 1620, 2818
RseI	CAYNNNNRTG	5 cut(s)	783, 1278, 1841, 2121, 2825
SalI	GTCGAC	1 cut(s)	2015
SatI	GCNGC	9 cut(s)	129, 291, 638, 833, 2616, 2664, 2667, 2748, 3040
SchI	GAGTC	2 cut(s)	1477, 1818
ScrFI	CCNGG	5 cut(s)	28, 29, 389, 516, 1786
SduI	GDGCHC	8 cut(s)	464, 512, 652, 790, 1027, 1413, 1639, 1968
SfaNI	GCATC	6 cut(s)	1108, 1217, 1747, 1908, 2208, 2899
SfcI	CTRYAG	4 cut(s)	126, 2271, 2397, 2664
SinI	GGWCC	8 cut(s)	24, 172, 541, 562, 767, 1903, 2313, 2994
SmaI	CCCGGG	1 cut(s)	29
SmiMI	CAYNNNNRTG	5 cut(s)	783, 1278, 1841, 2121, 2825
SmlI	CTYRAG	9 cut(s)	310, 608, 983, 1308, 1553, 1979, 2295, 2331, 2552
SmoI	CTYRAG	9 cut(s)	310, 608, 983, 1308, 1553, 1979, 2295, 2331, 2552
SphI	GCATGC	2 cut(s)	2458, 3034
SseBI	AGGCCT	1 cut(s)	2290
SsiI	CCGC	7 cut(s)	230, 2068, 2317, 2669, 2923, 2939, 3015
SspI	AATATT	3 cut(s)	1370, 2341, 2605
SspMI	CTAG	7 cut(s)	756, 1269, 1670, 2112, 2142, 2249, 3066
StuI	AGGCCT	1 cut(s)	2290
StyD4I	CCNGG	5 cut(s)	26, 27, 387, 514, 1784
StyI	CCWWGG	3 cut(s)	704, 1761, 2760
TaaI	ACNGT	8 cut(s)	904, 1169, 1175, 1277, 1530, 1974, 2046, 2866
TaiI	ACGT	3 cut(s)	1344, 2016, 2577
TaqI	TCGA	4 cut(s)	185, 552, 2016, 2022
TaqII	GACCGA	2 cut(s)	95, 2886
TatI	WGTACW	2 cut(s)	1456, 2817
TscAI	CASTG	7 cut(s)	512, 790, 842, 1087, 1282, 2035, 2275
TseI	GCWGC	9 cut(s)	128, 290, 637, 832, 2615, 2663, 2666, 2747, 3039
TspGWI	ACGGA	4 cut(s)	554, 1736, 2783, 2904
TspMI	CCCGGG	1 cut(s)	27
TspRI	CASTG	7 cut(s)	512, 790, 842, 1087, 1282, 2035, 2275
Tth111I	GACNNNGTC	1 cut(s)	47
Vha464I	CTTAAG	2 cut(s)	608, 2552
VpaK11BI	GGWCC	8 cut(s)	24, 172, 541, 562, 767, 1903, 2313, 2994
XapI	RAATTY	5 cut(s)	2170, 2229, 2531, 2714, 2798
XbaI	TCTAGA	1 cut(s)	1268
XceI	RCATGY	6 cut(s)	1069, 1208, 1507, 2458, 2947, 3034
XcmI	CCANNNNNNNNNTGG	1 cut(s)	512
XmaI	CCCGGG	1 cut(s)	27
XmiI	GTMKAC	4 cut(s)	726, 2016, 2565, 2868
XmnI	GAANNNNTTC	3 cut(s)	186, 939, 2775
XspI	CTAG	7 cut(s)	756, 1269, 1670, 2112, 2142, 2249, 3066
Zsp2I	ATGCAT	1 cut(s)	1210

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.