Prupe.3G288100_v2.0.a1

Glutaredoxin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0006282
Physical Location & Seq
Reverse (-)
25955123 .. 25956467
1345 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G288100.1

Sequence Viewer

Length: 324 bp
ATGGCATTGACAAAGGCGAAGGAGATCGTGTCGTCCAATTCGGTCGTCGTGTTCAGCAAGACGTATTGCCCCTACTGCGTGAGCGTGAAGCAGCTCTTGACTCAGTTGGGAGCTAAATTCAAGGCCATTGAGCTGGACACTGAGAGTGATGGAGCTCAGATACAATCAGCACTGGGTGAGTGGTCTGGCCAGCGGACTGTACCCAATGTGTTCATTGGTGGAAACCACATTGGTGGATGTGATACAACAACTGCCTTGCACAAGGAAGGAAAACTGGTGCCTCTATTGTCTGAAGCTGGAGCTGTTGCCAAAACTCCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

108

Amino Acids

11.22

Weight (kDa)

7.71

Isoelectric Point (pI)

34.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 277
AciI CCGC 1 cut(s) 193
AcoI YGGCCR 1 cut(s) 187
AcsI RAATTY 1 cut(s) 116
AcuI CTGAAG 1 cut(s) 312
AdeI CACNNNGTG 1 cut(s) 176
AfaI GTAC 1 cut(s) 201
AgsI TTSAA 1 cut(s) 121
AleI CACNNNNGTG 1 cut(s) 231
AluBI AGCT 6 cut(s) 94, 113, 133, 155, 296, 302
AluI AGCT 6 cut(s) 94, 113, 133, 155, 296, 302
Alw21I GWGCWC 1 cut(s) 157
AoxI GGCC 2 cut(s) 123, 187
ApeKI GCWGC 1 cut(s) 91
ApoI RAATTY 1 cut(s) 116
AsuHPI GGTGA 1 cut(s) 188
BalI TGGCCA 1 cut(s) 189
BanI GGYRCC 1 cut(s) 277
BanII GRGCYC 1 cut(s) 157
Bbv12I GWGCWC 1 cut(s) 157
BbvI GCAGC 1 cut(s) 103
BccI CCATC 1 cut(s) 143
BisI GCNGC 1 cut(s) 92
BlsI GCNGC 1 cut(s) 93
BmiI GGNNCC 1 cut(s) 279
BmrI ACTGGG 1 cut(s) 182
BmuI ACTGGG 1 cut(s) 182
BpmI CTGGAG 1 cut(s) 318
BsaXI ACNNNNNCTCC 2 cut(s) 14, 44
Bse1I ACTGG 2 cut(s) 177, 279
BseGI GGATG 1 cut(s) 242
BseMII CTCAG 3 cut(s) 116, 132, 170
BseNI ACTGG 2 cut(s) 177, 279
BseXI GCAGC 1 cut(s) 103
Bsh1285I CGRYCG 1 cut(s) 45
BshFI GGCC 2 cut(s) 125, 189
BshNI GGYRCC 1 cut(s) 277
BsiEI CGRYCG 1 cut(s) 45
BsiHKAI GWGCWC 1 cut(s) 157
BsnI GGCC 2 cut(s) 125, 189
Bsp1286I GDGCHC 1 cut(s) 157
Bsp143I GATC 1 cut(s) 24
BspACI CCGC 1 cut(s) 193
BspANI GGCC 2 cut(s) 125, 189
BspCNI CTCAG 3 cut(s) 115, 133, 169
BspLI GGNNCC 1 cut(s) 279
BspT107I GGYRCC 1 cut(s) 277
BsrI ACTGG 2 cut(s) 177, 279
BssMI GATC 1 cut(s) 24
Bst4CI ACNGT 1 cut(s) 199
BstC8I GCNNGC 1 cut(s) 191
BstDEI CTNAG 3 cut(s) 102, 141, 156
BstF5I GGATG 1 cut(s) 242
BstKTI GATC 1 cut(s) 27
BstMBI GATC 1 cut(s) 24
BstMCI CGRYCG 1 cut(s) 45
BstMWI GCNNNNNNNGC 1 cut(s) 75
BstV1I GCAGC 1 cut(s) 103
BstXI CCANNNNNNTGG 2 cut(s) 133, 233
BsuRI GGCC 2 cut(s) 125, 189
BtsCI GGATG 1 cut(s) 242
BtsIMutI CAGTG 2 cut(s) 138, 170
Cac8I GCNNGC 1 cut(s) 191
Csp6I GTAC 1 cut(s) 200
CviJI RGCY 8 cut(s) 94, 113, 125, 133, 155, 189, 296, 302
CviKI_1 RGCY 8 cut(s) 94, 113, 125, 133, 155, 189, 296, 302
CviQI GTAC 1 cut(s) 200
DdeI CTNAG 3 cut(s) 102, 141, 156
DpnI GATC 1 cut(s) 26
DpnII GATC 1 cut(s) 24
DraIII CACNNNGTG 1 cut(s) 176
EaeI YGGCCR 1 cut(s) 187
Ecl136II GAGCTC 1 cut(s) 155
Eco24I GRGCYC 1 cut(s) 157
Eco53kI GAGCTC 1 cut(s) 155
Eco57I CTGAAG 1 cut(s) 312
EcoICRI GAGCTC 1 cut(s) 155
EcoT38I GRGCYC 1 cut(s) 157
FalI AAGNNNNNCTT 2 cut(s) 80, 112
Fnu4HI GCNGC 1 cut(s) 92
FokI GGATG 1 cut(s) 249
FriOI GRGCYC 1 cut(s) 157
Fsp4HI GCNGC 1 cut(s) 92
GluI GCNGC 1 cut(s) 92
GsuI CTGGAG 1 cut(s) 318
HaeIII GGCC 2 cut(s) 125, 189
HinfI GANTC 1 cut(s) 100
HphI GGTGA 1 cut(s) 188
Hpy188I TCNGA 2 cut(s) 159, 292
Hpy188III TCNNGA 1 cut(s) 97
Hpy99I CGWCG 1 cut(s) 50
HpyAV CCTTC 2 cut(s) 13, 260
HpyCH4III ACNGT 1 cut(s) 199
HpyCH4IV ACGT 1 cut(s) 62
HpyCH4V TGCA 1 cut(s) 259
HpyF10VI GCNNNNNNNGC 1 cut(s) 75
HpyF3I CTNAG 3 cut(s) 102, 141, 156
HpySE526I ACGT 1 cut(s) 62
Kzo9I GATC 1 cut(s) 24
LmnI GCTCC 3 cut(s) 110, 152, 299
LpnPI CCDG 6 cut(s) 119, 158, 171, 203, 260, 282
Lsp1109I GCAGC 1 cut(s) 103
MaeII ACGT 1 cut(s) 62
MalI GATC 1 cut(s) 26
MboI GATC 1 cut(s) 24
MhlI GDGCHC 1 cut(s) 157
MlsI TGGCCA 1 cut(s) 189
MluCI AATT 2 cut(s) 37, 116
MluNI TGGCCA 1 cut(s) 189
MlyI GAGTC 1 cut(s) 94
MnlI CCTC 1 cut(s) 291
Mox20I TGGCCA 1 cut(s) 189
MscI TGGCCA 1 cut(s) 189
MseI TTAA 1 cut(s) 322
MslI CAYNNNNRTG 1 cut(s) 231
Msp20I TGGCCA 1 cut(s) 189
MspA1I CMGCKG 1 cut(s) 193
MwoI GCNNNNNNNGC 1 cut(s) 75
NdeII GATC 1 cut(s) 24
NlaIV GGNNCC 1 cut(s) 279
OliI CACNNNNGTG 1 cut(s) 231
PkrI GCNGC 1 cut(s) 93
PleI GAGTC 1 cut(s) 94
PpsI GAGTC 1 cut(s) 94
Psp124BI GAGCTC 1 cut(s) 157
PspN4I GGNNCC 1 cut(s) 279
RsaI GTAC 1 cut(s) 201
RsaNI GTAC 1 cut(s) 200
RseI CAYNNNNRTG 1 cut(s) 231
SacI GAGCTC 1 cut(s) 157
SaqAI TTAA 1 cut(s) 322
SatI GCNGC 1 cut(s) 92
Sau3AI GATC 1 cut(s) 24
SchI GAGTC 1 cut(s) 94
SduI GDGCHC 1 cut(s) 157
SetI ASST 7 cut(s) 65, 96, 115, 135, 157, 298, 304
SmiMI CAYNNNNRTG 1 cut(s) 231
Sse9I AATT 2 cut(s) 37, 116
SsiI CCGC 1 cut(s) 193
SstI GAGCTC 1 cut(s) 157
TaaI ACNGT 1 cut(s) 199
TaiI ACGT 1 cut(s) 65
TaqII GACCGA 1 cut(s) 31
TasI AATT 2 cut(s) 37, 116
Tru1I TTAA 1 cut(s) 322
Tru9I TTAA 1 cut(s) 322
TscAI CASTG 2 cut(s) 145, 177
TseI GCWGC 1 cut(s) 91
TspDTI ATGAA 1 cut(s) 202
TspRI CASTG 2 cut(s) 145, 177
XapI RAATTY 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.