Rh2CG616300

Glutaredoxin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0006282
Physical Location & Seq
Reverse (-)
79228636 .. 79230119
1484 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG616300.1

Sequence Viewer

Length: 186 bp
ATGAAGTGTGATGGAAGTCAGCTACAAGCAGCACTGGCTGAGCTGACTGGACAGAGGACTGTGCCGAATGTGTTCATCGGTGGAAACCACATCGGTGGATGTGACGCAACTACGGCCCTGCACAAGGAAGGAAAGCTGGCTCCTCTGCTCACTCAAGCCGGAGCTGTTGCCAAATCCTCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

61

Amino Acids

6.12

Weight (kDa)

7.84

Isoelectric Point (pI)

41.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glutaredoxin PF00462 6 - 31 9.5e-07 Glutaredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 124
AleI CACNNNNGTG 1 cut(s) 93
AluBI AGCT 4 cut(s) 22, 43, 136, 164
AluI AGCT 4 cut(s) 22, 43, 136, 164
AoxI GGCC 1 cut(s) 114
ApeKI GCWGC 1 cut(s) 29
Asp700I GAANNNNTTC 1 cut(s) 71
AspS9I GGNCC 1 cut(s) 115
BbvI GCAGC 1 cut(s) 41
BccI CCATC 1 cut(s) 5
BceAI ACGGC 1 cut(s) 129
BisI GCNGC 1 cut(s) 30
BlpI GCTNAGC 1 cut(s) 39
BlsI GCNGC 1 cut(s) 31
BmgT120I GGNCC 1 cut(s) 115
BmiI GGNNCC 1 cut(s) 141
Bpu1102I GCTNAGC 1 cut(s) 39
BpuEI CTTGAG 1 cut(s) 138
Bsc4I CCNNNNNNNGG 1 cut(s) 124
Bse1I ACTGG 2 cut(s) 39, 52
BseGI GGATG 1 cut(s) 104
BseLI CCNNNNNNNGG 1 cut(s) 124
BseMII CTCAG 1 cut(s) 30
BseNI ACTGG 2 cut(s) 39, 52
BseRI GAGGAG 1 cut(s) 132
BseXI GCAGC 1 cut(s) 41
BsgI GTGCAG 1 cut(s) 104
BshFI GGCC 1 cut(s) 116
BsiSI CCGG 1 cut(s) 159
BslI CCNNNNNNNGG 1 cut(s) 124
BsnI GGCC 1 cut(s) 116
Bsp1720I GCTNAGC 1 cut(s) 39
BspANI GGCC 1 cut(s) 116
BspCNI CTCAG 1 cut(s) 31
BspLI GGNNCC 1 cut(s) 141
BsrI ACTGG 2 cut(s) 39, 52
Bst4CI ACNGT 1 cut(s) 61
BstC8I GCNNGC 1 cut(s) 138
BstDEI CTNAG 1 cut(s) 39
BstENI CCTNNNNNAGG 1 cut(s) 122
BstF5I GGATG 1 cut(s) 104
BstMWI GCNNNNNNNGC 2 cut(s) 35, 113
BstV1I GCAGC 1 cut(s) 41
BstXI CCANNNNNNTGG 1 cut(s) 95
BsuRI GGCC 1 cut(s) 116
BtsCI GGATG 1 cut(s) 104
BtsIMutI CAGTG 1 cut(s) 32
Cac8I GCNNGC 1 cut(s) 138
Cfr13I GGNCC 1 cut(s) 115
CseI GACGC 1 cut(s) 113
CviJI RGCY 8 cut(s) 22, 38, 43, 116, 136, 140, 158, 164
CviKI_1 RGCY 8 cut(s) 22, 38, 43, 116, 136, 140, 158, 164
DdeI CTNAG 1 cut(s) 39
EcoNI CCTNNNNNAGG 1 cut(s) 122
Fnu4HI GCNGC 1 cut(s) 30
FokI GGATG 1 cut(s) 111
Fsp4HI GCNGC 1 cut(s) 30
GluI GCNGC 1 cut(s) 30
HaeIII GGCC 1 cut(s) 116
HapII CCGG 1 cut(s) 159
HgaI GACGC 1 cut(s) 113
HpaII CCGG 1 cut(s) 159
HpyAV CCTTC 1 cut(s) 122
HpyCH4III ACNGT 1 cut(s) 61
HpyCH4V TGCA 1 cut(s) 121
HpyF10VI GCNNNNNNNGC 2 cut(s) 35, 113
HpyF3I CTNAG 1 cut(s) 39
LmnI GCTCC 2 cut(s) 145, 161
LpnPI CCDG 5 cut(s) 20, 33, 122, 131, 172
Lsp1109I GCAGC 1 cut(s) 41
MaeIII GTNAC 1 cut(s) 101
MnlI CCTC 2 cut(s) 48, 153
MroXI GAANNNNTTC 1 cut(s) 71
MseI TTAA 1 cut(s) 184
MslI CAYNNNNRTG 1 cut(s) 93
MspI CCGG 1 cut(s) 159
MwoI GCNNNNNNNGC 2 cut(s) 35, 113
NlaIV GGNNCC 1 cut(s) 141
NmuCI GTSAC 1 cut(s) 101
OliI CACNNNNGTG 1 cut(s) 93
PdmI GAANNNNTTC 1 cut(s) 71
PkrI GCNGC 1 cut(s) 31
PspN4I GGNNCC 1 cut(s) 141
PspPI GGNCC 1 cut(s) 115
RseI CAYNNNNRTG 1 cut(s) 93
SaqAI TTAA 1 cut(s) 184
SatI GCNGC 1 cut(s) 30
Sau96I GGNCC 1 cut(s) 115
SetI ASST 4 cut(s) 24, 45, 138, 166
SgeI CNNG 8 cut(s) 38, 47, 60, 130, 136, 149, 167, 171
SmiMI CAYNNNNRTG 1 cut(s) 93
SmlI CTYRAG 1 cut(s) 153
SmoI CTYRAG 1 cut(s) 153
TaaI ACNGT 1 cut(s) 61
Tru1I TTAA 1 cut(s) 184
Tru9I TTAA 1 cut(s) 184
TscAI CASTG 1 cut(s) 39
TseFI GTSAC 1 cut(s) 101
TseI GCWGC 1 cut(s) 29
Tsp45I GTSAC 1 cut(s) 101
TspDTI ATGAA 2 cut(s) 17, 64
TspRI CASTG 1 cut(s) 39
XagI CCTNNNNNAGG 1 cut(s) 122
XmnI GAANNNNTTC 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.