Prupe.4G014700_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
681114 .. 682671
1558 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G014700.1

Sequence Viewer

Length: 1035 bp
ATGGAAGAAAGCCCCAAATTCAAACCACAAACCTTCTCGCAGAGCAGCAGTCGAAGAAGACGAACCATCACCGACTCTAACTCGCCCGAGTTCGAGTTCTGGATGGTCCGGAATCCCTCCTGCCCTCAACCCAATCTCCTCTCCGCTGACGAACTCTTTGTTGATGGCGTGCTCCTCCCTCTCCACCTCCTCCCCAACCAACCCGACCCACCTGACCCAAATCCACAACCTATCTCAGAACAGCCTGTTCCAGACTCAGAAACCGTCTCAGAACCAGCTGTTCCGGACCCAGAACCGGAACCCAGCCCAGGACCCGAGCTGTCAACCGCTCCAGTACTAACCGCATCGAAGCGTTGGAGGGACATTTTTAAGAAGGGCGAGAAGAAAACCGTCAAAGGTGAGGAGAATGATAAAGAGAAAGACAAGAAGAAAGAGCGAAAGGGTGGAACCGGAGCGAGCTCGGCCGAGTTGAACATCAATATATGGCCTTTTTCACGCAGTAGATCCGCCGGAAACGCGTATACCCGACCCAAACCACCATTCGGATCCCCCGCAACCCGGAAGGTGAACAGCGCGCCGTGTTCAAGGAGCAACTCGACGGGCGAGTCAAAGTCGAGAAAATGGCCTCCTGCAAGTCCGGGTCGGCCCGGAGTCCATTTGGGTCGCAGCAGCCCGGTTTGGCAGGTACGGCGCGGGAGCTCGGTGGCGGTAAAGAGCAGCTTGGAACCACATGTTCGGAATGCTGAAAAGGGTACCAAAAAGGAAGTGCCCGAGAGTCGCCGGAGTAAAAATACCACCGTTGTCGCCGGCGCGGGTGGTGCGAAAGGCAGGGTCTTGAATTTGAATGTTCCGATGTGCATTGGGTACAGAAGCCATTTGAGTTGTAGAAGCGACGAGAATAGTGCTGTAGGTGTGGCCGGCGGTGGAGGCAGTGGCAGCAGAAACCGCGGTGGTGGCGGTGGTCACGGTGGAGATAGTGGCGTCGGTGGTAATCTTTTTAATCTGCGCAGCCTTTTCACTAAGAAGGTGTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

345

Amino Acids

36.95

Weight (kDa)

9.92

Isoelectric Point (pI)

76.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 604
Acc16I TGCGCA 1 cut(s) 1007
Acc36I ACCTGC 1 cut(s) 673
Acc65I GGTACC 1 cut(s) 752
AccB1I GGYRCC 1 cut(s) 752
AccBSI CCGCTC 1 cut(s) 329
AccI GTMKAC 1 cut(s) 521
AccII CGCG 5 cut(s) 518, 575, 693, 812, 948
AccIII TCCGGA 2 cut(s) 108, 283
AclWI GGATC 3 cut(s) 498, 540, 553
AcoI YGGCCR 2 cut(s) 462, 915
AcsI RAATTY 2 cut(s) 17, 838
AcyI GRCGYC 1 cut(s) 981
AfaI GTAC 4 cut(s) 336, 687, 754, 866
AfiI CCNNNNNNNGG 4 cut(s) 295, 308, 542, 558
AflIII ACRYGT 2 cut(s) 516, 730
AgsI TTSAA 5 cut(s) 22, 472, 585, 838, 844
AjnI CCWGG 1 cut(s) 307
AjuI GAANNNNNNNTTGG 2 cut(s) 524, 556
AluBI AGCT 5 cut(s) 278, 319, 459, 699, 720
AluI AGCT 5 cut(s) 278, 319, 459, 699, 720
Alw21I GWGCWC 3 cut(s) 174, 461, 701
Alw26I GTCTC 1 cut(s) 271
AlwI GGATC 3 cut(s) 498, 540, 553
Ama87I CYCGRG 3 cut(s) 86, 314, 770
Aor13HI TCCGGA 2 cut(s) 108, 283
AoxI GGCC 5 cut(s) 462, 485, 623, 644, 915
ApeKI GCWGC 6 cut(s) 45, 666, 669, 717, 936, 1008
ApoI RAATTY 2 cut(s) 17, 838
ArsI GACNNNNNNTTYG 2 cut(s) 140, 172
Asp718I GGTACC 1 cut(s) 752
AspLEI GCGC 5 cut(s) 575, 577, 693, 812, 1008
AspS9I GGNCC 4 cut(s) 106, 286, 311, 645
AsuC2I CCSGG 4 cut(s) 559, 639, 648, 674
AsuHPI GGTGA 3 cut(s) 61, 410, 577
AvaI CYCGRG 3 cut(s) 86, 314, 770
AvaII GGWCC 3 cut(s) 106, 286, 311
BaeGI GKGCMC 1 cut(s) 771
BamHI GGATCC 1 cut(s) 545
BanI GGYRCC 1 cut(s) 752
BanII GRGCYC 2 cut(s) 461, 701
BbsI GAAGAC 1 cut(s) 64
Bbv12I GWGCWC 3 cut(s) 174, 461, 701
BbvI GCAGC 6 cut(s) 57, 678, 681, 729, 948, 1020
BccI CCATC 3 cut(s) 74, 97, 158
BceAI ACGGC 2 cut(s) 562, 704
BcgI CGANNNNNNTGC 2 cut(s) 884, 918
BciT130I CCWGG 1 cut(s) 309
BcnI CCSGG 4 cut(s) 559, 639, 648, 674
BcoDI GTCTC 1 cut(s) 271
BfmI CTRYAG 1 cut(s) 906
BfuAI ACCTGC 1 cut(s) 673
BisI GCNGC 6 cut(s) 46, 667, 670, 718, 937, 1009
BlsI GCNGC 6 cut(s) 47, 668, 671, 719, 938, 1010
BmcAI AGTACT 1 cut(s) 336
Bme1390I CCNGG 5 cut(s) 309, 559, 639, 648, 674
Bme18I GGWCC 3 cut(s) 106, 286, 311
BmeT110I CYCGRG 3 cut(s) 86, 314, 770
BmgT120I GGNCC 4 cut(s) 106, 286, 311, 645
BmiI GGNNCC 7 cut(s) 288, 300, 313, 448, 547, 726, 754
BmrFI CCNGG 5 cut(s) 309, 559, 639, 648, 674
BmsI GCATC 1 cut(s) 353
BpiI GAAGAC 1 cut(s) 64
BpmI CTGGAG 1 cut(s) 315
BpuMI CCSGG 4 cut(s) 559, 639, 648, 674
BsaHI GRCGYC 1 cut(s) 981
BsaJI CCNNGG 2 cut(s) 307, 946
BsaWI WCCGGW 4 cut(s) 108, 283, 295, 449
BsaXI ACNNNNNCTCC 2 cut(s) 120, 150
Bsc4I CCNNNNNNNGG 4 cut(s) 295, 308, 542, 558
Bse118I RCCGGY 2 cut(s) 806, 917
Bse1I ACTGG 1 cut(s) 332
BseAI TCCGGA 2 cut(s) 108, 283
BseBI CCWGG 1 cut(s) 309
BseDI CCNNGG 2 cut(s) 307, 946
BseGI GGATG 1 cut(s) 108
BseLI CCNNNNNNNGG 4 cut(s) 295, 308, 542, 558
BseMII CTCAG 3 cut(s) 249, 270, 282
BseNI ACTGG 1 cut(s) 332
BsePI GCGCGC 1 cut(s) 573
BseRI GAGGAG 4 cut(s) 128, 164, 179, 416
BseSI GKGCMC 1 cut(s) 771
BseX3I CGGCCG 1 cut(s) 462
BseXI GCAGC 6 cut(s) 57, 678, 681, 729, 948, 1020
BseYI CCCAGC 1 cut(s) 302
Bsh1236I CGCG 5 cut(s) 518, 575, 693, 812, 948
Bsh1285I CGRYCG 1 cut(s) 465
BshFI GGCC 5 cut(s) 464, 487, 625, 646, 917
BshNI GGYRCC 1 cut(s) 752
BsiEI CGRYCG 1 cut(s) 465
BsiHKAI GWGCWC 3 cut(s) 174, 461, 701
BsiHKCI CYCGRG 3 cut(s) 86, 314, 770
BslFI GGGAC 1 cut(s) 374
BslI CCNNNNNNNGG 4 cut(s) 295, 308, 542, 558
BsmAI GTCTC 1 cut(s) 271
BsmBI CGTCTC 1 cut(s) 271
BsmFI GGGAC 1 cut(s) 374
BsmI GAATGC 1 cut(s) 745
BsnI GGCC 5 cut(s) 464, 487, 625, 646, 917
BsoBI CYCGRG 3 cut(s) 86, 314, 770
Bsp1286I GDGCHC 4 cut(s) 174, 461, 701, 771
Bsp13I TCCGGA 2 cut(s) 108, 283
Bsp143I GATC 2 cut(s) 503, 545
BspANI GGCC 5 cut(s) 464, 487, 625, 646, 917
BspCNI CTCAG 3 cut(s) 248, 269, 281
BspEI TCCGGA 2 cut(s) 108, 283
BspFNI CGCG 5 cut(s) 518, 575, 693, 812, 948
BspLI GGNNCC 7 cut(s) 288, 300, 313, 448, 547, 726, 754
BspMI ACCTGC 1 cut(s) 673
BspPI GGATC 3 cut(s) 498, 540, 553
BspT107I GGYRCC 1 cut(s) 752
BsrBI CCGCTC 1 cut(s) 329
BsrFI RCCGGY 2 cut(s) 806, 917
BsrI ACTGG 1 cut(s) 332
BssAI RCCGGY 2 cut(s) 806, 917
BssECI CCNNGG 2 cut(s) 307, 946
BssHII GCGCGC 1 cut(s) 573
BssMI GATC 2 cut(s) 503, 545
BssNAI GTATAC 1 cut(s) 522
BssNI GRCGYC 1 cut(s) 981
Bst1107I GTATAC 1 cut(s) 522
Bst2UI CCWGG 1 cut(s) 309
Bst4CI ACNGT 4 cut(s) 265, 391, 799, 968
BstACI GRCGYC 1 cut(s) 981
BstC8I GCNNGC 5 cut(s) 170, 457, 575, 808, 919
BstDEI CTNAG 4 cut(s) 235, 256, 268, 1020
BstDSI CCRYGG 1 cut(s) 946
BstF5I GGATG 1 cut(s) 108
BstFNI CGCG 5 cut(s) 518, 575, 693, 812, 948
BstHHI GCGC 5 cut(s) 575, 577, 693, 812, 1008
BstKTI GATC 2 cut(s) 506, 548
BstMAI GTCTC 1 cut(s) 271
BstMBI GATC 2 cut(s) 503, 545
BstMCI CGRYCG 1 cut(s) 465
BstMWI GCNNNNNNNGC 8 cut(s) 461, 515, 688, 818, 927, 936, 945, 954
BstNI CCWGG 1 cut(s) 309
BstNSI RCATGY 1 cut(s) 734
BstSCI CCNGG 5 cut(s) 307, 557, 637, 646, 672
BstSFI CTRYAG 1 cut(s) 906
BstSLI GKGCMC 1 cut(s) 771
BstUI CGCG 5 cut(s) 518, 575, 693, 812, 948
BstV1I GCAGC 6 cut(s) 57, 678, 681, 729, 948, 1020
BstV2I GAAGAC 1 cut(s) 64
BstX2I RGATCY 2 cut(s) 503, 545
BstYI RGATCY 2 cut(s) 503, 545
BstZ17I GTATAC 1 cut(s) 522
BstZI CGGCCG 1 cut(s) 462
BsuRI GGCC 5 cut(s) 464, 487, 625, 646, 917
BtgI CCRYGG 1 cut(s) 946
BtsCI GGATG 1 cut(s) 108
BtsI GCAGTG 1 cut(s) 937
BtsIMutI CAGTG 1 cut(s) 937
BveI ACCTGC 1 cut(s) 673
Cac8I GCNNGC 5 cut(s) 170, 457, 575, 808, 919
CfoI GCGC 5 cut(s) 575, 577, 693, 812, 1008
Cfr10I RCCGGY 2 cut(s) 806, 917
Cfr13I GGNCC 4 cut(s) 106, 286, 311, 645
Cfr42I CCGCGG 1 cut(s) 949
CseI GACGC 1 cut(s) 970
Csp6I GTAC 4 cut(s) 335, 686, 753, 865
CviAII CATG 1 cut(s) 731
CviQI GTAC 4 cut(s) 335, 686, 753, 865
DdeI CTNAG 4 cut(s) 235, 256, 268, 1020
DpnI GATC 2 cut(s) 505, 547
DpnII GATC 2 cut(s) 503, 545
DrdI GACNNNNNNGTC 1 cut(s) 604
DseDI GACNNNNNNGTC 1 cut(s) 604
EaeI YGGCCR 2 cut(s) 462, 915
EagI CGGCCG 1 cut(s) 462
EciI GGCGGA 1 cut(s) 496
Ecl136II GAGCTC 2 cut(s) 459, 699
EclXI CGGCCG 1 cut(s) 462
Eco24I GRGCYC 2 cut(s) 461, 701
Eco47I GGWCC 3 cut(s) 106, 286, 311
Eco52I CGGCCG 1 cut(s) 462
Eco53kI GAGCTC 2 cut(s) 459, 699
Eco88I CYCGRG 3 cut(s) 86, 314, 770
EcoICRI GAGCTC 2 cut(s) 459, 699
EcoO109I RGGNCCY 1 cut(s) 311
EcoRII CCWGG 1 cut(s) 307
EcoT38I GRGCYC 2 cut(s) 461, 701
Esp3I CGTCTC 1 cut(s) 271
FaeI CATG 1 cut(s) 734
FaiI YATR 4 cut(s) 482, 484, 522, 732
FalI AAGNNNNNCTT 2 cut(s) 704, 736
FaqI GGGAC 1 cut(s) 374
FatI CATG 1 cut(s) 730
FauI CCCGC 3 cut(s) 559, 686, 805
FblI GTMKAC 1 cut(s) 521
Fnu4HI GCNGC 6 cut(s) 46, 667, 670, 718, 937, 1009
FokI GGATG 1 cut(s) 115
FriOI GRGCYC 2 cut(s) 461, 701
Fsp4HI GCNGC 6 cut(s) 46, 667, 670, 718, 937, 1009
FspI TGCGCA 1 cut(s) 1007
GlaI GCGC 5 cut(s) 574, 576, 692, 811, 1007
GluI GCNGC 6 cut(s) 46, 667, 670, 718, 937, 1009
GsaI CCCAGC 1 cut(s) 306
GsuI CTGGAG 1 cut(s) 315
HaeIII GGCC 5 cut(s) 464, 487, 625, 646, 917
HgaI GACGC 1 cut(s) 970
HhaI GCGC 5 cut(s) 575, 577, 693, 812, 1008
Hin1I GRCGYC 1 cut(s) 981
Hin1II CATG 1 cut(s) 734
Hin6I GCGC 5 cut(s) 573, 575, 691, 810, 1006
HinP1I GCGC 5 cut(s) 573, 575, 691, 810, 1006
HincII GTYRAC 1 cut(s) 324
HindII GTYRAC 1 cut(s) 324
HinfI GANTC 6 cut(s) 74, 112, 254, 605, 651, 775
HphI GGTGA 3 cut(s) 61, 410, 577
Hpy166II GTNNAC 3 cut(s) 324, 522, 568
Hpy188I TCNGA 6 cut(s) 238, 259, 271, 545, 738, 852
Hpy188III TCNNGA 6 cut(s) 100, 109, 251, 284, 615, 835
Hpy8I GTNNAC 3 cut(s) 324, 522, 568
Hpy99I CGWCG 3 cut(s) 601, 896, 986
HpyAV CCTTC 4 cut(s) 43, 367, 556, 1018
HpyCH4III ACNGT 4 cut(s) 265, 391, 799, 968
HpyCH4V TGCA 2 cut(s) 632, 858
HpyF10VI GCNNNNNNNGC 8 cut(s) 461, 515, 688, 818, 927, 936, 945, 954
HpyF3I CTNAG 4 cut(s) 235, 256, 268, 1020
Hsp92I GRCGYC 1 cut(s) 981
Hsp92II CATG 1 cut(s) 734
HspAI GCGC 5 cut(s) 573, 575, 691, 810, 1006
Kpn2I TCCGGA 2 cut(s) 108, 283
KpnI GGTACC 1 cut(s) 756
KroI GCCGGC 2 cut(s) 806, 917
KroNI GCCGGC 2 cut(s) 808, 919
KspI CCGCGG 1 cut(s) 949
Kzo9I GATC 2 cut(s) 503, 545
LmnI GCTCC 5 cut(s) 177, 334, 452, 588, 696
Lsp1109I GCAGC 6 cut(s) 57, 678, 681, 729, 948, 1020
LweI GCATC 1 cut(s) 353
MaeIII GTNAC 1 cut(s) 962
MalI GATC 2 cut(s) 505, 547
MbiI CCGCTC 1 cut(s) 329
MboI GATC 2 cut(s) 503, 545
MboII GAAGA 5 cut(s) 17, 66, 69, 394, 439
MflI RGATCY 2 cut(s) 503, 545
MhlI GDGCHC 4 cut(s) 174, 461, 701, 771
MluCI AATT 2 cut(s) 17, 838
MluI ACGCGT 1 cut(s) 516
MlyI GAGTC 5 cut(s) 68, 248, 614, 660, 784
MmeI TCCRAC 1 cut(s) 335
MreI CGCCGGCG 1 cut(s) 806
MroI TCCGGA 2 cut(s) 108, 283
MroNI GCCGGC 2 cut(s) 806, 917
MseI TTAA 3 cut(s) 369, 999, 1033
MspA1I CMGCKG 3 cut(s) 146, 278, 948
MspR9I CCNGG 5 cut(s) 309, 559, 639, 648, 674
Mva1269I GAATGC 1 cut(s) 745
MvaI CCWGG 1 cut(s) 309
MvnI CGCG 5 cut(s) 518, 575, 693, 812, 948
MwoI GCNNNNNNNGC 8 cut(s) 461, 515, 688, 818, 927, 936, 945, 954
NaeI GCCGGC 2 cut(s) 808, 919
NciI CCSGG 4 cut(s) 559, 639, 648, 674
NdeII GATC 2 cut(s) 503, 545
NgoMIV GCCGGC 2 cut(s) 806, 917
NlaIII CATG 1 cut(s) 734
NlaIV GGNNCC 7 cut(s) 288, 300, 313, 448, 547, 726, 754
NmeAIII GCCGAG 2 cut(s) 440, 490
NmuCI GTSAC 1 cut(s) 962
NsbI TGCGCA 1 cut(s) 1007
NspI RCATGY 1 cut(s) 734
PauI GCGCGC 1 cut(s) 573
PciI ACATGT 1 cut(s) 730
PcsI WCGNNNNNNNCGW 1 cut(s) 58
PctI GAATGC 1 cut(s) 745
PdiI GCCGGC 2 cut(s) 808, 919
PfeI GAWTC 1 cut(s) 112
PkrI GCNGC 6 cut(s) 47, 668, 671, 719, 938, 1010
PleI GAGTC 5 cut(s) 68, 248, 613, 659, 783
PpsI GAGTC 5 cut(s) 68, 248, 613, 659, 783
PpuMI RGGWCCY 1 cut(s) 311
PscI ACATGT 1 cut(s) 730
Psp124BI GAGCTC 2 cut(s) 461, 701
Psp5II RGGWCCY 1 cut(s) 311
Psp6I CCWGG 1 cut(s) 307
PspFI CCCAGC 1 cut(s) 302
PspGI CCWGG 1 cut(s) 307
PspN4I GGNNCC 7 cut(s) 288, 300, 313, 448, 547, 726, 754
PspPI GGNCC 4 cut(s) 106, 286, 311, 645
PspPPI RGGWCCY 1 cut(s) 311
PsuI RGATCY 2 cut(s) 503, 545
PteI GCGCGC 1 cut(s) 573
PvuII CAGCTG 1 cut(s) 278
RsaI GTAC 4 cut(s) 336, 687, 754, 866
RsaNI GTAC 4 cut(s) 335, 686, 753, 865
SacI GAGCTC 2 cut(s) 461, 701
SacII CCGCGG 1 cut(s) 949
SaqAI TTAA 3 cut(s) 369, 999, 1033
SatI GCNGC 6 cut(s) 46, 667, 670, 718, 937, 1009
Sau3AI GATC 2 cut(s) 503, 545
Sau96I GGNCC 4 cut(s) 106, 286, 311, 645
ScaI AGTACT 1 cut(s) 336
SchI GAGTC 5 cut(s) 68, 248, 614, 660, 784
ScrFI CCNGG 5 cut(s) 309, 559, 639, 648, 674
SduI GDGCHC 4 cut(s) 174, 461, 701, 771
SfaNI GCATC 1 cut(s) 353
SfcI CTRYAG 1 cut(s) 906
Sfr303I CCGCGG 1 cut(s) 949
SgrAI CRCCGGYG 1 cut(s) 806
SgrBI CCGCGG 1 cut(s) 949
SinI GGWCC 3 cut(s) 106, 286, 311
Sse9I AATT 2 cut(s) 17, 838
SstI GAGCTC 2 cut(s) 461, 701
StyD4I CCNGG 5 cut(s) 307, 557, 637, 646, 672
TaaI ACNGT 4 cut(s) 265, 391, 799, 968
TaqI TCGA 5 cut(s) 52, 93, 347, 596, 614
TasI AATT 2 cut(s) 17, 838
TatI WGTACW 1 cut(s) 334
TfiI GAWTC 1 cut(s) 112
Tru1I TTAA 3 cut(s) 369, 999, 1033
Tru9I TTAA 3 cut(s) 369, 999, 1033
TscAI CASTG 1 cut(s) 937
TseFI GTSAC 1 cut(s) 962
TseI GCWGC 6 cut(s) 45, 666, 669, 717, 936, 1008
Tsp45I GTSAC 1 cut(s) 962
TspRI CASTG 1 cut(s) 937
VpaK11BI GGWCC 3 cut(s) 106, 286, 311
XapI RAATTY 2 cut(s) 17, 838
XceI RCATGY 1 cut(s) 734
XmiI GTMKAC 1 cut(s) 521
ZrmI AGTACT 1 cut(s) 336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.