f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G61340 AT1G61340 AT4G05010 AT4G21510 AT4G21510 |
| fragaria_vesca | FvH4_3g04020 FvH4_3g04020 |
| malus_domestica | MD05G1112900.v1.1 MD05G1299400.v1.1 MD05G1325400.v1.1 MD10G1303400.v1.1 |
| prunus_persica | Prupe.4G036800_v2.0.a1 |
| pyrus_communis | pycom05g29940 pycom10g25590 |
| rosa_chinensis | RchiOBHm_Chr2g0138281 RchiOBHm_Chr5g0006321 |
| rosa_laevigata | RLG00000019731 RLG00000031025 RLG00000031364 |
| rosa_multiflora | Rmu_sc0002475.1_g000024 Rmu_sc0003884.1_g000003 Rmu_sc0039919.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00069670 Rroxscaffold_1G00073480 Rroxscaffold_2G00106360 |
| rosa_rugosa | Rorug02G0350800 Rorug04G0421100 |
| rosa_samantha | Rh2AG398500 Rh2BG409300 Rh2CG383700 Rh2CG385300 Rh2DG418800 Rh5AG049000 Rh5BG021300 Rh5BG048200 Rh5CG056400 Rh5DG047300 |
| rosa_wichuraiana | Rw2G032470 Rw5G004880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 45, 97 |
| AccIII | TCCGGA | 1 cut(s) | 387 |
| AciI | CCGC | 2 cut(s) | 45, 393 |
| AfaI | GTAC | 1 cut(s) | 92 |
| AgsI | TTSAA | 5 cut(s) | 34, 178, 289, 372, 431 |
| AluBI | AGCT | 5 cut(s) | 101, 233, 295, 434, 493 |
| AluI | AGCT | 5 cut(s) | 101, 233, 295, 434, 493 |
| Aor13HI | TCCGGA | 1 cut(s) | 387 |
| ApeKI | GCWGC | 2 cut(s) | 184, 463 |
| AspLEI | GCGC | 1 cut(s) | 45 |
| AspS9I | GGNCC | 1 cut(s) | 390 |
| AvaII | GGWCC | 1 cut(s) | 390 |
| AxyI | CCTNAGG | 1 cut(s) | 240 |
| BbvI | GCAGC | 2 cut(s) | 196, 475 |
| BciVI | GTATCC | 1 cut(s) | 171 |
| BfaI | CTAG | 1 cut(s) | 227 |
| BfmI | CTRYAG | 1 cut(s) | 358 |
| BfuI | GTATCC | 1 cut(s) | 171 |
| BisI | GCNGC | 2 cut(s) | 185, 464 |
| BlpI | GCTNAGC | 1 cut(s) | 339 |
| BlsI | GCNGC | 2 cut(s) | 186, 465 |
| Bme18I | GGWCC | 1 cut(s) | 390 |
| BmgT120I | GGNCC | 1 cut(s) | 390 |
| BpmI | CTGGAG | 1 cut(s) | 92 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 339 |
| BpuEI | CTTGAG | 1 cut(s) | 391 |
| BsaAI | YACGTR | 1 cut(s) | 304 |
| BsaBI | GATNNNNATC | 1 cut(s) | 159 |
| BsaWI | WCCGGW | 1 cut(s) | 387 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 65, 95 |
| Bse21I | CCTNAGG | 1 cut(s) | 240 |
| Bse8I | GATNNNNATC | 1 cut(s) | 159 |
| BseAI | TCCGGA | 1 cut(s) | 387 |
| BseGI | GGATG | 1 cut(s) | 427 |
| BseJI | GATNNNNATC | 1 cut(s) | 159 |
| BseMII | CTCAG | 2 cut(s) | 254, 489 |
| BseRI | GAGGAG | 1 cut(s) | 77 |
| BseXI | GCAGC | 2 cut(s) | 196, 475 |
| BseYI | CCCAGC | 1 cut(s) | 164 |
| Bsh1236I | CGCG | 2 cut(s) | 45, 97 |
| BsiSI | CCGG | 1 cut(s) | 388 |
| BsmI | GAATGC | 1 cut(s) | 445 |
| Bsp13I | TCCGGA | 1 cut(s) | 387 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 339 |
| BspACI | CCGC | 2 cut(s) | 45, 393 |
| BspCNI | CTCAG | 2 cut(s) | 253, 490 |
| BspEI | TCCGGA | 1 cut(s) | 387 |
| BspFNI | CGCG | 2 cut(s) | 45, 97 |
| BspHI | TCATGA | 1 cut(s) | 277 |
| Bst4CI | ACNGT | 1 cut(s) | 453 |
| Bst6I | CTCTTC | 1 cut(s) | 107 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 27 |
| BstBAI | YACGTR | 1 cut(s) | 304 |
| BstC8I | GCNNGC | 3 cut(s) | 99, 140, 495 |
| BstDEI | CTNAG | 3 cut(s) | 240, 339, 498 |
| BstF5I | GGATG | 1 cut(s) | 427 |
| BstFNI | CGCG | 2 cut(s) | 45, 97 |
| BstHHI | GCGC | 1 cut(s) | 45 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 27, 230, 440, 469 |
| BstSFI | CTRYAG | 1 cut(s) | 358 |
| BstUI | CGCG | 2 cut(s) | 45, 97 |
| BstV1I | GCAGC | 2 cut(s) | 196, 475 |
| Bsu36I | CCTNAGG | 1 cut(s) | 240 |
| BsuI | GTATCC | 1 cut(s) | 171 |
| BtsCI | GGATG | 1 cut(s) | 427 |
| BtsI | GCAGTG | 1 cut(s) | 350 |
| BtsIMutI | CAGTG | 3 cut(s) | 350, 458, 513 |
| Cac8I | GCNNGC | 3 cut(s) | 99, 140, 495 |
| CciI | TCATGA | 1 cut(s) | 277 |
| CfoI | GCGC | 1 cut(s) | 45 |
| Cfr13I | GGNCC | 1 cut(s) | 390 |
| CpoI | CGGWCCG | 1 cut(s) | 390 |
| Csp6I | GTAC | 1 cut(s) | 91 |
| CspI | CGGWCCG | 1 cut(s) | 390 |
| CviAII | CATG | 2 cut(s) | 278, 525 |
| CviJI | RGCY | 9 cut(s) | 5, 70, 101, 142, 233, 295, 434, 483, 493 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 70, 101, 142, 233, 295, 434, 483, 493 |
| CviQI | GTAC | 1 cut(s) | 91 |
| DdeI | CTNAG | 3 cut(s) | 240, 339, 498 |
| Eam1104I | CTCTTC | 1 cut(s) | 107 |
| EarI | CTCTTC | 1 cut(s) | 107 |
| Eco32I | GATATC | 1 cut(s) | 504 |
| Eco47I | GGWCC | 1 cut(s) | 390 |
| Eco81I | CCTNAGG | 1 cut(s) | 240 |
| EcoRV | GATATC | 1 cut(s) | 504 |
| FaeI | CATG | 2 cut(s) | 281, 528 |
| FaiI | YATR | 5 cut(s) | 279, 360, 419, 468, 526 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 14, 46 |
| FatI | CATG | 2 cut(s) | 277, 524 |
| FauI | CCCGC | 1 cut(s) | 38 |
| Fnu4HI | GCNGC | 2 cut(s) | 185, 464 |
| FokI | GGATG | 1 cut(s) | 434 |
| Fsp4HI | GCNGC | 2 cut(s) | 185, 464 |
| FspBI | CTAG | 1 cut(s) | 227 |
| GlaI | GCGC | 1 cut(s) | 44 |
| GluI | GCNGC | 2 cut(s) | 185, 464 |
| GsaI | CCCAGC | 1 cut(s) | 168 |
| GsuI | CTGGAG | 1 cut(s) | 92 |
| HapII | CCGG | 1 cut(s) | 388 |
| HhaI | GCGC | 1 cut(s) | 45 |
| Hin1II | CATG | 2 cut(s) | 281, 528 |
| Hin6I | GCGC | 1 cut(s) | 43 |
| HinP1I | GCGC | 1 cut(s) | 43 |
| HindIII | AAGCTT | 1 cut(s) | 491 |
| HinfI | GANTC | 4 cut(s) | 155, 209, 247, 328 |
| HpaII | CCGG | 1 cut(s) | 388 |
| Hpy166II | GTNNAC | 2 cut(s) | 93, 511 |
| Hpy188I | TCNGA | 6 cut(s) | 208, 214, 252, 333, 438, 447 |
| Hpy188III | TCNNGA | 3 cut(s) | 242, 278, 388 |
| Hpy8I | GTNNAC | 2 cut(s) | 93, 511 |
| Hpy99I | CGWCG | 1 cut(s) | 416 |
| HpyAV | CCTTC | 2 cut(s) | 153, 378 |
| HpyCH4III | ACNGT | 1 cut(s) | 453 |
| HpyCH4IV | ACGT | 1 cut(s) | 303 |
| HpyCH4V | TGCA | 1 cut(s) | 21 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 27, 230, 440, 469 |
| HpyF3I | CTNAG | 3 cut(s) | 240, 339, 498 |
| HpySE526I | ACGT | 1 cut(s) | 303 |
| Hsp92II | CATG | 2 cut(s) | 281, 528 |
| HspAI | GCGC | 1 cut(s) | 43 |
| Kpn2I | TCCGGA | 1 cut(s) | 387 |
| LmnI | GCTCC | 3 cut(s) | 439, 448, 460 |
| LpnPI | CCDG | 5 cut(s) | 56, 178, 227, 393, 401 |
| Lsp1109I | GCAGC | 2 cut(s) | 196, 475 |
| MaeI | CTAG | 1 cut(s) | 227 |
| MaeII | ACGT | 1 cut(s) | 303 |
| MboII | GAAGA | 2 cut(s) | 124, 190 |
| MluCI | AATT | 2 cut(s) | 197, 315 |
| MlyI | GAGTC | 1 cut(s) | 322 |
| MnlI | CCTC | 9 cut(s) | 55, 58, 102, 108, 229, 249, 274, 450, 526 |
| MroI | TCCGGA | 1 cut(s) | 387 |
| MseI | TTAA | 1 cut(s) | 255 |
| MspI | CCGG | 1 cut(s) | 388 |
| Mva1269I | GAATGC | 1 cut(s) | 445 |
| MvnI | CGCG | 2 cut(s) | 45, 97 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 27, 230, 440, 469 |
| NlaIII | CATG | 2 cut(s) | 281, 528 |
| NmeAIII | GCCGAG | 1 cut(s) | 504 |
| PagI | TCATGA | 1 cut(s) | 277 |
| PctI | GAATGC | 1 cut(s) | 445 |
| PfeI | GAWTC | 3 cut(s) | 155, 209, 247 |
| PkrI | GCNGC | 2 cut(s) | 186, 465 |
| PleI | GAGTC | 1 cut(s) | 322 |
| PpsI | GAGTC | 1 cut(s) | 322 |
| Ppu21I | YACGTR | 1 cut(s) | 304 |
| PspFI | CCCAGC | 1 cut(s) | 164 |
| PspPI | GGNCC | 1 cut(s) | 390 |
| RsaI | GTAC | 1 cut(s) | 92 |
| RsaNI | GTAC | 1 cut(s) | 91 |
| Rsr2I | CGGWCCG | 1 cut(s) | 390 |
| RsrII | CGGWCCG | 1 cut(s) | 390 |
| SaqAI | TTAA | 1 cut(s) | 255 |
| SatI | GCNGC | 2 cut(s) | 185, 464 |
| Sau96I | GGNCC | 1 cut(s) | 390 |
| SchI | GAGTC | 1 cut(s) | 322 |
| SetI | ASST | 8 cut(s) | 103, 221, 235, 297, 306, 370, 436, 495 |
| SfcI | CTRYAG | 1 cut(s) | 358 |
| SinI | GGWCC | 1 cut(s) | 390 |
| SmlI | CTYRAG | 1 cut(s) | 406 |
| SmoI | CTYRAG | 1 cut(s) | 406 |
| Sse9I | AATT | 2 cut(s) | 197, 315 |
| SsiI | CCGC | 2 cut(s) | 45, 393 |
| SspMI | CTAG | 1 cut(s) | 227 |
| TaaI | ACNGT | 1 cut(s) | 453 |
| TaiI | ACGT | 1 cut(s) | 306 |
| TaqI | TCGA | 1 cut(s) | 38 |
| TasI | AATT | 2 cut(s) | 197, 315 |
| TatI | WGTACW | 1 cut(s) | 90 |
| TfiI | GAWTC | 3 cut(s) | 155, 209, 247 |
| Tru1I | TTAA | 1 cut(s) | 255 |
| Tru9I | TTAA | 1 cut(s) | 255 |
| TscAI | CASTG | 3 cut(s) | 350, 458, 513 |
| TseI | GCWGC | 2 cut(s) | 184, 463 |
| TspDTI | ATGAA | 2 cut(s) | 263, 513 |
| TspRI | CASTG | 3 cut(s) | 350, 458, 513 |
| VpaK11BI | GGWCC | 1 cut(s) | 390 |
| XspI | CTAG | 1 cut(s) | 227 |