No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G54540 |
| fragaria_vesca | FvH4_3g21510 |
| malus_domestica | MD03G1215500.v1.1 MD11G1230100.v1.1 |
| prunus_persica | Prupe.4G098000_v2.0.a1 Prupe.4G197300_v2.0.a1 Prupe.5G070000_v2.0.a1 |
| pyrus_communis | pycom03g16390 pycom10g14480 pycom11g20390 |
| rosa_chinensis | RchiOBHm_Chr5g0036951 |
| rosa_laevigata | RLG00000011241 RLG00000033738 |
| rosa_multiflora | Rmu_sc0006147.1_g000006 Rmu_sc0007663.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00044010 Rroxscaffold_7G00166630 |
| rosa_rugosa | Rorug05G0159300 Rorug06G0306700 |
| rosa_samantha | Rh5AG251500 Rh5BG252900 Rh5CG285500 Rh5DG261600 Rh6BG426000 Rh6DG419300 |
| rosa_wichuraiana | Rw5G023150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 76 |
| AclWI | GGATC | 1 cut(s) | 155 |
| AfaI | GTAC | 2 cut(s) | 16, 105 |
| AflIII | ACRYGT | 1 cut(s) | 87 |
| AgsI | TTSAA | 1 cut(s) | 154 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 26, 58 |
| AluBI | AGCT | 1 cut(s) | 122 |
| AluI | AGCT | 1 cut(s) | 122 |
| Alw26I | GTCTC | 1 cut(s) | 106 |
| AlwI | GGATC | 1 cut(s) | 155 |
| AspS9I | GGNCC | 1 cut(s) | 69 |
| AsuNHI | GCTAGC | 1 cut(s) | 118 |
| AvaII | GGWCC | 1 cut(s) | 69 |
| BcoDI | GTCTC | 1 cut(s) | 106 |
| BfaI | CTAG | 1 cut(s) | 119 |
| BmcAI | AGTACT | 1 cut(s) | 105 |
| Bme18I | GGWCC | 1 cut(s) | 69 |
| BmgT120I | GGNCC | 1 cut(s) | 69 |
| BmiI | GGNNCC | 2 cut(s) | 35, 71 |
| BmtI | GCTAGC | 1 cut(s) | 122 |
| BpmI | CTGGAG | 1 cut(s) | 128 |
| BpuEI | CTTGAG | 1 cut(s) | 59 |
| Bse1I | ACTGG | 1 cut(s) | 111 |
| BseNI | ACTGG | 1 cut(s) | 111 |
| BsmAI | GTCTC | 1 cut(s) | 106 |
| Bsp143I | GATC | 2 cut(s) | 82, 147 |
| BspLI | GGNNCC | 2 cut(s) | 35, 71 |
| BspOI | GCTAGC | 1 cut(s) | 122 |
| BspPI | GGATC | 1 cut(s) | 155 |
| BsrI | ACTGG | 1 cut(s) | 111 |
| BssMI | GATC | 2 cut(s) | 82, 147 |
| Bst4CI | ACNGT | 2 cut(s) | 14, 19 |
| BstC8I | GCNNGC | 1 cut(s) | 120 |
| BstKTI | GATC | 2 cut(s) | 85, 150 |
| BstMAI | GTCTC | 1 cut(s) | 106 |
| BstMBI | GATC | 2 cut(s) | 82, 147 |
| BstNSI | RCATGY | 1 cut(s) | 91 |
| BstX2I | RGATCY | 1 cut(s) | 147 |
| BstYI | RGATCY | 1 cut(s) | 147 |
| Cac8I | GCNNGC | 1 cut(s) | 120 |
| Cfr13I | GGNCC | 1 cut(s) | 69 |
| Csp6I | GTAC | 2 cut(s) | 15, 104 |
| CviAII | CATG | 2 cut(s) | 40, 88 |
| CviJI | RGCY | 1 cut(s) | 122 |
| CviKI_1 | RGCY | 1 cut(s) | 122 |
| CviQI | GTAC | 2 cut(s) | 15, 104 |
| DpnI | GATC | 2 cut(s) | 84, 149 |
| DpnII | GATC | 2 cut(s) | 82, 147 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 76 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 76 |
| Eco47I | GGWCC | 1 cut(s) | 69 |
| EcoO109I | RGGNCCY | 1 cut(s) | 69 |
| FaeI | CATG | 2 cut(s) | 43, 91 |
| FaiI | YATR | 5 cut(s) | 41, 55, 89, 101, 128 |
| FatI | CATG | 2 cut(s) | 39, 87 |
| FspBI | CTAG | 1 cut(s) | 119 |
| GsuI | CTGGAG | 1 cut(s) | 128 |
| Hin1II | CATG | 2 cut(s) | 43, 91 |
| HinfI | GANTC | 1 cut(s) | 62 |
| Hpy166II | GTNNAC | 1 cut(s) | 93 |
| Hpy188I | TCNGA | 1 cut(s) | 82 |
| Hpy188III | TCNNGA | 2 cut(s) | 59, 159 |
| Hpy8I | GTNNAC | 1 cut(s) | 93 |
| HpyCH4III | ACNGT | 2 cut(s) | 14, 19 |
| Hsp92II | CATG | 2 cut(s) | 43, 91 |
| Kzo9I | GATC | 2 cut(s) | 82, 147 |
| LpnPI | CCDG | 1 cut(s) | 92 |
| MaeI | CTAG | 1 cut(s) | 119 |
| MaeIII | GTNAC | 1 cut(s) | 19 |
| MalI | GATC | 2 cut(s) | 84, 149 |
| MboI | GATC | 2 cut(s) | 82, 147 |
| MboII | GAAGA | 1 cut(s) | 142 |
| MflI | RGATCY | 1 cut(s) | 147 |
| MnlI | CCTC | 1 cut(s) | 83 |
| MseI | TTAA | 1 cut(s) | 29 |
| NdeII | GATC | 2 cut(s) | 82, 147 |
| NheI | GCTAGC | 1 cut(s) | 118 |
| NlaIII | CATG | 2 cut(s) | 43, 91 |
| NlaIV | GGNNCC | 2 cut(s) | 35, 71 |
| NspI | RCATGY | 1 cut(s) | 91 |
| PciI | ACATGT | 1 cut(s) | 87 |
| PfeI | GAWTC | 1 cut(s) | 62 |
| PpuMI | RGGWCCY | 1 cut(s) | 69 |
| PscI | ACATGT | 1 cut(s) | 87 |
| Psp5II | RGGWCCY | 1 cut(s) | 69 |
| PspN4I | GGNNCC | 2 cut(s) | 35, 71 |
| PspPI | GGNCC | 1 cut(s) | 69 |
| PspPPI | RGGWCCY | 1 cut(s) | 69 |
| PsuI | RGATCY | 1 cut(s) | 147 |
| RsaI | GTAC | 2 cut(s) | 16, 105 |
| RsaNI | GTAC | 2 cut(s) | 15, 104 |
| SaqAI | TTAA | 1 cut(s) | 29 |
| Sau3AI | GATC | 2 cut(s) | 82, 147 |
| Sau96I | GGNCC | 1 cut(s) | 69 |
| ScaI | AGTACT | 1 cut(s) | 105 |
| SetI | ASST | 1 cut(s) | 124 |
| SgeI | CNNG | 8 cut(s) | 52, 71, 78, 88, 100, 119, 131, 156 |
| SinI | GGWCC | 1 cut(s) | 69 |
| SmlI | CTYRAG | 1 cut(s) | 74 |
| SmoI | CTYRAG | 1 cut(s) | 74 |
| SspMI | CTAG | 1 cut(s) | 119 |
| TaaI | ACNGT | 2 cut(s) | 14, 19 |
| TatI | WGTACW | 1 cut(s) | 103 |
| TfiI | GAWTC | 1 cut(s) | 62 |
| Tru1I | TTAA | 1 cut(s) | 29 |
| Tru9I | TTAA | 1 cut(s) | 29 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 1 cut(s) | 69 |
| XceI | RCATGY | 1 cut(s) | 91 |
| XspI | CTAG | 1 cut(s) | 119 |
| ZrmI | AGTACT | 1 cut(s) | 105 |