Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0002792

Physical Location & Seq

Genomic Coordinates Forward (+)

12446359 .. 12451175

Gene Structure 4817 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G200300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1290 bp

ATGAAAGGCGAGCCGGCTGGGCTGATAATCGGGGTATCTATAGGAGTAGTGATTGGAGTGCTTTTGGCAATTTCTGGATTCTTCTGCATTAGGTACCATAGGAGGCGCTTGCAGATAGGGAACAGCAGTTCTCGGAGGACAGCCACTATTCCTATCCGTGCTAATGGTGCTGACTCTTGTACTATATTGTCAGACTCGACCGTTGGTCCAGATTCGCCTGTAAAATCCGGACGCAATGGTTCCTCCTTCTGGCTTGAGGGATTTAAGAAGAGTAATGTGGTCTCAATGTCTGGAATACCTCAGTATTCTTACAAGGATCTGCAAAAAGCAACCTATAACTTTACAACATTGATAGGGCAAGGTGCGTTTGGTCCTGTGTACAAAGCTCAGATGTCAACGGGTGAGACTGTTGCAGTTAAAGTTCTTGCAACTGATTCTAAACAAGGGGAGAAAGAGTTCCAGACTGAGGTTAAGCTATTGGGAAGGTTGCATCACAGAAACCTTGTGAACTTAATTGGATATTGTGCAGAAAAGGGGCAACATATGCTTATATATGTCTACATGAGTAAAGGCAGCTTGGCCTCTCATTTATACAGTGAAAAGCATGAGCCGTTGAGCTGGGATTTGAGGGTTCTTATAGCTTTAGATGTAGCAAGAGGCTTGGAGTATCTTCATGATGGAGCAGTTCCTCCTGTAATACACCGCGATATTAAATCTTCCAATATTCTGTTGGATCAGTCCATGAGAGCCAGGGTAGCTGATTTTGGACTTTCAAGAGAAGAAATGGTGGACAAACATGCAGCTAATATTAAGGGCACGTTTGGTTATCTTGATCCTGAGTACATATCTACAAGAAATTTCACCAAGAAAAGTGACGTTTACAGCTTTGGAGTTTTGCTCTTTGAACTCATAGCTGGAAGAAATCCTCAACAAGGTCTCATGGAATATGTTGAGCTTGCTGCAATGAATACGGAGGGGAAAGTTGGGTGGGAAGAAATTGTGGATTCCCGTCTTAATGGGAACTTCCATATGCAAGAGCTCAACGAAGTGGCAGCTCTTGCATATAAATGTGTCAACCGTGCCCCAAAGAAACGGCCTTCCATGAGAGACATTGTACAAGTGCTATCACGGATGCTCAAAATGAGGCACAACAGGATGCACATGAAATCCTTGTCATCTGTAACAGATGAAGTCACAATTGACCTGAACCAACCGGAAACCAAAATCCAAATGGCTGAACATCGAAGAGAGGAGTCTGCGGACAGCATAGCTGATACCTATGAAGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

430

Amino Acids

47.87

Weight (kDa)

8.92

Isoelectric Point (pI)

40.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002792)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54590 AT5G54590 AT5G54590 AT5G54590
fragaria_vesca	FvH4_3g02990 FvH4_3g21590 FvH4_3g21590 FvH4_3g21590 FvH4_3g21590
malus_domestica	MD03G1214400.v1.1 MD05G1335500.v1.1 MD11G1229400.v1.1
prunus_persica	Prupe.4G029800_v2.0.a1 Prupe.4G200300_v2.0.a1 Prupe.4G200300_v2.0.a1 Prupe.4G200300_v2.0.a1 Prupe.4G200300_v2.0.a1
pyrus_communis	pycom03g16310 pycom11g20290
rosa_chinensis	RchiOBHm_Chr5g0004621 RchiOBHm_Chr5g0037051
rosa_laevigata	RLG00000031246 RLG00000033746
rosa_multiflora	Rmu_co8453033.1_g000001 Rmu_sc0014990.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043900 Rroxscaffold_1G00070920
rosa_rugosa	Rorug04G0412600 Rorug05G0159900 Rorug05G0160000
rosa_samantha	Rh5AG040700 Rh5AG252100 Rh5BG040400 Rh5BG253800 Rh5CG044100 Rh5DG040000 Rh5DG262400
rosa_wichuraiana	Rw5G003910 Rw5G023240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	93
AccB1I	GGYRCC	1 cut(s)	93
AccI	GTMKAC	1 cut(s)	558
AccII	CGCG	1 cut(s)	705
AccIII	TCCGGA	1 cut(s)	227
AciI	CCGC	2 cut(s)	703, 1259
AclWI	GGATC	3 cut(s)	324, 741, 827
AcsI	RAATTY	1 cut(s)	856
AfaI	GTAC	5 cut(s)	95, 181, 380, 842, 1116
AfiI	CCNNNNNNNGG	3 cut(s)	249, 466, 932
AgsI	TTSAA	2 cut(s)	774, 905
AhdI	GACNNNNNGTC	1 cut(s)	204
AjnI	CCWGG	1 cut(s)	749
AloI	GAACNNNNNNTCC	4 cut(s)	112, 144, 440, 472
Alw21I	GWGCWC	1 cut(s)	1041
Alw26I	GTCTC	4 cut(s)	286, 398, 941, 1101
AlwI	GGATC	3 cut(s)	324, 741, 827
Aor13HI	TCCGGA	1 cut(s)	227
AoxI	GGCC	2 cut(s)	579, 1094
ApeKI	GCWGC	4 cut(s)	573, 800, 959, 1052
ApoI	RAATTY	1 cut(s)	856
Asp700I	GAANNNNTTC	1 cut(s)	455
Asp718I	GGTACC	1 cut(s)	93
AspLEI	GCGC	1 cut(s)	108
AspS9I	GGNCC	2 cut(s)	206, 371
AsuHPI	GGTGA	2 cut(s)	413, 853
AvaII	GGWCC	2 cut(s)	206, 371
BaeGI	GKGCMC	2 cut(s)	818, 1084
BanI	GGYRCC	1 cut(s)	93
BanII	GRGCYC	1 cut(s)	1041
Bbv12I	GWGCWC	1 cut(s)	1041
BbvI	GCAGC	4 cut(s)	585, 812, 946, 1064
BccI	CCATC	1 cut(s)	671
BceAI	ACGGC	2 cut(s)	595, 1109
BciT130I	CCWGG	1 cut(s)	751
BcoDI	GTCTC	4 cut(s)	286, 398, 941, 1101
BfmI	CTRYAG	1 cut(s)	39
BfoI	RGCGCY	1 cut(s)	109
BglI	GCCNNNNNGGC	1 cut(s)	19
BisI	GCNGC	4 cut(s)	574, 801, 960, 1053
BlsI	GCNGC	4 cut(s)	575, 802, 961, 1054
Bme1390I	CCNGG	1 cut(s)	751
Bme18I	GGWCC	2 cut(s)	206, 371
BmeRI	GACNNNNNGTC	1 cut(s)	204
BmgT120I	GGNCC	2 cut(s)	206, 371
BmiI	GGNNCC	2 cut(s)	95, 241
BmrFI	CCNGG	1 cut(s)	751
BmsI	GCATC	3 cut(s)	499, 1122, 1146
BplI	GAGNNNNNCTC	2 cut(s)	882, 914
BpuEI	CTTGAG	1 cut(s)	275
BsaI	GGTCTC	2 cut(s)	286, 941
BsaJI	CCNNGG	1 cut(s)	750
BsaWI	WCCGGW	2 cut(s)	227, 1213
BsaXI	ACNNNNNCTCC	2 cut(s)	440, 470
Bsc4I	CCNNNNNNNGG	3 cut(s)	249, 466, 932
Bse118I	RCCGGY	1 cut(s)	13
Bse3DI	GCAATG	2 cut(s)	241, 969
BseAI	TCCGGA	1 cut(s)	227
BseBI	CCWGG	1 cut(s)	751
BseDI	CCNNGG	1 cut(s)	750
BseGI	GGATG	2 cut(s)	1137, 1161
BseLI	CCNNNNNNNGG	3 cut(s)	249, 466, 932
BseMI	GCAATG	2 cut(s)	241, 969
BseMII	CTCAG	4 cut(s)	314, 401, 456, 828
BseRI	GAGGAG	1 cut(s)	1265
BseSI	GKGCMC	2 cut(s)	818, 1084
BseXI	GCAGC	4 cut(s)	585, 812, 946, 1064
BseYI	CCCAGC	2 cut(s)	17, 618
BsgI	GTGCAG	1 cut(s)	546
Bsh1236I	CGCG	1 cut(s)	705
Bsh1285I	CGRYCG	1 cut(s)	201
BshFI	GGCC	2 cut(s)	581, 1096
BshNI	GGYRCC	1 cut(s)	93
BsiEI	CGRYCG	1 cut(s)	201
BsiHKAI	GWGCWC	1 cut(s)	1041
BsiSI	CCGG	3 cut(s)	14, 228, 1214
BslI	CCNNNNNNNGG	3 cut(s)	249, 466, 932
BsmAI	GTCTC	4 cut(s)	286, 398, 941, 1101
BsnI	GGCC	2 cut(s)	581, 1096
Bso31I	GGTCTC	2 cut(s)	286, 941
Bsp1286I	GDGCHC	3 cut(s)	818, 1041, 1084
Bsp13I	TCCGGA	1 cut(s)	227
Bsp1407I	TGTACA	2 cut(s)	378, 1114
Bsp143I	GATC	3 cut(s)	316, 733, 832
BspACI	CCGC	2 cut(s)	703, 1259
BspANI	GGCC	2 cut(s)	581, 1096
BspCNI	CTCAG	4 cut(s)	313, 400, 457, 829
BspEI	TCCGGA	1 cut(s)	227
BspFNI	CGCG	1 cut(s)	705
BspHI	TCATGA	1 cut(s)	673
BspLI	GGNNCC	2 cut(s)	95, 241
BspPI	GGATC	3 cut(s)	324, 741, 827
BspT107I	GGYRCC	1 cut(s)	93
BspTNI	GGTCTC	2 cut(s)	286, 941
BsrDI	GCAATG	2 cut(s)	241, 969
BsrFI	RCCGGY	1 cut(s)	13
BsrGI	TGTACA	2 cut(s)	378, 1114
BssAI	RCCGGY	1 cut(s)	13
BssECI	CCNNGG	1 cut(s)	750
BssMI	GATC	3 cut(s)	316, 733, 832
Bst2UI	CCWGG	1 cut(s)	751
Bst4CI	ACNGT	4 cut(s)	202, 409, 596, 1079
Bst6I	CTCTTC	2 cut(s)	263, 1240
BstAPI	GCANNNNNTGC	2 cut(s)	544, 1058
BstAUI	TGTACA	2 cut(s)	378, 1114
BstC8I	GCNNGC	4 cut(s)	11, 15, 110, 957
BstDEI	CTNAG	4 cut(s)	300, 387, 465, 837
BstENI	CCTNNNNNAGG	1 cut(s)	930
BstF5I	GGATG	2 cut(s)	1137, 1161
BstFNI	CGCG	1 cut(s)	705
BstH2I	RGCGCY	1 cut(s)	109
BstHHI	GCGC	1 cut(s)	108
BstKTI	GATC	3 cut(s)	319, 736, 835
BstMAI	GTCTC	4 cut(s)	286, 398, 941, 1101
BstMBI	GATC	3 cut(s)	316, 733, 832
BstMCI	CGRYCG	1 cut(s)	201
BstMWI	GCNNNNNNNGC	5 cut(s)	19, 167, 544, 755, 1058
BstNI	CCWGG	1 cut(s)	751
BstNSI	RCATGY	1 cut(s)	800
BstSCI	CCNGG	1 cut(s)	749
BstSFI	CTRYAG	1 cut(s)	39
BstSLI	GKGCMC	2 cut(s)	818, 1084
BstUI	CGCG	1 cut(s)	705
BstV1I	GCAGC	4 cut(s)	585, 812, 946, 1064
BstX2I	RGATCY	1 cut(s)	316
BstYI	RGATCY	1 cut(s)	316
BsuRI	GGCC	2 cut(s)	581, 1096
BtsCI	GGATG	2 cut(s)	1137, 1161
BtsIMutI	CAGTG	1 cut(s)	601
Cac8I	GCNNGC	4 cut(s)	11, 15, 110, 957
CciI	TCATGA	1 cut(s)	673
CfoI	GCGC	1 cut(s)	108
Cfr10I	RCCGGY	1 cut(s)	13
Cfr13I	GGNCC	2 cut(s)	206, 371
CseI	GACGC	1 cut(s)	240
Csp6I	GTAC	5 cut(s)	94, 180, 379, 841, 1115
CviAII	CATG	8 cut(s)	562, 605, 674, 742, 797, 940, 1102, 1162
CviQI	GTAC	5 cut(s)	94, 180, 379, 841, 1115
DdeI	CTNAG	4 cut(s)	300, 387, 465, 837
DpnI	GATC	3 cut(s)	318, 735, 834
DpnII	GATC	3 cut(s)	316, 733, 832
DriI	GACNNNNNGTC	1 cut(s)	204
Eam1104I	CTCTTC	2 cut(s)	263, 1240
Eam1105I	GACNNNNNGTC	1 cut(s)	204
EarI	CTCTTC	2 cut(s)	263, 1240
Ecl136II	GAGCTC	1 cut(s)	1039
Eco24I	GRGCYC	1 cut(s)	1041
Eco31I	GGTCTC	2 cut(s)	286, 941
Eco47I	GGWCC	2 cut(s)	206, 371
Eco53kI	GAGCTC	1 cut(s)	1039
EcoICRI	GAGCTC	1 cut(s)	1039
EcoNI	CCTNNNNNAGG	1 cut(s)	930
EcoRII	CCWGG	1 cut(s)	749
EcoT38I	GRGCYC	1 cut(s)	1041
FaeI	CATG	8 cut(s)	565, 608, 677, 745, 800, 943, 1105, 1165
FatI	CATG	8 cut(s)	561, 604, 673, 741, 796, 939, 1101, 1161
FauNDI	CATATG	2 cut(s)	543, 1029
FblI	GTMKAC	1 cut(s)	558
Fnu4HI	GCNGC	4 cut(s)	574, 801, 960, 1053
FokI	GGATG	2 cut(s)	1144, 1168
FriOI	GRGCYC	1 cut(s)	1041
Fsp4HI	GCNGC	4 cut(s)	574, 801, 960, 1053
GlaI	GCGC	1 cut(s)	107
GluI	GCNGC	4 cut(s)	574, 801, 960, 1053
GsaI	CCCAGC	2 cut(s)	21, 622
HaeII	RGCGCY	1 cut(s)	109
HaeIII	GGCC	2 cut(s)	581, 1096
HapII	CCGG	3 cut(s)	14, 228, 1214
HgaI	GACGC	1 cut(s)	240
HhaI	GCGC	1 cut(s)	108
Hin1II	CATG	8 cut(s)	565, 608, 677, 745, 800, 943, 1105, 1165
Hin6I	GCGC	1 cut(s)	106
HinP1I	GCGC	1 cut(s)	106
HincII	GTYRAC	2 cut(s)	396, 1075
HindII	GTYRAC	2 cut(s)	396, 1075
HinfI	GANTC	7 cut(s)	78, 173, 194, 212, 434, 1004, 1253
HpaII	CCGG	3 cut(s)	14, 228, 1214
HphI	GGTGA	2 cut(s)	413, 853
Hpy166II	GTNNAC	7 cut(s)	379, 396, 508, 559, 790, 880, 1075
Hpy188I	TCNGA	3 cut(s)	135, 193, 390
Hpy188III	TCNNGA	9 cut(s)	75, 209, 228, 291, 460, 674, 774, 830, 836
Hpy8I	GTNNAC	7 cut(s)	379, 396, 508, 559, 790, 880, 1075
HpyAV	CCTTC	3 cut(s)	256, 477, 1107
HpyCH4III	ACNGT	4 cut(s)	202, 409, 596, 1079
HpyCH4IV	ACGT	2 cut(s)	818, 876
HpyF10VI	GCNNNNNNNGC	5 cut(s)	19, 167, 544, 755, 1058
HpyF3I	CTNAG	4 cut(s)	300, 387, 465, 837
HpySE526I	ACGT	2 cut(s)	818, 876
Hsp92II	CATG	8 cut(s)	565, 608, 677, 745, 800, 943, 1105, 1165
HspAI	GCGC	1 cut(s)	106
Kpn2I	TCCGGA	1 cut(s)	227
KpnI	GGTACC	1 cut(s)	97
KroI	GCCGGC	1 cut(s)	13
KroNI	GCCGGC	1 cut(s)	15
Kzo9I	GATC	3 cut(s)	316, 733, 832
LmnI	GCTCC	1 cut(s)	680
Lsp1109I	GCAGC	4 cut(s)	585, 812, 946, 1064
LweI	GCATC	3 cut(s)	499, 1122, 1146
MaeII	ACGT	2 cut(s)	818, 876
MaeIII	GTNAC	3 cut(s)	872, 1180, 1192
MalI	GATC	3 cut(s)	318, 735, 834
MboI	GATC	3 cut(s)	316, 733, 832
MboII	GAAGA	8 cut(s)	73, 280, 662, 708, 791, 930, 1004, 1257
MfeI	CAATTG	1 cut(s)	1197
MflI	RGATCY	1 cut(s)	316
MhlI	GDGCHC	3 cut(s)	818, 1041, 1084
MluCI	AATT	5 cut(s)	69, 513, 856, 996, 1197
MlyI	GAGTC	3 cut(s)	167, 188, 1262
MmeI	TCCRAC	1 cut(s)	711
MroI	TCCGGA	1 cut(s)	227
MroNI	GCCGGC	1 cut(s)	13
MroXI	GAANNNNTTC	1 cut(s)	455
MseI	TTAA	7 cut(s)	264, 417, 471, 512, 711, 810, 1014
MslI	CAYNNNNRTG	1 cut(s)	1066
MspI	CCGG	3 cut(s)	14, 228, 1214
MspR9I	CCNGG	1 cut(s)	751
MunI	CAATTG	1 cut(s)	1197
MvaI	CCWGG	1 cut(s)	751
MvnI	CGCG	1 cut(s)	705
MwoI	GCNNNNNNNGC	5 cut(s)	19, 167, 544, 755, 1058
NaeI	GCCGGC	1 cut(s)	15
NdeI	CATATG	2 cut(s)	543, 1029
NdeII	GATC	3 cut(s)	316, 733, 832
NgoMIV	GCCGGC	1 cut(s)	13
NlaIII	CATG	8 cut(s)	565, 608, 677, 745, 800, 943, 1105, 1165
NlaIV	GGNNCC	2 cut(s)	95, 241
NmuCI	GTSAC	2 cut(s)	872, 1192
NspI	RCATGY	1 cut(s)	800
PagI	TCATGA	1 cut(s)	673
PdiI	GCCGGC	1 cut(s)	15
PdmI	GAANNNNTTC	1 cut(s)	455
PfeI	GAWTC	4 cut(s)	78, 212, 434, 1004
PkrI	GCNGC	4 cut(s)	575, 802, 961, 1054
PleI	GAGTC	3 cut(s)	167, 188, 1261
PpsI	GAGTC	3 cut(s)	167, 188, 1261
Psp124BI	GAGCTC	1 cut(s)	1041
Psp6I	CCWGG	1 cut(s)	749
PspFI	CCCAGC	2 cut(s)	17, 618
PspGI	CCWGG	1 cut(s)	749
PspN4I	GGNNCC	2 cut(s)	95, 241
PspPI	GGNCC	2 cut(s)	206, 371
PsuI	RGATCY	1 cut(s)	316
RsaI	GTAC	5 cut(s)	95, 181, 380, 842, 1116
RsaNI	GTAC	5 cut(s)	94, 180, 379, 841, 1115
RseI	CAYNNNNRTG	1 cut(s)	1066
SacI	GAGCTC	1 cut(s)	1041
SaqAI	TTAA	7 cut(s)	264, 417, 471, 512, 711, 810, 1014
SatI	GCNGC	4 cut(s)	574, 801, 960, 1053
Sau3AI	GATC	3 cut(s)	316, 733, 832
Sau96I	GGNCC	2 cut(s)	206, 371
SchI	GAGTC	3 cut(s)	167, 188, 1262
ScrFI	CCNGG	1 cut(s)	751
SduI	GDGCHC	3 cut(s)	818, 1041, 1084
SfaNI	GCATC	3 cut(s)	499, 1122, 1146
SfcI	CTRYAG	1 cut(s)	39
SinI	GGWCC	2 cut(s)	206, 371
SmiMI	CAYNNNNRTG	1 cut(s)	1066
SmlI	CTYRAG	1 cut(s)	254
SmoI	CTYRAG	1 cut(s)	254
Sse9I	AATT	5 cut(s)	69, 513, 856, 996, 1197
SsiI	CCGC	2 cut(s)	703, 1259
SspI	AATATT	2 cut(s)	724, 808
SstI	GAGCTC	1 cut(s)	1041
StyD4I	CCNGG	1 cut(s)	749
TaaI	ACNGT	4 cut(s)	202, 409, 596, 1079
TaiI	ACGT	2 cut(s)	821, 879
TaqI	TCGA	2 cut(s)	197, 1243
TasI	AATT	5 cut(s)	69, 513, 856, 996, 1197
TatI	WGTACW	4 cut(s)	179, 378, 840, 1114
TfiI	GAWTC	4 cut(s)	78, 212, 434, 1004
Tru1I	TTAA	7 cut(s)	264, 417, 471, 512, 711, 810, 1014
Tru9I	TTAA	7 cut(s)	264, 417, 471, 512, 711, 810, 1014
TscAI	CASTG	1 cut(s)	601
TseFI	GTSAC	2 cut(s)	872, 1192
TseI	GCWGC	4 cut(s)	573, 800, 959, 1052
Tsp45I	GTSAC	2 cut(s)	872, 1192
TspDTI	ATGAA	5 cut(s)	17, 662, 980, 1178, 1203
TspGWI	ACGGA	3 cut(s)	146, 986, 1144
TspRI	CASTG	1 cut(s)	601
VpaK11BI	GGWCC	2 cut(s)	206, 371
XagI	CCTNNNNNAGG	1 cut(s)	930
XapI	RAATTY	1 cut(s)	856
XceI	RCATGY	1 cut(s)	800
XcmI	CCANNNNNNNNNTGG	2 cut(s)	727, 1228
XmiI	GTMKAC	1 cut(s)	558
XmnI	GAANNNNTTC	1 cut(s)	455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.