RH5DG262400

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG262400.1

Sequence Viewer

Length: 1293 bp
ATGAAAGGCGAGCCAGTTGGACTGATCATTGGGGTTTCTATAGGGGTAGTGATTGGAGTGCTTTTGGCAATTTCTGGGTTCTTCTGCGTTAGGTACCATAGGAAGCGTATGCAAATAGGGAACAGCAGTTCTCGAAGGGCAGCAAATCTTCCTATTCGTGCTAATGGCGCCGACTCTTGTACAATTTTGTCAGACTCGACACTTGGTCCAGACTCACCTGTCAAATCTGAAAGGACTGGTGGTTCCTTCTGGTTTGTTGAAGGATTTAAGAGGAGTAATGTAGTCTCAATGTCTGGAATACCCGAGTATTCTTACAAGGATCTGCAGAAGGCAACCTATAATTTTACAACATTGATAGGGCAAGGTGCATTTGGTCCTGTGTACAAAGCTCAGATGTTAACGGGTGAGACTGTTGCCGTTAAAGTGCTTGCAACTGATTCTAAGCAAGGGGAGAAAGAGTTTCAGACAGAGGTTAAGTTACTGGGAAGATTGCATCACAGGAACCTCGTGAACTTAATTGGATACTGTGCAGAAAAAGGCCAACATATGCTTATTTATGTCTACATGAGTAAAGGGAGTTTGGCCTCTCATTTGTATGATGAAAAGAATGAGCCATTGAGCTGGGATTTGAGGGTTCATATAGCTTTAGATGTTGCAAGGGGCTTGGAGTATCTTCATGATGGAGCAGTTCCTCCTGTAATACACCGGGATATCAAATCCAACAATATCCTGTTGGATGAATCCATGAGAGCCAGGGTAGCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGACAAACATGCAGCTATTAGGGGAACCTTTGGCTATCTAGATCCCGAGTATATCTCTACTAGAAATTTCACCAAGAAAAGTGATGTTTACAGCTTTGGAGTTTTGCTGTTTGAACTCATAGCTGGAAGAAATCCTCAACAGGGTCTGATGGAATATGTGGAGCTTGCGGCAATGAATACGGAGGGGAAATTTGGGTGGGAGGAAATTGTGGATTCCCGTCTTAATGGGAACTTTGATGTGCAAGAGCTCAACGAAGTGGCAGCTCTTGCATATAAATGTGTCAGCCGCTCCCCAAAAAAGCGGTCTTCCATGAGAGACATTGTACAAGTGCTATCACGAATGCTGAAAGTGAGGCACAATAGAAAGCACCATGCGAAATCATTGTCATCCACAGCAGAGGAAGTTATGATTGACGTGAACCAACCAGAAACCAAAATTCAAATGGCTGAACATCAAAGAGATGAGTCTATGGACAGCACAGCCGATACGTATGATTTATAG

Protein Analysis

430

Amino Acids

48.08

Weight (kDa)

7.72

Isoelectric Point (pI)

39.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 113 - 373 3.2e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 115 - 375 1e-51 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 218
Acc65I GGTACC 1 cut(s) 93
AccB1I GGYRCC 2 cut(s) 93, 167
AccBSI CCGCTC 1 cut(s) 1080
AccI GTMKAC 1 cut(s) 561
AciI CCGC 3 cut(s) 959, 1078, 1093
AclWI GGATC 2 cut(s) 327, 827
AcsI RAATTY 3 cut(s) 856, 980, 1227
AcyI GRCGYC 1 cut(s) 168
AfaI GTAC 4 cut(s) 95, 181, 383, 1116
AfiI CCNNNNNNNGG 1 cut(s) 932
AgsI TTSAA 4 cut(s) 260, 777, 905, 1232
AhdI GACNNNNNGTC 1 cut(s) 204
AjiI CACGTC 1 cut(s) 1207
AjnI CCWGG 1 cut(s) 752
AloI GAACNNNNNNTCC 4 cut(s) 112, 144, 226, 258
Alw21I GWGCWC 1 cut(s) 1041
Alw26I GTCTC 3 cut(s) 289, 401, 1101
AlwI GGATC 2 cut(s) 327, 827
AlwNI CAGNNNCTG 1 cut(s) 937
Ama87I CYCGRG 2 cut(s) 302, 836
AoxI GGCC 2 cut(s) 538, 582
ApeKI GCWGC 3 cut(s) 140, 803, 1052
ApoI RAATTY 3 cut(s) 856, 980, 1227
ArsI GACNNNNNNTTYG 4 cut(s) 1079, 1111, 1160, 1192
Asp718I GGTACC 1 cut(s) 93
AspLEI GCGC 1 cut(s) 170
AspS9I GGNCC 2 cut(s) 206, 374
AsuC2I CCSGG 1 cut(s) 707
AsuHPI GGTGA 3 cut(s) 207, 416, 853
AvaI CYCGRG 2 cut(s) 302, 836
AvaII GGWCC 2 cut(s) 206, 374
BanI GGYRCC 2 cut(s) 93, 167
BanII GRGCYC 1 cut(s) 1041
BauI CACGAG 1 cut(s) 506
BbsI GAAGAC 1 cut(s) 1089
Bbv12I GWGCWC 1 cut(s) 1041
BbvI GCAGC 3 cut(s) 152, 815, 1064
BccI CCATC 3 cut(s) 674, 781, 934
BceAI ACGGC 1 cut(s) 401
BciT130I CCWGG 1 cut(s) 754
BciVI GTATCC 1 cut(s) 515
BclI TGATCA 1 cut(s) 24
BcnI CCSGG 1 cut(s) 707
BcoDI GTCTC 3 cut(s) 289, 401, 1101
BfaI CTAG 2 cut(s) 830, 852
BfmI CTRYAG 2 cut(s) 39, 323
BfoI RGCGCY 1 cut(s) 171
BfuI GTATCC 1 cut(s) 515
BisI GCNGC 5 cut(s) 141, 804, 960, 1053, 1078
BlsI GCNGC 5 cut(s) 142, 805, 961, 1054, 1079
Bme1390I CCNGG 2 cut(s) 707, 754
Bme18I GGWCC 2 cut(s) 206, 374
BmeRI GACNNNNNGTC 1 cut(s) 204
BmeT110I CYCGRG 2 cut(s) 302, 836
BmgBI CACGTC 1 cut(s) 1207
BmgT120I GGNCC 2 cut(s) 206, 374
BmiI GGNNCC 5 cut(s) 95, 169, 244, 503, 817
BmrFI CCNGG 2 cut(s) 707, 754
BmrI ACTGGG 1 cut(s) 491
BmsI GCATC 1 cut(s) 502
BmuI ACTGGG 1 cut(s) 491
BpiI GAAGAC 1 cut(s) 1089
BplI GAGNNNNNCTC 2 cut(s) 830, 862
BpuMI CCSGG 1 cut(s) 707
BsaAI YACGTR 1 cut(s) 1281
BsaHI GRCGYC 1 cut(s) 168
BsaJI CCNNGG 1 cut(s) 753
BsaXI ACNNNNNCTCC 2 cut(s) 443, 473
Bsc4I CCNNNNNNNGG 1 cut(s) 932
Bse1I ACTGG 3 cut(s) 14, 241, 486
Bse3DI GCAATG 1 cut(s) 969
BseBI CCWGG 1 cut(s) 754
BseDI CCNNGG 1 cut(s) 753
BseGI GGATG 2 cut(s) 742, 1178
BseLI CCNNNNNNNGG 1 cut(s) 932
BseMI GCAATG 1 cut(s) 969
BseMII CTCAG 1 cut(s) 404
BseNI ACTGG 3 cut(s) 14, 241, 486
BseRI GAGGAG 1 cut(s) 286
BseXI GCAGC 3 cut(s) 152, 815, 1064
BseYI CCCAGC 1 cut(s) 621
BsgI GTGCAG 1 cut(s) 549
BshFI GGCC 2 cut(s) 540, 584
BshNI GGYRCC 2 cut(s) 93, 167
BsiHKAI GWGCWC 1 cut(s) 1041
BsiHKCI CYCGRG 2 cut(s) 302, 836
BsiSI CCGG 1 cut(s) 706
BslI CCNNNNNNNGG 1 cut(s) 932
BsmAI GTCTC 3 cut(s) 289, 401, 1101
BsmI GAATGC 1 cut(s) 1137
BsnI GGCC 2 cut(s) 540, 584
BsoBI CYCGRG 2 cut(s) 302, 836
Bsp1286I GDGCHC 1 cut(s) 1041
Bsp1407I TGTACA 3 cut(s) 179, 381, 1114
Bsp143I GATC 3 cut(s) 24, 319, 832
BspACI CCGC 3 cut(s) 959, 1078, 1093
BspANI GGCC 2 cut(s) 540, 584
BspCNI CTCAG 1 cut(s) 403
BspHI TCATGA 1 cut(s) 676
BspLI GGNNCC 5 cut(s) 95, 169, 244, 503, 817
BspMAI CTGCAG 1 cut(s) 327
BspPI GGATC 2 cut(s) 327, 827
BspT107I GGYRCC 2 cut(s) 93, 167
BsrBI CCGCTC 1 cut(s) 1080
BsrDI GCAATG 1 cut(s) 969
BsrGI TGTACA 3 cut(s) 179, 381, 1114
BsrI ACTGG 3 cut(s) 14, 241, 486
BssECI CCNNGG 1 cut(s) 753
BssMI GATC 3 cut(s) 24, 319, 832
BssNI GRCGYC 1 cut(s) 168
BssSI CACGAG 1 cut(s) 506
Bst2BI CACGAG 1 cut(s) 506
Bst2UI CCWGG 1 cut(s) 754
Bst4CI ACNGT 2 cut(s) 412, 527
Bst6I CTCTTC 1 cut(s) 777
BstACI GRCGYC 1 cut(s) 168
BstAPI GCANNNNNTGC 1 cut(s) 1058
BstAUI TGTACA 3 cut(s) 179, 381, 1114
BstBAI YACGTR 1 cut(s) 1281
BstC8I GCNNGC 3 cut(s) 11, 429, 957
BstDEI CTNAG 2 cut(s) 390, 441
BstF5I GGATG 2 cut(s) 742, 1178
BstH2I RGCGCY 1 cut(s) 171
BstHHI GCGC 1 cut(s) 170
BstKTI GATC 3 cut(s) 27, 322, 835
BstMAI GTCTC 3 cut(s) 289, 401, 1101
BstMBI GATC 3 cut(s) 24, 319, 832
BstMWI GCNNNNNNNGC 3 cut(s) 167, 758, 1058
BstNI CCWGG 1 cut(s) 754
BstNSI RCATGY 1 cut(s) 803
BstSCI CCNGG 2 cut(s) 705, 752
BstSFI CTRYAG 2 cut(s) 39, 323
BstSNI TACGTA 1 cut(s) 1281
BstV1I GCAGC 3 cut(s) 152, 815, 1064
BstV2I GAAGAC 1 cut(s) 1089
BstX2I RGATCY 2 cut(s) 319, 832
BstXI CCANNNNNNTGG 1 cut(s) 621
BstYI RGATCY 2 cut(s) 319, 832
BsuI GTATCC 1 cut(s) 515
BsuRI GGCC 2 cut(s) 540, 584
BtrI CACGTC 1 cut(s) 1207
BtsCI GGATG 2 cut(s) 742, 1178
Cac8I GCNNGC 3 cut(s) 11, 429, 957
CaiI CAGNNNCTG 1 cut(s) 937
CciI TCATGA 1 cut(s) 676
CfoI GCGC 1 cut(s) 170
Cfr13I GGNCC 2 cut(s) 206, 374
Csp6I GTAC 4 cut(s) 94, 180, 382, 1115
CviAII CATG 6 cut(s) 565, 677, 745, 800, 1102, 1163
CviQI GTAC 4 cut(s) 94, 180, 382, 1115
DdeI CTNAG 2 cut(s) 390, 441
DinI GGCGCC 1 cut(s) 169
DpnI GATC 3 cut(s) 26, 321, 834
DpnII GATC 3 cut(s) 24, 319, 832
DrdI GACNNNNNNGTC 1 cut(s) 218
DriI GACNNNNNGTC 1 cut(s) 204
DseDI GACNNNNNNGTC 1 cut(s) 218
Eam1104I CTCTTC 1 cut(s) 777
Eam1105I GACNNNNNGTC 1 cut(s) 204
EarI CTCTTC 1 cut(s) 777
Ecl136II GAGCTC 1 cut(s) 1039
Eco105I TACGTA 1 cut(s) 1281
Eco24I GRGCYC 1 cut(s) 1041
Eco32I GATATC 1 cut(s) 712
Eco47I GGWCC 2 cut(s) 206, 374
Eco53kI GAGCTC 1 cut(s) 1039
Eco88I CYCGRG 2 cut(s) 302, 836
EcoICRI GAGCTC 1 cut(s) 1039
EcoRII CCWGG 1 cut(s) 752
EcoRV GATATC 1 cut(s) 712
EcoT38I GRGCYC 1 cut(s) 1041
EgeI GGCGCC 1 cut(s) 169
EheI GGCGCC 1 cut(s) 169
FaeI CATG 6 cut(s) 568, 680, 748, 803, 1105, 1166
FatI CATG 6 cut(s) 564, 676, 744, 799, 1101, 1162
FauNDI CATATG 1 cut(s) 546
FbaI TGATCA 1 cut(s) 24
FblI GTMKAC 1 cut(s) 561
Fnu4HI GCNGC 5 cut(s) 141, 804, 960, 1053, 1078
FokI GGATG 2 cut(s) 749, 1165
FriOI GRGCYC 1 cut(s) 1041
Fsp4HI GCNGC 5 cut(s) 141, 804, 960, 1053, 1078
FspBI CTAG 2 cut(s) 830, 852
GlaI GCGC 1 cut(s) 169
GluI GCNGC 5 cut(s) 141, 804, 960, 1053, 1078
GsaI CCCAGC 1 cut(s) 625
HaeII RGCGCY 1 cut(s) 171
HaeIII GGCC 2 cut(s) 540, 584
HapII CCGG 1 cut(s) 706
HhaI GCGC 1 cut(s) 170
Hin1I GRCGYC 1 cut(s) 168
Hin1II CATG 6 cut(s) 568, 680, 748, 803, 1105, 1166
Hin6I GCGC 1 cut(s) 168
HinP1I GCGC 1 cut(s) 168
HincII GTYRAC 1 cut(s) 399
HindII GTYRAC 1 cut(s) 399
HinfI GANTC 7 cut(s) 173, 194, 212, 437, 740, 1004, 1256
HpaI GTTAAC 1 cut(s) 399
HpaII CCGG 1 cut(s) 706
HphI GGTGA 3 cut(s) 207, 416, 853
Hpy166II GTNNAC 7 cut(s) 382, 399, 511, 562, 793, 880, 1210
Hpy188I TCNGA 5 cut(s) 193, 229, 393, 465, 939
Hpy188III TCNNGA 9 cut(s) 132, 209, 294, 508, 677, 777, 830, 836, 1128
Hpy8I GTNNAC 7 cut(s) 382, 399, 511, 562, 793, 880, 1210
HpyAV CCTTC 4 cut(s) 129, 254, 256, 322
HpyCH4III ACNGT 2 cut(s) 412, 527
HpyCH4IV ACGT 2 cut(s) 1206, 1280
HpyF10VI GCNNNNNNNGC 3 cut(s) 167, 758, 1058
HpyF3I CTNAG 2 cut(s) 390, 441
HpySE526I ACGT 2 cut(s) 1206, 1280
Hsp92I GRCGYC 1 cut(s) 168
Hsp92II CATG 6 cut(s) 568, 680, 748, 803, 1105, 1166
HspAI GCGC 1 cut(s) 168
KasI GGCGCC 1 cut(s) 167
KpnI GGTACC 1 cut(s) 97
Ksp22I TGATCA 1 cut(s) 24
KspAI GTTAAC 1 cut(s) 399
Kzo9I GATC 3 cut(s) 24, 319, 832
LmnI GCTCC 3 cut(s) 683, 952, 1085
Lsp1109I GCAGC 3 cut(s) 152, 815, 1064
LweI GCATC 1 cut(s) 502
MaeI CTAG 2 cut(s) 830, 852
MaeII ACGT 2 cut(s) 1206, 1280
MaeIII GTNAC 1 cut(s) 477
MalI GATC 3 cut(s) 26, 321, 834
MbiI CCGCTC 1 cut(s) 1080
MboI GATC 3 cut(s) 24, 319, 832
MboII GAAGA 7 cut(s) 73, 140, 498, 665, 794, 930, 1089
MflI RGATCY 2 cut(s) 319, 832
MhlI GDGCHC 1 cut(s) 1041
MluCI AATT 8 cut(s) 69, 183, 340, 516, 856, 980, 996, 1227
Mly113I GGCGCC 1 cut(s) 168
MlyI GAGTC 4 cut(s) 167, 188, 206, 1265
MmeI TCCRAC 2 cut(s) 714, 744
MseI TTAA 6 cut(s) 267, 398, 420, 474, 515, 1014
MslI CAYNNNNRTG 2 cut(s) 594, 1066
MspI CCGG 1 cut(s) 706
MspR9I CCNGG 2 cut(s) 707, 754
Mva1269I GAATGC 1 cut(s) 1137
MvaI CCWGG 1 cut(s) 754
MwoI GCNNNNNNNGC 3 cut(s) 167, 758, 1058
NarI GGCGCC 1 cut(s) 168
NciI CCSGG 1 cut(s) 707
NdeI CATATG 1 cut(s) 546
NdeII GATC 3 cut(s) 24, 319, 832
NlaIII CATG 6 cut(s) 568, 680, 748, 803, 1105, 1166
NlaIV GGNNCC 5 cut(s) 95, 169, 244, 503, 817
NspI RCATGY 1 cut(s) 803
PagI TCATGA 1 cut(s) 676
PctI GAATGC 1 cut(s) 1137
PfeI GAWTC 3 cut(s) 437, 740, 1004
PkrI GCNGC 5 cut(s) 142, 805, 961, 1054, 1079
PleI GAGTC 4 cut(s) 167, 188, 206, 1264
PluTI GGCGCC 1 cut(s) 171
PpsI GAGTC 4 cut(s) 167, 188, 206, 1264
Ppu21I YACGTR 1 cut(s) 1281
Psp124BI GAGCTC 1 cut(s) 1041
Psp6I CCWGG 1 cut(s) 752
PspFI CCCAGC 1 cut(s) 621
PspGI CCWGG 1 cut(s) 752
PspN4I GGNNCC 5 cut(s) 95, 169, 244, 503, 817
PspPI GGNCC 2 cut(s) 206, 374
PstI CTGCAG 1 cut(s) 327
PstNI CAGNNNCTG 1 cut(s) 937
PsuI RGATCY 2 cut(s) 319, 832
RsaI GTAC 4 cut(s) 95, 181, 383, 1116
RsaNI GTAC 4 cut(s) 94, 180, 382, 1115
RseI CAYNNNNRTG 2 cut(s) 594, 1066
SacI GAGCTC 1 cut(s) 1041
SaqAI TTAA 6 cut(s) 267, 398, 420, 474, 515, 1014
SatI GCNGC 5 cut(s) 141, 804, 960, 1053, 1078
Sau3AI GATC 3 cut(s) 24, 319, 832
Sau96I GGNCC 2 cut(s) 206, 374
SchI GAGTC 4 cut(s) 167, 188, 206, 1265
ScrFI CCNGG 2 cut(s) 707, 754
SduI GDGCHC 1 cut(s) 1041
SfaNI GCATC 1 cut(s) 502
SfcI CTRYAG 2 cut(s) 39, 323
SfoI GGCGCC 1 cut(s) 169
SinI GGWCC 2 cut(s) 206, 374
SmiMI CAYNNNNRTG 2 cut(s) 594, 1066
SnaBI TACGTA 1 cut(s) 1281
Sse9I AATT 8 cut(s) 69, 183, 340, 516, 856, 980, 996, 1227
SsiI CCGC 3 cut(s) 959, 1078, 1093
SspDI GGCGCC 1 cut(s) 167
SspMI CTAG 2 cut(s) 830, 852
SstI GAGCTC 1 cut(s) 1041
StyD4I CCNGG 2 cut(s) 705, 752
TaaI ACNGT 2 cut(s) 412, 527
TaiI ACGT 2 cut(s) 1209, 1283
TaqI TCGA 2 cut(s) 133, 197
TasI AATT 8 cut(s) 69, 183, 340, 516, 856, 980, 996, 1227
TatI WGTACW 3 cut(s) 179, 381, 1114
TauI GCSGC 2 cut(s) 962, 1080
TfiI GAWTC 3 cut(s) 437, 740, 1004
Tru1I TTAA 6 cut(s) 267, 398, 420, 474, 515, 1014
Tru9I TTAA 6 cut(s) 267, 398, 420, 474, 515, 1014
TseI GCWGC 3 cut(s) 140, 803, 1052
TspDTI ATGAA 6 cut(s) 17, 615, 626, 665, 753, 980
TspGWI ACGGA 1 cut(s) 986
VpaK11BI GGWCC 2 cut(s) 206, 374
XapI RAATTY 3 cut(s) 856, 980, 1227
XbaI TCTAGA 1 cut(s) 829
XceI RCATGY 1 cut(s) 803
XcmI CCANNNNNNNNNTGG 1 cut(s) 1231
XmiI GTMKAC 1 cut(s) 561
XspI CTAG 2 cut(s) 830, 852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.