Transcription factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26930 |
| fragaria_vesca | FvH4_3g22960 FvH4_3g22960 FvH4_3g22960 FvH4_3g22960 FvH4_3g22970 FvH4_3g22970 |
| malus_domestica | MD05G1136100.v1.1 MD11G1215600.v1.1 MD11G1216000.v1.1 |
| prunus_persica | Prupe.4G215500_v2.0.a1 Prupe.4G215500_v2.0.a1 Prupe.4G215600_v2.0.a1 |
| pyrus_communis | pycom11g19020 |
| rosa_chinensis | RchiOBHm_Chr5g0040211 RchiOBHm_Chr5g0040281 |
| rosa_laevigata | RLG00000033968 RLG00000033970 |
| rosa_multiflora | Rmu_co8296705.1_g000001 Rmu_co8344811.1_g000001 Rmu_sc0002908.1_g000007 Rmu_sc0010162.1_g000003 Rmu_sc0014485.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00041020 Rroxscaffold_1G00041030 |
| rosa_rugosa | Rorug05G0184400 Rorug05G0184500 |
| rosa_samantha | Rh5AG271400 Rh5AG271500 Rh5BG274600 Rh5BG275400 Rh5CG307600 Rh5DG282900 Rh5DG283600 |
| rosa_wichuraiana | Rw5G025380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 1337 |
| AccII | CGCG | 1 cut(s) | 171 |
| AclWI | GGATC | 2 cut(s) | 416, 692 |
| AcuI | CTGAAG | 1 cut(s) | 131 |
| AcvI | CACGTG | 1 cut(s) | 88 |
| AdeI | CACNNNGTG | 1 cut(s) | 91 |
| AfaI | GTAC | 3 cut(s) | 329, 865, 1619 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 776, 1411 |
| AgeI | ACCGGT | 1 cut(s) | 216 |
| AgsI | TTSAA | 4 cut(s) | 271, 1092, 1263, 1295 |
| AjnI | CCWGG | 2 cut(s) | 364, 866 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1292, 1324 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1270, 1302 |
| Alw21I | GWGCWC | 1 cut(s) | 1086 |
| Alw26I | GTCTC | 5 cut(s) | 503, 680, 1175, 1426, 1456 |
| AlwI | GGATC | 2 cut(s) | 416, 692 |
| AoxI | GGCC | 3 cut(s) | 208, 246, 1548 |
| ApeKI | GCWGC | 5 cut(s) | 18, 99, 316, 1166, 1498 |
| AsiGI | ACCGGT | 1 cut(s) | 216 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1258 |
| AspLEI | GCGC | 1 cut(s) | 306 |
| AspS9I | GGNCC | 4 cut(s) | 119, 139, 246, 1548 |
| AsuHPI | GGTGA | 4 cut(s) | 535, 706, 742, 1349 |
| AsuII | TTCGAA | 1 cut(s) | 323 |
| AvaII | GGWCC | 2 cut(s) | 119, 139 |
| AxyI | CCTNAGG | 1 cut(s) | 291 |
| BaeGI | GKGCMC | 1 cut(s) | 87 |
| BanII | GRGCYC | 3 cut(s) | 346, 784, 1086 |
| BauI | CACGAG | 1 cut(s) | 670 |
| BbrPI | CACGTG | 1 cut(s) | 88 |
| BbsI | GAAGAC | 1 cut(s) | 274 |
| Bbv12I | GWGCWC | 1 cut(s) | 1086 |
| BbvCI | CCTCAGC | 1 cut(s) | 135 |
| BbvI | GCAGC | 5 cut(s) | 30, 111, 303, 1178, 1510 |
| BccI | CCATC | 7 cut(s) | 548, 606, 710, 719, 779, 1307, 1409 |
| BceAI | ACGGC | 3 cut(s) | 31, 144, 346 |
| BciT130I | CCWGG | 2 cut(s) | 366, 868 |
| BciVI | GTATCC | 1 cut(s) | 1111 |
| BcoDI | GTCTC | 5 cut(s) | 503, 680, 1175, 1426, 1456 |
| BfaI | CTAG | 3 cut(s) | 1163, 1545, 1554 |
| BfmI | CTRYAG | 3 cut(s) | 232, 1053, 1331 |
| BfuI | GTATCC | 1 cut(s) | 1111 |
| Bme1390I | CCNGG | 2 cut(s) | 366, 868 |
| Bme18I | GGWCC | 2 cut(s) | 119, 139 |
| BmgT120I | GGNCC | 4 cut(s) | 119, 139, 246, 1548 |
| BmiI | GGNNCC | 4 cut(s) | 120, 239, 781, 907 |
| BmrFI | CCNGG | 2 cut(s) | 366, 868 |
| BmrI | ACTGGG | 1 cut(s) | 1609 |
| BmsI | GCATC | 3 cut(s) | 938, 1219, 1516 |
| BmuI | ACTGGG | 1 cut(s) | 1609 |
| BpiI | GAAGAC | 1 cut(s) | 274 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1406, 1438 |
| Bpu10I | CCTNAGC | 1 cut(s) | 135 |
| Bpu14I | TTCGAA | 1 cut(s) | 323 |
| BpuEI | CTTGAG | 2 cut(s) | 332, 1136 |
| BsaAI | YACGTR | 1 cut(s) | 88 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1134 |
| BsaI | GGTCTC | 1 cut(s) | 1426 |
| BsaJI | CCNNGG | 3 cut(s) | 122, 365, 775 |
| BsaWI | WCCGGW | 1 cut(s) | 216 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 950, 980 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 776, 1411 |
| Bse118I | RCCGGY | 1 cut(s) | 216 |
| Bse1I | ACTGG | 3 cut(s) | 401, 1075, 1615 |
| Bse21I | CCTNAGG | 1 cut(s) | 291 |
| Bse3DI | GCAATG | 2 cut(s) | 882, 924 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1134 |
| BseBI | CCWGG | 2 cut(s) | 366, 868 |
| BseDI | CCNNGG | 3 cut(s) | 122, 365, 775 |
| BseGI | GGATG | 5 cut(s) | 731, 771, 929, 1318, 1401 |
| BseJI | GATNNNNATC | 1 cut(s) | 1134 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 776, 1411 |
| BseMI | GCAATG | 2 cut(s) | 882, 924 |
| BseMII | CTCAG | 5 cut(s) | 126, 282, 371, 1074, 1437 |
| BseNI | ACTGG | 3 cut(s) | 401, 1075, 1615 |
| BseRI | GAGGAG | 5 cut(s) | 87, 90, 430, 630, 637 |
| BseSI | GKGCMC | 1 cut(s) | 87 |
| BseXI | GCAGC | 5 cut(s) | 30, 111, 303, 1178, 1510 |
| BseYI | CCCAGC | 2 cut(s) | 663, 1151 |
| BsgI | GTGCAG | 1 cut(s) | 215 |
| Bsh1236I | CGCG | 1 cut(s) | 171 |
| BshFI | GGCC | 3 cut(s) | 210, 248, 1550 |
| BshTI | ACCGGT | 1 cut(s) | 216 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1086 |
| BsiSI | CCGG | 1 cut(s) | 217 |
| BslFI | GGGAC | 3 cut(s) | 246, 821, 1604 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 776, 1411 |
| BsmAI | GTCTC | 5 cut(s) | 503, 680, 1175, 1426, 1456 |
| BsmFI | GGGAC | 3 cut(s) | 246, 821, 1604 |
| BsmI | GAATGC | 3 cut(s) | 193, 306, 319 |
| BsnI | GGCC | 3 cut(s) | 210, 248, 1550 |
| Bso31I | GGTCTC | 1 cut(s) | 1426 |
| Bsp119I | TTCGAA | 1 cut(s) | 323 |
| Bsp1286I | GDGCHC | 4 cut(s) | 87, 346, 784, 1086 |
| Bsp143I | GATC | 2 cut(s) | 408, 697 |
| BspANI | GGCC | 3 cut(s) | 210, 248, 1550 |
| BspCNI | CTCAG | 5 cut(s) | 127, 283, 370, 1073, 1436 |
| BspFNI | CGCG | 1 cut(s) | 171 |
| BspLI | GGNNCC | 4 cut(s) | 120, 239, 781, 907 |
| BspMAI | CTGCAG | 1 cut(s) | 1057 |
| BspPI | GGATC | 2 cut(s) | 416, 692 |
| BspQI | GCTCTTC | 1 cut(s) | 1563 |
| BspT104I | TTCGAA | 1 cut(s) | 323 |
| BspTNI | GGTCTC | 1 cut(s) | 1426 |
| BsrDI | GCAATG | 2 cut(s) | 882, 924 |
| BsrFI | RCCGGY | 1 cut(s) | 216 |
| BsrI | ACTGG | 3 cut(s) | 401, 1075, 1615 |
| BssAI | RCCGGY | 1 cut(s) | 216 |
| BssECI | CCNNGG | 3 cut(s) | 122, 365, 775 |
| BssMI | GATC | 2 cut(s) | 408, 697 |
| BssSI | CACGAG | 1 cut(s) | 670 |
| BssT1I | CCWWGG | 1 cut(s) | 775 |
| Bst2BI | CACGAG | 1 cut(s) | 670 |
| Bst2UI | CCWGG | 2 cut(s) | 366, 868 |
| Bst4CI | ACNGT | 5 cut(s) | 107, 801, 1335, 1442, 1622 |
| Bst6I | CTCTTC | 5 cut(s) | 291, 724, 1290, 1471, 1563 |
| BstBAI | YACGTR | 1 cut(s) | 88 |
| BstBI | TTCGAA | 1 cut(s) | 323 |
| BstC8I | GCNNGC | 4 cut(s) | 346, 921, 1057, 1542 |
| BstDEI | CTNAG | 6 cut(s) | 135, 291, 357, 1060, 1139, 1423 |
| BstDSI | CCRYGG | 1 cut(s) | 122 |
| BstEII | GGTNACC | 1 cut(s) | 1355 |
| BstF5I | GGATG | 5 cut(s) | 731, 771, 929, 1318, 1401 |
| BstFNI | CGCG | 1 cut(s) | 171 |
| BstHHI | GCGC | 1 cut(s) | 306 |
| BstKTI | GATC | 2 cut(s) | 411, 700 |
| BstMAI | GTCTC | 5 cut(s) | 503, 680, 1175, 1426, 1456 |
| BstMBI | GATC | 2 cut(s) | 408, 697 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 177, 228, 350, 1154, 1163, 1172, 1238, 1541 |
| BstNI | CCWGG | 2 cut(s) | 366, 868 |
| BstNSI | RCATGY | 1 cut(s) | 1544 |
| BstPI | GGTNACC | 1 cut(s) | 1355 |
| BstSCI | CCNGG | 2 cut(s) | 364, 866 |
| BstSFI | CTRYAG | 3 cut(s) | 232, 1053, 1331 |
| BstSLI | GKGCMC | 1 cut(s) | 87 |
| BstUI | CGCG | 1 cut(s) | 171 |
| BstV1I | GCAGC | 5 cut(s) | 30, 111, 303, 1178, 1510 |
| BstV2I | GAAGAC | 1 cut(s) | 274 |
| Bsu36I | CCTNAGG | 1 cut(s) | 291 |
| BsuI | GTATCC | 1 cut(s) | 1111 |
| BsuRI | GGCC | 3 cut(s) | 210, 248, 1550 |
| BtgI | CCRYGG | 1 cut(s) | 122 |
| BtsCI | GGATG | 5 cut(s) | 731, 771, 929, 1318, 1401 |
| BtsI | GCAGTG | 1 cut(s) | 1007 |
| BtsIMutI | CAGTG | 2 cut(s) | 1007, 1447 |
| Cac8I | GCNNGC | 4 cut(s) | 346, 921, 1057, 1542 |
| CfoI | GCGC | 1 cut(s) | 306 |
| Cfr10I | RCCGGY | 1 cut(s) | 216 |
| Cfr13I | GGNCC | 4 cut(s) | 119, 139, 246, 1548 |
| CsiI | ACCWGGT | 1 cut(s) | 866 |
| Csp6I | GTAC | 3 cut(s) | 328, 864, 1618 |
| CspAI | ACCGGT | 1 cut(s) | 216 |
| CviAII | CATG | 6 cut(s) | 349, 982, 1352, 1369, 1541, 1594 |
| CviQI | GTAC | 3 cut(s) | 328, 864, 1618 |
| DdeI | CTNAG | 6 cut(s) | 135, 291, 357, 1060, 1139, 1423 |
| DpnI | GATC | 2 cut(s) | 410, 699 |
| DpnII | GATC | 2 cut(s) | 408, 697 |
| DraIII | CACNNNGTG | 1 cut(s) | 91 |
| Eam1104I | CTCTTC | 5 cut(s) | 291, 724, 1290, 1471, 1563 |
| EarI | CTCTTC | 5 cut(s) | 291, 724, 1290, 1471, 1563 |
| Ecl136II | GAGCTC | 1 cut(s) | 1084 |
| Eco130I | CCWWGG | 1 cut(s) | 775 |
| Eco24I | GRGCYC | 3 cut(s) | 346, 784, 1086 |
| Eco31I | GGTCTC | 1 cut(s) | 1426 |
| Eco47I | GGWCC | 2 cut(s) | 119, 139 |
| Eco53kI | GAGCTC | 1 cut(s) | 1084 |
| Eco57I | CTGAAG | 1 cut(s) | 131 |
| Eco72I | CACGTG | 1 cut(s) | 88 |
| Eco81I | CCTNAGG | 1 cut(s) | 291 |
| Eco91I | GGTNACC | 1 cut(s) | 1355 |
| EcoICRI | GAGCTC | 1 cut(s) | 1084 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1548 |
| EcoO65I | GGTNACC | 1 cut(s) | 1355 |
| EcoRII | CCWGG | 2 cut(s) | 364, 866 |
| EcoT14I | CCWWGG | 1 cut(s) | 775 |
| EcoT22I | ATGCAT | 2 cut(s) | 1234, 1374 |
| EcoT38I | GRGCYC | 3 cut(s) | 346, 784, 1086 |
| ErhI | CCWWGG | 1 cut(s) | 775 |
| FaeI | CATG | 6 cut(s) | 352, 985, 1355, 1372, 1544, 1597 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1560, 1592 |
| FaqI | GGGAC | 3 cut(s) | 246, 821, 1604 |
| FatI | CATG | 6 cut(s) | 348, 981, 1351, 1368, 1540, 1593 |
| FauI | CCCGC | 3 cut(s) | 772, 947, 1011 |
| FblI | GTMKAC | 1 cut(s) | 1337 |
| FokI | GGATG | 5 cut(s) | 718, 758, 916, 1325, 1388 |
| FriOI | GRGCYC | 3 cut(s) | 346, 784, 1086 |
| FspBI | CTAG | 3 cut(s) | 1163, 1545, 1554 |
| GlaI | GCGC | 1 cut(s) | 305 |
| GsaI | CCCAGC | 2 cut(s) | 667, 1155 |
| HaeIII | GGCC | 3 cut(s) | 210, 248, 1550 |
| HapII | CCGG | 1 cut(s) | 217 |
| HhaI | GCGC | 1 cut(s) | 306 |
| Hin1II | CATG | 6 cut(s) | 352, 985, 1355, 1372, 1544, 1597 |
| Hin6I | GCGC | 1 cut(s) | 304 |
| HinP1I | GCGC | 1 cut(s) | 304 |
| HincII | GTYRAC | 1 cut(s) | 900 |
| HindII | GTYRAC | 1 cut(s) | 900 |
| HindIII | AAGCTT | 1 cut(s) | 1239 |
| HinfI | GANTC | 5 cut(s) | 59, 673, 809, 1183, 1415 |
| HpaII | CCGG | 1 cut(s) | 217 |
| HphI | GGTGA | 4 cut(s) | 535, 706, 742, 1349 |
| Hpy166II | GTNNAC | 3 cut(s) | 126, 900, 1338 |
| Hpy188I | TCNGA | 6 cut(s) | 111, 958, 1036, 1081, 1414, 1426 |
| Hpy188III | TCNNGA | 6 cut(s) | 290, 311, 388, 412, 806, 1562 |
| Hpy8I | GTNNAC | 3 cut(s) | 126, 900, 1338 |
| Hpy99I | CGWCG | 3 cut(s) | 71, 107, 1181 |
| HpyAV | CCTTC | 7 cut(s) | 109, 694, 733, 757, 763, 1098, 1416 |
| HpyCH4III | ACNGT | 5 cut(s) | 107, 801, 1335, 1442, 1622 |
| HpyCH4IV | ACGT | 1 cut(s) | 87 |
| HpyCH4V | TGCA | 7 cut(s) | 196, 319, 929, 1055, 1232, 1372, 1498 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 177, 228, 350, 1154, 1163, 1172, 1238, 1541 |
| HpyF3I | CTNAG | 6 cut(s) | 135, 291, 357, 1060, 1139, 1423 |
| HpySE526I | ACGT | 1 cut(s) | 87 |
| Hsp92II | CATG | 6 cut(s) | 352, 985, 1355, 1372, 1544, 1597 |
| HspAI | GCGC | 1 cut(s) | 304 |
| Kzo9I | GATC | 2 cut(s) | 408, 697 |
| LguI | GCTCTTC | 1 cut(s) | 1563 |
| LmnI | GCTCC | 9 cut(s) | 28, 243, 779, 839, 911, 1081, 1089, 1349, 1537 |
| Lsp1109I | GCAGC | 5 cut(s) | 30, 111, 303, 1178, 1510 |
| LweI | GCATC | 3 cut(s) | 938, 1219, 1516 |
| MabI | ACCWGGT | 1 cut(s) | 866 |
| MaeI | CTAG | 3 cut(s) | 1163, 1545, 1554 |
| MaeII | ACGT | 1 cut(s) | 87 |
| MaeIII | GTNAC | 3 cut(s) | 360, 1355, 1436 |
| MalI | GATC | 2 cut(s) | 410, 699 |
| MboI | GATC | 2 cut(s) | 408, 697 |
| MboII | GAAGA | 9 cut(s) | 124, 274, 283, 308, 711, 1307, 1458, 1577, 1580 |
| MfeI | CAATTG | 1 cut(s) | 181 |
| MhlI | GDGCHC | 4 cut(s) | 87, 346, 784, 1086 |
| MluCI | AATT | 5 cut(s) | 181, 391, 1039, 1258, 1363 |
| MlyI | GAGTC | 4 cut(s) | 682, 803, 1177, 1424 |
| MmeI | TCCRAC | 6 cut(s) | 559, 933, 1059, 1059, 1185, 1290 |
| Mph1103I | ATGCAT | 2 cut(s) | 1234, 1374 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1258 |
| MseI | TTAA | 5 cut(s) | 149, 456, 1362, 1607, 1624 |
| MspA1I | CMGCKG | 1 cut(s) | 1535 |
| MspI | CCGG | 1 cut(s) | 217 |
| MspR9I | CCNGG | 2 cut(s) | 366, 868 |
| MunI | CAATTG | 1 cut(s) | 181 |
| Mva1269I | GAATGC | 3 cut(s) | 193, 306, 319 |
| MvaI | CCWGG | 2 cut(s) | 366, 868 |
| MvnI | CGCG | 1 cut(s) | 171 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 177, 228, 350, 1154, 1163, 1172, 1238, 1541 |
| NdeII | GATC | 2 cut(s) | 408, 697 |
| NlaIII | CATG | 6 cut(s) | 352, 985, 1355, 1372, 1544, 1597 |
| NlaIV | GGNNCC | 4 cut(s) | 120, 239, 781, 907 |
| NmeAIII | GCCGAG | 1 cut(s) | 1124 |
| NmuCI | GTSAC | 2 cut(s) | 1355, 1436 |
| NsiI | ATGCAT | 2 cut(s) | 1234, 1374 |
| NspI | RCATGY | 1 cut(s) | 1544 |
| NspV | TTCGAA | 1 cut(s) | 323 |
| PaeI | GCATGC | 1 cut(s) | 1544 |
| PciSI | GCTCTTC | 1 cut(s) | 1563 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1032 |
| PctI | GAATGC | 3 cut(s) | 193, 306, 319 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1258 |
| PfeI | GAWTC | 1 cut(s) | 59 |
| PinAI | ACCGGT | 1 cut(s) | 216 |
| PleI | GAGTC | 4 cut(s) | 681, 803, 1177, 1423 |
| PmaCI | CACGTG | 1 cut(s) | 88 |
| PmlI | CACGTG | 1 cut(s) | 88 |
| PpsI | GAGTC | 4 cut(s) | 681, 803, 1177, 1423 |
| Ppu21I | YACGTR | 1 cut(s) | 88 |
| Psp124BI | GAGCTC | 1 cut(s) | 1086 |
| Psp6I | CCWGG | 2 cut(s) | 364, 866 |
| PspCI | CACGTG | 1 cut(s) | 88 |
| PspEI | GGTNACC | 1 cut(s) | 1355 |
| PspFI | CCCAGC | 2 cut(s) | 663, 1151 |
| PspGI | CCWGG | 2 cut(s) | 364, 866 |
| PspN4I | GGNNCC | 4 cut(s) | 120, 239, 781, 907 |
| PspPI | GGNCC | 4 cut(s) | 119, 139, 246, 1548 |
| PstI | CTGCAG | 1 cut(s) | 1057 |
| RsaI | GTAC | 3 cut(s) | 329, 865, 1619 |
| RsaNI | GTAC | 3 cut(s) | 328, 864, 1618 |
| SacI | GAGCTC | 1 cut(s) | 1086 |
| SapI | GCTCTTC | 1 cut(s) | 1563 |
| SaqAI | TTAA | 5 cut(s) | 149, 456, 1362, 1607, 1624 |
| Sau3AI | GATC | 2 cut(s) | 408, 697 |
| Sau96I | GGNCC | 4 cut(s) | 119, 139, 246, 1548 |
| SchI | GAGTC | 4 cut(s) | 682, 803, 1177, 1424 |
| ScrFI | CCNGG | 2 cut(s) | 366, 868 |
| SduI | GDGCHC | 4 cut(s) | 87, 346, 784, 1086 |
| SexAI | ACCWGGT | 1 cut(s) | 866 |
| SfaNI | GCATC | 3 cut(s) | 938, 1219, 1516 |
| SfcI | CTRYAG | 3 cut(s) | 232, 1053, 1331 |
| SfuI | TTCGAA | 1 cut(s) | 323 |
| SinI | GGWCC | 2 cut(s) | 119, 139 |
| SmlI | CTYRAG | 2 cut(s) | 311, 1115 |
| SmoI | CTYRAG | 2 cut(s) | 311, 1115 |
| SphI | GCATGC | 1 cut(s) | 1544 |
| Sse9I | AATT | 5 cut(s) | 181, 391, 1039, 1258, 1363 |
| SspMI | CTAG | 3 cut(s) | 1163, 1545, 1554 |
| SstI | GAGCTC | 1 cut(s) | 1086 |
| StyD4I | CCNGG | 2 cut(s) | 364, 866 |
| StyI | CCWWGG | 1 cut(s) | 775 |
| TaaI | ACNGT | 5 cut(s) | 107, 801, 1335, 1442, 1622 |
| TaiI | ACGT | 1 cut(s) | 90 |
| TaqI | TCGA | 6 cut(s) | 62, 323, 950, 990, 1026, 1511 |
| TaqII | GACCGA | 1 cut(s) | 1408 |
| TasI | AATT | 5 cut(s) | 181, 391, 1039, 1258, 1363 |
| TatI | WGTACW | 1 cut(s) | 1617 |
| TauI | GCSGC | 7 cut(s) | 55, 134, 174, 225, 1151, 1172, 1175 |
| TfiI | GAWTC | 1 cut(s) | 59 |
| Tru1I | TTAA | 5 cut(s) | 149, 456, 1362, 1607, 1624 |
| Tru9I | TTAA | 5 cut(s) | 149, 456, 1362, 1607, 1624 |
| TscAI | CASTG | 2 cut(s) | 1014, 1447 |
| TseFI | GTSAC | 2 cut(s) | 1355, 1436 |
| TseI | GCWGC | 5 cut(s) | 18, 99, 316, 1166, 1498 |
| Tsp45I | GTSAC | 2 cut(s) | 1355, 1436 |
| TspDTI | ATGAA | 4 cut(s) | 1278, 1340, 1398, 1610 |
| TspGWI | ACGGA | 6 cut(s) | 84, 111, 230, 248, 851, 1336 |
| TspRI | CASTG | 2 cut(s) | 1014, 1447 |
| VpaK11BI | GGWCC | 2 cut(s) | 119, 139 |
| XceI | RCATGY | 1 cut(s) | 1544 |
| XmiI | GTMKAC | 1 cut(s) | 1337 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1258 |
| XspI | CTAG | 3 cut(s) | 1163, 1545, 1554 |
| Zsp2I | ATGCAT | 2 cut(s) | 1234, 1374 |