Prupe.4G248800_v2.0.a1

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
16628386 .. 16633932
5547 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G248800.5

Sequence Viewer

Length: 1713 bp
ATGGCTGAAGAAGATGATTCATATTCCAATGGGAACAAAAGCAAAACTCCTATCTACATTTTATTCAAGGATTGCAGGTTTGTTTTTAATTTGGACAAACTTGGCTTAGAAATAGCGTCGATTGCATTGCCTGCAGCACTGGCTTTGACAGCCGATCCAATTGCTTCTCTAGTTGACACAGCATTCATTGGTCAAATAGGTCCAGTGGAGCTTGCTGCTGTAGGAGTTTCTATCGCTTTGTTCAATCAAGCATCAAGAATTGCAATATTCCCTCTTGTTAGTGTCACAACCTCTTTTGTTGCTGAAGAAGATACTATTGGAACAGCGAGTCCCGAGGAAAATCAGAATGATTACCTGGAAACAGGTTCATCAATCAATGGTGAAACTAGACAGTTGATCCCAGAAAGGGGTACTGATCAGAATGCATACAACTCAAAACCAGTTGGTGCAAGCTTTGAAATAGTTACAACCAATCATCAAAAGAGGTACATCCCGTCAGCGTCATCAGCAATGGTTATTGGCAGCATCCTTGGCCTCATCCAAGCCATATTCCTCATATCAGCAGCAAAACCTCTATTGAACTTTATGGGGGTCAGTTCTGATTCCCCTATGCTAAAACCTGCACAGCAGTACTTGATCCTGAGGTCGCTTGGTGCTCCTGCAGTTCTTCTTTCACTGGCTATGCAAGGGGTCTTCCGTGGGTTCAAGGATACAAAAACTCCTTTATATGCAACCGTGGCAGGAGATGTTACAAATATAATTTTAGATCCAATATTTATGTTTGTTTTCCGTCTGGGTGTCAATGGTGCAGCTATTTCTCATGTTATATCTCAGTACTTAATATGTGTCATACTCTTGTGGAGATTAATGGCTCAAGTTGATCTATTACCCCCAAGTATCAAACATCTCCAATTTGGTCGGTTTCTTAAAAATGGTTTTCTTTTATTAATGAGGGTCATTGCTGTCACATTCTGTGTAACTCTGGCTGCATCATTGGCTGCGCGGCAGGGACCGACACCCATGGCCGCATTTCAGGTCTGCTTGCAGGTTTGGTTGGCAACTTCCCTTCTAGCTGATGGACTGGCTGTTGCTGGACAGGCAATACTTGCTAGTGCATTTGCAAAAAAAGACCATGACAAGGCAACAGCCACGGCGTCACGAGTGTTACAGTTGGGATTGGTTTTGGGGTTGATGCTCGCAGTCATACTTGGAGTAGGGTTGCAGTATGGGGCAAGGCTATTTACAAAAGATGTCGATGTCCTACATCTTATCAGCATAGGCATTCCGTTTGTTGCAGCTACTCAACCCATCAATGCCTTGGCCTTTGTTTTTGATGGTGTCAACTTTGGAGCATCTGATTTTGCATATTCAGCCTTTTCCATGGTTATGGTGGCTATTGTCAGCATCTTTGTTTTGTTTATTCTCTCCTCTACCAATGGATTCATTGGAATCTGGGTTGCTTTGACCATCTATATGAGTCTTCGAGCATTTGCCGGATTTTGGAGGTATGTTTTACAAAATTTAGTACATACAAGCATGCTCACACACACACACAAAATTTTACTTGCCCAAACGGACCATTTTGCTATGGAATTTCAGGATAGGGACAGGAACAGGACCTTGGGAATTCCTACGGGCGTAAATGGACGCTGGTTTACTCAATTGGAAGTTCAAGAGTTTCTTTGCTTCCATTGTTGCATGATTTCGACTTGA

Protein Analysis

571

Amino Acids

61.7

Weight (kDa)

6.55

Isoelectric Point (pI)

25.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 66, 628, 1036
AccII CGCG 1 cut(s) 1003
AciI CCGC 2 cut(s) 1003, 1026
AclWI GGATC 4 cut(s) 149, 391, 631, 761
AcoI YGGCCR 1 cut(s) 1023
AcsI RAATTY 4 cut(s) 1519, 1557, 1592, 1626
AcuI CTGAAG 2 cut(s) 27, 324
AcyI GRCGYC 1 cut(s) 1154
AfaI GTAC 5 cut(s) 412, 488, 632, 836, 1527
AfiI CCNNNNNNNGG 4 cut(s) 406, 407, 1138, 1500
AgsI TTSAA 6 cut(s) 67, 244, 458, 580, 706, 1673
AjnI CCWGG 1 cut(s) 354
AjuI GAANNNNNNNTTGG 4 cut(s) 300, 332, 1604, 1636
AloI GAACNNNNNNTCC 2 cut(s) 313, 345
AluBI AGCT 5 cut(s) 211, 453, 812, 1073, 1298
AluI AGCT 5 cut(s) 211, 453, 812, 1073, 1298
Alw21I GWGCWC 1 cut(s) 658
AlwI GGATC 4 cut(s) 149, 391, 631, 761
Ama87I CYCGRG 1 cut(s) 332
AoxI GGCC 3 cut(s) 532, 1023, 1320
ApeKI GCWGC 8 cut(s) 134, 215, 522, 563, 809, 986, 998, 1295
ApoI RAATTY 4 cut(s) 1519, 1557, 1592, 1626
AseI ATTAAT 2 cut(s) 866, 947
AspLEI GCGC 1 cut(s) 1003
AspS9I GGNCC 4 cut(s) 200, 1010, 1576, 1617
AsuHPI GGTGA 1 cut(s) 392
AvaI CYCGRG 1 cut(s) 332
AvaII GGWCC 4 cut(s) 200, 1010, 1576, 1617
AxyI CCTNAGG 1 cut(s) 641
BauI CACGAG 1 cut(s) 1158
BbsI GAAGAC 2 cut(s) 685, 1472
Bbv12I GWGCWC 1 cut(s) 658
BbvI GCAGC 8 cut(s) 146, 202, 534, 575, 821, 973, 985, 1307
BccI CCATC 4 cut(s) 1070, 1316, 1328, 1475
BceAI ACGGC 1 cut(s) 1167
BcgI CGANNNNNNTGC 4 cut(s) 109, 143, 143, 177
BciT130I CCWGG 1 cut(s) 356
BciVI GTATCC 1 cut(s) 703
BclI TGATCA 1 cut(s) 415
BfaI CTAG 4 cut(s) 170, 387, 1070, 1110
BfmI CTRYAG 3 cut(s) 132, 219, 660
BfuAI ACCTGC 3 cut(s) 66, 628, 1036
BfuI GTATCC 1 cut(s) 703
BmcAI AGTACT 2 cut(s) 632, 836
Bme1390I CCNGG 1 cut(s) 356
Bme18I GGWCC 4 cut(s) 200, 1010, 1576, 1617
BmeT110I CYCGRG 1 cut(s) 332
BmgT120I GGNCC 4 cut(s) 200, 1010, 1576, 1617
BmiI GGNNCC 1 cut(s) 1011
BmrFI CCNGG 1 cut(s) 356
BmsI GCATC 6 cut(s) 260, 534, 998, 1182, 1361, 1413
BpiI GAAGAC 2 cut(s) 685, 1472
BpuEI CTTGAG 1 cut(s) 858
BsaHI GRCGYC 1 cut(s) 1154
BsaJI CCNNGG 9 cut(s) 333, 529, 697, 735, 1020, 1149, 1317, 1380, 1620
BsaXI ACNNNNNCTCC 2 cut(s) 703, 733
Bsc4I CCNNNNNNNGG 4 cut(s) 406, 407, 1138, 1500
Bse1I ACTGG 5 cut(s) 144, 203, 440, 681, 1086
Bse21I CCTNAGG 1 cut(s) 641
Bse3DI GCAATG 3 cut(s) 125, 516, 957
BseBI CCWGG 1 cut(s) 356
BseDI CCNNGG 9 cut(s) 333, 529, 697, 735, 1020, 1149, 1317, 1380, 1620
BseGI GGATG 3 cut(s) 489, 525, 537
BseLI CCNNNNNNNGG 4 cut(s) 406, 407, 1138, 1500
BseMI GCAATG 3 cut(s) 125, 516, 957
BseMII CTCAG 2 cut(s) 632, 845
BseNI ACTGG 5 cut(s) 144, 203, 440, 681, 1086
BseRI GAGGAG 1 cut(s) 1417
BseXI GCAGC 8 cut(s) 146, 202, 534, 575, 821, 973, 985, 1307
BsgI GTGCAG 2 cut(s) 606, 828
Bsh1236I CGCG 1 cut(s) 1003
BshFI GGCC 3 cut(s) 534, 1025, 1322
BsiHKAI GWGCWC 1 cut(s) 658
BsiHKCI CYCGRG 1 cut(s) 332
BsiSI CCGG 1 cut(s) 1494
BslFI GGGAC 3 cut(s) 315, 1023, 1619
BslI CCNNNNNNNGG 4 cut(s) 406, 407, 1138, 1500
BsmFI GGGAC 3 cut(s) 315, 1023, 1619
BsmI GAATGC 3 cut(s) 182, 427, 1281
BsnI GGCC 3 cut(s) 534, 1025, 1322
BsoBI CYCGRG 1 cut(s) 332
Bsp1286I GDGCHC 1 cut(s) 658
Bsp143I GATC 6 cut(s) 154, 396, 415, 636, 766, 880
Bsp19I CCATGG 2 cut(s) 1020, 1380
BspACI CCGC 2 cut(s) 1003, 1026
BspANI GGCC 3 cut(s) 534, 1025, 1322
BspCNI CTCAG 2 cut(s) 633, 844
BspFNI CGCG 1 cut(s) 1003
BspLI GGNNCC 1 cut(s) 1011
BspMAI CTGCAG 2 cut(s) 136, 664
BspMI ACCTGC 3 cut(s) 66, 628, 1036
BspPI GGATC 4 cut(s) 149, 391, 631, 761
BsrDI GCAATG 3 cut(s) 125, 516, 957
BsrI ACTGG 5 cut(s) 144, 203, 440, 681, 1086
BssECI CCNNGG 9 cut(s) 333, 529, 697, 735, 1020, 1149, 1317, 1380, 1620
BssMI GATC 6 cut(s) 154, 396, 415, 636, 766, 880
BssNI GRCGYC 1 cut(s) 1154
BssSI CACGAG 1 cut(s) 1158
BssT1I CCWWGG 5 cut(s) 529, 1020, 1317, 1380, 1620
Bst2BI CACGAG 1 cut(s) 1158
Bst2UI CCWGG 1 cut(s) 356
Bst4CI ACNGT 3 cut(s) 393, 736, 1170
BstACI GRCGYC 1 cut(s) 1154
BstAPI GCANNNNNTGC 2 cut(s) 131, 1106
BstC8I GCNNGC 6 cut(s) 132, 213, 451, 1043, 1197, 1538
BstDEI CTNAG 3 cut(s) 106, 641, 831
BstDSI CCRYGG 5 cut(s) 697, 735, 1020, 1149, 1380
BstF5I GGATG 3 cut(s) 489, 525, 537
BstFNI CGCG 1 cut(s) 1003
BstHHI GCGC 1 cut(s) 1003
BstKTI GATC 6 cut(s) 157, 399, 418, 639, 769, 883
BstMBI GATC 6 cut(s) 154, 396, 415, 636, 766, 880
BstNI CCWGG 1 cut(s) 356
BstNSI RCATGY 1 cut(s) 1540
BstSCI CCNGG 1 cut(s) 354
BstSFI CTRYAG 3 cut(s) 132, 219, 660
BstUI CGCG 1 cut(s) 1003
BstV1I GCAGC 8 cut(s) 146, 202, 534, 575, 821, 973, 985, 1307
BstV2I GAAGAC 2 cut(s) 685, 1472
BstX2I RGATCY 1 cut(s) 766
BstXI CCANNNNNNTGG 1 cut(s) 1387
BstYI RGATCY 1 cut(s) 766
Bsu36I CCTNAGG 1 cut(s) 641
BsuI GTATCC 1 cut(s) 703
BsuRI GGCC 3 cut(s) 534, 1025, 1322
BtgI CCRYGG 5 cut(s) 697, 735, 1020, 1149, 1380
BtsCI GGATG 3 cut(s) 489, 525, 537
BtsIMutI CAGTG 3 cut(s) 137, 210, 674
BveI ACCTGC 3 cut(s) 66, 628, 1036
Cac8I GCNNGC 6 cut(s) 132, 213, 451, 1043, 1197, 1538
CfoI GCGC 1 cut(s) 1003
Cfr13I GGNCC 4 cut(s) 200, 1010, 1576, 1617
CseI GACGC 4 cut(s) 105, 489, 1143, 1656
Csp6I GTAC 5 cut(s) 411, 487, 631, 835, 1526
CviAII CATG 6 cut(s) 821, 1021, 1133, 1381, 1537, 1699
CviQI GTAC 5 cut(s) 411, 487, 631, 835, 1526
DdeI CTNAG 3 cut(s) 106, 641, 831
DpnI GATC 6 cut(s) 156, 398, 417, 638, 768, 882
DpnII GATC 6 cut(s) 154, 396, 415, 636, 766, 880
EaeI YGGCCR 1 cut(s) 1023
Eco130I CCWWGG 5 cut(s) 529, 1020, 1317, 1380, 1620
Eco47I GGWCC 4 cut(s) 200, 1010, 1576, 1617
Eco57I CTGAAG 2 cut(s) 27, 324
Eco81I CCTNAGG 1 cut(s) 641
Eco88I CYCGRG 1 cut(s) 332
EcoO109I RGGNCCY 1 cut(s) 1617
EcoRI GAATTC 1 cut(s) 1626
EcoRII CCWGG 1 cut(s) 354
EcoT14I CCWWGG 5 cut(s) 529, 1020, 1317, 1380, 1620
EcoT22I ATGCAT 1 cut(s) 427
ErhI CCWWGG 5 cut(s) 529, 1020, 1317, 1380, 1620
FaeI CATG 6 cut(s) 824, 1024, 1136, 1384, 1540, 1702
FalI AAGNNNNNCTT 2 cut(s) 1665, 1697
FaqI GGGAC 3 cut(s) 315, 1023, 1619
FatI CATG 6 cut(s) 820, 1020, 1132, 1380, 1536, 1698
FbaI TGATCA 1 cut(s) 415
FokI GGATG 3 cut(s) 476, 512, 524
FspBI CTAG 4 cut(s) 170, 387, 1070, 1110
GlaI GCGC 1 cut(s) 1002
HaeIII GGCC 3 cut(s) 534, 1025, 1322
HapII CCGG 1 cut(s) 1494
HgaI GACGC 4 cut(s) 105, 489, 1143, 1656
HhaI GCGC 1 cut(s) 1003
Hin1I GRCGYC 1 cut(s) 1154
Hin1II CATG 6 cut(s) 824, 1024, 1136, 1384, 1540, 1702
Hin6I GCGC 1 cut(s) 1001
HinP1I GCGC 1 cut(s) 1001
HincII GTYRAC 2 cut(s) 175, 1342
HindII GTYRAC 2 cut(s) 175, 1342
HindIII AAGCTT 1 cut(s) 451
HinfI GANTC 6 cut(s) 17, 328, 602, 1440, 1449, 1477
HpaII CCGG 1 cut(s) 1494
HphI GGTGA 1 cut(s) 392
Hpy166II GTNNAC 3 cut(s) 175, 1342, 1656
Hpy188I TCNGA 4 cut(s) 345, 420, 601, 1357
Hpy188III TCNNGA 6 cut(s) 255, 332, 640, 1158, 1598, 1673
Hpy8I GTNNAC 3 cut(s) 175, 1342, 1656
Hpy99I CGWCG 1 cut(s) 121
HpyAV CCTTC 1 cut(s) 1076
HpyCH4III ACNGT 3 cut(s) 393, 736, 1170
HpyF3I CTNAG 3 cut(s) 106, 641, 831
Hsp92I GRCGYC 1 cut(s) 1154
Hsp92II CATG 6 cut(s) 824, 1024, 1136, 1384, 1540, 1702
HspAI GCGC 1 cut(s) 1001
Ksp22I TGATCA 1 cut(s) 415
Kzo9I GATC 6 cut(s) 154, 396, 415, 636, 766, 880
LmnI GCTCC 3 cut(s) 208, 661, 1349
Lsp1109I GCAGC 8 cut(s) 146, 202, 534, 575, 821, 973, 985, 1307
LweI GCATC 6 cut(s) 260, 534, 998, 1182, 1361, 1413
MaeI CTAG 4 cut(s) 170, 387, 1070, 1110
MaeIII GTNAC 7 cut(s) 283, 463, 748, 964, 976, 1155, 1164
MalI GATC 6 cut(s) 156, 398, 417, 638, 768, 882
MboI GATC 6 cut(s) 154, 396, 415, 636, 766, 880
MboII GAAGA 7 cut(s) 20, 23, 317, 320, 659, 685, 1472
MfeI CAATTG 2 cut(s) 159, 1661
MflI RGATCY 1 cut(s) 766
MhlI GDGCHC 1 cut(s) 658
MlyI GAGTC 2 cut(s) 337, 1486
Mph1103I ATGCAT 1 cut(s) 427
MseI TTAA 5 cut(s) 87, 839, 866, 927, 947
MslI CAYNNNNRTG 2 cut(s) 1385, 1472
MspI CCGG 1 cut(s) 1494
MspR9I CCNGG 1 cut(s) 356
MunI CAATTG 2 cut(s) 159, 1661
Mva1269I GAATGC 3 cut(s) 182, 427, 1281
MvaI CCWGG 1 cut(s) 356
MvnI CGCG 1 cut(s) 1003
NcoI CCATGG 2 cut(s) 1020, 1380
NdeII GATC 6 cut(s) 154, 396, 415, 636, 766, 880
NlaIII CATG 6 cut(s) 824, 1024, 1136, 1384, 1540, 1702
NlaIV GGNNCC 1 cut(s) 1011
NmuCI GTSAC 3 cut(s) 283, 964, 1155
NsiI ATGCAT 1 cut(s) 427
NspI RCATGY 1 cut(s) 1540
PaeI GCATGC 1 cut(s) 1540
PctI GAATGC 3 cut(s) 182, 427, 1281
PfeI GAWTC 4 cut(s) 17, 602, 1440, 1449
PleI GAGTC 2 cut(s) 336, 1485
PpsI GAGTC 2 cut(s) 336, 1485
PpuMI RGGWCCY 1 cut(s) 1617
PshBI ATTAAT 2 cut(s) 866, 947
Psp5II RGGWCCY 1 cut(s) 1617
Psp6I CCWGG 1 cut(s) 354
PspGI CCWGG 1 cut(s) 354
PspN4I GGNNCC 1 cut(s) 1011
PspPI GGNCC 4 cut(s) 200, 1010, 1576, 1617
PspPPI RGGWCCY 1 cut(s) 1617
PstI CTGCAG 2 cut(s) 136, 664
PsuI RGATCY 1 cut(s) 766
RsaI GTAC 5 cut(s) 412, 488, 632, 836, 1527
RsaNI GTAC 5 cut(s) 411, 487, 631, 835, 1526
RseI CAYNNNNRTG 2 cut(s) 1385, 1472
SaqAI TTAA 5 cut(s) 87, 839, 866, 927, 947
Sau3AI GATC 6 cut(s) 154, 396, 415, 636, 766, 880
Sau96I GGNCC 4 cut(s) 200, 1010, 1576, 1617
ScaI AGTACT 2 cut(s) 632, 836
SchI GAGTC 2 cut(s) 337, 1486
ScrFI CCNGG 1 cut(s) 356
SduI GDGCHC 1 cut(s) 658
SfaNI GCATC 6 cut(s) 260, 534, 998, 1182, 1361, 1413
SfcI CTRYAG 3 cut(s) 132, 219, 660
SinI GGWCC 4 cut(s) 200, 1010, 1576, 1617
SmiMI CAYNNNNRTG 2 cut(s) 1385, 1472
SmlI CTYRAG 1 cut(s) 873
SmoI CTYRAG 1 cut(s) 873
SphI GCATGC 1 cut(s) 1540
SsiI CCGC 2 cut(s) 1003, 1026
SspI AATATT 2 cut(s) 267, 774
SspMI CTAG 4 cut(s) 170, 387, 1070, 1110
StyD4I CCNGG 1 cut(s) 354
StyI CCWWGG 5 cut(s) 529, 1020, 1317, 1380, 1620
TaaI ACNGT 3 cut(s) 393, 736, 1170
TaqI TCGA 4 cut(s) 119, 1254, 1483, 1706
TaqII GACCGA 1 cut(s) 1027
TatI WGTACW 3 cut(s) 630, 834, 1525
TauI GCSGC 2 cut(s) 1006, 1028
TfiI GAWTC 4 cut(s) 17, 602, 1440, 1449
Tru1I TTAA 5 cut(s) 87, 839, 866, 927, 947
Tru9I TTAA 5 cut(s) 87, 839, 866, 927, 947
TscAI CASTG 3 cut(s) 144, 210, 681
TseFI GTSAC 3 cut(s) 283, 964, 1155
TseI GCWGC 8 cut(s) 134, 215, 522, 563, 809, 986, 998, 1295
Tsp45I GTSAC 3 cut(s) 283, 964, 1155
TspDTI ATGAA 4 cut(s) 9, 175, 357, 1432
TspGWI ACGGA 4 cut(s) 686, 779, 1275, 1589
TspRI CASTG 3 cut(s) 144, 210, 681
VpaK11BI GGWCC 4 cut(s) 200, 1010, 1576, 1617
VspI ATTAAT 2 cut(s) 866, 947
XapI RAATTY 4 cut(s) 1519, 1557, 1592, 1626
XceI RCATGY 1 cut(s) 1540
XcmI CCANNNNNNNNNTGG 2 cut(s) 1315, 1387
XspI CTAG 4 cut(s) 170, 387, 1070, 1110
ZrmI AGTACT 2 cut(s) 632, 836
Zsp2I ATGCAT 1 cut(s) 427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.