Encoded by
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05858 AT5G26620 |
| fragaria_vesca | FvH4_4g21750 FvH4_6g08530 |
| malus_domestica | MD04G1186400.v1.1 MD13G1137300.v1.1 MD13G1137400.v1.1 MD16G1133300.v1.1 |
| prunus_persica | Prupe.1G207900_v2.0.a1 Prupe.4G278700_v2.0.a1 Prupe.6G304200_v2.0.a1 Prupe.6G304300_v2.0.a1 |
| pyrus_communis | pycom04g16470 pycom12g18640 |
| rosa_chinensis | RchiOBHm_Chr1g0321401 RchiOBHm_Chr3g0458591 RchiOBHm_Chr4g0427981 |
| rosa_multiflora | Rmu_co8422555.1_g000001 Rmu_sc0000066.1_g000008 Rmu_sc0000724.1_g000012 Rmu_sc0001634.1_g000005 Rmu_sc0004404.1_g000003 |
| rosa_roxburghii | Rroxscaffold_160G00434010 Rroxscaffold_4G00327780 Rroxscaffold_5G00369640 Rroxscaffold_6G00420960 |
| rosa_rugosa | Rorug03G0030000 Rorug04G0220800 |
| rosa_samantha | Rh1AG044500 Rh1BG042400 Rh3AG088300 Rh3BG091200 Rh3CG091400 Rh3DG092200 Rh4AG278200 Rh4AG423300 Rh4BG283700 Rh4BG435300 Rh4CG299400 Rh4DG281000 Rh4DG431600 |
| rosa_wichuraiana | Rw3G007540 Rw4G024180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 128 |
| AciI | CCGC | 1 cut(s) | 105 |
| AcuI | CTGAAG | 1 cut(s) | 34 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 80, 115 |
| AgsI | TTSAA | 1 cut(s) | 61 |
| AluBI | AGCT | 3 cut(s) | 54, 182, 206 |
| AluI | AGCT | 3 cut(s) | 54, 182, 206 |
| AoxI | GGCC | 1 cut(s) | 71 |
| ApeKI | GCWGC | 2 cut(s) | 206, 209 |
| AsuC2I | CCSGG | 1 cut(s) | 189 |
| AsuHPI | GGTGA | 1 cut(s) | 98 |
| BanII | GRGCYC | 1 cut(s) | 189 |
| BbvI | GCAGC | 2 cut(s) | 193, 196 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 188, 222 |
| BcnI | CCSGG | 1 cut(s) | 189 |
| BisI | GCNGC | 2 cut(s) | 207, 210 |
| BlpI | GCTNAGC | 1 cut(s) | 183 |
| BlsI | GCNGC | 2 cut(s) | 208, 211 |
| Bme1390I | CCNGG | 1 cut(s) | 189 |
| BmrFI | CCNGG | 1 cut(s) | 189 |
| BoxI | GACNNNNGTC | 1 cut(s) | 168 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 58, 90 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 183 |
| BpuMI | CCSGG | 1 cut(s) | 189 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 110, 140 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 80, 115 |
| Bse3DI | GCAATG | 1 cut(s) | 237 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 80, 115 |
| BseMI | GCAATG | 1 cut(s) | 237 |
| BseMII | CTCAG | 1 cut(s) | 174 |
| BseRI | GAGGAG | 5 cut(s) | 22, 25, 28, 31, 82 |
| BseXI | GCAGC | 2 cut(s) | 193, 196 |
| BshFI | GGCC | 1 cut(s) | 73 |
| BsiSI | CCGG | 1 cut(s) | 189 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 80, 115 |
| BsnI | GGCC | 1 cut(s) | 73 |
| Bsp1286I | GDGCHC | 1 cut(s) | 189 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 183 |
| BspACI | CCGC | 1 cut(s) | 105 |
| BspANI | GGCC | 1 cut(s) | 73 |
| BspCNI | CTCAG | 1 cut(s) | 175 |
| BsrDI | GCAATG | 1 cut(s) | 237 |
| BssNAI | GTATAC | 1 cut(s) | 129 |
| Bst1107I | GTATAC | 1 cut(s) | 129 |
| BstDEI | CTNAG | 1 cut(s) | 183 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 104 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 168 |
| BstSCI | CCNGG | 1 cut(s) | 187 |
| BstV1I | GCAGC | 2 cut(s) | 193, 196 |
| BstZ17I | GTATAC | 1 cut(s) | 129 |
| BsuRI | GGCC | 1 cut(s) | 73 |
| CseI | GACGC | 1 cut(s) | 231 |
| CviAII | CATG | 1 cut(s) | 100 |
| CviJI | RGCY | 6 cut(s) | 54, 73, 98, 182, 187, 206 |
| CviKI_1 | RGCY | 6 cut(s) | 54, 73, 98, 182, 187, 206 |
| DdeI | CTNAG | 1 cut(s) | 183 |
| EciI | GGCGGA | 1 cut(s) | 94 |
| Eco147I | AGGCCT | 1 cut(s) | 73 |
| Eco24I | GRGCYC | 1 cut(s) | 189 |
| Eco57I | CTGAAG | 1 cut(s) | 34 |
| EcoT38I | GRGCYC | 1 cut(s) | 189 |
| FaeI | CATG | 1 cut(s) | 103 |
| FaiI | YATR | 4 cut(s) | 101, 129, 153, 252 |
| FatI | CATG | 1 cut(s) | 99 |
| FblI | GTMKAC | 1 cut(s) | 128 |
| Fnu4HI | GCNGC | 2 cut(s) | 207, 210 |
| FriOI | GRGCYC | 1 cut(s) | 189 |
| Fsp4HI | GCNGC | 2 cut(s) | 207, 210 |
| GluI | GCNGC | 2 cut(s) | 207, 210 |
| HaeIII | GGCC | 1 cut(s) | 73 |
| HapII | CCGG | 1 cut(s) | 189 |
| HgaI | GACGC | 1 cut(s) | 231 |
| Hin1II | CATG | 1 cut(s) | 103 |
| HinfI | GANTC | 1 cut(s) | 122 |
| HpaII | CCGG | 1 cut(s) | 189 |
| HphI | GGTGA | 1 cut(s) | 98 |
| Hpy166II | GTNNAC | 1 cut(s) | 129 |
| Hpy188I | TCNGA | 1 cut(s) | 247 |
| Hpy8I | GTNNAC | 1 cut(s) | 129 |
| HpyAV | CCTTC | 1 cut(s) | 135 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 104 |
| HpyF3I | CTNAG | 1 cut(s) | 183 |
| Hsp92II | CATG | 1 cut(s) | 103 |
| LpnPI | CCDG | 2 cut(s) | 64, 202 |
| Lsp1109I | GCAGC | 2 cut(s) | 193, 196 |
| MaeIII | GTNAC | 1 cut(s) | 86 |
| MboII | GAAGA | 1 cut(s) | 40 |
| MhlI | GDGCHC | 1 cut(s) | 189 |
| MseI | TTAA | 1 cut(s) | 265 |
| MspI | CCGG | 1 cut(s) | 189 |
| MspR9I | CCNGG | 1 cut(s) | 189 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 104 |
| NciI | CCSGG | 1 cut(s) | 189 |
| NlaIII | CATG | 1 cut(s) | 103 |
| NmuCI | GTSAC | 1 cut(s) | 86 |
| PceI | AGGCCT | 1 cut(s) | 73 |
| PfeI | GAWTC | 1 cut(s) | 122 |
| PkrI | GCNGC | 2 cut(s) | 208, 211 |
| PshAI | GACNNNNGTC | 1 cut(s) | 168 |
| SaqAI | TTAA | 1 cut(s) | 265 |
| SatI | GCNGC | 2 cut(s) | 207, 210 |
| ScrFI | CCNGG | 1 cut(s) | 189 |
| SduI | GDGCHC | 1 cut(s) | 189 |
| SetI | ASST | 6 cut(s) | 56, 88, 172, 184, 208, 265 |
| SseBI | AGGCCT | 1 cut(s) | 73 |
| SsiI | CCGC | 1 cut(s) | 105 |
| StuI | AGGCCT | 1 cut(s) | 73 |
| StyD4I | CCNGG | 1 cut(s) | 187 |
| TaqI | TCGA | 1 cut(s) | 65 |
| TfiI | GAWTC | 1 cut(s) | 122 |
| Tru1I | TTAA | 1 cut(s) | 265 |
| Tru9I | TTAA | 1 cut(s) | 265 |
| TseFI | GTSAC | 1 cut(s) | 86 |
| TseI | GCWGC | 2 cut(s) | 206, 209 |
| Tsp45I | GTSAC | 1 cut(s) | 86 |
| TspDTI | ATGAA | 1 cut(s) | 205 |
| XmiI | GTMKAC | 1 cut(s) | 128 |