Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0003376

Physical Location & Seq

Genomic Coordinates Forward (+)

12091989 .. 12093867

Gene Structure 1879 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G121400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1035 bp

ATGGGGTACGAGAAGCAAAGTTTCGACCGTTCAGGGCCATCACACCTAACTTCCATTGATTGGCAGAATCCACAACATCAAAGGTCTGTTGCTGCATGTTTGGTTCAGGGTGTCTATGTTGTTGAGCGGGACCGCCAAGAGGAACGTGAAGGGCCCCAAGCCCTTGCTCCTCCTTGGTGGGAGTTCTTCCATTCTAAGTTGCTCCGCAAGCTTGTGGATGATGATGGTTCCTCAATCTTTGGTGCCATTTATGAATTCAACTCCCCAGTAGAGGGAAAACCTCGTTTTGTAATTGCCTTCCGAGGCACCTTGTTGAAGAAAAGCACAATCTTAAGAGATCTTGATTTGAATGTTCAGGTGCTCCGAAATCAACTTCACCGGACATCTTGCTTTGAGATTGCTATGCAAGCTGTCTGGAATATGGTTGATGCAGCAGGTGATTCAAATGTTTGGTTAGCTGGCCATTCCTTAGGGTCAGCCATGGCAATGCTTGCTGGAAAAACTATGGCTAGCAATGGCATTTCCCTCAAATCTTTTCTCTTCAATCCACCATTTCCGTCTGCCCCGATAGAGAGGATGATTGAGGACAAGAGAGTGAAACACGGGCTTCGGATCGCAGGTAGTGTGAGTACAGCAGTCCTCTATATTGCTACGAAGGCTAAACAACAACCACAAGAGAGAAGTCATTCAGAAGAAAACCCTTTCACTACTCTGTCTGCATGGTTCCCTAGTCTATTTGTCAATCCAGCTGATGACATCTGCTCCGAATATATCGGGTATTTTGAACATAGGAAGAAGATGCAGGACATTGGAGCAGAAGCCATTGAGAGGATAGCAACCCAGCATTCTATTGTGGATCTACTAATGCGTGCAACGGGAAATCAGCCAGCGCCGGAGCCTATATTGCACCTCATTCCTTCTGCAAACCTGACAGTTAATTTGACCCCGTCACGGGGTTTCAAAGAAGCCCATGGAATTCATCAATGGTGGAGAGACGATCTGCAACTCCAGTCTGAGGTTCACGAATACAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_3

Protein Analysis

345

Amino Acids

38.82

Weight (kDa)

6.5

Isoelectric Point (pI)

45.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05260 AT2G05260 AT4G10955 AT4G10955
fragaria_vesca	FvH4_5g04751 FvH4_5g04751 FvH4_5g04760
malus_domestica	MD06G1108800.v1.1 MD14G1129700.v1.1
prunus_persica	Prupe.5G121400_v2.0.a1 Prupe.5G121400_v2.0.a1 Prupe.5G121600_v2.0.a1
pyrus_communis	pycom06g10220
rosa_chinensis	RchiOBHm_Chr7g0194501 RchiOBHm_Chr7g0194511
rosa_laevigata	RLG00000004195 RLG00000004196 RLG00000023363 RLG00000023364
rosa_multiflora	Rmu_co8167496.1_g000001 Rmu_co8479523.1_g000001 Rmu_sc0041088.1_g000001 Rmu_ssc0000261.1_g000021
rosa_roxburghii	Rroxscaffold_3G00261290 Rroxscaffold_3G00261300
rosa_rugosa	Rorug07G0016000
rosa_samantha	Rh7AG143400 Rh7AG143500 Rh7BG143900 Rh7BG144000 Rh7CG147600 Rh7CG147700 Rh7DG145200 Rh7DG145300
rosa_wichuraiana	Rw7G012280 Rw7G012290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	425
Acc36I	ACCTGC	2 cut(s)	425, 608
AccB1I	GGYRCC	2 cut(s)	242, 305
AccB7I	CCANNNNNTGG	1 cut(s)	60
AccBSI	CCGCTC	1 cut(s)	127
AciI	CCGC	3 cut(s)	127, 133, 205
AclWI	GGATC	2 cut(s)	620, 864
AcoI	YGGCCR	1 cut(s)	460
AcsI	RAATTY	2 cut(s)	254, 975
AfaI	GTAC	2 cut(s)	8, 631
AfiI	CCNNNNNNNGG	9 cut(s)	60, 139, 271, 272, 828, 951, 952, 953, 1015
AflII	CTTAAG	1 cut(s)	331
AgsI	TTSAA	7 cut(s)	259, 316, 349, 444, 544, 785, 961
AluBI	AGCT	4 cut(s)	211, 410, 458, 749
AluI	AGCT	4 cut(s)	211, 410, 458, 749
Alw21I	GWGCWC	1 cut(s)	363
Alw26I	GTCTC	1 cut(s)	987
AlwI	GGATC	2 cut(s)	620, 864
AoxI	GGCC	3 cut(s)	35, 152, 460
ApaI	GGGCCC	1 cut(s)	156
ApeKI	GCWGC	2 cut(s)	92, 431
ApoI	RAATTY	2 cut(s)	254, 975
ArsI	GACNNNNNNTTYG	2 cut(s)	922, 954
Asp700I	GAANNNNTTC	1 cut(s)	685
AspLEI	GCGC	1 cut(s)	892
AspS9I	GGNCC	4 cut(s)	35, 130, 152, 153
AsuHPI	GGTGA	2 cut(s)	368, 449
AsuNHI	GCTAGC	1 cut(s)	509
AvaII	GGWCC	1 cut(s)	130
AxyI	CCTNAGG	1 cut(s)	469
BaeGI	GKGCMC	1 cut(s)	156
BalI	TGGCCA	1 cut(s)	462
BanI	GGYRCC	2 cut(s)	242, 305
BanII	GRGCYC	1 cut(s)	156
Bbv12I	GWGCWC	1 cut(s)	363
BbvI	GCAGC	2 cut(s)	79, 443
BccI	CCATC	2 cut(s)	46, 218
BcoDI	GTCTC	1 cut(s)	987
BfaI	CTAG	2 cut(s)	510, 729
BfoI	RGCGCY	1 cut(s)	893
BfrI	CTTAAG	1 cut(s)	331
BfuAI	ACCTGC	2 cut(s)	425, 608
BglII	AGATCT	1 cut(s)	337
BisI	GCNGC	2 cut(s)	93, 432
BlsI	GCNGC	2 cut(s)	94, 433
Bme18I	GGWCC	1 cut(s)	130
BmgT120I	GGNCC	4 cut(s)	35, 130, 152, 153
BmiI	GGNNCC	8 cut(s)	131, 154, 155, 229, 244, 307, 725, 897
BmrI	ACTGGG	1 cut(s)	260
BmsI	GCATC	2 cut(s)	418, 789
BmtI	GCTAGC	1 cut(s)	513
BmuI	ACTGGG	1 cut(s)	260
BpmI	CTGGAG	1 cut(s)	992
BsaJI	CCNNGG	4 cut(s)	173, 301, 480, 970
BsaWI	WCCGGW	1 cut(s)	378
BsaXI	ACNNNNNCTCC	2 cut(s)	746, 776
Bsc4I	CCNNNNNNNGG	9 cut(s)	60, 139, 271, 272, 828, 951, 952, 953, 1015
Bse1I	ACTGG	2 cut(s)	266, 1009
Bse21I	CCTNAGG	1 cut(s)	469
Bse3DI	GCAATG	2 cut(s)	492, 520
BseDI	CCNNGG	4 cut(s)	173, 301, 480, 970
BseGI	GGATG	2 cut(s)	223, 582
BseLI	CCNNNNNNNGG	9 cut(s)	60, 139, 271, 272, 828, 951, 952, 953, 1015
BseMI	GCAATG	2 cut(s)	492, 520
BseMII	CTCAG	1 cut(s)	1005
BseNI	ACTGG	2 cut(s)	266, 1009
BseRI	GAGGAG	1 cut(s)	159
BseSI	GKGCMC	1 cut(s)	156
BseXI	GCAGC	2 cut(s)	79, 443
BseYI	CCCAGC	1 cut(s)	840
Bsh1285I	CGRYCG	1 cut(s)	28
BshFI	GGCC	3 cut(s)	37, 154, 462
BshNI	GGYRCC	2 cut(s)	242, 305
BsiEI	CGRYCG	1 cut(s)	28
BsiHKAI	GWGCWC	1 cut(s)	363
BsiSI	CCGG	2 cut(s)	379, 893
BslFI	GGGAC	1 cut(s)	143
BslI	CCNNNNNNNGG	9 cut(s)	60, 139, 271, 272, 828, 951, 952, 953, 1015
BsmAI	GTCTC	1 cut(s)	987
BsmBI	CGTCTC	1 cut(s)	987
BsmFI	GGGAC	1 cut(s)	143
BsmI	GAATGC	1 cut(s)	844
BsnI	GGCC	3 cut(s)	37, 154, 462
Bsp120I	GGGCCC	1 cut(s)	152
Bsp1286I	GDGCHC	2 cut(s)	156, 363
Bsp143I	GATC	4 cut(s)	337, 612, 856, 997
Bsp19I	CCATGG	2 cut(s)	480, 970
BspACI	CCGC	3 cut(s)	127, 133, 205
BspANI	GGCC	3 cut(s)	37, 154, 462
BspCNI	CTCAG	1 cut(s)	1006
BspLI	GGNNCC	8 cut(s)	131, 154, 155, 229, 244, 307, 725, 897
BspMI	ACCTGC	2 cut(s)	425, 608
BspOI	GCTAGC	1 cut(s)	513
BspPI	GGATC	2 cut(s)	620, 864
BspT107I	GGYRCC	2 cut(s)	242, 305
BspTI	CTTAAG	1 cut(s)	331
BsrBI	CCGCTC	1 cut(s)	127
BsrDI	GCAATG	2 cut(s)	492, 520
BsrI	ACTGG	2 cut(s)	266, 1009
BssECI	CCNNGG	4 cut(s)	173, 301, 480, 970
BssMI	GATC	4 cut(s)	337, 612, 856, 997
BssT1I	CCWWGG	3 cut(s)	173, 480, 970
Bst4CI	ACNGT	2 cut(s)	29, 934
Bst6I	CTCTTC	1 cut(s)	545
BstAFI	CTTAAG	1 cut(s)	331
BstAPI	GCANNNNNTGC	1 cut(s)	491
BstC8I	GCNNGC	7 cut(s)	209, 408, 460, 492, 511, 870, 888
BstDEI	CTNAG	3 cut(s)	195, 469, 1014
BstDSI	CCRYGG	2 cut(s)	480, 970
BstF5I	GGATG	2 cut(s)	223, 582
BstH2I	RGCGCY	1 cut(s)	893
BstHHI	GCGC	1 cut(s)	892
BstKTI	GATC	4 cut(s)	340, 615, 859, 1000
BstMAI	GTCTC	1 cut(s)	987
BstMBI	GATC	4 cut(s)	337, 612, 856, 997
BstMCI	CGRYCG	1 cut(s)	28
BstMWI	GCNNNNNNNGC	5 cut(s)	208, 407, 491, 656, 904
BstNSI	RCATGY	1 cut(s)	99
BstSLI	GKGCMC	1 cut(s)	156
BstV1I	GCAGC	2 cut(s)	79, 443
BstX2I	RGATCY	2 cut(s)	337, 856
BstYI	RGATCY	2 cut(s)	337, 856
Bsu36I	CCTNAGG	1 cut(s)	469
BsuRI	GGCC	3 cut(s)	37, 154, 462
BtgI	CCRYGG	2 cut(s)	480, 970
BtsCI	GGATG	2 cut(s)	223, 582
BveI	ACCTGC	2 cut(s)	425, 608
Cac8I	GCNNGC	7 cut(s)	209, 408, 460, 492, 511, 870, 888
CfoI	GCGC	1 cut(s)	892
Cfr13I	GGNCC	4 cut(s)	35, 130, 152, 153
Csp6I	GTAC	2 cut(s)	7, 630
CviAII	CATG	4 cut(s)	96, 481, 720, 971
CviQI	GTAC	2 cut(s)	7, 630
DdeI	CTNAG	3 cut(s)	195, 469, 1014
DpnI	GATC	4 cut(s)	339, 614, 858, 999
DpnII	GATC	4 cut(s)	337, 612, 856, 997
EaeI	YGGCCR	1 cut(s)	460
Eam1104I	CTCTTC	1 cut(s)	545
EarI	CTCTTC	1 cut(s)	545
Eco130I	CCWWGG	3 cut(s)	173, 480, 970
Eco24I	GRGCYC	1 cut(s)	156
Eco47I	GGWCC	1 cut(s)	130
Eco81I	CCTNAGG	1 cut(s)	469
EcoO109I	RGGNCCY	2 cut(s)	152, 153
EcoRI	GAATTC	2 cut(s)	254, 975
EcoT14I	CCWWGG	3 cut(s)	173, 480, 970
EcoT38I	GRGCYC	1 cut(s)	156
ErhI	CCWWGG	3 cut(s)	173, 480, 970
Esp3I	CGTCTC	1 cut(s)	987
FaeI	CATG	4 cut(s)	99, 484, 723, 974
FaqI	GGGAC	1 cut(s)	143
FatI	CATG	4 cut(s)	95, 480, 719, 970
FauI	CCCGC	1 cut(s)	120
Fnu4HI	GCNGC	2 cut(s)	93, 432
FokI	GGATG	2 cut(s)	230, 589
FriOI	GRGCYC	1 cut(s)	156
Fsp4HI	GCNGC	2 cut(s)	93, 432
FspBI	CTAG	2 cut(s)	510, 729
GlaI	GCGC	1 cut(s)	891
GluI	GCNGC	2 cut(s)	93, 432
GsaI	CCCAGC	1 cut(s)	844
GsuI	CTGGAG	1 cut(s)	992
HaeII	RGCGCY	1 cut(s)	893
HaeIII	GGCC	3 cut(s)	37, 154, 462
HapII	CCGG	2 cut(s)	379, 893
HhaI	GCGC	1 cut(s)	892
Hin1II	CATG	4 cut(s)	99, 484, 723, 974
Hin6I	GCGC	1 cut(s)	890
HinP1I	GCGC	1 cut(s)	890
HindIII	AAGCTT	1 cut(s)	209
HinfI	GANTC	2 cut(s)	67, 440
HpaII	CCGG	2 cut(s)	379, 893
HphI	GGTGA	2 cut(s)	368, 449
Hpy166II	GTNNAC	1 cut(s)	1021
Hpy188I	TCNGA	6 cut(s)	302, 365, 612, 691, 766, 1015
Hpy188III	TCNNGA	3 cut(s)	341, 415, 1022
Hpy8I	GTNNAC	1 cut(s)	1021
HpyAV	CCTTC	4 cut(s)	143, 307, 649, 927
HpyCH4III	ACNGT	2 cut(s)	29, 934
HpyCH4IV	ACGT	1 cut(s)	145
HpyCH4V	TGCA	9 cut(s)	95, 406, 431, 719, 802, 872, 907, 923, 1003
HpyF10VI	GCNNNNNNNGC	5 cut(s)	208, 407, 491, 656, 904
HpyF3I	CTNAG	3 cut(s)	195, 469, 1014
HpySE526I	ACGT	1 cut(s)	145
Hsp92II	CATG	4 cut(s)	99, 484, 723, 974
HspAI	GCGC	1 cut(s)	890
Kzo9I	GATC	4 cut(s)	337, 612, 856, 997
LmnI	GCTCC	6 cut(s)	172, 207, 366, 767, 812, 895
Lsp1109I	GCAGC	2 cut(s)	79, 443
LweI	GCATC	2 cut(s)	418, 789
MaeI	CTAG	2 cut(s)	510, 729
MaeII	ACGT	1 cut(s)	145
MaeIII	GTNAC	1 cut(s)	948
MalI	GATC	4 cut(s)	339, 614, 858, 999
MbiI	CCGCTC	1 cut(s)	127
MboI	GATC	4 cut(s)	337, 612, 856, 997
MboII	GAAGA	6 cut(s)	178, 328, 532, 704, 805, 808
MflI	RGATCY	2 cut(s)	337, 856
MhlI	GDGCHC	2 cut(s)	156, 363
MlsI	TGGCCA	1 cut(s)	462
MluCI	AATT	4 cut(s)	254, 291, 937, 975
MluNI	TGGCCA	1 cut(s)	462
Mox20I	TGGCCA	1 cut(s)	462
MroXI	GAANNNNTTC	1 cut(s)	685
MscI	TGGCCA	1 cut(s)	462
MseI	TTAA	2 cut(s)	332, 936
MslI	CAYNNNNRTG	1 cut(s)	485
Msp20I	TGGCCA	1 cut(s)	462
MspA1I	CMGCKG	1 cut(s)	749
MspCI	CTTAAG	1 cut(s)	331
MspI	CCGG	2 cut(s)	379, 893
Mva1269I	GAATGC	1 cut(s)	844
MwoI	GCNNNNNNNGC	5 cut(s)	208, 407, 491, 656, 904
NcoI	CCATGG	2 cut(s)	480, 970
NdeII	GATC	4 cut(s)	337, 612, 856, 997
NheI	GCTAGC	1 cut(s)	509
NlaIII	CATG	4 cut(s)	99, 484, 723, 974
NlaIV	GGNNCC	8 cut(s)	131, 154, 155, 229, 244, 307, 725, 897
NmuCI	GTSAC	1 cut(s)	948
NspI	RCATGY	1 cut(s)	99
PaqCI	CACCTGC	1 cut(s)	425
PctI	GAATGC	1 cut(s)	844
PdmI	GAANNNNTTC	1 cut(s)	685
PfeI	GAWTC	2 cut(s)	67, 440
PflFI	GACNNNGTC	1 cut(s)	946
PflMI	CCANNNNNTGG	1 cut(s)	60
PkrI	GCNGC	2 cut(s)	94, 433
PspFI	CCCAGC	1 cut(s)	840
PspN4I	GGNNCC	8 cut(s)	131, 154, 155, 229, 244, 307, 725, 897
PspOMI	GGGCCC	1 cut(s)	152
PspPI	GGNCC	4 cut(s)	35, 130, 152, 153
PsuI	RGATCY	2 cut(s)	337, 856
PsyI	GACNNNGTC	1 cut(s)	946
PvuII	CAGCTG	1 cut(s)	749
RsaI	GTAC	2 cut(s)	8, 631
RsaNI	GTAC	2 cut(s)	7, 630
RseI	CAYNNNNRTG	1 cut(s)	485
SaqAI	TTAA	2 cut(s)	332, 936
SatI	GCNGC	2 cut(s)	93, 432
Sau3AI	GATC	4 cut(s)	337, 612, 856, 997
Sau96I	GGNCC	4 cut(s)	35, 130, 152, 153
SduI	GDGCHC	2 cut(s)	156, 363
SfaNI	GCATC	2 cut(s)	418, 789
SinI	GGWCC	1 cut(s)	130
SmiMI	CAYNNNNRTG	1 cut(s)	485
SmlI	CTYRAG	1 cut(s)	331
SmoI	CTYRAG	1 cut(s)	331
Sse9I	AATT	4 cut(s)	254, 291, 937, 975
SsiI	CCGC	3 cut(s)	127, 133, 205
SspMI	CTAG	2 cut(s)	510, 729
StyI	CCWWGG	3 cut(s)	173, 480, 970
TaaI	ACNGT	2 cut(s)	29, 934
TaiI	ACGT	1 cut(s)	148
TaqI	TCGA	1 cut(s)	24
TasI	AATT	4 cut(s)	254, 291, 937, 975
TatI	WGTACW	1 cut(s)	629
TfiI	GAWTC	2 cut(s)	67, 440
Tru1I	TTAA	2 cut(s)	332, 936
Tru9I	TTAA	2 cut(s)	332, 936
TseFI	GTSAC	1 cut(s)	948
TseI	GCWGC	2 cut(s)	92, 431
Tsp45I	GTSAC	1 cut(s)	948
TspDTI	ATGAA	2 cut(s)	267, 968
TspGWI	ACGGA	1 cut(s)	546
Tth111I	GACNNNGTC	1 cut(s)	946
Van91I	CCANNNNNTGG	1 cut(s)	60
Vha464I	CTTAAG	1 cut(s)	331
VpaK11BI	GGWCC	1 cut(s)	130
XapI	RAATTY	2 cut(s)	254, 975
XceI	RCATGY	1 cut(s)	99
XmnI	GAANNNNTTC	1 cut(s)	685
XspI	CTAG	2 cut(s)	510, 729

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.