Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0003376

Physical Location & Seq

Genomic Coordinates Forward (+)

12115314 .. 12116835

Gene Structure 1522 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G121600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1053 bp

ATGGCCTCCGAGAGGGAATGTTTCGACCTTTCAGGGCCATTACACCTAACTTCCATTGATTGGCAGAATACTCAACATCAAAGGTCTGTTGCTGCATGTTTGGTTCAGGGTGTCTATGTTGTTGAGCGGGACCGCCAAGAGGAACGTGAAGGGCCCCAAGCCCTTGCTCCTCCTTGGTGGGAGTTCTTCCATTTTAAGTTGCTCCGCAAGCTTGTGGATGATGTTGGTTTCTCAATCTTTGGTGCCATTTATGAATTCAAACCTCCTCCTTCTCTTTGTAACTCCCCATTAGAGGGAATACCTTGTTTTGTAATTGCCTTCCGAGGCACCTTGACGAAGAATGACTCAGTCTCACGAGATCTTGAGTTGGATGTTGAGGTGGTCCGAAATGGACTTCACCGGACATCTCGCTTTGAGATTGCTATGCAAGCTGTCCGGAATATGGTTGCTGCAGTAGGTGATTCAAATGTTTGGTTAGCTGGCCATTCCTTAGGGTCAGCCATGGCAATGCTTGCTGGAAAAACTATGGCTAGCAATGGCATTTTCCTCAAATCTTTTCTCTTCAATCCACCGTTTGTGTCTGCCCCAATAGAGAGGATTAAGGACAAGAGAGTGAAACACGGGATTCGGATTGCAGGCAGTGTAATTACAGCAGGCCTCACTCTTGCTATGAAGGCTAAACAACAACCACAACAGAGAAGTCATTCAGAAGAAAACCCTTTCACTACTCTGTCTGCATGGTTCCCTGGTCTATTTGTCAATCCAGCTGATGACATCTGCTCCGAATATATCGGGTATTTTGAACATAGGAAGAAGATGCAGGACATTGGAGCAGGAGCCATTGAGAGGTTAGCAACCCAGAATTCTCTTGGGGGTCTACTAATGCATGCAATGGGAAAGCAGCCAGCGCCGGAGCCTCCATTGCACCTCATTCCTTCTGCAAAGCTGACAGTTAATTTGACCCCGTCACGGGATCTTAAAGAAGCCCATGGAATTCACCAATGGTGGAGAGACGATCTGCAACTCCAGTCTGAGGTTCACAAATACAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_3

Protein Analysis

351

Amino Acids

39.15

Weight (kDa)

7.74

Isoelectric Point (pI)

41.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05260 AT2G05260 AT4G10955 AT4G10955
fragaria_vesca	FvH4_5g04751 FvH4_5g04751 FvH4_5g04760
malus_domestica	MD06G1108800.v1.1 MD14G1129700.v1.1
prunus_persica	Prupe.5G121400_v2.0.a1 Prupe.5G121400_v2.0.a1 Prupe.5G121600_v2.0.a1
pyrus_communis	pycom06g10220
rosa_chinensis	RchiOBHm_Chr7g0194501 RchiOBHm_Chr7g0194511
rosa_laevigata	RLG00000004195 RLG00000004196 RLG00000023363 RLG00000023364
rosa_multiflora	Rmu_co8167496.1_g000001 Rmu_co8479523.1_g000001 Rmu_sc0041088.1_g000001 Rmu_ssc0000261.1_g000021
rosa_roxburghii	Rroxscaffold_3G00261290 Rroxscaffold_3G00261300
rosa_rugosa	Rorug07G0016000
rosa_samantha	Rh7AG143400 Rh7AG143500 Rh7BG143900 Rh7BG144000 Rh7CG147600 Rh7CG147700 Rh7DG145200 Rh7DG145300
rosa_wichuraiana	Rw7G012280 Rw7G012290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	242, 326
AccB7I	CCANNNNNTGG	1 cut(s)	60
AccBSI	CCGCTC	1 cut(s)	127
AccI	GTMKAC	1 cut(s)	877
AccIII	TCCGGA	1 cut(s)	435
AciI	CCGC	3 cut(s)	127, 133, 205
AclWI	GGATC	1 cut(s)	981
AcoI	YGGCCR	1 cut(s)	481
AcsI	RAATTY	3 cut(s)	254, 862, 993
AgsI	TTSAA	4 cut(s)	259, 465, 565, 803
AjnI	CCWGG	1 cut(s)	745
AluBI	AGCT	5 cut(s)	211, 431, 479, 767, 946
AluI	AGCT	5 cut(s)	211, 431, 479, 767, 946
Alw26I	GTCTC	2 cut(s)	355, 1005
AlwI	GGATC	1 cut(s)	981
Aor13HI	TCCGGA	1 cut(s)	435
AoxI	GGCC	5 cut(s)	3, 35, 152, 481, 655
ApaI	GGGCCC	1 cut(s)	156
ApeKI	GCWGC	3 cut(s)	92, 449, 901
ApoI	RAATTY	3 cut(s)	254, 862, 993
ArsI	GACNNNNNNTTYG	2 cut(s)	940, 972
Asp700I	GAANNNNTTC	1 cut(s)	703
AspLEI	GCGC	1 cut(s)	910
AspS9I	GGNCC	5 cut(s)	35, 130, 152, 153, 382
AsuHPI	GGTGA	3 cut(s)	389, 470, 989
AsuNHI	GCTAGC	1 cut(s)	530
AvaII	GGWCC	2 cut(s)	130, 382
AxyI	CCTNAGG	1 cut(s)	490
BaeGI	GKGCMC	1 cut(s)	156
BalI	TGGCCA	1 cut(s)	483
BanI	GGYRCC	2 cut(s)	242, 326
BanII	GRGCYC	1 cut(s)	156
BauI	CACGAG	1 cut(s)	354
BbvI	GCAGC	3 cut(s)	79, 436, 913
BciT130I	CCWGG	1 cut(s)	747
BcoDI	GTCTC	2 cut(s)	355, 1005
BfaI	CTAG	1 cut(s)	531
BfmI	CTRYAG	1 cut(s)	450
BfoI	RGCGCY	1 cut(s)	911
BglII	AGATCT	1 cut(s)	358
BisI	GCNGC	3 cut(s)	93, 450, 902
BlsI	GCNGC	3 cut(s)	94, 451, 903
Bme1390I	CCNGG	1 cut(s)	747
Bme18I	GGWCC	2 cut(s)	130, 382
BmgT120I	GGNCC	5 cut(s)	35, 130, 152, 153, 382
BmiI	GGNNCC	8 cut(s)	131, 154, 155, 244, 328, 743, 838, 915
BmrFI	CCNGG	1 cut(s)	747
BmsI	GCATC	1 cut(s)	807
BmtI	GCTAGC	1 cut(s)	534
BpmI	CTGGAG	1 cut(s)	1010
BpuEI	CTTGAG	1 cut(s)	383
BsaJI	CCNNGG	5 cut(s)	173, 322, 501, 745, 988
BsaWI	WCCGGW	2 cut(s)	399, 435
BsaXI	ACNNNNNCTCC	2 cut(s)	764, 794
Bse1I	ACTGG	1 cut(s)	1027
Bse21I	CCTNAGG	1 cut(s)	490
Bse3DI	GCAATG	4 cut(s)	513, 541, 897, 920
BseAI	TCCGGA	1 cut(s)	435
BseBI	CCWGG	1 cut(s)	747
BseDI	CCNNGG	5 cut(s)	173, 322, 501, 745, 988
BseGI	GGATG	2 cut(s)	223, 376
BseMI	GCAATG	4 cut(s)	513, 541, 897, 920
BseMII	CTCAG	2 cut(s)	360, 1023
BseNI	ACTGG	1 cut(s)	1027
BseRI	GAGGAG	2 cut(s)	159, 255
BseSI	GKGCMC	1 cut(s)	156
BseXI	GCAGC	3 cut(s)	79, 436, 913
BshFI	GGCC	5 cut(s)	5, 37, 154, 483, 657
BshNI	GGYRCC	2 cut(s)	242, 326
BsiSI	CCGG	3 cut(s)	400, 436, 911
BslFI	GGGAC	1 cut(s)	143
BsmAI	GTCTC	2 cut(s)	355, 1005
BsmBI	CGTCTC	1 cut(s)	1005
BsmFI	GGGAC	1 cut(s)	143
BsnI	GGCC	5 cut(s)	5, 37, 154, 483, 657
Bsp120I	GGGCCC	1 cut(s)	152
Bsp1286I	GDGCHC	1 cut(s)	156
Bsp13I	TCCGGA	1 cut(s)	435
Bsp143I	GATC	3 cut(s)	358, 973, 1015
Bsp19I	CCATGG	2 cut(s)	501, 988
BspACI	CCGC	3 cut(s)	127, 133, 205
BspANI	GGCC	5 cut(s)	5, 37, 154, 483, 657
BspCNI	CTCAG	2 cut(s)	359, 1024
BspEI	TCCGGA	1 cut(s)	435
BspLI	GGNNCC	8 cut(s)	131, 154, 155, 244, 328, 743, 838, 915
BspMAI	CTGCAG	1 cut(s)	454
BspOI	GCTAGC	1 cut(s)	534
BspPI	GGATC	1 cut(s)	981
BspT107I	GGYRCC	2 cut(s)	242, 326
BsrBI	CCGCTC	1 cut(s)	127
BsrDI	GCAATG	4 cut(s)	513, 541, 897, 920
BsrI	ACTGG	1 cut(s)	1027
BssECI	CCNNGG	5 cut(s)	173, 322, 501, 745, 988
BssMI	GATC	3 cut(s)	358, 973, 1015
BssSI	CACGAG	1 cut(s)	354
BssT1I	CCWWGG	3 cut(s)	173, 501, 988
Bst2BI	CACGAG	1 cut(s)	354
Bst2UI	CCWGG	1 cut(s)	747
Bst4CI	ACNGT	2 cut(s)	573, 952
Bst6I	CTCTTC	1 cut(s)	566
BstAPI	GCANNNNNTGC	1 cut(s)	512
BstC8I	GCNNGC	9 cut(s)	209, 429, 481, 513, 532, 637, 655, 888, 906
BstDEI	CTNAG	3 cut(s)	346, 490, 1032
BstDSI	CCRYGG	2 cut(s)	501, 988
BstENI	CCTNNNNNAGG	1 cut(s)	10
BstF5I	GGATG	2 cut(s)	223, 376
BstH2I	RGCGCY	1 cut(s)	911
BstHHI	GCGC	1 cut(s)	910
BstKTI	GATC	3 cut(s)	361, 976, 1018
BstMAI	GTCTC	2 cut(s)	355, 1005
BstMBI	GATC	3 cut(s)	358, 973, 1015
BstMWI	GCNNNNNNNGC	6 cut(s)	208, 428, 512, 674, 907, 922
BstNI	CCWGG	1 cut(s)	747
BstNSI	RCATGY	2 cut(s)	99, 890
BstSCI	CCNGG	1 cut(s)	745
BstSFI	CTRYAG	1 cut(s)	450
BstSLI	GKGCMC	1 cut(s)	156
BstV1I	GCAGC	3 cut(s)	79, 436, 913
BstX2I	RGATCY	2 cut(s)	358, 973
BstYI	RGATCY	2 cut(s)	358, 973
Bsu36I	CCTNAGG	1 cut(s)	490
BsuRI	GGCC	5 cut(s)	5, 37, 154, 483, 657
BtgI	CCRYGG	2 cut(s)	501, 988
BtsCI	GGATG	2 cut(s)	223, 376
BtsI	GCAGTG	1 cut(s)	646
BtsIMutI	CAGTG	1 cut(s)	646
Cac8I	GCNNGC	9 cut(s)	209, 429, 481, 513, 532, 637, 655, 888, 906
CfoI	GCGC	1 cut(s)	910
Cfr13I	GGNCC	5 cut(s)	35, 130, 152, 153, 382
CviAII	CATG	5 cut(s)	96, 502, 738, 887, 989
DdeI	CTNAG	3 cut(s)	346, 490, 1032
DpnI	GATC	3 cut(s)	360, 975, 1017
DpnII	GATC	3 cut(s)	358, 973, 1015
EaeI	YGGCCR	1 cut(s)	481
Eam1104I	CTCTTC	1 cut(s)	566
EarI	CTCTTC	1 cut(s)	566
Eco130I	CCWWGG	3 cut(s)	173, 501, 988
Eco147I	AGGCCT	1 cut(s)	657
Eco24I	GRGCYC	1 cut(s)	156
Eco47I	GGWCC	2 cut(s)	130, 382
Eco81I	CCTNAGG	1 cut(s)	490
EcoNI	CCTNNNNNAGG	1 cut(s)	10
EcoO109I	RGGNCCY	2 cut(s)	152, 153
EcoRI	GAATTC	3 cut(s)	254, 862, 993
EcoRII	CCWGG	1 cut(s)	745
EcoT14I	CCWWGG	3 cut(s)	173, 501, 988
EcoT22I	ATGCAT	1 cut(s)	888
EcoT38I	GRGCYC	1 cut(s)	156
ErhI	CCWWGG	3 cut(s)	173, 501, 988
Esp3I	CGTCTC	1 cut(s)	1005
FaeI	CATG	5 cut(s)	99, 505, 741, 890, 992
FaqI	GGGAC	1 cut(s)	143
FatI	CATG	5 cut(s)	95, 501, 737, 886, 988
FauI	CCCGC	1 cut(s)	120
FblI	GTMKAC	1 cut(s)	877
Fnu4HI	GCNGC	3 cut(s)	93, 450, 902
FokI	GGATG	2 cut(s)	230, 383
FriOI	GRGCYC	1 cut(s)	156
Fsp4HI	GCNGC	3 cut(s)	93, 450, 902
FspBI	CTAG	1 cut(s)	531
GlaI	GCGC	1 cut(s)	909
GluI	GCNGC	3 cut(s)	93, 450, 902
GsuI	CTGGAG	1 cut(s)	1010
HaeII	RGCGCY	1 cut(s)	911
HaeIII	GGCC	5 cut(s)	5, 37, 154, 483, 657
HapII	CCGG	3 cut(s)	400, 436, 911
HhaI	GCGC	1 cut(s)	910
Hin1II	CATG	5 cut(s)	99, 505, 741, 890, 992
Hin6I	GCGC	1 cut(s)	908
HinP1I	GCGC	1 cut(s)	908
HindIII	AAGCTT	1 cut(s)	209
HinfI	GANTC	3 cut(s)	344, 461, 625
HpaII	CCGG	3 cut(s)	400, 436, 911
HphI	GGTGA	3 cut(s)	389, 470, 989
Hpy166II	GTNNAC	2 cut(s)	878, 1039
Hpy188I	TCNGA	7 cut(s)	10, 323, 386, 630, 709, 784, 1033
Hpy188III	TCNNGA	3 cut(s)	354, 362, 436
Hpy8I	GTNNAC	2 cut(s)	878, 1039
HpyAV	CCTTC	5 cut(s)	143, 279, 328, 667, 945
HpyCH4III	ACNGT	2 cut(s)	573, 952
HpyCH4IV	ACGT	1 cut(s)	145
HpyF10VI	GCNNNNNNNGC	6 cut(s)	208, 428, 512, 674, 907, 922
HpyF3I	CTNAG	3 cut(s)	346, 490, 1032
HpySE526I	ACGT	1 cut(s)	145
Hsp92II	CATG	5 cut(s)	99, 505, 741, 890, 992
HspAI	GCGC	1 cut(s)	908
Kpn2I	TCCGGA	1 cut(s)	435
Kzo9I	GATC	3 cut(s)	358, 973, 1015
LmnI	GCTCC	6 cut(s)	172, 207, 785, 830, 836, 913
Lsp1109I	GCAGC	3 cut(s)	79, 436, 913
LweI	GCATC	1 cut(s)	807
MaeI	CTAG	1 cut(s)	531
MaeII	ACGT	1 cut(s)	145
MaeIII	GTNAC	2 cut(s)	278, 966
MalI	GATC	3 cut(s)	360, 975, 1017
MbiI	CCGCTC	1 cut(s)	127
MboI	GATC	3 cut(s)	358, 973, 1015
MboII	GAAGA	6 cut(s)	178, 349, 553, 722, 823, 826
MflI	RGATCY	2 cut(s)	358, 973
MhlI	GDGCHC	1 cut(s)	156
MlsI	TGGCCA	1 cut(s)	483
MluCI	AATT	6 cut(s)	254, 312, 645, 862, 955, 993
MluNI	TGGCCA	1 cut(s)	483
MlyI	GAGTC	1 cut(s)	338
MmeI	TCCRAC	1 cut(s)	348
Mox20I	TGGCCA	1 cut(s)	483
Mph1103I	ATGCAT	1 cut(s)	888
MroI	TCCGGA	1 cut(s)	435
MroXI	GAANNNNTTC	1 cut(s)	703
MscI	TGGCCA	1 cut(s)	483
MseI	TTAA	4 cut(s)	195, 600, 954, 978
MslI	CAYNNNNRTG	1 cut(s)	506
Msp20I	TGGCCA	1 cut(s)	483
MspA1I	CMGCKG	1 cut(s)	767
MspI	CCGG	3 cut(s)	400, 436, 911
MspR9I	CCNGG	1 cut(s)	747
MvaI	CCWGG	1 cut(s)	747
MwoI	GCNNNNNNNGC	6 cut(s)	208, 428, 512, 674, 907, 922
NcoI	CCATGG	2 cut(s)	501, 988
NdeII	GATC	3 cut(s)	358, 973, 1015
NheI	GCTAGC	1 cut(s)	530
NlaIII	CATG	5 cut(s)	99, 505, 741, 890, 992
NlaIV	GGNNCC	8 cut(s)	131, 154, 155, 244, 328, 743, 838, 915
NmuCI	GTSAC	1 cut(s)	966
NsiI	ATGCAT	1 cut(s)	888
NspI	RCATGY	2 cut(s)	99, 890
PaeI	GCATGC	1 cut(s)	890
PceI	AGGCCT	1 cut(s)	657
PdmI	GAANNNNTTC	1 cut(s)	703
PfeI	GAWTC	2 cut(s)	461, 625
PflFI	GACNNNGTC	2 cut(s)	347, 964
PflMI	CCANNNNNTGG	1 cut(s)	60
PkrI	GCNGC	3 cut(s)	94, 451, 903
PleI	GAGTC	1 cut(s)	338
PpsI	GAGTC	1 cut(s)	338
Psp6I	CCWGG	1 cut(s)	745
PspGI	CCWGG	1 cut(s)	745
PspN4I	GGNNCC	8 cut(s)	131, 154, 155, 244, 328, 743, 838, 915
PspOMI	GGGCCC	1 cut(s)	152
PspPI	GGNCC	5 cut(s)	35, 130, 152, 153, 382
PstI	CTGCAG	1 cut(s)	454
PsuI	RGATCY	2 cut(s)	358, 973
PsyI	GACNNNGTC	2 cut(s)	347, 964
PvuII	CAGCTG	1 cut(s)	767
RseI	CAYNNNNRTG	1 cut(s)	506
SaqAI	TTAA	4 cut(s)	195, 600, 954, 978
SatI	GCNGC	3 cut(s)	93, 450, 902
Sau3AI	GATC	3 cut(s)	358, 973, 1015
Sau96I	GGNCC	5 cut(s)	35, 130, 152, 153, 382
SchI	GAGTC	1 cut(s)	338
ScrFI	CCNGG	1 cut(s)	747
SduI	GDGCHC	1 cut(s)	156
SfaNI	GCATC	1 cut(s)	807
SfcI	CTRYAG	1 cut(s)	450
SinI	GGWCC	2 cut(s)	130, 382
SmiMI	CAYNNNNRTG	1 cut(s)	506
SmlI	CTYRAG	1 cut(s)	362
SmoI	CTYRAG	1 cut(s)	362
SphI	GCATGC	1 cut(s)	890
Sse9I	AATT	6 cut(s)	254, 312, 645, 862, 955, 993
SseBI	AGGCCT	1 cut(s)	657
SsiI	CCGC	3 cut(s)	127, 133, 205
SspMI	CTAG	1 cut(s)	531
StuI	AGGCCT	1 cut(s)	657
StyD4I	CCNGG	1 cut(s)	745
StyI	CCWWGG	3 cut(s)	173, 501, 988
TaaI	ACNGT	2 cut(s)	573, 952
TaiI	ACGT	1 cut(s)	148
TaqI	TCGA	1 cut(s)	24
TasI	AATT	6 cut(s)	254, 312, 645, 862, 955, 993
TfiI	GAWTC	2 cut(s)	461, 625
Tru1I	TTAA	4 cut(s)	195, 600, 954, 978
Tru9I	TTAA	4 cut(s)	195, 600, 954, 978
TscAI	CASTG	1 cut(s)	646
TseFI	GTSAC	1 cut(s)	966
TseI	GCWGC	3 cut(s)	92, 449, 901
Tsp45I	GTSAC	1 cut(s)	966
TspDTI	ATGAA	2 cut(s)	267, 686
TspRI	CASTG	1 cut(s)	646
Tth111I	GACNNNGTC	2 cut(s)	347, 964
Van91I	CCANNNNNTGG	1 cut(s)	60
VpaK11BI	GGWCC	2 cut(s)	130, 382
XagI	CCTNNNNNAGG	1 cut(s)	10
XapI	RAATTY	3 cut(s)	254, 862, 993
XceI	RCATGY	2 cut(s)	99, 890
XcmI	CCANNNNNNNNNTGG	1 cut(s)	866
XmiI	GTMKAC	1 cut(s)	877
XmnI	GAANNNNTTC	1 cut(s)	703
XspI	CTAG	1 cut(s)	531
Zsp2I	ATGCAT	1 cut(s)	888

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.