Rorug07G0016000

GDSL esterase lipase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
1253142 .. 1255504
2363 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0016000.1

Sequence Viewer

Length: 1740 bp
ATGTTGAACTTTTGTTTCTTGCGTTGTGTGATCATCCAAAGAAATCAGGGAACTGAAAGCTTGAAATTTGGTTGTTTTAATTTGTTGCTTTTTCAGGTTGAGTGGAAAAATGTGACCCGTTTGTGCCACACGAAGCCACTTCTAACTGTGAATGGAGAGTATCCAGGTCCAACGATTGCAGTTCATGAAGGTGATAATGTAGAAATTAAGGTGACGAATCGCATTGCGCAGAACACTACCCTCCATTGGCATGGTATAAGGCAACTAAGAACAGGATGGGCAGACGGTCCAGCTTACATTACGCAATGTCCGATTGGAGGAGGGAAGACCTACACATACAAGTTCACTGTAATCAACCAGAGAGGCACCCTTTGGTGGCATGCTCATCATTCGTGGCAACGAGCTTCTGTTTATGGCGCTTTTATCATCCACCCTCGCATGCCATATCCATTTTCAGTTCCAATTCAAGATGAATTCCTCATCATCTTTGGTGAATGGTGGAATGGAGATATAGATTCAATCGAAAGTGAAATGATGAAGTATGGAGGCGGCCCTGATATTTCAAATGCATATACCATAAACGGTTTGCCAGGACCATTCTATAATTGCTCGAACAAAGATACATTGATCAACACTGTGGAACATGGCAAAACATACATGCTAAGAATCATCAATGCAGCACTGAATGATGAGCTATTCTTTGCTGTTGCTAATCACACACTGACGGTTGTGGAGATTGATGCAGCGTACACAAAACCATTCAAAACCAAAGCCATTATGATAGCTCCTGGCCAAACCACCAATGTTCTGCTCACTGCTAATCAAGTGCCTGATTCCTCCGGCATGTTCTTAATGGCTGCCTGGACTTACCTCACATCTGTTTTCCCTTTCAATAATTCCACCACAGCCGGTTTCTTGCAGTACAAGAACCCGATGAGTACTGATCACATGAGTAAGCACCCGAAAAAGGTTACTACTTTTGATCCTGTCATGTACAACTTTCCTCAGATGGATGATACCAAATATTACACTAAATTTGATGACAATCTGAGAAGCCTTTCCTCCCCTCGGTATCCATGTAATGTACCAAAAACTATCCACAAACGGATAGTGACAGTTATAAGCCTTAACCTCCAAGATTGTCCTGCTAACAAAACCTGCAAGGGCTATGCCAACAAGAGGTTCTATGCTTCAATGAACAACCAGTCCTTTGTTCGTCCCGCCGTGTCAATATTGGAATCTCATTACAAGAAGCTCAAAAAAAGTCAATACTCCACCGATTTCCCAGAGAAGCCTCGAAGGTCATTTGACTATACCGGGGTGAATCCAGTCGCTGAAAACATGAACACAGAATTTGGTACAAAGATCATACAAGTCCCTTATGGAACAAACTTGGAATTTGTGCTGCAAGGCACAAGCTTCCTTAATGTGGAGAACCACCCTATTCATTTTCATGGACACAACTTCTTCATAGTTGGAAAGGGGTTTGGGAACTTCAATGTCTCCACGGATCCAGCAAAGTACAACCTTGTTGATCCTCCTGAGAGAAACACTGTGGCAGTTCCAAGTGGAGGATGGGCAGCGATTCGGTTCAAGGCCGATAATCCAGGAGTGTGGTTCATACATTGTCATCTTGAAGAACACACTTCTTGGGGTCTTGCCTCAGGCTTCATAGTTCAAAATGGTCATGGACCATCTCAATCCTTGCTTCCTCCTCCTAAAGATCTTCCCTCATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

579

Amino Acids

65.43

Weight (kDa)

8.75

Isoelectric Point (pI)

35.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 33 - 146 9.8e-44 Multicopper oxidase
Cu-oxidase PF00394 158 - 310 1.7e-39 Multicopper oxidase
Cu-oxidase_2 PF07731 428 - 562 4.5e-42 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1121
Acc16I TGCGCA 1 cut(s) 228
Acc36I ACCTGC 1 cut(s) 1166
AccB1I GGYRCC 1 cut(s) 365
AciI CCGC 2 cut(s) 549, 1221
AclWI GGATC 4 cut(s) 977, 1505, 1518, 1529
AcoI YGGCCR 1 cut(s) 790
AcsI RAATTY 5 cut(s) 65, 473, 1034, 1352, 1397
AfaI GTAC 7 cut(s) 749, 923, 940, 995, 1086, 1360, 1523
AfiI CCNNNNNNNGG 8 cut(s) 246, 317, 375, 967, 1068, 1179, 1429, 1571
AjnI CCWGG 5 cut(s) 163, 589, 787, 860, 1606
AjuI GAANNNNNNNTTGG 2 cut(s) 1166, 1198
AloI GAACNNNNNNTCC 2 cut(s) 1190, 1222
AluBI AGCT 7 cut(s) 60, 293, 404, 694, 785, 1255, 1419
AluI AGCT 7 cut(s) 60, 293, 404, 694, 785, 1255, 1419
Alw26I GTCTC 1 cut(s) 1507
AlwI GGATC 4 cut(s) 977, 1505, 1518, 1529
AlwNI CAGNNNCTG 1 cut(s) 1334
AoxI GGCC 3 cut(s) 550, 790, 1596
ApeKI GCWGC 5 cut(s) 677, 743, 857, 1405, 1580
ApoI RAATTY 5 cut(s) 65, 473, 1034, 1352, 1397
Asp700I GAANNNNTTC 1 cut(s) 1057
AspLEI GCGC 2 cut(s) 229, 419
AspS9I GGNCC 5 cut(s) 167, 287, 551, 593, 1691
AsuC2I CCSGG 1 cut(s) 1318
AsuHPI GGTGA 4 cut(s) 203, 223, 503, 1333
AvaII GGWCC 4 cut(s) 167, 287, 593, 1691
AxyI CCTNAGG 1 cut(s) 1663
BalI TGGCCA 1 cut(s) 792
BamHI GGATCC 1 cut(s) 1510
BanI GGYRCC 1 cut(s) 365
BbsI GAAGAC 1 cut(s) 332
BbvI GCAGC 5 cut(s) 689, 755, 844, 1392, 1592
BccI CCATC 4 cut(s) 270, 1003, 1569, 1702
BceAI ACGGC 1 cut(s) 1208
BciT130I CCWGG 5 cut(s) 165, 591, 789, 862, 1608
BciVI GTATCC 2 cut(s) 171, 1083
BclI TGATCA 3 cut(s) 30, 627, 943
BcnI CCSGG 1 cut(s) 1318
BcoDI GTCTC 1 cut(s) 1507
BfoI RGCGCY 1 cut(s) 420
BfuAI ACCTGC 1 cut(s) 1166
BfuI GTATCC 2 cut(s) 171, 1083
BglII AGATCT 1 cut(s) 1723
BisI GCNGC 6 cut(s) 550, 678, 744, 858, 1406, 1581
BlsI GCNGC 6 cut(s) 551, 679, 745, 859, 1407, 1582
BmcAI AGTACT 1 cut(s) 940
Bme1390I CCNGG 6 cut(s) 165, 591, 789, 862, 1318, 1608
Bme18I GGWCC 4 cut(s) 167, 287, 593, 1691
BmgT120I GGNCC 5 cut(s) 167, 287, 551, 593, 1691
BmiI GGNNCC 2 cut(s) 367, 1512
BmrFI CCNGG 6 cut(s) 165, 591, 789, 862, 1318, 1608
BmsI GCATC 1 cut(s) 730
BpiI GAAGAC 1 cut(s) 332
BpuMI CCSGG 1 cut(s) 1318
BsaBI GATNNNNATC 1 cut(s) 1044
BsaJI CCNNGG 3 cut(s) 1067, 1317, 1506
Bsc4I CCNNNNNNNGG 8 cut(s) 246, 317, 375, 967, 1068, 1179, 1429, 1571
Bse118I RCCGGY 1 cut(s) 908
Bse1I ACTGG 2 cut(s) 1204, 1328
Bse21I CCTNAGG 1 cut(s) 1663
Bse3DI GCAATG 2 cut(s) 222, 311
Bse8I GATNNNNATC 1 cut(s) 1044
BseBI CCWGG 5 cut(s) 165, 591, 789, 862, 1608
BseDI CCNNGG 3 cut(s) 1067, 1317, 1506
BseGI GGATG 5 cut(s) 33, 281, 426, 1018, 1580
BseJI GATNNNNATC 1 cut(s) 1044
BseLI CCNNNNNNNGG 8 cut(s) 246, 317, 375, 967, 1068, 1179, 1429, 1571
BseMI GCAATG 2 cut(s) 222, 311
BseMII CTCAG 4 cut(s) 1019, 1040, 1533, 1677
BseNI ACTGG 2 cut(s) 1204, 1328
BseRI GAGGAG 2 cut(s) 333, 1704
BseXI GCAGC 5 cut(s) 689, 755, 844, 1392, 1592
BshFI GGCC 3 cut(s) 552, 792, 1598
BshNI GGYRCC 1 cut(s) 365
BsiSI CCGG 3 cut(s) 840, 909, 1317
BslFI GGGAC 2 cut(s) 1203, 1361
BslI CCNNNNNNNGG 8 cut(s) 246, 317, 375, 967, 1068, 1179, 1429, 1571
BsmAI GTCTC 1 cut(s) 1507
BsmFI GGGAC 2 cut(s) 1203, 1361
BsnI GGCC 3 cut(s) 552, 792, 1598
Bsp1407I TGTACA 1 cut(s) 993
Bsp143I GATC 8 cut(s) 30, 627, 943, 982, 1365, 1510, 1534, 1723
BspACI CCGC 2 cut(s) 549, 1221
BspANI GGCC 3 cut(s) 552, 792, 1598
BspCNI CTCAG 4 cut(s) 1018, 1041, 1534, 1676
BspHI TCATGA 1 cut(s) 184
BspLI GGNNCC 2 cut(s) 367, 1512
BspMI ACCTGC 1 cut(s) 1166
BspPI GGATC 4 cut(s) 977, 1505, 1518, 1529
BspT107I GGYRCC 1 cut(s) 365
BsrDI GCAATG 2 cut(s) 222, 311
BsrFI RCCGGY 1 cut(s) 908
BsrGI TGTACA 1 cut(s) 993
BsrI ACTGG 2 cut(s) 1204, 1328
BssAI RCCGGY 1 cut(s) 908
BssECI CCNNGG 3 cut(s) 1067, 1317, 1506
BssMI GATC 8 cut(s) 30, 627, 943, 982, 1365, 1510, 1534, 1723
Bst2UI CCWGG 5 cut(s) 165, 591, 789, 862, 1608
Bst4CI ACNGT 8 cut(s) 148, 287, 349, 584, 637, 727, 1117, 1555
BstAUI TGTACA 1 cut(s) 993
BstC8I GCNNGC 2 cut(s) 381, 440
BstDEI CTNAG 6 cut(s) 266, 662, 1005, 1049, 1542, 1663
BstDSI CCRYGG 1 cut(s) 1506
BstF5I GGATG 5 cut(s) 33, 281, 426, 1018, 1580
BstH2I RGCGCY 1 cut(s) 420
BstHHI GCGC 2 cut(s) 229, 419
BstKTI GATC 8 cut(s) 33, 630, 946, 985, 1368, 1513, 1537, 1726
BstMAI GTCTC 1 cut(s) 1507
BstMBI GATC 8 cut(s) 30, 627, 943, 982, 1365, 1510, 1534, 1723
BstNI CCWGG 5 cut(s) 165, 591, 789, 862, 1608
BstNSI RCATGY 4 cut(s) 383, 442, 661, 847
BstSCI CCNGG 6 cut(s) 163, 589, 787, 860, 1316, 1606
BstV1I GCAGC 5 cut(s) 689, 755, 844, 1392, 1592
BstV2I GAAGAC 1 cut(s) 332
BstX2I RGATCY 2 cut(s) 1510, 1723
BstXI CCANNNNNNTGG 2 cut(s) 251, 1614
BstYI RGATCY 2 cut(s) 1510, 1723
Bsu36I CCTNAGG 1 cut(s) 1663
BsuI GTATCC 2 cut(s) 171, 1083
BsuRI GGCC 3 cut(s) 552, 792, 1598
BtgI CCRYGG 1 cut(s) 1506
BtsCI GGATG 5 cut(s) 33, 281, 426, 1018, 1580
BtsI GCAGTG 1 cut(s) 813
BtsIMutI CAGTG 6 cut(s) 345, 633, 680, 719, 813, 1551
BveI ACCTGC 1 cut(s) 1166
Cac8I GCNNGC 2 cut(s) 381, 440
CaiI CAGNNNCTG 1 cut(s) 1334
CciI TCATGA 1 cut(s) 184
CfoI GCGC 2 cut(s) 229, 419
Cfr10I RCCGGY 1 cut(s) 908
Cfr13I GGNCC 5 cut(s) 167, 287, 551, 593, 1691
Csp6I GTAC 7 cut(s) 748, 922, 939, 994, 1085, 1359, 1522
CviQI GTAC 7 cut(s) 748, 922, 939, 994, 1085, 1359, 1522
DdeI CTNAG 6 cut(s) 266, 662, 1005, 1049, 1542, 1663
DpnI GATC 8 cut(s) 32, 629, 945, 984, 1367, 1512, 1536, 1725
DpnII GATC 8 cut(s) 30, 627, 943, 982, 1365, 1510, 1534, 1723
EaeI YGGCCR 1 cut(s) 790
Eco47I GGWCC 4 cut(s) 167, 287, 593, 1691
Eco81I CCTNAGG 1 cut(s) 1663
EcoRI GAATTC 1 cut(s) 473
EcoRII CCWGG 5 cut(s) 163, 589, 787, 860, 1606
EcoT22I ATGCAT 1 cut(s) 571
FaqI GGGAC 2 cut(s) 1203, 1361
FauI CCCGC 1 cut(s) 1228
FbaI TGATCA 3 cut(s) 30, 627, 943
Fnu4HI GCNGC 6 cut(s) 550, 678, 744, 858, 1406, 1581
FokI GGATG 5 cut(s) 20, 288, 413, 1025, 1587
Fsp4HI GCNGC 6 cut(s) 550, 678, 744, 858, 1406, 1581
FspI TGCGCA 1 cut(s) 228
GlaI GCGC 2 cut(s) 228, 418
GluI GCNGC 6 cut(s) 550, 678, 744, 858, 1406, 1581
HaeII RGCGCY 1 cut(s) 420
HaeIII GGCC 3 cut(s) 552, 792, 1598
HapII CCGG 3 cut(s) 840, 909, 1317
HhaI GCGC 2 cut(s) 229, 419
Hin6I GCGC 2 cut(s) 227, 417
HinP1I GCGC 2 cut(s) 227, 417
HindIII AAGCTT 2 cut(s) 58, 1417
HinfI GANTC 7 cut(s) 217, 515, 666, 833, 1238, 1324, 1585
HpaII CCGG 3 cut(s) 840, 909, 1317
HphI GGTGA 4 cut(s) 203, 223, 503, 1333
Hpy166II GTNNAC 2 cut(s) 345, 750
Hpy188I TCNGA 3 cut(s) 312, 1008, 1050
Hpy188III TCNNGA 4 cut(s) 185, 467, 1541, 1634
Hpy8I GTNNAC 2 cut(s) 345, 750
HpyAV CCTTC 2 cut(s) 182, 1293
HpyCH4III ACNGT 8 cut(s) 148, 287, 349, 584, 637, 727, 1117, 1555
HpyCH4V TGCA 7 cut(s) 179, 569, 677, 743, 919, 1161, 1408
HpyF3I CTNAG 6 cut(s) 266, 662, 1005, 1049, 1542, 1663
HspAI GCGC 2 cut(s) 227, 417
Ksp22I TGATCA 3 cut(s) 30, 627, 943
Kzo9I GATC 8 cut(s) 30, 627, 943, 982, 1365, 1510, 1534, 1723
LmnI GCTCC 1 cut(s) 790
Lsp1109I GCAGC 5 cut(s) 689, 755, 844, 1392, 1592
LweI GCATC 1 cut(s) 730
MaeIII GTNAC 4 cut(s) 112, 211, 970, 1111
MalI GATC 8 cut(s) 32, 629, 945, 984, 1367, 1512, 1536, 1725
MboI GATC 8 cut(s) 30, 627, 943, 982, 1365, 1510, 1534, 1723
MboII GAAGA 4 cut(s) 337, 1459, 1649, 1718
MflI RGATCY 2 cut(s) 1510, 1723
MlsI TGGCCA 1 cut(s) 792
MluNI TGGCCA 1 cut(s) 792
MmeI TCCRAC 2 cut(s) 194, 1456
Mox20I TGGCCA 1 cut(s) 792
Mph1103I ATGCAT 1 cut(s) 571
MroXI GAANNNNTTC 1 cut(s) 1057
MscI TGGCCA 1 cut(s) 792
MseI TTAA 5 cut(s) 78, 207, 851, 1128, 1425
MslI CAYNNNNRTG 3 cut(s) 189, 249, 1452
Msp20I TGGCCA 1 cut(s) 792
MspI CCGG 3 cut(s) 840, 909, 1317
MspR9I CCNGG 6 cut(s) 165, 591, 789, 862, 1318, 1608
MvaI CCWGG 5 cut(s) 165, 591, 789, 862, 1608
NciI CCSGG 1 cut(s) 1318
NdeII GATC 8 cut(s) 30, 627, 943, 982, 1365, 1510, 1534, 1723
NlaIV GGNNCC 2 cut(s) 367, 1512
NmuCI GTSAC 3 cut(s) 112, 211, 1111
NsbI TGCGCA 1 cut(s) 228
NsiI ATGCAT 1 cut(s) 571
NspI RCATGY 4 cut(s) 383, 442, 661, 847
PaeI GCATGC 2 cut(s) 383, 442
PagI TCATGA 1 cut(s) 184
PcsI WCGNNNNNNNCGW 1 cut(s) 308
PdmI GAANNNNTTC 1 cut(s) 1057
PfeI GAWTC 7 cut(s) 217, 515, 666, 833, 1238, 1324, 1585
PfoI TCCNGGA 1 cut(s) 1606
PkrI GCNGC 6 cut(s) 551, 679, 745, 859, 1407, 1582
PsiI TTATAA 1 cut(s) 1121
Psp6I CCWGG 5 cut(s) 163, 589, 787, 860, 1606
PspGI CCWGG 5 cut(s) 163, 589, 787, 860, 1606
PspN4I GGNNCC 2 cut(s) 367, 1512
PspPI GGNCC 5 cut(s) 167, 287, 551, 593, 1691
PstNI CAGNNNCTG 1 cut(s) 1334
PsuI RGATCY 2 cut(s) 1510, 1723
RsaI GTAC 7 cut(s) 749, 923, 940, 995, 1086, 1360, 1523
RsaNI GTAC 7 cut(s) 748, 922, 939, 994, 1085, 1359, 1522
RseI CAYNNNNRTG 3 cut(s) 189, 249, 1452
SaqAI TTAA 5 cut(s) 78, 207, 851, 1128, 1425
SatI GCNGC 6 cut(s) 550, 678, 744, 858, 1406, 1581
Sau3AI GATC 8 cut(s) 30, 627, 943, 982, 1365, 1510, 1534, 1723
Sau96I GGNCC 5 cut(s) 167, 287, 551, 593, 1691
ScaI AGTACT 1 cut(s) 940
ScrFI CCNGG 6 cut(s) 165, 591, 789, 862, 1318, 1608
SfaNI GCATC 1 cut(s) 730
SinI GGWCC 4 cut(s) 167, 287, 593, 1691
SmiMI CAYNNNNRTG 3 cut(s) 189, 249, 1452
SphI GCATGC 2 cut(s) 383, 442
SsiI CCGC 2 cut(s) 549, 1221
SspI AATATT 2 cut(s) 1025, 1233
StyD4I CCNGG 6 cut(s) 163, 589, 787, 860, 1316, 1606
TaaI ACNGT 8 cut(s) 148, 287, 349, 584, 637, 727, 1117, 1555
TaqI TCGA 3 cut(s) 522, 611, 1297
TatI WGTACW 4 cut(s) 921, 938, 993, 1521
TauI GCSGC 1 cut(s) 552
TfiI GAWTC 7 cut(s) 217, 515, 666, 833, 1238, 1324, 1585
Tru1I TTAA 5 cut(s) 78, 207, 851, 1128, 1425
Tru9I TTAA 5 cut(s) 78, 207, 851, 1128, 1425
TscAI CASTG 6 cut(s) 352, 640, 687, 726, 820, 1558
TseFI GTSAC 3 cut(s) 112, 211, 1111
TseI GCWGC 5 cut(s) 677, 743, 857, 1405, 1580
Tsp45I GTSAC 3 cut(s) 112, 211, 1111
TspGWI ACGGA 2 cut(s) 1120, 1523
TspRI CASTG 6 cut(s) 352, 640, 687, 726, 820, 1558
VpaK11BI GGWCC 4 cut(s) 167, 287, 593, 1691
XapI RAATTY 5 cut(s) 65, 473, 1034, 1352, 1397
XceI RCATGY 4 cut(s) 383, 442, 661, 847
XcmI CCANNNNNNNNNTGG 1 cut(s) 1572
XmnI GAANNNNTTC 1 cut(s) 1057
ZrmI AGTACT 1 cut(s) 940
Zsp2I ATGCAT 1 cut(s) 571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.