Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G28160 AT2G28160 |
| fragaria_vesca | FvH4_3g30650 FvH4_3g30660 FvH4_3g30660 |
| malus_domestica | MD03G1127500.v1.1 MD03G1127600.v1.1 MD03G1129100.v1.1 |
| prunus_persica | Prupe.6G112500_v2.0.a1 Prupe.6G112600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0056871 RchiOBHm_Chr5g0056881 |
| rosa_laevigata | RLG00000035133 RLG00000035134 |
| rosa_multiflora | Rmu_sc0001460.1_g000011 Rmu_sc0001460.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00023420 Rroxscaffold_1G00023430 |
| rosa_rugosa | Rorug05G0302900 Rorug05G0303000 Rorug05G0303200 Rorug05G0303300 |
| rosa_samantha | Rh5AG373100 Rh5AG373300 Rh5BG384200 Rh5BG384300 Rh5CG407300 Rh5CG407500 Rh5DG397300 Rh5DG397600 |
| rosa_wichuraiana | Rw5G034980 Rw5G035090 Rw5G035100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 174 |
| AccII | CGCG | 1 cut(s) | 105 |
| AciI | CCGC | 3 cut(s) | 103, 105, 472 |
| AclWI | GGATC | 1 cut(s) | 113 |
| AcoI | YGGCCR | 1 cut(s) | 106 |
| AcsI | RAATTY | 1 cut(s) | 307 |
| AcuI | CTGAAG | 1 cut(s) | 186 |
| AfaI | GTAC | 1 cut(s) | 196 |
| AgsI | TTSAA | 2 cut(s) | 223, 481 |
| AluBI | AGCT | 1 cut(s) | 206 |
| AluI | AGCT | 1 cut(s) | 206 |
| Alw21I | GWGCWC | 1 cut(s) | 286 |
| Alw26I | GTCTC | 1 cut(s) | 421 |
| AlwI | GGATC | 1 cut(s) | 113 |
| AoxI | GGCC | 1 cut(s) | 106 |
| ApeKI | GCWGC | 1 cut(s) | 159 |
| ApoI | RAATTY | 1 cut(s) | 307 |
| AspS9I | GGNCC | 1 cut(s) | 474 |
| AvaII | GGWCC | 1 cut(s) | 474 |
| Bbv12I | GWGCWC | 1 cut(s) | 286 |
| BbvI | GCAGC | 1 cut(s) | 146 |
| BccI | CCATC | 2 cut(s) | 27, 308 |
| BceAI | ACGGC | 1 cut(s) | 215 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 230, 263, 264, 297 |
| BclI | TGATCA | 1 cut(s) | 150 |
| BcoDI | GTCTC | 1 cut(s) | 421 |
| BisI | GCNGC | 2 cut(s) | 106, 160 |
| BlsI | GCNGC | 2 cut(s) | 107, 161 |
| BmcAI | AGTACT | 1 cut(s) | 196 |
| Bme18I | GGWCC | 1 cut(s) | 474 |
| BmgT120I | GGNCC | 1 cut(s) | 474 |
| BmsI | GCATC | 3 cut(s) | 61, 217, 245 |
| BsaI | GGTCTC | 1 cut(s) | 421 |
| BsaJI | CCNNGG | 3 cut(s) | 10, 103, 411 |
| Bse1I | ACTGG | 1 cut(s) | 122 |
| BseDI | CCNNGG | 3 cut(s) | 10, 103, 411 |
| BseGI | GGATG | 4 cut(s) | 10, 236, 453, 498 |
| BseNI | ACTGG | 1 cut(s) | 122 |
| BseRI | GAGGAG | 7 cut(s) | 439, 442, 445, 448, 451, 454, 457 |
| BseXI | GCAGC | 1 cut(s) | 146 |
| Bsh1236I | CGCG | 1 cut(s) | 105 |
| Bsh1285I | CGRYCG | 1 cut(s) | 404 |
| BshFI | GGCC | 1 cut(s) | 108 |
| BsiEI | CGRYCG | 1 cut(s) | 404 |
| BsiHKAI | GWGCWC | 1 cut(s) | 286 |
| BsmAI | GTCTC | 1 cut(s) | 421 |
| BsnI | GGCC | 1 cut(s) | 108 |
| Bso31I | GGTCTC | 1 cut(s) | 421 |
| Bsp1286I | GDGCHC | 1 cut(s) | 286 |
| Bsp143I | GATC | 5 cut(s) | 94, 118, 150, 340, 397 |
| Bsp19I | CCATGG | 1 cut(s) | 10 |
| BspACI | CCGC | 3 cut(s) | 103, 105, 472 |
| BspANI | GGCC | 1 cut(s) | 108 |
| BspFNI | CGCG | 1 cut(s) | 105 |
| BspPI | GGATC | 1 cut(s) | 113 |
| BspTNI | GGTCTC | 1 cut(s) | 421 |
| BsrI | ACTGG | 1 cut(s) | 122 |
| BssECI | CCNNGG | 3 cut(s) | 10, 103, 411 |
| BssMI | GATC | 5 cut(s) | 94, 118, 150, 340, 397 |
| BssT1I | CCWWGG | 2 cut(s) | 10, 411 |
| BstDSI | CCRYGG | 2 cut(s) | 10, 103 |
| BstF5I | GGATG | 4 cut(s) | 10, 236, 453, 498 |
| BstFNI | CGCG | 1 cut(s) | 105 |
| BstKTI | GATC | 5 cut(s) | 97, 121, 153, 343, 400 |
| BstMAI | GTCTC | 1 cut(s) | 421 |
| BstMBI | GATC | 5 cut(s) | 94, 118, 150, 340, 397 |
| BstMCI | CGRYCG | 1 cut(s) | 404 |
| BstUI | CGCG | 1 cut(s) | 105 |
| BstV1I | GCAGC | 1 cut(s) | 146 |
| BstX2I | RGATCY | 1 cut(s) | 118 |
| BstYI | RGATCY | 1 cut(s) | 118 |
| BsuRI | GGCC | 1 cut(s) | 108 |
| BtgI | CCRYGG | 2 cut(s) | 10, 103 |
| BtsCI | GGATG | 4 cut(s) | 10, 236, 453, 498 |
| BtsI | GCAGTG | 1 cut(s) | 467 |
| BtsIMutI | CAGTG | 2 cut(s) | 129, 467 |
| Cfr13I | GGNCC | 1 cut(s) | 474 |
| Cfr42I | CCGCGG | 1 cut(s) | 106 |
| Csp6I | GTAC | 1 cut(s) | 195 |
| CviAII | CATG | 1 cut(s) | 11 |
| CviJI | RGCY | 4 cut(s) | 108, 159, 206, 460 |
| CviKI_1 | RGCY | 4 cut(s) | 108, 159, 206, 460 |
| CviQI | GTAC | 1 cut(s) | 195 |
| DpnI | GATC | 5 cut(s) | 96, 120, 152, 342, 399 |
| DpnII | GATC | 5 cut(s) | 94, 118, 150, 340, 397 |
| EaeI | YGGCCR | 1 cut(s) | 106 |
| Eco130I | CCWWGG | 2 cut(s) | 10, 411 |
| Eco31I | GGTCTC | 1 cut(s) | 421 |
| Eco47I | GGWCC | 1 cut(s) | 474 |
| Eco57I | CTGAAG | 1 cut(s) | 186 |
| EcoT14I | CCWWGG | 2 cut(s) | 10, 411 |
| ErhI | CCWWGG | 2 cut(s) | 10, 411 |
| FaeI | CATG | 1 cut(s) | 14 |
| FaiI | YATR | 7 cut(s) | 12, 33, 65, 149, 174, 345, 465 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 184, 216, 238, 270, 271, 303 |
| FatI | CATG | 1 cut(s) | 10 |
| FbaI | TGATCA | 1 cut(s) | 150 |
| Fnu4HI | GCNGC | 2 cut(s) | 106, 160 |
| FokI | GGATG | 3 cut(s) | 17, 223, 460 |
| Fsp4HI | GCNGC | 2 cut(s) | 106, 160 |
| GluI | GCNGC | 2 cut(s) | 106, 160 |
| HaeIII | GGCC | 1 cut(s) | 108 |
| Hin1II | CATG | 1 cut(s) | 14 |
| HinfI | GANTC | 1 cut(s) | 356 |
| Hpy188I | TCNGA | 3 cut(s) | 241, 274, 421 |
| Hpy188III | TCNNGA | 2 cut(s) | 363, 405 |
| Hpy99I | CGWCG | 2 cut(s) | 376, 379 |
| HpyAV | CCTTC | 1 cut(s) | 319 |
| HpyCH4V | TGCA | 3 cut(s) | 74, 236, 467 |
| Hsp92II | CATG | 1 cut(s) | 14 |
| Ksp22I | TGATCA | 1 cut(s) | 150 |
| KspI | CCGCGG | 1 cut(s) | 106 |
| Kzo9I | GATC | 5 cut(s) | 94, 118, 150, 340, 397 |
| LmnI | GCTCC | 1 cut(s) | 289 |
| LpnPI | CCDG | 6 cut(s) | 8, 122, 135, 191, 201, 348 |
| Lsp1109I | GCAGC | 1 cut(s) | 146 |
| LweI | GCATC | 3 cut(s) | 61, 217, 245 |
| MaeIII | GTNAC | 2 cut(s) | 51, 140 |
| MalI | GATC | 5 cut(s) | 96, 120, 152, 342, 399 |
| MboI | GATC | 5 cut(s) | 94, 118, 150, 340, 397 |
| MboII | GAAGA | 3 cut(s) | 128, 347, 350 |
| MflI | RGATCY | 1 cut(s) | 118 |
| MhlI | GDGCHC | 1 cut(s) | 286 |
| MluCI | AATT | 3 cut(s) | 86, 307, 486 |
| MmeI | TCCRAC | 2 cut(s) | 264, 297 |
| MspA1I | CMGCKG | 2 cut(s) | 105, 206 |
| MvnI | CGCG | 1 cut(s) | 105 |
| NcoI | CCATGG | 1 cut(s) | 10 |
| NdeII | GATC | 5 cut(s) | 94, 118, 150, 340, 397 |
| NlaIII | CATG | 1 cut(s) | 14 |
| NmuCI | GTSAC | 1 cut(s) | 140 |
| PfeI | GAWTC | 1 cut(s) | 356 |
| PkrI | GCNGC | 2 cut(s) | 107, 161 |
| PsiI | TTATAA | 1 cut(s) | 174 |
| PspPI | GGNCC | 1 cut(s) | 474 |
| PsuI | RGATCY | 1 cut(s) | 118 |
| PvuII | CAGCTG | 1 cut(s) | 206 |
| RsaI | GTAC | 1 cut(s) | 196 |
| RsaNI | GTAC | 1 cut(s) | 195 |
| SacII | CCGCGG | 1 cut(s) | 106 |
| SatI | GCNGC | 2 cut(s) | 106, 160 |
| Sau3AI | GATC | 5 cut(s) | 94, 118, 150, 340, 397 |
| Sau96I | GGNCC | 1 cut(s) | 474 |
| ScaI | AGTACT | 1 cut(s) | 196 |
| SduI | GDGCHC | 1 cut(s) | 286 |
| SetI | ASST | 7 cut(s) | 31, 63, 147, 180, 208, 396, 413 |
| SfaNI | GCATC | 3 cut(s) | 61, 217, 245 |
| Sfr303I | CCGCGG | 1 cut(s) | 106 |
| SgrBI | CCGCGG | 1 cut(s) | 106 |
| SinI | GGWCC | 1 cut(s) | 474 |
| Sse9I | AATT | 3 cut(s) | 86, 307, 486 |
| SsiI | CCGC | 3 cut(s) | 103, 105, 472 |
| StyI | CCWWGG | 2 cut(s) | 10, 411 |
| TaqI | TCGA | 1 cut(s) | 404 |
| TaqII | GACCGA | 1 cut(s) | 390 |
| TasI | AATT | 3 cut(s) | 86, 307, 486 |
| TatI | WGTACW | 1 cut(s) | 194 |
| TauI | GCSGC | 1 cut(s) | 108 |
| TfiI | GAWTC | 1 cut(s) | 356 |
| TscAI | CASTG | 2 cut(s) | 129, 474 |
| TseFI | GTSAC | 1 cut(s) | 140 |
| TseI | GCWGC | 1 cut(s) | 159 |
| Tsp45I | GTSAC | 1 cut(s) | 140 |
| TspDTI | ATGAA | 3 cut(s) | 79, 338, 464 |
| TspRI | CASTG | 2 cut(s) | 129, 474 |
| VpaK11BI | GGWCC | 1 cut(s) | 474 |
| XapI | RAATTY | 1 cut(s) | 307 |
| ZrmI | AGTACT | 1 cut(s) | 196 |