Prupe.6G214300_v2.0.a1
MYB Family

transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
22221609 .. 22223785
2177 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G214300.1

Sequence Viewer

Length: 1134 bp
ATGGGGAGAGCTCCTTGCTGTGACAAAGCCAATGTCAAGAAAGGTCCCTGGTCACCTGAGGAAGATGCCACCCTCAAGGCTTACATTGAGAAGCATGGCACCGGCGGTAACTGGATTGCCTTGCCCCAGAAGATAGGCCTTAAAAGGTGTGGCAAAAGCTGTCGCCTTAGATGGTTGAACTATCTCCGGCCGAATATCAAGCATGGAGGTTTTTCAGAGGAAGAAGACAATATCATCTGCAGTCTCTATATAAGTATTGGAAGCAGGTGGTCTATAATTGCAGCCCAGTTACCAGGGCGAACTGACAACGACATTAAGAACTACTGGAACACAAGACTGAAGAAAAAGCTCTTGGGCAAGCAGCGCAAGCAACAACAGGCTCAGCAGAGCCGCCGTGCCGCCAGCAGCCTAAAGCAAGAGATGATTAAAAGATCAGAAAGCGCTGCAACTTTTGCTAACCTTCCAGTTGAGTTTGTGAACCAAAATCCTTACTGGGCTCCAGAGCTACCAGTGGCAGTGCCCATGGTGAATTATCAAACACATGAGCCTCAACTCATCAAGGACCAGGCTTCCATTAAGAACATGCTCATCAAACTTGGAGGAAGATTTTCAGCTGACAATACTACCACTACAACCACCAACACAAATTTTCTGTACCCTGTTGACATTTCCTCCAGCTCCTCATCAGATCATCAATTCTATCAGAACCCCATTGATGTGCTTACTTGTACTTCAGCACCCAACAACAATATTTATGCTGCTGATCAGTTTGCAAGCACACACTATGATGCTAATAATAATGGTGGGGGTTCAAGTAGTCCAACCATGTTCCAGGGCCTTGATGATCACAACAACAATCTACAGGCTGATCATCATCTGAGTGAATTGGTGGTTTATGGCAACGACTTTCCTCATCAGCATCAGCAATTGGATGGCTTCTATCAAGCGGCCGAGACGCTGAACAACGGTAGCACTGGAACTAGTACTACTTCTGCAGAGAGTGAAATTAGTTGGGGAGACATAAACTCCCTGGTTTATAGTACTCAGATGGTTTCAGACTATGAAACCTGCCAACAAAGAATGCCCACAGTTCATTCTGTCTTTGCAGAGTCAACCTACTTTGGCCTCAAATGA

Protein Analysis

378

Amino Acids

42.08

Weight (kDa)

6.83

Isoelectric Point (pI)

51.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 255
Acc36I ACCTGC 2 cut(s) 255, 1076
AccB1I GGYRCC 1 cut(s) 98
AciI CCGC 4 cut(s) 105, 391, 399, 947
AcoI YGGCCR 2 cut(s) 188, 948
AcsI RAATTY 1 cut(s) 646
AcuI CTGAAG 2 cut(s) 359, 717
AfaI GTAC 4 cut(s) 656, 730, 985, 1042
AfeI AGCGCT 1 cut(s) 442
AgsI TTSAA 2 cut(s) 178, 813
AhlI ACTAGT 1 cut(s) 980
AjnI CCWGG 5 cut(s) 47, 292, 564, 831, 1029
AjuI GAANNNNNNNTTGG 2 cut(s) 335, 367
AluBI AGCT 6 cut(s) 11, 159, 349, 505, 614, 678
AluI AGCT 6 cut(s) 11, 159, 349, 505, 614, 678
Alw21I GWGCWC 1 cut(s) 13
Alw26I GTCTC 3 cut(s) 248, 947, 1011
Aor51HI AGCGCT 1 cut(s) 442
AoxI GGCC 5 cut(s) 136, 188, 835, 948, 1123
ApeKI GCWGC 5 cut(s) 281, 361, 405, 443, 758
ApoI RAATTY 1 cut(s) 646
ArsI GACNNNNNNTTYG 2 cut(s) 18, 50
Asp700I GAANNNNTTC 1 cut(s) 607
AspLEI GCGC 2 cut(s) 366, 443
AspS9I GGNCC 3 cut(s) 44, 562, 835
AsuHPI GGTGA 2 cut(s) 45, 538
AvaII GGWCC 2 cut(s) 44, 562
AxyI CCTNAGG 1 cut(s) 57
BaeGI GKGCMC 1 cut(s) 522
BanI GGYRCC 1 cut(s) 98
BanII GRGCYC 2 cut(s) 13, 499
BbsI GAAGAC 1 cut(s) 231
Bbv12I GWGCWC 1 cut(s) 13
BbvI GCAGC 5 cut(s) 293, 373, 417, 430, 745
BccI CCATC 3 cut(s) 165, 926, 1042
BceAI ACGGC 1 cut(s) 378
BciT130I CCWGG 5 cut(s) 49, 294, 566, 833, 1031
BclI TGATCA 3 cut(s) 763, 844, 868
BcoDI GTCTC 3 cut(s) 248, 947, 1011
BcuI ACTAGT 1 cut(s) 980
BfaI CTAG 1 cut(s) 981
BfmI CTRYAG 3 cut(s) 238, 860, 993
BfoI RGCGCY 1 cut(s) 444
BfuAI ACCTGC 2 cut(s) 255, 1076
BisI GCNGC 8 cut(s) 282, 362, 391, 399, 406, 444, 759, 948
BlpI GCTNAGC 1 cut(s) 381
BlsI GCNGC 8 cut(s) 283, 363, 392, 400, 407, 445, 760, 949
BmcAI AGTACT 2 cut(s) 985, 1042
Bme1390I CCNGG 5 cut(s) 49, 294, 566, 833, 1031
Bme18I GGWCC 2 cut(s) 44, 562
BmgT120I GGNCC 3 cut(s) 44, 562, 835
BmiI GGNNCC 3 cut(s) 46, 100, 498
BmrFI CCNGG 5 cut(s) 49, 294, 566, 833, 1031
BmrI ACTGGG 2 cut(s) 280, 502
BmsI GCATC 3 cut(s) 55, 778, 928
BmuI ACTGGG 2 cut(s) 280, 502
BpiI GAAGAC 1 cut(s) 231
BpmI CTGGAG 2 cut(s) 483, 658
Bpu1102I GCTNAGC 1 cut(s) 381
BpuEI CTTGAG 1 cut(s) 59
BsaBI GATNNNNATC 1 cut(s) 873
BsaJI CCNNGG 5 cut(s) 47, 293, 522, 832, 1029
BsaXI ACNNNNNCTCC 4 cut(s) 656, 686, 1010, 1040
Bse118I RCCGGY 1 cut(s) 101
Bse1I ACTGG 7 cut(s) 116, 286, 329, 464, 497, 509, 979
Bse21I CCTNAGG 1 cut(s) 57
Bse8I GATNNNNATC 1 cut(s) 873
BseBI CCWGG 5 cut(s) 49, 294, 566, 833, 1031
BseDI CCNNGG 5 cut(s) 47, 293, 522, 832, 1029
BseGI GGATG 1 cut(s) 937
BseJI GATNNNNATC 1 cut(s) 873
BseMII CTCAG 4 cut(s) 48, 395, 869, 1058
BseNI ACTGG 7 cut(s) 116, 286, 329, 464, 497, 509, 979
BseRI GAGGAG 1 cut(s) 670
BseSI GKGCMC 1 cut(s) 522
BseX3I CGGCCG 2 cut(s) 188, 948
BseXI GCAGC 5 cut(s) 293, 373, 417, 430, 745
Bsh1285I CGRYCG 2 cut(s) 191, 951
BshFI GGCC 5 cut(s) 138, 190, 837, 950, 1125
BshNI GGYRCC 1 cut(s) 98
BsiEI CGRYCG 2 cut(s) 191, 951
BsiHKAI GWGCWC 1 cut(s) 13
BsiSI CCGG 2 cut(s) 102, 187
BslFI GGGAC 1 cut(s) 30
BsmAI GTCTC 3 cut(s) 248, 947, 1011
BsmBI CGTCTC 1 cut(s) 947
BsmFI GGGAC 1 cut(s) 30
BsmI GAATGC 1 cut(s) 1086
BsnI GGCC 5 cut(s) 138, 190, 837, 950, 1125
Bsp1286I GDGCHC 3 cut(s) 13, 499, 522
Bsp143I GATC 5 cut(s) 431, 688, 763, 844, 868
Bsp1720I GCTNAGC 1 cut(s) 381
Bsp19I CCATGG 1 cut(s) 522
BspACI CCGC 4 cut(s) 105, 391, 399, 947
BspANI GGCC 5 cut(s) 138, 190, 837, 950, 1125
BspCNI CTCAG 4 cut(s) 49, 394, 870, 1057
BspLI GGNNCC 3 cut(s) 46, 100, 498
BspMAI CTGCAG 2 cut(s) 242, 997
BspMI ACCTGC 2 cut(s) 255, 1076
BspT107I GGYRCC 1 cut(s) 98
BsrFI RCCGGY 1 cut(s) 101
BsrI ACTGG 7 cut(s) 116, 286, 329, 464, 497, 509, 979
BssAI RCCGGY 1 cut(s) 101
BssECI CCNNGG 5 cut(s) 47, 293, 522, 832, 1029
BssMI GATC 5 cut(s) 431, 688, 763, 844, 868
BssT1I CCWWGG 1 cut(s) 522
Bst2UI CCWGG 5 cut(s) 49, 294, 566, 833, 1031
Bst4CI ACNGT 2 cut(s) 968, 1090
BstAPI GCANNNNNTGC 1 cut(s) 452
BstC8I GCNNGC 4 cut(s) 359, 368, 403, 775
BstDEI CTNAG 5 cut(s) 57, 167, 381, 878, 1044
BstDSI CCRYGG 1 cut(s) 522
BstEII GGTNACC 1 cut(s) 51
BstF5I GGATG 1 cut(s) 937
BstH2I RGCGCY 1 cut(s) 444
BstHHI GCGC 2 cut(s) 366, 443
BstKTI GATC 5 cut(s) 434, 691, 766, 847, 871
BstMAI GTCTC 3 cut(s) 248, 947, 1011
BstMBI GATC 5 cut(s) 431, 688, 763, 844, 868
BstMCI CGRYCG 2 cut(s) 191, 951
BstMWI GCNNNNNNNGC 3 cut(s) 363, 367, 452
BstNI CCWGG 5 cut(s) 49, 294, 566, 833, 1031
BstNSI RCATGY 1 cut(s) 586
BstPI GGTNACC 1 cut(s) 51
BstSCI CCNGG 5 cut(s) 47, 292, 564, 831, 1029
BstSFI CTRYAG 3 cut(s) 238, 860, 993
BstSLI GKGCMC 1 cut(s) 522
BstV1I GCAGC 5 cut(s) 293, 373, 417, 430, 745
BstV2I GAAGAC 1 cut(s) 231
BstZI CGGCCG 2 cut(s) 188, 948
Bsu36I CCTNAGG 1 cut(s) 57
BsuRI GGCC 5 cut(s) 138, 190, 837, 950, 1125
BtgI CCRYGG 1 cut(s) 522
BtsCI GGATG 1 cut(s) 937
BtsI GCAGTG 1 cut(s) 522
BtsIMutI CAGTG 3 cut(s) 516, 522, 972
BveI ACCTGC 2 cut(s) 255, 1076
Cac8I GCNNGC 4 cut(s) 359, 368, 403, 775
CfoI GCGC 2 cut(s) 366, 443
Cfr10I RCCGGY 1 cut(s) 101
Cfr13I GGNCC 3 cut(s) 44, 562, 835
CseI GACGC 1 cut(s) 964
Csp6I GTAC 4 cut(s) 655, 729, 984, 1041
CviAII CATG 6 cut(s) 95, 203, 523, 542, 583, 826
CviQI GTAC 4 cut(s) 655, 729, 984, 1041
DdeI CTNAG 5 cut(s) 57, 167, 381, 878, 1044
DpnI GATC 5 cut(s) 433, 690, 765, 846, 870
DpnII GATC 5 cut(s) 431, 688, 763, 844, 868
EaeI YGGCCR 2 cut(s) 188, 948
EagI CGGCCG 2 cut(s) 188, 948
Ecl136II GAGCTC 1 cut(s) 11
EclXI CGGCCG 2 cut(s) 188, 948
Eco130I CCWWGG 1 cut(s) 522
Eco147I AGGCCT 1 cut(s) 138
Eco24I GRGCYC 2 cut(s) 13, 499
Eco47I GGWCC 2 cut(s) 44, 562
Eco47III AGCGCT 1 cut(s) 442
Eco52I CGGCCG 2 cut(s) 188, 948
Eco53kI GAGCTC 1 cut(s) 11
Eco57I CTGAAG 2 cut(s) 359, 717
Eco81I CCTNAGG 1 cut(s) 57
Eco91I GGTNACC 1 cut(s) 51
EcoICRI GAGCTC 1 cut(s) 11
EcoO109I RGGNCCY 2 cut(s) 44, 835
EcoO65I GGTNACC 1 cut(s) 51
EcoRII CCWGG 5 cut(s) 47, 292, 564, 831, 1029
EcoT14I CCWWGG 1 cut(s) 522
EcoT38I GRGCYC 2 cut(s) 13, 499
ErhI CCWWGG 1 cut(s) 522
Esp3I CGTCTC 1 cut(s) 947
FaeI CATG 6 cut(s) 98, 206, 526, 545, 586, 829
FaqI GGGAC 1 cut(s) 30
FatI CATG 6 cut(s) 94, 202, 522, 541, 582, 825
FbaI TGATCA 3 cut(s) 763, 844, 868
Fnu4HI GCNGC 8 cut(s) 282, 362, 391, 399, 406, 444, 759, 948
FokI GGATG 1 cut(s) 944
FriOI GRGCYC 2 cut(s) 13, 499
Fsp4HI GCNGC 8 cut(s) 282, 362, 391, 399, 406, 444, 759, 948
FspBI CTAG 1 cut(s) 981
GlaI GCGC 2 cut(s) 365, 442
GluI GCNGC 8 cut(s) 282, 362, 391, 399, 406, 444, 759, 948
GsuI CTGGAG 2 cut(s) 483, 658
HaeII RGCGCY 1 cut(s) 444
HaeIII GGCC 5 cut(s) 138, 190, 837, 950, 1125
HapII CCGG 2 cut(s) 102, 187
HgaI GACGC 1 cut(s) 964
HhaI GCGC 2 cut(s) 366, 443
Hin1II CATG 6 cut(s) 98, 206, 526, 545, 586, 829
Hin6I GCGC 2 cut(s) 364, 441
HinP1I GCGC 2 cut(s) 364, 441
HincII GTYRAC 2 cut(s) 664, 1113
HindII GTYRAC 2 cut(s) 664, 1113
HinfI GANTC 1 cut(s) 1109
HpaII CCGG 2 cut(s) 102, 187
HphI GGTGA 2 cut(s) 45, 538
Hpy166II GTNNAC 3 cut(s) 478, 664, 1113
Hpy188I TCNGA 7 cut(s) 217, 436, 688, 705, 879, 1047, 1057
Hpy188III TCNNGA 2 cut(s) 37, 500
Hpy8I GTNNAC 3 cut(s) 478, 664, 1113
HpyAV CCTTC 1 cut(s) 470
HpyCH4III ACNGT 2 cut(s) 968, 1090
HpyCH4V TGCA 6 cut(s) 240, 281, 446, 773, 995, 1106
HpyF10VI GCNNNNNNNGC 3 cut(s) 363, 367, 452
HpyF3I CTNAG 5 cut(s) 57, 167, 381, 878, 1044
Hsp92II CATG 6 cut(s) 98, 206, 526, 545, 586, 829
HspAI GCGC 2 cut(s) 364, 441
Ksp22I TGATCA 3 cut(s) 763, 844, 868
Kzo9I GATC 5 cut(s) 431, 688, 763, 844, 868
LmnI GCTCC 3 cut(s) 16, 502, 683
Lsp1109I GCAGC 5 cut(s) 293, 373, 417, 430, 745
LweI GCATC 3 cut(s) 55, 778, 928
MaeI CTAG 1 cut(s) 981
MaeIII GTNAC 4 cut(s) 20, 51, 107, 288
MalI GATC 5 cut(s) 433, 690, 765, 846, 870
MboI GATC 5 cut(s) 431, 688, 763, 844, 868
MboII GAAGA 6 cut(s) 74, 142, 233, 236, 352, 615
MfeI CAATTG 1 cut(s) 926
MhlI GDGCHC 3 cut(s) 13, 499, 522
MluCI AATT 7 cut(s) 276, 529, 646, 695, 884, 926, 1005
MlyI GAGTC 1 cut(s) 1118
MmeI TCCRAC 1 cut(s) 845
MnlI CCTC 9 cut(s) 52, 83, 200, 211, 558, 593, 682, 691, 921
MroXI GAANNNNTTC 1 cut(s) 607
MseI TTAA 4 cut(s) 141, 315, 426, 576
MslI CAYNNNNRTG 3 cut(s) 716, 786, 879
MspA1I CMGCKG 1 cut(s) 614
MspI CCGG 2 cut(s) 102, 187
MspR9I CCNGG 5 cut(s) 49, 294, 566, 833, 1031
MunI CAATTG 1 cut(s) 926
Mva1269I GAATGC 1 cut(s) 1086
MvaI CCWGG 5 cut(s) 49, 294, 566, 833, 1031
MwoI GCNNNNNNNGC 3 cut(s) 363, 367, 452
NcoI CCATGG 1 cut(s) 522
NdeII GATC 5 cut(s) 431, 688, 763, 844, 868
NlaIII CATG 6 cut(s) 98, 206, 526, 545, 586, 829
NlaIV GGNNCC 3 cut(s) 46, 100, 498
NmeAIII GCCGAG 1 cut(s) 976
NmuCI GTSAC 2 cut(s) 20, 51
NspI RCATGY 1 cut(s) 586
PaqCI CACCTGC 1 cut(s) 255
PceI AGGCCT 1 cut(s) 138
PctI GAATGC 1 cut(s) 1086
PdmI GAANNNNTTC 1 cut(s) 607
PkrI GCNGC 8 cut(s) 283, 363, 392, 400, 407, 445, 760, 949
PleI GAGTC 1 cut(s) 1117
PpsI GAGTC 1 cut(s) 1117
PpuMI RGGWCCY 1 cut(s) 44
Psp124BI GAGCTC 1 cut(s) 13
Psp5II RGGWCCY 1 cut(s) 44
Psp6I CCWGG 5 cut(s) 47, 292, 564, 831, 1029
PspEI GGTNACC 1 cut(s) 51
PspGI CCWGG 5 cut(s) 47, 292, 564, 831, 1029
PspN4I GGNNCC 3 cut(s) 46, 100, 498
PspPI GGNCC 3 cut(s) 44, 562, 835
PspPPI RGGWCCY 1 cut(s) 44
PsrI GAACNNNNNNTAC 2 cut(s) 970, 1002
PstI CTGCAG 2 cut(s) 242, 997
PvuII CAGCTG 1 cut(s) 614
RsaI GTAC 4 cut(s) 656, 730, 985, 1042
RsaNI GTAC 4 cut(s) 655, 729, 984, 1041
RseI CAYNNNNRTG 3 cut(s) 716, 786, 879
SacI GAGCTC 1 cut(s) 13
SaqAI TTAA 4 cut(s) 141, 315, 426, 576
SatI GCNGC 8 cut(s) 282, 362, 391, 399, 406, 444, 759, 948
Sau3AI GATC 5 cut(s) 431, 688, 763, 844, 868
Sau96I GGNCC 3 cut(s) 44, 562, 835
ScaI AGTACT 2 cut(s) 985, 1042
SchI GAGTC 1 cut(s) 1118
ScrFI CCNGG 5 cut(s) 49, 294, 566, 833, 1031
SduI GDGCHC 3 cut(s) 13, 499, 522
SfaNI GCATC 3 cut(s) 55, 778, 928
SfcI CTRYAG 3 cut(s) 238, 860, 993
SgrAI CRCCGGYG 1 cut(s) 101
SinI GGWCC 2 cut(s) 44, 562
SmiMI CAYNNNNRTG 3 cut(s) 716, 786, 879
SmlI CTYRAG 1 cut(s) 74
SmoI CTYRAG 1 cut(s) 74
SpeI ACTAGT 1 cut(s) 980
Sse9I AATT 7 cut(s) 276, 529, 646, 695, 884, 926, 1005
SseBI AGGCCT 1 cut(s) 138
SsiI CCGC 4 cut(s) 105, 391, 399, 947
SspI AATATT 1 cut(s) 751
SspMI CTAG 1 cut(s) 981
SstI GAGCTC 1 cut(s) 13
StuI AGGCCT 1 cut(s) 138
StyD4I CCNGG 5 cut(s) 47, 292, 564, 831, 1029
StyI CCWWGG 1 cut(s) 522
TaaI ACNGT 2 cut(s) 968, 1090
TasI AATT 7 cut(s) 276, 529, 646, 695, 884, 926, 1005
TatI WGTACW 3 cut(s) 728, 983, 1040
TauI GCSGC 3 cut(s) 393, 401, 950
Tru1I TTAA 4 cut(s) 141, 315, 426, 576
Tru9I TTAA 4 cut(s) 141, 315, 426, 576
TscAI CASTG 3 cut(s) 516, 522, 979
TseFI GTSAC 2 cut(s) 20, 51
TseI GCWGC 5 cut(s) 281, 361, 405, 443, 758
Tsp45I GTSAC 2 cut(s) 20, 51
TspDTI ATGAA 2 cut(s) 1077, 1082
TspRI CASTG 3 cut(s) 516, 522, 979
VpaK11BI GGWCC 2 cut(s) 44, 562
XapI RAATTY 1 cut(s) 646
XceI RCATGY 1 cut(s) 586
XmnI GAANNNNTTC 1 cut(s) 607
XspI CTAG 1 cut(s) 981
ZrmI AGTACT 2 cut(s) 985, 1042
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.