Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0003649

Physical Location & Seq

Genomic Coordinates Forward (+)

2063719 .. 2065729

Gene Structure 2011 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00158720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1218 bp

ATGGGGAGAGCTCCTTGTTGTGACAAAGCGAACGTGAAGAGAGGACCGTGGTCACCTGAAGAAGATTCCAAGCTCAAGTCGTATATTGAACTACACGGCACTGGTGGTAACTGGATTGCTTTGCCTCAAAAGATCGGGCTTAAGAGATGTGGGAAGAGCTGCCGGCTGAGATGGTTAAACTATCTGCGCCCGAACATCAAGCATGGAGGGTTTTCTGAAGAAGAGGACAACTTAATTTGCAGCCTCTATATAAGTATTGGAAGCAGGTGGTCTATAATTGCAGCACAACTGCCTGGAAGAACTGATAATGATATAAAGAACTACTGGAACACAAGGCTGAAGAAAAAGCTTCTGGGAAAGCACCGCAAGGAACACCAGGCTGCTGCGCGTAGATCCGCTGCAGGCCTAAAACAGCAAGAAATTATCAAAAGAGGTCTCATCATCAGTAGTGGGAACAATAATTCCATGGTGAATCCTGTGGCAGCAGCTAGCCAAAACCCTTACTGGCCCGAGCTACCTGTGCTCCAAGTACCATCGATACCCAATTACTCATCCGTAGTACCTTCTTTCAATGACCATGCGTCTATCCGAAAACTGCTTATCAAGCTCGGAGGAAGATTTCATTCAGATCATCACGACAATGTTGCTCAACCTAATATCCAAGATGTGTACTCCTCGAATGGCGATATTCAACTCCCAGTTGATCAATTTCCTAGCTCAACGCAACAGATTTATCACGAGGAGTCGGCAGCCAATATGCACTCATCTGCTAGCCTGATTGAGGCTTTAGCCAGTGACAATATCAGCAACCCGGGCCAATTTGCACAAATGAACCACTACAACAACCCCGCGGATAATGCTGGTGGTGCTGTGAACATGTTTCAAGGAGGGCAAAGTAGTAACTATTTTCTGTCGAACGAGCTTAAGGACATGGTGTACAATATTGATCCAGAAAAGTTAGATGCGCTGGAGTTCTTATACAGTGAAGACGTCATGATCATGATGAATGATAGACCGATTAGCAGTACTACTAATACTAGTACTAGTTATGGTGATCAAAGTACGATTGAGTGGAGTGGTGATCAGATGCAGCTGGTTTATCCTCCTCCTCTAGCTGCCTCAGGCTCAGACTATCATGAAGGCATGCAGAGAATGATAATGCCTCAAGATCAATGCGCTAATCTCAGCGGTAGTTACCCTGGGGATGGGGTACAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0009719 GO:0009725 GO:0009751 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

405

Amino Acids

44.92

Weight (kDa)

6.31

Isoelectric Point (pI)

52.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	14 - 62	6.1e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	17 - 77	1.9e-11	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	69 - 112	7.8e-13	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	71 - 116	4.1e-06	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003649)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49690 AT5G65790
fragaria_vesca	FvH4_1g18500 FvH4_1g18500 FvH4_2g32440
malus_domestica	MD02G1191000.v1.1 MD08G1076200.v1.1 MD15G1063300.v1.1 MD15G1302300.v1.1
prunus_persica	Prupe.1G417400_v2.0.a1 Prupe.6G214300_v2.0.a1
pyrus_communis	pycom02g15540 pycom08g06310 pycom15g06010 pycom15g26540
rosa_chinensis	RchiOBHm_Chr2g0109131 RchiOBHm_Chr6g0310231
rosa_laevigata	RLG00000010497 RLG00000017715
rosa_multiflora	Rmu_sc0000186.1_g000014 Rmu_sc0002348.1_g000027
rosa_roxburghii	Rroxscaffold_2G00134480 Rroxscaffold_7G00158720
rosa_rugosa	Rorug02G0157300 Rorug06G0378300 Rorug06G0378400
rosa_samantha	Rh2AG209400 Rh2BG219800 Rh2CG211900 Rh2DG215500 Rh6AG492500 Rh6BG502200 Rh6CG507100 Rh6DG493300
rosa_wichuraiana	Rw6G042860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	255
AatII	GACGTC	1 cut(s)	993
Acc36I	ACCTGC	1 cut(s)	255
AccII	CGCG	2 cut(s)	388, 851
AciI	CCGC	5 cut(s)	364, 396, 849, 851, 1188
AclWI	GGATC	2 cut(s)	387, 941
AcuI	CTGAAG	3 cut(s)	78, 237, 359
AcyI	GRCGYC	1 cut(s)	990
AfaI	GTAC	8 cut(s)	531, 561, 671, 938, 1027, 1042, 1063, 1212
AfiI	CCNNNNNNNGG	2 cut(s)	781, 1205
AflII	CTTAAG	2 cut(s)	140, 923
AflIII	ACRYGT	1 cut(s)	876
AgsI	TTSAA	4 cut(s)	89, 571, 692, 884
AhdI	GACNNNNNGTC	1 cut(s)	580
AhlI	ACTAGT	2 cut(s)	1037, 1043
AjnI	CCWGG	3 cut(s)	292, 375, 1198
AloI	GAACNNNNNNTCC	2 cut(s)	446, 478
Alw21I	GWGCWC	2 cut(s)	13, 525
Alw26I	GTCTC	1 cut(s)	440
AlwI	GGATC	2 cut(s)	387, 941
Ama87I	CYCGRG	2 cut(s)	509, 811
AoxI	GGCC	3 cut(s)	403, 506, 814
AspLEI	GCGC	4 cut(s)	189, 388, 967, 1178
AspS9I	GGNCC	3 cut(s)	44, 507, 814
AsuC2I	CCSGG	2 cut(s)	812, 813
AsuHPI	GGTGA	4 cut(s)	45, 481, 1064, 1091
AsuNHI	GCTAGC	2 cut(s)	488, 770
AvaI	CYCGRG	2 cut(s)	509, 811
AvaII	GGWCC	1 cut(s)	44
AxyI	CCTNAGG	1 cut(s)	1120
BanII	GRGCYC	1 cut(s)	13
BauI	CACGAG	1 cut(s)	737
BbsI	GAAGAC	1 cut(s)	993
Bbv12I	GWGCWC	2 cut(s)	13, 525
BccI	CCATC	3 cut(s)	165, 541, 1199
BceAI	ACGGC	1 cut(s)	112
BcgI	CGANNNNNNTGC	2 cut(s)	626, 660
BciT130I	CCWGG	3 cut(s)	294, 377, 1200
BclI	TGATCA	4 cut(s)	703, 996, 1054, 1081
BcnI	CCSGG	2 cut(s)	812, 813
BcoDI	GTCTC	1 cut(s)	440
BcuI	ACTAGT	2 cut(s)	1037, 1043
BfaI	CTAG	6 cut(s)	489, 714, 771, 1038, 1044, 1112
BfmI	CTRYAG	1 cut(s)	399
BfrI	CTTAAG	2 cut(s)	140, 923
BfuAI	ACCTGC	1 cut(s)	255
BmcAI	AGTACT	2 cut(s)	1027, 1042
Bme1390I	CCNGG	5 cut(s)	294, 377, 812, 813, 1200
Bme18I	GGWCC	1 cut(s)	44
BmeRI	GACNNNNNGTC	1 cut(s)	580
BmeT110I	CYCGRG	2 cut(s)	509, 811
BmgT120I	GGNCC	3 cut(s)	44, 507, 814
BmrFI	CCNGG	5 cut(s)	294, 377, 812, 813, 1200
BmrI	ACTGGG	1 cut(s)	692
BmsI	GCATC	2 cut(s)	952, 1077
BmtI	GCTAGC	2 cut(s)	492, 774
BmuI	ACTGGG	1 cut(s)	692
BoxI	GACNNNNGTC	1 cut(s)	49
BpiI	GAAGAC	1 cut(s)	993
BpmI	CTGGAG	1 cut(s)	989
BpuEI	CTTGAG	2 cut(s)	59, 1149
BpuMI	CCSGG	2 cut(s)	812, 813
Bsa29I	ATCGAT	1 cut(s)	536
BsaHI	GRCGYC	1 cut(s)	990
BsaI	GGTCTC	1 cut(s)	440
BsaJI	CCNNGG	6 cut(s)	47, 465, 811, 849, 1198, 1199
BsaXI	ACNNNNNCTCC	2 cut(s)	507, 537
Bsc4I	CCNNNNNNNGG	2 cut(s)	781, 1205
Bse118I	RCCGGY	1 cut(s)	162
Bse1I	ACTGG	6 cut(s)	106, 116, 329, 509, 698, 792
Bse21I	CCTNAGG	1 cut(s)	1120
BseBI	CCWGG	3 cut(s)	294, 377, 1200
BseCI	ATCGAT	1 cut(s)	536
BseDI	CCNNGG	6 cut(s)	47, 465, 811, 849, 1198, 1199
BseGI	GGATG	2 cut(s)	551, 1210
BseLI	CCNNNNNNNGG	2 cut(s)	781, 1205
BseMII	CTCAG	4 cut(s)	158, 1134, 1140, 1198
BseNI	ACTGG	6 cut(s)	106, 116, 329, 509, 698, 792
BseRI	GAGGAG	4 cut(s)	664, 755, 1095, 1098
Bsh1236I	CGCG	2 cut(s)	388, 851
BshFI	GGCC	3 cut(s)	405, 508, 816
BshVI	ATCGAT	1 cut(s)	536
BsiHKAI	GWGCWC	2 cut(s)	13, 525
BsiHKCI	CYCGRG	2 cut(s)	509, 811
BsiSI	CCGG	2 cut(s)	163, 812
BslI	CCNNNNNNNGG	2 cut(s)	781, 1205
BsmAI	GTCTC	1 cut(s)	440
BsnI	GGCC	3 cut(s)	405, 508, 816
Bso31I	GGTCTC	1 cut(s)	440
BsoBI	CYCGRG	2 cut(s)	509, 811
Bsp1286I	GDGCHC	2 cut(s)	13, 525
Bsp1407I	TGTACA	1 cut(s)	936
Bsp143I	GATC	9 cut(s)	132, 392, 628, 703, 946, 996, 1054, 1081, 1168
Bsp19I	CCATGG	1 cut(s)	465
BspACI	CCGC	5 cut(s)	364, 396, 849, 851, 1188
BspANI	GGCC	3 cut(s)	405, 508, 816
BspCNI	CTCAG	4 cut(s)	159, 1133, 1139, 1197
BspDI	ATCGAT	1 cut(s)	536
BspFNI	CGCG	2 cut(s)	388, 851
BspHI	TCATGA	3 cut(s)	993, 999, 1135
BspMAI	CTGCAG	1 cut(s)	403
BspMI	ACCTGC	1 cut(s)	255
BspOI	GCTAGC	2 cut(s)	492, 774
BspPI	GGATC	2 cut(s)	387, 941
BspQI	GCTCTTC	1 cut(s)	149
BspTI	CTTAAG	2 cut(s)	140, 923
BspTNI	GGTCTC	1 cut(s)	440
BsrFI	RCCGGY	1 cut(s)	162
BsrGI	TGTACA	1 cut(s)	936
BsrI	ACTGG	6 cut(s)	106, 116, 329, 509, 698, 792
BssAI	RCCGGY	1 cut(s)	162
BssECI	CCNNGG	6 cut(s)	47, 465, 811, 849, 1198, 1199
BssMI	GATC	9 cut(s)	132, 392, 628, 703, 946, 996, 1054, 1081, 1168
BssNI	GRCGYC	1 cut(s)	990
BssSI	CACGAG	1 cut(s)	737
BssT1I	CCWWGG	1 cut(s)	465
Bst2BI	CACGAG	1 cut(s)	737
Bst2UI	CCWGG	3 cut(s)	294, 377, 1200
Bst4CI	ACNGT	2 cut(s)	48, 983
Bst6I	CTCTTC	3 cut(s)	32, 149, 216
BstACI	GRCGYC	1 cut(s)	990
BstAFI	CTTAAG	2 cut(s)	140, 923
BstAUI	TGTACA	1 cut(s)	936
BstC8I	GCNNGC	5 cut(s)	164, 403, 490, 772, 1145
BstDEI	CTNAG	4 cut(s)	167, 1120, 1126, 1184
BstDSI	CCRYGG	3 cut(s)	47, 465, 849
BstEII	GGTNACC	1 cut(s)	51
BstENI	CCTNNNNNAGG	1 cut(s)	779
BstF5I	GGATG	2 cut(s)	551, 1210
BstFNI	CGCG	2 cut(s)	388, 851
BstHHI	GCGC	4 cut(s)	189, 388, 967, 1178
BstKTI	GATC	9 cut(s)	135, 395, 631, 706, 949, 999, 1057, 1084, 1171
BstMAI	GTCTC	1 cut(s)	440
BstMBI	GATC	9 cut(s)	132, 392, 628, 703, 946, 996, 1054, 1081, 1168
BstMWI	GCNNNNNNNGC	5 cut(s)	520, 604, 813, 857, 866
BstNI	CCWGG	3 cut(s)	294, 377, 1200
BstNSI	RCATGY	2 cut(s)	880, 1147
BstPAI	GACNNNNGTC	1 cut(s)	49
BstPI	GGTNACC	1 cut(s)	51
BstSCI	CCNGG	5 cut(s)	292, 375, 810, 811, 1198
BstSFI	CTRYAG	1 cut(s)	399
BstUI	CGCG	2 cut(s)	388, 851
BstV2I	GAAGAC	1 cut(s)	993
BstX2I	RGATCY	1 cut(s)	392
BstYI	RGATCY	1 cut(s)	392
Bsu15I	ATCGAT	1 cut(s)	536
Bsu36I	CCTNAGG	1 cut(s)	1120
BsuRI	GGCC	3 cut(s)	405, 508, 816
BsuTUI	ATCGAT	1 cut(s)	536
BtgI	CCRYGG	3 cut(s)	47, 465, 849
BtsCI	GGATG	2 cut(s)	551, 1210
BtsIMutI	CAGTG	3 cut(s)	99, 799, 988
BveI	ACCTGC	1 cut(s)	255
Cac8I	GCNNGC	5 cut(s)	164, 403, 490, 772, 1145
CciI	TCATGA	3 cut(s)	993, 999, 1135
CfoI	GCGC	4 cut(s)	189, 388, 967, 1178
Cfr10I	RCCGGY	1 cut(s)	162
Cfr13I	GGNCC	3 cut(s)	44, 507, 814
Cfr42I	CCGCGG	1 cut(s)	852
Cfr9I	CCCGGG	1 cut(s)	811
ClaI	ATCGAT	1 cut(s)	536
CseI	GACGC	1 cut(s)	570
Csp6I	GTAC	8 cut(s)	530, 560, 670, 937, 1026, 1041, 1062, 1211
CviAII	CATG	9 cut(s)	203, 466, 578, 877, 931, 994, 1000, 1136, 1144
CviQI	GTAC	8 cut(s)	530, 560, 670, 937, 1026, 1041, 1062, 1211
DdeI	CTNAG	4 cut(s)	167, 1120, 1126, 1184
DpnI	GATC	9 cut(s)	134, 394, 630, 705, 948, 998, 1056, 1083, 1170
DpnII	GATC	9 cut(s)	132, 392, 628, 703, 946, 996, 1054, 1081, 1168
DriI	GACNNNNNGTC	1 cut(s)	580
Eam1104I	CTCTTC	3 cut(s)	32, 149, 216
Eam1105I	GACNNNNNGTC	1 cut(s)	580
EarI	CTCTTC	3 cut(s)	32, 149, 216
Ecl136II	GAGCTC	1 cut(s)	11
Eco130I	CCWWGG	1 cut(s)	465
Eco147I	AGGCCT	1 cut(s)	405
Eco24I	GRGCYC	1 cut(s)	13
Eco31I	GGTCTC	1 cut(s)	440
Eco47I	GGWCC	1 cut(s)	44
Eco53kI	GAGCTC	1 cut(s)	11
Eco57I	CTGAAG	3 cut(s)	78, 237, 359
Eco81I	CCTNAGG	1 cut(s)	1120
Eco88I	CYCGRG	2 cut(s)	509, 811
Eco91I	GGTNACC	1 cut(s)	51
EcoICRI	GAGCTC	1 cut(s)	11
EcoNI	CCTNNNNNAGG	1 cut(s)	779
EcoO65I	GGTNACC	1 cut(s)	51
EcoRII	CCWGG	3 cut(s)	292, 375, 1198
EcoT14I	CCWWGG	1 cut(s)	465
EcoT38I	GRGCYC	1 cut(s)	13
ErhI	CCWWGG	1 cut(s)	465
FaeI	CATG	9 cut(s)	206, 469, 581, 880, 934, 997, 1003, 1139, 1147
FatI	CATG	9 cut(s)	202, 465, 577, 876, 930, 993, 999, 1135, 1143
FauI	CCCGC	1 cut(s)	856
FbaI	TGATCA	4 cut(s)	703, 996, 1054, 1081
FokI	GGATG	1 cut(s)	538
FriOI	GRGCYC	1 cut(s)	13
FspBI	CTAG	6 cut(s)	489, 714, 771, 1038, 1044, 1112
GlaI	GCGC	4 cut(s)	188, 387, 966, 1177
GsuI	CTGGAG	1 cut(s)	989
HaeIII	GGCC	3 cut(s)	405, 508, 816
HapII	CCGG	2 cut(s)	163, 812
HgaI	GACGC	1 cut(s)	570
HhaI	GCGC	4 cut(s)	189, 388, 967, 1178
Hin1I	GRCGYC	1 cut(s)	990
Hin1II	CATG	9 cut(s)	206, 469, 581, 880, 934, 997, 1003, 1139, 1147
Hin6I	GCGC	4 cut(s)	187, 386, 965, 1176
HinP1I	GCGC	4 cut(s)	187, 386, 965, 1176
HindIII	AAGCTT	1 cut(s)	347
HinfI	GANTC	3 cut(s)	65, 472, 743
HpaII	CCGG	2 cut(s)	163, 812
HphI	GGTGA	4 cut(s)	45, 481, 1064, 1091
Hpy166II	GTNNAC	3 cut(s)	670, 874, 937
Hpy188I	TCNGA	6 cut(s)	217, 590, 611, 628, 1086, 1129
Hpy188III	TCNNGA	7 cut(s)	635, 737, 950, 994, 1000, 1136, 1166
Hpy8I	GTNNAC	3 cut(s)	670, 874, 937
HpyAV	CCTTC	2 cut(s)	573, 1133
HpyCH4III	ACNGT	2 cut(s)	48, 983
HpyCH4IV	ACGT	2 cut(s)	33, 990
HpyCH4V	TGCA	7 cut(s)	240, 281, 401, 760, 824, 1090, 1147
HpyF10VI	GCNNNNNNNGC	5 cut(s)	520, 604, 813, 857, 866
HpyF3I	CTNAG	4 cut(s)	167, 1120, 1126, 1184
HpySE526I	ACGT	2 cut(s)	33, 990
Hsp92I	GRCGYC	1 cut(s)	990
Hsp92II	CATG	9 cut(s)	206, 469, 581, 880, 934, 997, 1003, 1139, 1147
HspAI	GCGC	4 cut(s)	187, 386, 965, 1176
KroI	GCCGGC	1 cut(s)	162
KroNI	GCCGGC	1 cut(s)	164
Ksp22I	TGATCA	4 cut(s)	703, 996, 1054, 1081
KspI	CCGCGG	1 cut(s)	852
Kzo9I	GATC	9 cut(s)	132, 392, 628, 703, 946, 996, 1054, 1081, 1168
LguI	GCTCTTC	1 cut(s)	149
LmnI	GCTCC	2 cut(s)	16, 528
LweI	GCATC	2 cut(s)	952, 1077
MaeI	CTAG	6 cut(s)	489, 714, 771, 1038, 1044, 1112
MaeII	ACGT	2 cut(s)	33, 990
MaeIII	GTNAC	6 cut(s)	20, 51, 107, 794, 899, 1193
MalI	GATC	9 cut(s)	134, 394, 630, 705, 948, 998, 1056, 1083, 1170
MboI	GATC	9 cut(s)	132, 392, 628, 703, 946, 996, 1054, 1081, 1168
MflI	RGATCY	1 cut(s)	392
MhlI	GDGCHC	2 cut(s)	13, 525
MluCI	AATT	7 cut(s)	234, 276, 420, 460, 544, 707, 818
MlyI	GAGTC	1 cut(s)	752
MroNI	GCCGGC	1 cut(s)	162
MseI	TTAA	4 cut(s)	141, 176, 233, 924
MslI	CAYNNNNRTG	2 cut(s)	639, 998
MspA1I	CMGCKG	4 cut(s)	398, 851, 1093, 1188
MspCI	CTTAAG	2 cut(s)	140, 923
MspI	CCGG	2 cut(s)	163, 812
MspR9I	CCNGG	5 cut(s)	294, 377, 812, 813, 1200
MvaI	CCWGG	3 cut(s)	294, 377, 1200
MvnI	CGCG	2 cut(s)	388, 851
MwoI	GCNNNNNNNGC	5 cut(s)	520, 604, 813, 857, 866
NaeI	GCCGGC	1 cut(s)	164
NciI	CCSGG	2 cut(s)	812, 813
NcoI	CCATGG	1 cut(s)	465
NdeII	GATC	9 cut(s)	132, 392, 628, 703, 946, 996, 1054, 1081, 1168
NgoMIV	GCCGGC	1 cut(s)	162
NheI	GCTAGC	2 cut(s)	488, 770
NlaIII	CATG	9 cut(s)	206, 469, 581, 880, 934, 997, 1003, 1139, 1147
NmuCI	GTSAC	3 cut(s)	20, 51, 794
NspI	RCATGY	2 cut(s)	880, 1147
PaeI	GCATGC	1 cut(s)	1147
PagI	TCATGA	3 cut(s)	993, 999, 1135
PaqCI	CACCTGC	1 cut(s)	255
PasI	CCCWGGG	1 cut(s)	1199
PceI	AGGCCT	1 cut(s)	405
PciI	ACATGT	1 cut(s)	876
PciSI	GCTCTTC	1 cut(s)	149
PdiI	GCCGGC	1 cut(s)	164
PfeI	GAWTC	2 cut(s)	65, 472
PleI	GAGTC	1 cut(s)	751
PpsI	GAGTC	1 cut(s)	751
PscI	ACATGT	1 cut(s)	876
PshAI	GACNNNNGTC	1 cut(s)	49
Psp124BI	GAGCTC	1 cut(s)	13
Psp6I	CCWGG	3 cut(s)	292, 375, 1198
PspEI	GGTNACC	1 cut(s)	51
PspGI	CCWGG	3 cut(s)	292, 375, 1198
PspPI	GGNCC	3 cut(s)	44, 507, 814
PstI	CTGCAG	1 cut(s)	403
PsuI	RGATCY	1 cut(s)	392
PvuII	CAGCTG	1 cut(s)	1093
RsaI	GTAC	8 cut(s)	531, 561, 671, 938, 1027, 1042, 1063, 1212
RsaNI	GTAC	8 cut(s)	530, 560, 670, 937, 1026, 1041, 1062, 1211
RseI	CAYNNNNRTG	2 cut(s)	639, 998
SacI	GAGCTC	1 cut(s)	13
SacII	CCGCGG	1 cut(s)	852
SapI	GCTCTTC	1 cut(s)	149
SaqAI	TTAA	4 cut(s)	141, 176, 233, 924
Sau3AI	GATC	9 cut(s)	132, 392, 628, 703, 946, 996, 1054, 1081, 1168
Sau96I	GGNCC	3 cut(s)	44, 507, 814
ScaI	AGTACT	2 cut(s)	1027, 1042
SchI	GAGTC	1 cut(s)	752
ScrFI	CCNGG	5 cut(s)	294, 377, 812, 813, 1200
SduI	GDGCHC	2 cut(s)	13, 525
SfaNI	GCATC	2 cut(s)	952, 1077
SfcI	CTRYAG	1 cut(s)	399
Sfr303I	CCGCGG	1 cut(s)	852
SgrBI	CCGCGG	1 cut(s)	852
SinI	GGWCC	1 cut(s)	44
SmaI	CCCGGG	1 cut(s)	813
SmiMI	CAYNNNNRTG	2 cut(s)	639, 998
SmlI	CTYRAG	4 cut(s)	74, 140, 923, 1164
SmoI	CTYRAG	4 cut(s)	74, 140, 923, 1164
SpeI	ACTAGT	2 cut(s)	1037, 1043
SphI	GCATGC	1 cut(s)	1147
Sse9I	AATT	7 cut(s)	234, 276, 420, 460, 544, 707, 818
SseBI	AGGCCT	1 cut(s)	405
SsiI	CCGC	5 cut(s)	364, 396, 849, 851, 1188
SspI	AATATT	1 cut(s)	943
SspMI	CTAG	6 cut(s)	489, 714, 771, 1038, 1044, 1112
SstI	GAGCTC	1 cut(s)	13
StuI	AGGCCT	1 cut(s)	405
StyD4I	CCNGG	5 cut(s)	292, 375, 810, 811, 1198
StyI	CCWWGG	1 cut(s)	465
TaaI	ACNGT	2 cut(s)	48, 983
TaiI	ACGT	2 cut(s)	36, 993
TaqI	TCGA	3 cut(s)	536, 677, 914
TaqII	GACCGA	1 cut(s)	1030
TasI	AATT	7 cut(s)	234, 276, 420, 460, 544, 707, 818
TatI	WGTACW	4 cut(s)	669, 936, 1025, 1040
TfiI	GAWTC	2 cut(s)	65, 472
Tru1I	TTAA	4 cut(s)	141, 176, 233, 924
Tru9I	TTAA	4 cut(s)	141, 176, 233, 924
TscAI	CASTG	3 cut(s)	106, 799, 988
TseFI	GTSAC	3 cut(s)	20, 51, 794
Tsp45I	GTSAC	3 cut(s)	20, 51, 794
TspDTI	ATGAA	4 cut(s)	611, 845, 1019, 1152
TspGWI	ACGGA	1 cut(s)	544
TspMI	CCCGGG	1 cut(s)	811
TspRI	CASTG	3 cut(s)	106, 799, 988
Vha464I	CTTAAG	2 cut(s)	140, 923
VpaK11BI	GGWCC	1 cut(s)	44
XagI	CCTNNNNNAGG	1 cut(s)	779
XceI	RCATGY	2 cut(s)	880, 1147
XmaI	CCCGGG	1 cut(s)	811
XspI	CTAG	6 cut(s)	489, 714, 771, 1038, 1044, 1112
ZraI	GACGTC	1 cut(s)	991
ZrmI	AGTACT	2 cut(s)	1027, 1042

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.