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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G72810 |
| fragaria_vesca | FvH4_6g34290 |
| malus_domestica | MD02G1014500.v1.1 MD09G1187000.v1.1 MD17G1171300.v1.1 |
| prunus_persica | Prupe.3G044400_v2.0.a1 Prupe.6G348900_v2.0.a1 |
| pyrus_communis | pycom02g01320 pycom02g01380 pycom09g10360 |
| rosa_chinensis | RchiOBHm_Chr2g0144621 |
| rosa_laevigata | RLG00000020095 |
| rosa_multiflora | Rmu_co8042306.1_g000001 Rmu_sc0009300.1_g000001 |
| rosa_rugosa | Rorug02G0388200 Rorug05G0056000 |
| rosa_samantha | Rh2AG440200 Rh2BG450100 Rh2BG450600 Rh2CG427300 Rh2DG460000 Rh2DG460600 Rh4BG120100 Rh5BG145500 Rh5BG145600 Rh6AG467600 Rh7CG089000 |
| rosa_wichuraiana | Rw2G036010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 371 |
| AcyI | GRCGYC | 1 cut(s) | 368 |
| AfaI | GTAC | 3 cut(s) | 188, 308, 361 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 26, 211 |
| AgsI | TTSAA | 1 cut(s) | 301 |
| AluBI | AGCT | 1 cut(s) | 172 |
| AluI | AGCT | 1 cut(s) | 172 |
| Alw26I | GTCTC | 2 cut(s) | 62, 111 |
| AoxI | GGCC | 1 cut(s) | 348 |
| ApeKI | GCWGC | 1 cut(s) | 401 |
| AspS9I | GGNCC | 2 cut(s) | 147, 349 |
| AsuHPI | GGTGA | 2 cut(s) | 9, 226 |
| AvaII | GGWCC | 1 cut(s) | 147 |
| BauI | CACGAG | 1 cut(s) | 120 |
| BbsI | GAAGAC | 2 cut(s) | 86, 371 |
| BbvI | GCAGC | 1 cut(s) | 388 |
| BccI | CCATC | 2 cut(s) | 205, 241 |
| BceAI | ACGGC | 1 cut(s) | 286 |
| BclI | TGATCA | 1 cut(s) | 138 |
| BcoDI | GTCTC | 2 cut(s) | 62, 111 |
| BfaI | CTAG | 1 cut(s) | 426 |
| BisI | GCNGC | 1 cut(s) | 402 |
| BlsI | GCNGC | 1 cut(s) | 403 |
| Bme18I | GGWCC | 1 cut(s) | 147 |
| BmgT120I | GGNCC | 2 cut(s) | 147, 349 |
| BmiI | GGNNCC | 1 cut(s) | 148 |
| BmsI | GCATC | 1 cut(s) | 282 |
| BpiI | GAAGAC | 2 cut(s) | 86, 371 |
| BpmI | CTGGAG | 1 cut(s) | 191 |
| BsaBI | GATNNNNATC | 1 cut(s) | 251 |
| BsaHI | GRCGYC | 1 cut(s) | 368 |
| BsaJI | CCNNGG | 3 cut(s) | 25, 129, 393 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 26, 211 |
| Bse8I | GATNNNNATC | 1 cut(s) | 251 |
| BseDI | CCNNGG | 3 cut(s) | 25, 129, 393 |
| BseJI | GATNNNNATC | 1 cut(s) | 251 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 26, 211 |
| BseXI | GCAGC | 1 cut(s) | 388 |
| Bsh1285I | CGRYCG | 1 cut(s) | 399 |
| BshFI | GGCC | 1 cut(s) | 350 |
| BsiEI | CGRYCG | 1 cut(s) | 399 |
| BslFI | GGGAC | 1 cut(s) | 160 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 26, 211 |
| BsmAI | GTCTC | 2 cut(s) | 62, 111 |
| BsmBI | CGTCTC | 1 cut(s) | 111 |
| BsmFI | GGGAC | 1 cut(s) | 160 |
| BsnI | GGCC | 1 cut(s) | 350 |
| Bsp143I | GATC | 1 cut(s) | 138 |
| Bsp19I | CCATGG | 1 cut(s) | 129 |
| BspANI | GGCC | 1 cut(s) | 350 |
| BspLI | GGNNCC | 1 cut(s) | 148 |
| BssECI | CCNNGG | 3 cut(s) | 25, 129, 393 |
| BssMI | GATC | 1 cut(s) | 138 |
| BssNI | GRCGYC | 1 cut(s) | 368 |
| BssSI | CACGAG | 1 cut(s) | 120 |
| BssT1I | CCWWGG | 1 cut(s) | 129 |
| Bst2BI | CACGAG | 1 cut(s) | 120 |
| Bst4CI | ACNGT | 1 cut(s) | 359 |
| Bst6I | CTCTTC | 2 cut(s) | 104, 215 |
| BstACI | GRCGYC | 1 cut(s) | 368 |
| BstDSI | CCRYGG | 1 cut(s) | 129 |
| BstKTI | GATC | 1 cut(s) | 141 |
| BstMAI | GTCTC | 2 cut(s) | 62, 111 |
| BstMBI | GATC | 1 cut(s) | 138 |
| BstMCI | CGRYCG | 1 cut(s) | 399 |
| BstV1I | GCAGC | 1 cut(s) | 388 |
| BstV2I | GAAGAC | 2 cut(s) | 86, 371 |
| BsuRI | GGCC | 1 cut(s) | 350 |
| BtgI | CCRYGG | 1 cut(s) | 129 |
| BtgZI | GCGATG | 1 cut(s) | 259 |
| BtsIMutI | CAGTG | 1 cut(s) | 355 |
| Cfr13I | GGNCC | 2 cut(s) | 147, 349 |
| Csp6I | GTAC | 3 cut(s) | 187, 307, 360 |
| CviAII | CATG | 2 cut(s) | 130, 136 |
| CviJI | RGCY | 3 cut(s) | 172, 236, 350 |
| CviKI_1 | RGCY | 3 cut(s) | 172, 236, 350 |
| CviQI | GTAC | 3 cut(s) | 187, 307, 360 |
| DpnI | GATC | 1 cut(s) | 140 |
| DpnII | GATC | 1 cut(s) | 138 |
| DraI | TTTAAA | 1 cut(s) | 66 |
| Eam1104I | CTCTTC | 2 cut(s) | 104, 215 |
| EarI | CTCTTC | 2 cut(s) | 104, 215 |
| Eco130I | CCWWGG | 1 cut(s) | 129 |
| Eco32I | GATATC | 1 cut(s) | 253 |
| Eco47I | GGWCC | 1 cut(s) | 147 |
| EcoRV | GATATC | 1 cut(s) | 253 |
| EcoT14I | CCWWGG | 1 cut(s) | 129 |
| ErhI | CCWWGG | 1 cut(s) | 129 |
| Esp3I | CGTCTC | 1 cut(s) | 111 |
| FaeI | CATG | 2 cut(s) | 133, 139 |
| FaiI | YATR | 5 cut(s) | 131, 137, 197, 239, 451 |
| FaqI | GGGAC | 1 cut(s) | 160 |
| FatI | CATG | 2 cut(s) | 129, 135 |
| FbaI | TGATCA | 1 cut(s) | 138 |
| Fnu4HI | GCNGC | 1 cut(s) | 402 |
| Fsp4HI | GCNGC | 1 cut(s) | 402 |
| FspBI | CTAG | 1 cut(s) | 426 |
| GluI | GCNGC | 1 cut(s) | 402 |
| GsuI | CTGGAG | 1 cut(s) | 191 |
| HaeIII | GGCC | 1 cut(s) | 350 |
| Hin1I | GRCGYC | 1 cut(s) | 368 |
| Hin1II | CATG | 2 cut(s) | 133, 139 |
| HinfI | GANTC | 3 cut(s) | 14, 91, 312 |
| HphI | GGTGA | 2 cut(s) | 9, 226 |
| Hpy166II | GTNNAC | 1 cut(s) | 265 |
| Hpy188I | TCNGA | 1 cut(s) | 111 |
| Hpy188III | TCNNGA | 2 cut(s) | 208, 316 |
| Hpy8I | GTNNAC | 1 cut(s) | 265 |
| Hpy99I | CGWCG | 1 cut(s) | 373 |
| HpyAV | CCTTC | 2 cut(s) | 152, 362 |
| HpyCH4III | ACNGT | 1 cut(s) | 359 |
| HpyCH4IV | ACGT | 3 cut(s) | 165, 261, 368 |
| HpySE526I | ACGT | 3 cut(s) | 165, 261, 368 |
| Hsp92I | GRCGYC | 1 cut(s) | 368 |
| Hsp92II | CATG | 2 cut(s) | 133, 139 |
| Ksp22I | TGATCA | 1 cut(s) | 138 |
| Kzo9I | GATC | 1 cut(s) | 138 |
| LpnPI | CCDG | 5 cut(s) | 60, 67, 221, 329, 389 |
| Lsp1109I | GCAGC | 1 cut(s) | 388 |
| LweI | GCATC | 1 cut(s) | 282 |
| MaeI | CTAG | 1 cut(s) | 426 |
| MaeII | ACGT | 3 cut(s) | 165, 261, 368 |
| MaeIII | GTNAC | 3 cut(s) | 15, 49, 161 |
| MalI | GATC | 1 cut(s) | 140 |
| MboI | GATC | 1 cut(s) | 138 |
| MboII | GAAGA | 7 cut(s) | 86, 91, 229, 232, 351, 376, 430 |
| MfeI | CAATTG | 1 cut(s) | 32 |
| MluCI | AATT | 2 cut(s) | 32, 296 |
| MlyI | GAGTC | 2 cut(s) | 23, 100 |
| MnlI | CCTC | 6 cut(s) | 35, 184, 215, 216, 396, 403 |
| MseI | TTAA | 4 cut(s) | 65, 335, 414, 437 |
| MslI | CAYNNNNRTG | 1 cut(s) | 134 |
| MunI | CAATTG | 1 cut(s) | 32 |
| NcoI | CCATGG | 1 cut(s) | 129 |
| NdeII | GATC | 1 cut(s) | 138 |
| NlaIII | CATG | 2 cut(s) | 133, 139 |
| NlaIV | GGNNCC | 1 cut(s) | 148 |
| NmuCI | GTSAC | 1 cut(s) | 15 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 110, 368 |
| PfeI | GAWTC | 1 cut(s) | 312 |
| PkrI | GCNGC | 1 cut(s) | 403 |
| PleI | GAGTC | 2 cut(s) | 22, 99 |
| PpsI | GAGTC | 2 cut(s) | 22, 99 |
| PspN4I | GGNNCC | 1 cut(s) | 148 |
| PspPI | GGNCC | 2 cut(s) | 147, 349 |
| RsaI | GTAC | 3 cut(s) | 188, 308, 361 |
| RsaNI | GTAC | 3 cut(s) | 187, 307, 360 |
| RseI | CAYNNNNRTG | 1 cut(s) | 134 |
| SaqAI | TTAA | 4 cut(s) | 65, 335, 414, 437 |
| SatI | GCNGC | 1 cut(s) | 402 |
| Sau3AI | GATC | 1 cut(s) | 138 |
| Sau96I | GGNCC | 2 cut(s) | 147, 349 |
| SchI | GAGTC | 2 cut(s) | 23, 100 |
| SfaNI | GCATC | 1 cut(s) | 282 |
| SinI | GGWCC | 1 cut(s) | 147 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 134 |
| Sse9I | AATT | 2 cut(s) | 32, 296 |
| SspI | AATATT | 2 cut(s) | 332, 411 |
| SspMI | CTAG | 1 cut(s) | 426 |
| StyI | CCWWGG | 1 cut(s) | 129 |
| TaaI | ACNGT | 1 cut(s) | 359 |
| TaiI | ACGT | 3 cut(s) | 168, 264, 371 |
| TaqI | TCGA | 1 cut(s) | 255 |
| TaqII | GACCGA | 3 cut(s) | 17, 164, 385 |
| TasI | AATT | 2 cut(s) | 32, 296 |
| TfiI | GAWTC | 1 cut(s) | 312 |
| Tru1I | TTAA | 4 cut(s) | 65, 335, 414, 437 |
| Tru9I | TTAA | 4 cut(s) | 65, 335, 414, 437 |
| TscAI | CASTG | 1 cut(s) | 362 |
| TseFI | GTSAC | 1 cut(s) | 15 |
| TseI | GCWGC | 1 cut(s) | 401 |
| Tsp45I | GTSAC | 1 cut(s) | 15 |
| TspDTI | ATGAA | 1 cut(s) | 53 |
| TspRI | CASTG | 1 cut(s) | 362 |
| VpaK11BI | GGWCC | 1 cut(s) | 147 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 244 |
| XspI | CTAG | 1 cut(s) | 426 |
| ZraI | GACGTC | 1 cut(s) | 369 |