Rorug05G0056000

Threonine synthase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
4926753 .. 4936343
9591 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0056000.1

Sequence Viewer

Length: 3738 bp
ATGAGTCAAGTCGACGAAGCTGACGACGAGCCCAGCTTGGCTCAGTCAATTGAAATTGAACAAAAACCCCAAACCCCCAACCCTGAACAACCACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGCCCCAAAACGACGACGATCCGATGGAGGAAGACGCCTCCTCCGTCAGCCCATCCGCCGTCTTCTGTATTGGGCTCAAGCAGCCCAGGTCCGATTTGCTCCACAAGATGAGCGTCCCTGAGCTTTGTCGCAATTTTAGTGCTGTTGCTTGGTGTGGGAAGCTGAATGCCATAGCTTGTGCCTCAGAAACTTGTGCAAGAATTCCAAGTTCTAATGCAAATCCACCTTTTTGGATTCCCATTCATATCGTAATCCCAGAGCGACCAACTGAGTGTGCAGTATTCAATGTTAATGCAGATTCTCCTCGTGATTCTGTTCAGTTTATTGAATGGTCACCCACTTCTTGCCCTCGTGCCTTACTGATTGCTAATTTTCATGGGAGAATAACGATCTGGACTCAACCTTCTCAAGGGCCAGCTAATTTAGTACGTGATGCTAGCAGCTGGTTACTAGAGCATGAATGGCAGCAGGATATTGCAGTTGTTACAAAGTGGCTATCAGGGGTGTCACCGTATAGGTGGCTTTCCTCAAAATCAAGTAGTCCTTCAAATGCGAAGTCAACTTTTGAAGAAAAATTTCTTTCACAAGAATCCCAGAATTCAGATAGGTGGCCAAATTTTCTCTGTGTCTGTTCTGTTTTCTCGTCAGGCTCTGTTCAGCTTCATTGGTCTCAATGGCCTCCTAATCAAAGTACTGCAGCACCAAAGTGGTTTCAAACGAGCAAGGGACTCTTGGGCGCTGGGCCTAGTGGAATCATGGCTGCTGATGCTATCATAACAGATAGTGGTGCTATGCATGTTGCAGGTGTTCCAATTGTAAACCCATCTACTGTTGTTGTTTGGGAGGTCACTCCTGGTCTTGGCAATGGATTTCACGTAACACCGAAGATAACCACAAGCAATGGGGTCCCACCTTCAATAAGTCCACCCAATTGGGCAGGTTTTTCCCCTTTAGCTGCATATTTGTTTAGCTGGCAAGATTATCTAATATCCGAATCAAAGCAAGGGCGAAAGCAGACAGATTCAGATTTCAGTGATACTGTACCACTCCATTGCTCCCCAGTTTCAAATTTTTCAGCATATGTGAGCCCTGAGGCTGCAGCTCAATCTGCAACAACCACCACGTGGGGATCTGGAGTTACTGCAGTTGCCTTTGATCCAACTCGGGGTGGTTCTGTCATTGCTGTTGTCATAGTTGAGGGACAATACATGTCGCCTTATGATCCAGATGAGGGTCCTTCAATTACAGGATGGAGAGTGCAACGCTGGGAATCATCCGTTCAGCCAGTTGTGCTTCATCAAATATTTGGGAATCCCACTTCCACTTTTGGTGGGCAGGCACCCATGCAAACAGTTTGGCTGTCCAAAGTGGACACATGTATACAACCAACTAATGATTTTAAAAGTCACCAAGCAGCTGCAACAGGAGTAATCTCTGAGCCAAAGAAGACACCTGATTCTAGCATTGAAAAGGCAAAAAGAGTCAATTTTGATCCTTTTGACCTGCCAAGTGATGTTAGAACTCTTGCTCGAATAGTCTATTCTGCTCATGGTGGTGAAATTGCTGTTGCTTTTCTTCGGGGCGGGGTTCACATATTCTCTGGTCCAAACTTCACACCTGTTGACAACTACCAGATTAACGTTGGATCTGCAATTGCTGCTCCTGCCTTCTCATCGACAAGCTGCTGCTCAGCTTCTGTTTGGCATGACAGTAGTAAGGACCGTACCATTTTAAAAATACTACGTGTTCTTCCACCCGCTGTTCCAAGCAGTCAAGTGAAGGCGAACTCATCAACGTGGGAACGTGCAATTGCAGAAAGATTTTGGTGGAGTCTTTTGGTTGGAGTTGATTGGTGGGATGCAGTTGGGTGTACACAGAGTGCTGCCGAAGATGGCATTGTTTCTCTGAACAGTGTCATTGCAGTATTGGATGCAGATTTTCATTCTCTTCCTTCTACTCAGCACAGACAACAGTACGGTCCTAGTCTAGATAGGATAAAATGCAGGCTGCTGGAAGGCACAAATGCACAAGAAGTTAGGGCAATGGTTCTAGACATGCAAGCTAGGCTGTTGCTAGACATGCTTGGGAAAGGAATTGAATCAGCTTTGATAAATCCATCTGCTTTGGTACAAGAGCCATGGCTGGCATCTGGTGAAACTTTATCCAGCATTGATCCTGAAGCAATGGCTGTTGAGCCAGCACTTGTGTCAAATAATCAGGCTTACGTTGATGCAGTTCTTGATCTAGCTTCACATTTCATCACTCGCTTGCGGCGCTATGCTAGTTTTTGCCGCACATTGGCCAGCCATGCTGTTACTGCTGGCACTGGTAGCAATCGCAATATGGTAGCTAGTCCTACCCAGAGTACGGGTTCTCCTGCAACTAATCAGGGAGGTCAAAATGGACCAACATCTTCCACAGGAAACACCCAGATGCAAGCTTGGGTACAAGGTGCCATTGCCAAGATCAGTAGTACCTCTGATGGAGTGCCCAATTCCACCCCAAACCCCATCAGTGGTCCATCTTCTTTCATGCCAATAAGTATAAACACAGGAACATTTCCAGGAACACCTGCTGTTAGGCTGATTGGGGATTGCCATTTTCTTCATAGATTATGCCAGCTTTTGCTTTTCTGTTTTTTCTTTCGGCGAACTCAGCTACCCCGTTTTACTGGGGCTGCACAGAGAAATACAGATGCAAACATGCAAAAGCCTCAGCCTGGGGCTCCTGGGAAAGTGGAGGAAATCAGTTCTGTATCTGTAAGACCATCCTCAACCATAGTTAGACCGGAGGAGAGTCAGGTAGCTCGGGCTGGTCAGATCATACCTGCAGCAAAAGGAGTTGAGGAAGGACCTGCTGGAAGGTCAAGATTAGGTGCTGGAAATGCTGGTCAGGGATACACTTTTGAGGAGGTGAAAGTCCTTTTTCTCATCCTTATGGATCTTTGCAAAAGAACAGCAAACCTGGTTCATCCATTGCCAGTTTCTCAGGTGGGAAGCGGCAACATTCAAGTGCGGCTGCATTACATTGATGGGAATTATACTGTACTCCCAGAAGTGGTGGAAGCATCCCTCGGCCCTCATATGCAGAATATGCCCCGGCCTAGAGGTGCTGATGCTGCTGGTCTGTTACTCCGAGAATTAGAACTCCACCCTCCAGCTGAAGAGTGGCACAGACGGAATATGTATGGTGGGCCTTGGTCTGATCCGGATGATGTGGGCCTTCTAGATGATACTCCCAAGCTATGTAATTCTCATGACCCAGTCGATTTGGGATTGATGGAAAGTTCTGATGTCTATTATGGAGCCCGTGGCCTGTGGCCGAGGAAGCGCAGAATGTCTGAAAGAGATGCAGCATTTGGCTTAAACACATCTGTGGGTCTAGGGGCATATCTTGGTATAATGGGATCACGGAGAGATGTTGTTACTGCTGTATGGAAGACTGGTCTTGATGGTGTTTGGTATAAGTGCATCAGATGTTTACGGCAGACTTCAGCTTTTGCTTCCCAAGGTGCTACTAGTCCACCTAATCAAACTGAGCGGGAGACTTGGTGGATCAGCCGCTGGGCTTATTGCTGTCCTATGTGTGGTGGAACATGGGTTCGAGTTGTATAA

Protein Analysis

1245

Amino Acids

135.12

Weight (kDa)

5.46

Isoelectric Point (pI)

49.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 917, 2704
Acc36I ACCTGC 6 cut(s) 917, 1052, 1635, 2704, 2959, 2986
AccB1I GGYRCC 2 cut(s) 1462, 2576
AccB7I CCANNNNNTGG 1 cut(s) 1248
AccBSI CCGCTC 1 cut(s) 3664
AccI GTMKAC 2 cut(s) 12, 1504
AccIII TCCGGA 1 cut(s) 3331
AciI CCGC 9 cut(s) 180, 1707, 1881, 2395, 2416, 3123, 3139, 3664, 3685
AclI AACGTT 1 cut(s) 1764
AcoI YGGCCR 3 cut(s) 734, 2424, 3443
AcsI RAATTY 5 cut(s) 324, 698, 721, 739, 1192
AcuI CTGAAG 3 cut(s) 2322, 3306, 3600
AcvI CACGTG 1 cut(s) 1248
AcyI GRCGYC 1 cut(s) 159
AdeI CACNNNGTG 2 cut(s) 1248, 2003
AflIII ACRYGT 3 cut(s) 1332, 1499, 1867
AhlI ACTAGT 1 cut(s) 3641
AjnI CCWGG 6 cut(s) 209, 976, 2686, 2842, 2851, 3087
AleI CACNNNNGTG 2 cut(s) 829, 3497
AloI GAACNNNNNNTCC 1 cut(s) 3708
Alw26I GTCTC 2 cut(s) 798, 3662
AlwNI CAGNNNCTG 3 cut(s) 776, 1820, 3687
Ama87I CYCGRG 2 cut(s) 1287, 2931
Aor13HI TCCGGA 1 cut(s) 3331
ApoI RAATTY 5 cut(s) 324, 698, 721, 739, 1192
ArsI GACNNNNNNTTYG 2 cut(s) 665, 697
Asp700I GAANNNNTTC 1 cut(s) 699
AspLEI GCGC 3 cut(s) 863, 2400, 3456
AsuC2I CCSGG 1 cut(s) 3223
AsuHPI GGTGA 6 cut(s) 450, 624, 1523, 1691, 2288, 3049
AsuNHI GCTAGC 1 cut(s) 560
AvaI CYCGRG 2 cut(s) 1287, 2931
AvaII GGWCC 9 cut(s) 213, 1030, 1358, 1727, 1843, 2102, 2528, 2642, 2975
AxyI CCTNAGG 1 cut(s) 1215
BaeGI GKGCMC 1 cut(s) 2616
BalI TGGCCA 2 cut(s) 736, 2426
BanI GGYRCC 2 cut(s) 1462, 2576
BanII GRGCYC 6 cut(s) 33, 129, 201, 1214, 2851, 3433
BauI CACGAG 2 cut(s) 429, 474
BbrPI CACGTG 1 cut(s) 1248
BbsI GAAGAC 4 cut(s) 162, 178, 1577, 3569
BbvCI CCTCAGC 1 cut(s) 2838
BceAI ACGGC 2 cut(s) 167, 3623
BciT130I CCWGG 6 cut(s) 211, 978, 2688, 2844, 2853, 3089
BciVI GTATCC 1 cut(s) 3014
BcnI CCSGG 1 cut(s) 3223
BcoDI GTCTC 2 cut(s) 798, 3662
BcuI ACTAGT 1 cut(s) 3641
BfmI CTRYAG 4 cut(s) 819, 1221, 1266, 2952
BfoI RGCGCY 2 cut(s) 864, 2401
BfuAI ACCTGC 6 cut(s) 917, 1052, 1635, 2704, 2959, 2986
BfuI GTATCC 1 cut(s) 3014
BlpI GCTNAGC 1 cut(s) 1813
BmcAI AGTACT 1 cut(s) 817
Bme1390I CCNGG 7 cut(s) 211, 978, 2688, 2844, 2853, 3089, 3223
Bme18I GGWCC 9 cut(s) 213, 1030, 1358, 1727, 1843, 2102, 2528, 2642, 2975
BmeT110I CYCGRG 2 cut(s) 1287, 2931
BmiI GGNNCC 7 cut(s) 1031, 1032, 1359, 1464, 2578, 2850, 3430
BmrFI CCNGG 7 cut(s) 211, 978, 2688, 2844, 2853, 3089, 3223
BmrI ACTGGG 3 cut(s) 1178, 2805, 3380
BmtI GCTAGC 1 cut(s) 564
BmuI ACTGGG 3 cut(s) 1178, 2805, 3380
BpiI GAAGAC 4 cut(s) 162, 178, 1577, 3569
BpmI CTGGAG 2 cut(s) 1278, 3264
Bpu10I CCTNAGC 2 cut(s) 243, 2838
Bpu1102I GCTNAGC 1 cut(s) 1813
BpuEI CTTGAG 2 cut(s) 185, 516
BpuMI CCSGG 1 cut(s) 3223
BsaAI YACGTR 4 cut(s) 554, 1000, 1248, 1868
BsaHI GRCGYC 1 cut(s) 159
BsaI GGTCTC 1 cut(s) 798
BsaWI WCCGGW 2 cut(s) 2911, 3331
BsaXI ACNNNNNCTCC 6 cut(s) 149, 179, 2482, 2512, 3659, 3689
Bse1I ACTGG 7 cut(s) 1184, 1409, 2455, 2800, 3104, 3386, 3571
Bse21I CCTNAGG 1 cut(s) 1215
Bse3DI GCAATG 9 cut(s) 994, 1030, 1174, 1302, 2040, 2172, 2313, 2580, 3098
BseAI TCCGGA 1 cut(s) 3331
BseBI CCWGG 6 cut(s) 211, 978, 2688, 2844, 2853, 3089
BseMI GCAATG 9 cut(s) 994, 1030, 1174, 1302, 2040, 2172, 2313, 2580, 3098
BseNI ACTGG 7 cut(s) 1184, 1409, 2455, 2800, 3104, 3386, 3571
BseRI GAGGAG 4 cut(s) 154, 417, 2930, 3047
BseSI GKGCMC 1 cut(s) 2616
BseYI CCCAGC 4 cut(s) 32, 863, 1389, 3687
BsgI GTGCAG 2 cut(s) 420, 2787
BshNI GGYRCC 2 cut(s) 1462, 2576
BsiHKCI CYCGRG 2 cut(s) 1287, 2931
BsiSI CCGG 3 cut(s) 2912, 3223, 3332
BslFI GGGAC 4 cut(s) 224, 864, 1016, 1338
BsmAI GTCTC 2 cut(s) 798, 3662
BsmFI GGGAC 4 cut(s) 224, 864, 1016, 1338
BsmI GAATGC 1 cut(s) 295
Bso31I GGTCTC 1 cut(s) 798
BsoBI CYCGRG 2 cut(s) 1287, 2931
Bsp1286I GDGCHC 7 cut(s) 33, 129, 201, 1214, 2616, 2851, 3433
Bsp13I TCCGGA 1 cut(s) 3331
Bsp1407I TGTACA 1 cut(s) 1994
Bsp1720I GCTNAGC 1 cut(s) 1813
Bsp19I CCATGG 1 cut(s) 2261
BspACI CCGC 9 cut(s) 180, 1707, 1881, 2395, 2416, 3123, 3139, 3664, 3685
BspEI TCCGGA 1 cut(s) 3331
BspHI TCATGA 1 cut(s) 3379
BspLI GGNNCC 7 cut(s) 1031, 1032, 1359, 1464, 2578, 2850, 3430
BspMAI CTGCAG 4 cut(s) 823, 1225, 1270, 2956
BspMI ACCTGC 6 cut(s) 917, 1052, 1635, 2704, 2959, 2986
BspOI GCTAGC 1 cut(s) 564
BspQI GCTCTTC 1 cut(s) 117
BspT107I GGYRCC 2 cut(s) 1462, 2576
BspTNI GGTCTC 1 cut(s) 798
BsrBI CCGCTC 1 cut(s) 3664
BsrDI GCAATG 9 cut(s) 994, 1030, 1174, 1302, 2040, 2172, 2313, 2580, 3098
BsrGI TGTACA 1 cut(s) 1994
BsrI ACTGG 7 cut(s) 1184, 1409, 2455, 2800, 3104, 3386, 3571
BssNAI GTATAC 1 cut(s) 1505
BssNI GRCGYC 1 cut(s) 159
BssSI CACGAG 2 cut(s) 429, 474
BssT1I CCWWGG 3 cut(s) 2261, 3320, 3631
Bst1107I GTATAC 1 cut(s) 1505
Bst2BI CACGAG 2 cut(s) 429, 474
Bst2UI CCWGG 6 cut(s) 211, 978, 2688, 2844, 2853, 3089
Bst6I CTCTTC 3 cut(s) 117, 2076, 3282
BstACI GRCGYC 1 cut(s) 159
BstAPI GCANNNNNTGC 2 cut(s) 1781, 3217
BstAUI TGTACA 1 cut(s) 1994
BstBAI YACGTR 4 cut(s) 554, 1000, 1248, 1868
BstDSI CCRYGG 2 cut(s) 2261, 3433
BstEII GGTNACC 1 cut(s) 456
BstENI CCTNNNNNAGG 1 cut(s) 531
BstH2I RGCGCY 2 cut(s) 864, 2401
BstHHI GCGC 3 cut(s) 863, 2400, 3456
BstMAI GTCTC 2 cut(s) 798, 3662
BstNI CCWGG 6 cut(s) 211, 978, 2688, 2844, 2853, 3089
BstNSI RCATGY 6 cut(s) 923, 1336, 1503, 2182, 2206, 2830
BstPI GGTNACC 1 cut(s) 456
BstSCI CCNGG 7 cut(s) 209, 976, 2686, 2842, 2851, 3087, 3221
BstSFI CTRYAG 4 cut(s) 819, 1221, 1266, 2952
BstSLI GKGCMC 1 cut(s) 2616
BstV2I GAAGAC 4 cut(s) 162, 178, 1577, 3569
BstX2I RGATCY 3 cut(s) 1253, 1769, 3064
BstXI CCANNNNNNTGG 2 cut(s) 354, 1056
BstYI RGATCY 3 cut(s) 1253, 1769, 3064
BstZ17I GTATAC 1 cut(s) 1505
Bsu36I CCTNAGG 1 cut(s) 1215
BsuI GTATCC 1 cut(s) 3014
BtgI CCRYGG 2 cut(s) 2261, 3433
BtsIMutI CAGTG 4 cut(s) 1162, 2041, 2448, 2644
BveI ACCTGC 6 cut(s) 917, 1052, 1635, 2704, 2959, 2986
CaiI CAGNNNCTG 3 cut(s) 776, 1820, 3687
CciI TCATGA 1 cut(s) 3379
CfoI GCGC 3 cut(s) 863, 2400, 3456
CseI GACGC 2 cut(s) 167, 226
CsiI ACCWGGT 1 cut(s) 3087
DraI TTTAAA 2 cut(s) 1525, 1857
DraIII CACNNNGTG 2 cut(s) 1248, 2003
EaeI YGGCCR 3 cut(s) 734, 2424, 3443
Eam1104I CTCTTC 3 cut(s) 117, 2076, 3282
EarI CTCTTC 3 cut(s) 117, 2076, 3282
EciI GGCGGA 1 cut(s) 169
Eco130I CCWWGG 3 cut(s) 2261, 3320, 3631
Eco24I GRGCYC 6 cut(s) 33, 129, 201, 1214, 2851, 3433
Eco31I GGTCTC 1 cut(s) 798
Eco47I GGWCC 9 cut(s) 213, 1030, 1358, 1727, 1843, 2102, 2528, 2642, 2975
Eco57I CTGAAG 3 cut(s) 2322, 3306, 3600
Eco72I CACGTG 1 cut(s) 1248
Eco81I CCTNAGG 1 cut(s) 1215
Eco88I CYCGRG 2 cut(s) 1287, 2931
Eco91I GGTNACC 1 cut(s) 456
EcoNI CCTNNNNNAGG 1 cut(s) 531
EcoO109I RGGNCCY 3 cut(s) 1030, 1358, 2975
EcoO65I GGTNACC 1 cut(s) 456
EcoRI GAATTC 2 cut(s) 324, 721
EcoRII CCWGG 6 cut(s) 209, 976, 2686, 2842, 2851, 3087
EcoT14I CCWWGG 3 cut(s) 2261, 3320, 3631
EcoT22I ATGCAT 1 cut(s) 921
EcoT38I GRGCYC 6 cut(s) 33, 129, 201, 1214, 2851, 3433
ErhI CCWWGG 3 cut(s) 2261, 3320, 3631
FalI AAGNNNNNCTT 4 cut(s) 652, 684, 839, 871
FaqI GGGAC 4 cut(s) 224, 864, 1016, 1338
FauI CCCGC 3 cut(s) 1700, 1888, 3657
FauNDI CATATG 2 cut(s) 1204, 3207
FblI GTMKAC 2 cut(s) 12, 1504
FriOI GRGCYC 6 cut(s) 33, 129, 201, 1214, 2851, 3433
GlaI GCGC 3 cut(s) 862, 2399, 3455
GsaI CCCAGC 4 cut(s) 36, 867, 1393, 3691
GsuI CTGGAG 2 cut(s) 1278, 3264
HaeII RGCGCY 2 cut(s) 864, 2401
HapII CCGG 3 cut(s) 2912, 3223, 3332
HgaI GACGC 2 cut(s) 167, 226
HhaI GCGC 3 cut(s) 863, 2400, 3456
Hin1I GRCGYC 1 cut(s) 159
Hin6I GCGC 3 cut(s) 861, 2398, 3454
HinP1I GCGC 3 cut(s) 861, 2398, 3454
HincII GTYRAC 3 cut(s) 13, 684, 1747
HindII GTYRAC 3 cut(s) 13, 684, 1747
HindIII AAGCTT 1 cut(s) 2562
HpaII CCGG 3 cut(s) 2912, 3223, 3332
HphI GGTGA 6 cut(s) 450, 624, 1523, 1691, 2288, 3049
Hpy99I CGWCG 4 cut(s) 17, 29, 140, 143
HpyCH4IV ACGT 8 cut(s) 553, 999, 1247, 1764, 1867, 1919, 1927, 2349
HpySE526I ACGT 8 cut(s) 553, 999, 1247, 1764, 1867, 1919, 1927, 2349
Hsp92I GRCGYC 1 cut(s) 159
HspAI GCGC 3 cut(s) 861, 2398, 3454
KflI GGGWCCC 1 cut(s) 1030
Kpn2I TCCGGA 1 cut(s) 3331
LguI GCTCTTC 1 cut(s) 117
LmnI GCTCC 5 cut(s) 228, 1184, 1789, 2854, 3428
MabI ACCWGGT 1 cut(s) 3087
MaeII ACGT 8 cut(s) 553, 999, 1247, 1764, 1867, 1919, 1927, 2349
MbiI CCGCTC 1 cut(s) 3664
MfeI CAATTG 5 cut(s) 48, 936, 1054, 1776, 1932
MflI RGATCY 3 cut(s) 1253, 1769, 3064
MhlI GDGCHC 7 cut(s) 33, 129, 201, 1214, 2616, 2851, 3433
MlsI TGGCCA 2 cut(s) 736, 2426
MluNI TGGCCA 2 cut(s) 736, 2426
MlyI GAGTC 6 cut(s) 13, 514, 846, 1614, 1963, 2929
MmeI TCCRAC 3 cut(s) 1307, 1747, 1945
Mox20I TGGCCA 2 cut(s) 736, 2426
Mph1103I ATGCAT 1 cut(s) 921
MroI TCCGGA 1 cut(s) 3331
MroXI GAANNNNTTC 1 cut(s) 699
MscI TGGCCA 2 cut(s) 736, 2426
MseI TTAA 5 cut(s) 414, 1524, 1761, 1856, 3488
MslI CAYNNNNRTG 7 cut(s) 829, 1677, 1918, 2555, 3059, 3134, 3497
Msp20I TGGCCA 2 cut(s) 736, 2426
MspA1I CMGCKG 5 cut(s) 567, 1541, 1883, 3284, 3687
MspI CCGG 3 cut(s) 2912, 3223, 3332
MspR9I CCNGG 7 cut(s) 211, 978, 2688, 2844, 2853, 3089, 3223
MunI CAATTG 5 cut(s) 48, 936, 1054, 1776, 1932
Mva1269I GAATGC 1 cut(s) 295
MvaI CCWGG 6 cut(s) 211, 978, 2688, 2844, 2853, 3089
NciI CCSGG 1 cut(s) 3223
NcoI CCATGG 1 cut(s) 2261
NdeI CATATG 2 cut(s) 1204, 3207
NheI GCTAGC 1 cut(s) 560
NlaIV GGNNCC 7 cut(s) 1031, 1032, 1359, 1464, 2578, 2850, 3430
NmeAIII GCCGAG 2 cut(s) 3177, 3471
NmuCI GTSAC 4 cut(s) 456, 630, 970, 1529
NsiI ATGCAT 1 cut(s) 921
NspI RCATGY 6 cut(s) 923, 1336, 1503, 2182, 2206, 2830
OliI CACNNNNGTG 2 cut(s) 829, 3497
PagI TCATGA 1 cut(s) 3379
PaqCI CACCTGC 2 cut(s) 917, 2704
PciI ACATGT 2 cut(s) 1332, 1499
PciSI GCTCTTC 1 cut(s) 117
PcsI WCGNNNNNNNCGW 2 cut(s) 21, 165
PctI GAATGC 1 cut(s) 295
PdmI GAANNNNTTC 1 cut(s) 699
PflFI GACNNNGTC 1 cut(s) 3386
PflMI CCANNNNNTGG 1 cut(s) 1248
PfoI TCCNGGA 1 cut(s) 2686
PleI GAGTC 6 cut(s) 12, 514, 846, 1613, 1962, 2928
PmaCI CACGTG 1 cut(s) 1248
PmlI CACGTG 1 cut(s) 1248
PpsI GAGTC 6 cut(s) 12, 514, 846, 1613, 1962, 2928
Ppu21I YACGTR 4 cut(s) 554, 1000, 1248, 1868
PpuMI RGGWCCY 3 cut(s) 1030, 1358, 2975
PscI ACATGT 2 cut(s) 1332, 1499
Psp1406I AACGTT 1 cut(s) 1764
Psp5II RGGWCCY 3 cut(s) 1030, 1358, 2975
Psp6I CCWGG 6 cut(s) 209, 976, 2686, 2842, 2851, 3087
PspCI CACGTG 1 cut(s) 1248
PspEI GGTNACC 1 cut(s) 456
PspFI CCCAGC 4 cut(s) 32, 863, 1389, 3687
PspGI CCWGG 6 cut(s) 209, 976, 2686, 2842, 2851, 3087
PspN4I GGNNCC 7 cut(s) 1031, 1032, 1359, 1464, 2578, 2850, 3430
PspPPI RGGWCCY 3 cut(s) 1030, 1358, 2975
PstI CTGCAG 4 cut(s) 823, 1225, 1270, 2956
PstNI CAGNNNCTG 3 cut(s) 776, 1820, 3687
PsuI RGATCY 3 cut(s) 1253, 1769, 3064
PsyI GACNNNGTC 1 cut(s) 3386
PvuII CAGCTG 3 cut(s) 567, 1541, 3284
RseI CAYNNNNRTG 7 cut(s) 829, 1677, 1918, 2555, 3059, 3134, 3497
SalI GTCGAC 1 cut(s) 11
SapI GCTCTTC 1 cut(s) 117
SaqAI TTAA 5 cut(s) 414, 1524, 1761, 1856, 3488
ScaI AGTACT 1 cut(s) 817
SchI GAGTC 6 cut(s) 13, 514, 846, 1614, 1963, 2929
ScrFI CCNGG 7 cut(s) 211, 978, 2688, 2844, 2853, 3089, 3223
SduI GDGCHC 7 cut(s) 33, 129, 201, 1214, 2616, 2851, 3433
SexAI ACCWGGT 1 cut(s) 3087
SfcI CTRYAG 4 cut(s) 819, 1221, 1266, 2952
SinI GGWCC 9 cut(s) 213, 1030, 1358, 1727, 1843, 2102, 2528, 2642, 2975
SmiMI CAYNNNNRTG 7 cut(s) 829, 1677, 1918, 2555, 3059, 3134, 3497
SmlI CTYRAG 2 cut(s) 200, 531
SmoI CTYRAG 2 cut(s) 200, 531
SpeI ACTAGT 1 cut(s) 3641
SsiI CCGC 9 cut(s) 180, 1707, 1881, 2395, 2416, 3123, 3139, 3664, 3685
SspI AATATT 1 cut(s) 1428
StyD4I CCNGG 7 cut(s) 209, 976, 2686, 2842, 2851, 3087, 3221
StyI CCWWGG 3 cut(s) 2261, 3320, 3631
TaiI ACGT 8 cut(s) 556, 1002, 1250, 1767, 1870, 1922, 1930, 2352
TaqI TCGA 5 cut(s) 12, 1654, 1799, 3390, 3727
TatI WGTACW 3 cut(s) 815, 1994, 3169
TauI GCSGC 5 cut(s) 2398, 2418, 3126, 3142, 3687
Tru1I TTAA 5 cut(s) 414, 1524, 1761, 1856, 3488
Tru9I TTAA 5 cut(s) 414, 1524, 1761, 1856, 3488
TscAI CASTG 4 cut(s) 1162, 2041, 2455, 2644
TseFI GTSAC 4 cut(s) 456, 630, 970, 1529
Tsp45I GTSAC 4 cut(s) 456, 630, 970, 1529
TspGWI ACGGA 4 cut(s) 157, 1390, 3316, 3550
TspRI CASTG 4 cut(s) 1162, 2041, 2455, 2644
Tth111I GACNNNGTC 1 cut(s) 3386
Van91I CCANNNNNTGG 1 cut(s) 1248
VpaK11BI GGWCC 9 cut(s) 213, 1030, 1358, 1727, 1843, 2102, 2528, 2642, 2975
XagI CCTNNNNNAGG 1 cut(s) 531
XapI RAATTY 5 cut(s) 324, 698, 721, 739, 1192
XbaI TCTAGA 3 cut(s) 2110, 2173, 3349
XceI RCATGY 6 cut(s) 923, 1336, 1503, 2182, 2206, 2830
XcmI CCANNNNNNNNNTGG 2 cut(s) 1763, 3288
XmiI GTMKAC 2 cut(s) 12, 1504
XmnI GAANNNNTTC 1 cut(s) 699
ZrmI AGTACT 1 cut(s) 817
Zsp2I ATGCAT 1 cut(s) 921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.