Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0005631

Physical Location & Seq

Genomic Coordinates Reverse (-)

66492862 .. 66494406

Gene Structure 1545 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG460600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGGCGTCTTCCTCTCTCTTCCAATCCCCCTCCTTCTCTCTCAAACCCCAGAAACCCATTTCCCCACCCTCCACCAGACCCCATTTCACCACCACCATCAAATGCTCCTCCTCCTCCTCTGCCGCCAAATGCCGCGACAACATCCGCGACGACGCCCACCGCCACAACACCACCCACACCCACCACTTCTCCGCCAAGTACGTCCCCTTCAACTCCCCCGCAGACGACACGTCGTCCGAGTCCTACTCCCTCGACGAGGTCGTCTACCGCTCCCAGTCCGGCGGCCTCCTCGACGTCCAGCACGACATGACCGCCCTCAAGAACTACGACGGCAAGTACTGGCGCGACCTCTTCGACTCCCGCGTCGGCAAAACCACCTGGCCCTACGGCTCCGGCGTCTGGTCCAAAAAGGAGTGGGTCCTCCCTGAGATCGACAGCGACGACATCGTCTCCGCCTTCGAGGGCAACTCCAACCTCTTCTGGGCGGAGCGCTACGGCAAAACAGTCCTCGGCATGAACGAGCTCTGGGTCAAGCACTGCGGCATCAGCCACACCGGCTCCTTCAAGGACCTAGGCATGACCGTCCTCGTCAGCCAGGTCAATCGCCTCCGCAAAATGAACCGCCCCGTCGTCGGCGTCGGATGCGCCTCCACCGGCGACACCTCCGCCGCCCTGTCCGCCTACTGCGCCTCCGCCGGGATCCCCTCCATTGTGTTTCTGCCGGCGAATAAGATCTCCATGGCCCAGCTGGTCCAGCCCATCGCAAACGGGGCCTTTGTGCTGAGCATCGACACCGATTTCGATGGCTGTATGAATCTGATTCGAGAAGTGACTGCAGAATTGCCGATTTATTTAGCTAATTCTCTGAACAGTTTGAGACTGGAGGGCCAGAAAACAGCTGCTATTGAGATTCTGCAGCAGTTTGATTGGCAGGTCCCGGATTGGGTTATAGTTCCGGGAGGCAATCTCGGAAATATATATGCATTCTACAAAGGGTTTCATATGTGTAAGGAGTTAGGCCTGGTTGATAAGATTCCTAGACTTGTGTGTGCTCAAGCTGCAAATGCAAACCCTTTGTACTTGCATTACAAGTCGGGGTGGGATGAGGAGTTCAAGCCTGTGAAGGCAAACACTACGTTTGCATCTGCAATTCAGATTGGGGATCCTGTTTCCATTGACAGGGCCGTGTATGCGCTGAAGAAGTCGGATGGGATTGTGGAGGAGGCGACCGAGGAGGAGTTGATGGATGCAATGGCGCAAGCGGATTCCACCGGCATGTTTATATGTCCTCACACTGGTGTGGCGCTGGCGGCGTTGATCAAGCTCCGGAATAAGGGGGTTATAGGCCCGACGGAGAGGACTGTGGTGGTGAGCACGGCTCATGGGTTGAAGTTCACGCAGGCGAAGATTGATTATCACTCCAAGGAGATTCCGGATTTGGCTTGCCGGTTTGCTAACCCACCGGTTCAAGTGAGGGCAGATTTTGGGTCGGTTATGGATGTTTTGAAGAAGTACTTGAGTAAGTCGGGGGCTCCAAAGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004795 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008144 GO:0016829 GO:0016835 GO:0016838 GO:0019842 GO:0030170 GO:0036094 GO:0043167 GO:0043168 GO:0044424 GO:0044464 GO:0048037 GO:0050662 GO:0070279 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00260 ko00750 ko01100 ko01110 ko01120 ko01230 map00260 map00750 map01100 map01110 map01120 map01230

Pfam Domains

Protein Families

PALP

Protein Analysis

514

Amino Acids

56.37

Weight (kDa)

6.94

Isoelectric Point (pI)

34.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PALP	PF00291	151 - 459	2.8e-52	Pyridoxal-phosphate dependent enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005631)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72810
fragaria_vesca	FvH4_6g34290
malus_domestica	MD02G1014500.v1.1 MD09G1187000.v1.1 MD17G1171300.v1.1
prunus_persica	Prupe.3G044400_v2.0.a1 Prupe.6G348900_v2.0.a1
pyrus_communis	pycom02g01320 pycom02g01380 pycom09g10360
rosa_chinensis	RchiOBHm_Chr2g0144621
rosa_laevigata	RLG00000020095
rosa_multiflora	Rmu_co8042306.1_g000001 Rmu_sc0009300.1_g000001
rosa_rugosa	Rorug02G0388200 Rorug05G0056000
rosa_samantha	Rh2AG440200 Rh2BG450100 Rh2BG450600 Rh2CG427300 Rh2DG460000 Rh2DG460600 Rh4BG120100 Rh5BG145500 Rh5BG145600 Rh6AG467600 Rh7CG089000
rosa_wichuraiana	Rw2G036010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	260, 362, 446
AatII	GACGTC	1 cut(s)	297
Acc36I	ACCTGC	1 cut(s)	922
AccBSI	CCGCTC	1 cut(s)	270
AccI	GTMKAC	1 cut(s)	264
AccII	CGCG	4 cut(s)	135, 147, 345, 363
AccIII	TCCGGA	2 cut(s)	1326, 1432
AclWI	GGATC	4 cut(s)	694, 707, 1157, 1170
AcuI	CTGAAG	1 cut(s)	1217
AcyI	GRCGYC	5 cut(s)	5, 153, 294, 396, 636
AfaI	GTAC	4 cut(s)	200, 338, 1079, 1514
AfeI	AGCGCT	1 cut(s)	491
AfiI	CCNNNNNNNGG	9 cut(s)	256, 399, 481, 632, 696, 943, 1179, 1295, 1333
AflIII	ACRYGT	1 cut(s)	228
AgeI	ACCGGT	1 cut(s)	1462
AgsI	TTSAA	6 cut(s)	211, 565, 1114, 1390, 1469, 1507
AhdI	GACNNNNNGTC	2 cut(s)	229, 232
AjiI	CACGTC	1 cut(s)	231
AjnI	CCWGG	3 cut(s)	377, 594, 1020
AleI	CACNNNNGTG	2 cut(s)	1296, 1298
AloI	GAACNNNNNNTCC	2 cut(s)	1094, 1126
AluBI	AGCT	6 cut(s)	523, 748, 857, 899, 1058, 1324
AluI	AGCT	6 cut(s)	523, 748, 857, 899, 1058, 1324
Alw21I	GWGCWC	3 cut(s)	525, 1054, 1376
Alw26I	GTCTC	2 cut(s)	454, 871
AlwI	GGATC	4 cut(s)	694, 707, 1157, 1170
Aor13HI	TCCGGA	2 cut(s)	1326, 1432
Aor51HI	AGCGCT	1 cut(s)	491
AoxI	GGCC	8 cut(s)	283, 380, 741, 771, 886, 1018, 1182, 1345
ApeKI	GCWGC	3 cut(s)	899, 916, 1058
ArsI	GACNNNNNNTTYG	2 cut(s)	782, 814
AsiGI	ACCGGT	1 cut(s)	1462
AspA2I	CCTAGG	1 cut(s)	571
AspLEI	GCGC	7 cut(s)	345, 492, 647, 689, 1195, 1258, 1306
AsuC2I	CCSGG	3 cut(s)	697, 938, 957
AsuHPI	GGTGA	2 cut(s)	79, 1381
AvaII	GGWCC	5 cut(s)	402, 418, 568, 751, 934
AvrII	CCTAGG	1 cut(s)	571
BamHI	GGATCC	2 cut(s)	699, 1162
BanII	GRGCYC	2 cut(s)	525, 1534
BarI	GAAGNNNNNNTAC	2 cut(s)	191, 223
Bbv12I	GWGCWC	3 cut(s)	525, 1054, 1376
BbvI	GCAGC	3 cut(s)	886, 928, 1045
BccI	CCATC	5 cut(s)	104, 767, 797, 1202, 1237
BceAI	ACGGC	5 cut(s)	346, 403, 511, 1169, 1392
BciT130I	CCWGG	3 cut(s)	379, 596, 1022
BclI	TGATCA	1 cut(s)	1317
BcnI	CCSGG	3 cut(s)	697, 938, 957
BcoDI	GTCTC	2 cut(s)	454, 871
BfaI	CTAG	2 cut(s)	572, 1038
BfmI	CTRYAG	2 cut(s)	834, 914
BfoI	RGCGCY	2 cut(s)	493, 1307
BfuAI	ACCTGC	1 cut(s)	922
BglI	GCCNNNNNGGC	1 cut(s)	555
BglII	AGATCT	1 cut(s)	732
BisI	GCNGC	9 cut(s)	123, 133, 283, 541, 669, 900, 917, 1059, 1311
BlnI	CCTAGG	1 cut(s)	571
BlpI	GCTNAGC	1 cut(s)	782
BlsI	GCNGC	9 cut(s)	124, 134, 284, 542, 670, 901, 918, 1060, 1312
BmcAI	AGTACT	2 cut(s)	338, 1514
Bme1390I	CCNGG	6 cut(s)	379, 596, 697, 938, 957, 1022
Bme18I	GGWCC	5 cut(s)	402, 418, 568, 751, 934
BmeRI	GACNNNNNGTC	2 cut(s)	229, 232
BmgBI	CACGTC	1 cut(s)	231
BmiI	GGNNCC	8 cut(s)	391, 419, 559, 701, 772, 936, 1164, 1533
BmrFI	CCNGG	6 cut(s)	379, 596, 697, 938, 957, 1022
BmrI	ACTGGG	1 cut(s)	268
BmsI	GCATC	5 cut(s)	552, 632, 795, 1151, 1237
BmuI	ACTGGG	1 cut(s)	268
BplI	GAGNNNNNCTC	8 cut(s)	230, 262, 452, 484, 951, 983, 1363, 1395
BpmI	CTGGAG	1 cut(s)	902
Bpu1102I	GCTNAGC	1 cut(s)	782
BpuEI	CTTGAG	3 cut(s)	302, 1038, 1537
BpuMI	CCSGG	3 cut(s)	697, 938, 957
BsaHI	GRCGYC	5 cut(s)	5, 153, 294, 396, 636
BsaJI	CCNNGG	5 cut(s)	508, 571, 738, 1230, 1422
BsaWI	WCCGGW	3 cut(s)	1326, 1432, 1462
BsaXI	ACNNNNNCTCC	8 cut(s)	173, 203, 434, 464, 542, 572, 674, 704
Bsc4I	CCNNNNNNNGG	9 cut(s)	256, 399, 481, 632, 696, 943, 1179, 1295, 1333
Bse118I	RCCGGY	6 cut(s)	554, 653, 721, 1271, 1446, 1462
Bse1I	ACTGG	4 cut(s)	274, 344, 885, 1300
Bse3DI	GCAATG	1 cut(s)	1257
BseAI	TCCGGA	2 cut(s)	1326, 1432
BseBI	CCWGG	3 cut(s)	379, 596, 1022
BseDI	CCNNGG	5 cut(s)	508, 571, 738, 1230, 1422
BseGI	GGATG	6 cut(s)	141, 647, 1108, 1213, 1252, 1504
BseLI	CCNNNNNNNGG	9 cut(s)	256, 399, 481, 632, 696, 943, 1179, 1295, 1333
BseMI	GCAATG	1 cut(s)	1257
BseMII	CTCAG	2 cut(s)	417, 773
BseNI	ACTGG	4 cut(s)	274, 344, 885, 1300
BseRI	GAGGAG	9 cut(s)	97, 100, 103, 106, 278, 1121, 1235, 1247, 1250
BseXI	GCAGC	3 cut(s)	886, 928, 1045
BseYI	CCCAGC	1 cut(s)	744
Bsh1236I	CGCG	4 cut(s)	135, 147, 345, 363
Bsh1285I	CGRYCG	1 cut(s)	1230
BshFI	GGCC	8 cut(s)	285, 382, 743, 773, 888, 1020, 1184, 1347
BshTI	ACCGGT	1 cut(s)	1462
BsiEI	CGRYCG	1 cut(s)	1230
BsiHKAI	GWGCWC	3 cut(s)	525, 1054, 1376
BslFI	GGGAC	2 cut(s)	188, 920
BslI	CCNNNNNNNGG	9 cut(s)	256, 399, 481, 632, 696, 943, 1179, 1295, 1333
BsmAI	GTCTC	2 cut(s)	454, 871
BsmBI	CGTCTC	1 cut(s)	454
BsmFI	GGGAC	2 cut(s)	188, 920
BsmI	GAATGC	1 cut(s)	983
BsnI	GGCC	8 cut(s)	285, 382, 743, 773, 888, 1020, 1184, 1347
Bsp1286I	GDGCHC	4 cut(s)	525, 1054, 1376, 1534
Bsp13I	TCCGGA	2 cut(s)	1326, 1432
Bsp143I	GATC	5 cut(s)	429, 699, 732, 1162, 1317
Bsp1720I	GCTNAGC	1 cut(s)	782
Bsp19I	CCATGG	1 cut(s)	738
BspANI	GGCC	8 cut(s)	285, 382, 743, 773, 888, 1020, 1184, 1347
BspCNI	CTCAG	2 cut(s)	418, 774
BspEI	TCCGGA	2 cut(s)	1326, 1432
BspFNI	CGCG	4 cut(s)	135, 147, 345, 363
BspLI	GGNNCC	8 cut(s)	391, 419, 559, 701, 772, 936, 1164, 1533
BspMAI	CTGCAG	2 cut(s)	838, 918
BspMI	ACCTGC	1 cut(s)	922
BspPI	GGATC	4 cut(s)	694, 707, 1157, 1170
BsrBI	CCGCTC	1 cut(s)	270
BsrDI	GCAATG	1 cut(s)	1257
BsrFI	RCCGGY	6 cut(s)	554, 653, 721, 1271, 1446, 1462
BsrI	ACTGG	4 cut(s)	274, 344, 885, 1300
BssAI	RCCGGY	6 cut(s)	554, 653, 721, 1271, 1446, 1462
BssECI	CCNNGG	5 cut(s)	508, 571, 738, 1230, 1422
BssMI	GATC	5 cut(s)	429, 699, 732, 1162, 1317
BssNI	GRCGYC	5 cut(s)	5, 153, 294, 396, 636
BssT1I	CCWWGG	3 cut(s)	571, 738, 1422
Bst2UI	CCWGG	3 cut(s)	379, 596, 1022
Bst4CI	ACNGT	4 cut(s)	505, 583, 872, 1363
Bst6I	CTCTTC	3 cut(s)	23, 356, 482
BstACI	GRCGYC	5 cut(s)	5, 153, 294, 396, 636
BstC8I	GCNNGC	5 cut(s)	723, 1260, 1308, 1401, 1444
BstDEI	CTNAG	2 cut(s)	426, 782
BstDSI	CCRYGG	1 cut(s)	738
BstENI	CCTNNNNNAGG	1 cut(s)	254
BstF5I	GGATG	6 cut(s)	141, 647, 1108, 1213, 1252, 1504
BstFNI	CGCG	4 cut(s)	135, 147, 345, 363
BstH2I	RGCGCY	2 cut(s)	493, 1307
BstHHI	GCGC	7 cut(s)	345, 492, 647, 689, 1195, 1258, 1306
BstKTI	GATC	5 cut(s)	432, 702, 735, 1165, 1320
BstMAI	GTCTC	2 cut(s)	454, 871
BstMBI	GATC	5 cut(s)	429, 699, 732, 1162, 1317
BstMCI	CGRYCG	1 cut(s)	1230
BstNI	CCWGG	3 cut(s)	379, 596, 1022
BstNSI	RCATGY	1 cut(s)	1279
BstSCI	CCNGG	6 cut(s)	377, 594, 695, 936, 955, 1020
BstSFI	CTRYAG	2 cut(s)	834, 914
BstUI	CGCG	4 cut(s)	135, 147, 345, 363
BstV1I	GCAGC	3 cut(s)	886, 928, 1045
BstX2I	RGATCY	3 cut(s)	699, 732, 1162
BstYI	RGATCY	3 cut(s)	699, 732, 1162
BsuRI	GGCC	8 cut(s)	285, 382, 743, 773, 888, 1020, 1184, 1347
BtgI	CCRYGG	1 cut(s)	738
BtgZI	GCGATG	1 cut(s)	745
BtrI	CACGTC	1 cut(s)	231
BtsCI	GGATG	6 cut(s)	141, 647, 1108, 1213, 1252, 1504
BtsI	GCAGTG	1 cut(s)	535
BtsIMutI	CAGTG	2 cut(s)	535, 1293
BveI	ACCTGC	1 cut(s)	922
Cac8I	GCNNGC	5 cut(s)	723, 1260, 1308, 1401, 1444
CfoI	GCGC	7 cut(s)	345, 492, 647, 689, 1195, 1258, 1306
Cfr10I	RCCGGY	6 cut(s)	554, 653, 721, 1271, 1446, 1462
CseI	GACGC	4 cut(s)	161, 352, 385, 625
Csp6I	GTAC	4 cut(s)	199, 337, 1078, 1513
CspAI	ACCGGT	1 cut(s)	1462
CviAII	CATG	6 cut(s)	307, 514, 577, 739, 1276, 1382
CviQI	GTAC	4 cut(s)	199, 337, 1078, 1513
DdeI	CTNAG	2 cut(s)	426, 782
DpnI	GATC	5 cut(s)	431, 701, 734, 1164, 1319
DpnII	GATC	5 cut(s)	429, 699, 732, 1162, 1317
DrdI	GACNNNNNNGTC	3 cut(s)	260, 362, 446
DriI	GACNNNNNGTC	2 cut(s)	229, 232
DseDI	GACNNNNNNGTC	3 cut(s)	260, 362, 446
Eam1104I	CTCTTC	3 cut(s)	23, 356, 482
Eam1105I	GACNNNNNGTC	2 cut(s)	229, 232
EarI	CTCTTC	3 cut(s)	23, 356, 482
EciI	GGCGGA	6 cut(s)	181, 442, 500, 655, 667, 682
Ecl136II	GAGCTC	1 cut(s)	523
Eco130I	CCWWGG	3 cut(s)	571, 738, 1422
Eco147I	AGGCCT	1 cut(s)	1020
Eco24I	GRGCYC	2 cut(s)	525, 1534
Eco47I	GGWCC	5 cut(s)	402, 418, 568, 751, 934
Eco47III	AGCGCT	1 cut(s)	491
Eco53kI	GAGCTC	1 cut(s)	523
Eco57I	CTGAAG	1 cut(s)	1217
EcoICRI	GAGCTC	1 cut(s)	523
EcoNI	CCTNNNNNAGG	1 cut(s)	254
EcoO109I	RGGNCCY	4 cut(s)	418, 568, 771, 934
EcoRII	CCWGG	3 cut(s)	377, 594, 1020
EcoT14I	CCWWGG	3 cut(s)	571, 738, 1422
EcoT22I	ATGCAT	1 cut(s)	985
EcoT38I	GRGCYC	2 cut(s)	525, 1534
ErhI	CCWWGG	3 cut(s)	571, 738, 1422
Esp3I	CGTCTC	1 cut(s)	454
FaeI	CATG	6 cut(s)	310, 517, 580, 742, 1279, 1385
FalI	AAGNNNNNCTT	2 cut(s)	1499, 1531
FaqI	GGGAC	2 cut(s)	188, 920
FatI	CATG	6 cut(s)	306, 513, 576, 738, 1275, 1381
FauI	CCCGC	2 cut(s)	226, 368
FauNDI	CATATG	1 cut(s)	1002
FbaI	TGATCA	1 cut(s)	1317
FblI	GTMKAC	1 cut(s)	264
Fnu4HI	GCNGC	9 cut(s)	123, 133, 283, 541, 669, 900, 917, 1059, 1311
FokI	GGATG	6 cut(s)	128, 654, 1115, 1220, 1259, 1511
FriOI	GRGCYC	2 cut(s)	525, 1534
Fsp4HI	GCNGC	9 cut(s)	123, 133, 283, 541, 669, 900, 917, 1059, 1311
FspBI	CTAG	2 cut(s)	572, 1038
GlaI	GCGC	7 cut(s)	344, 491, 646, 688, 1194, 1257, 1305
GluI	GCNGC	9 cut(s)	123, 133, 283, 541, 669, 900, 917, 1059, 1311
GsaI	CCCAGC	1 cut(s)	748
GsuI	CTGGAG	1 cut(s)	902
HaeII	RGCGCY	2 cut(s)	493, 1307
HaeIII	GGCC	8 cut(s)	285, 382, 743, 773, 888, 1020, 1184, 1347
HgaI	GACGC	4 cut(s)	161, 352, 385, 625
HhaI	GCGC	7 cut(s)	345, 492, 647, 689, 1195, 1258, 1306
Hin1I	GRCGYC	5 cut(s)	5, 153, 294, 396, 636
Hin1II	CATG	6 cut(s)	310, 517, 580, 742, 1279, 1385
Hin6I	GCGC	7 cut(s)	343, 490, 645, 687, 1193, 1256, 1304
HinP1I	GCGC	7 cut(s)	343, 490, 645, 687, 1193, 1256, 1304
HinfI	GANTC	8 cut(s)	239, 356, 814, 820, 910, 1033, 1265, 1429
HphI	GGTGA	2 cut(s)	79, 1381
Hpy166II	GTNNAC	2 cut(s)	265, 1395
Hpy188I	TCNGA	7 cut(s)	238, 641, 819, 867, 971, 1155, 1207
Hpy188III	TCNNGA	4 cut(s)	319, 824, 1327, 1433
Hpy8I	GTNNAC	2 cut(s)	265, 1395
HpyAV	CCTTC	5 cut(s)	43, 217, 466, 571, 1117
HpyCH4III	ACNGT	4 cut(s)	505, 583, 872, 1363
HpyCH4IV	ACGT	4 cut(s)	201, 230, 294, 1136
HpyCH4V	TGCA	9 cut(s)	836, 916, 983, 1061, 1067, 1084, 1142, 1148, 1250
HpyF3I	CTNAG	2 cut(s)	426, 782
HpySE526I	ACGT	4 cut(s)	201, 230, 294, 1136
Hsp92I	GRCGYC	5 cut(s)	5, 153, 294, 396, 636
Hsp92II	CATG	6 cut(s)	310, 517, 580, 742, 1279, 1385
HspAI	GCGC	7 cut(s)	343, 490, 645, 687, 1193, 1256, 1304
Kpn2I	TCCGGA	2 cut(s)	1326, 1432
KroI	GCCGGC	1 cut(s)	721
KroNI	GCCGGC	1 cut(s)	723
Ksp22I	TGATCA	1 cut(s)	1317
Kzo9I	GATC	5 cut(s)	429, 699, 732, 1162, 1317
LmnI	GCTCC	7 cut(s)	110, 275, 395, 487, 563, 1329, 1537
Lsp1109I	GCAGC	3 cut(s)	886, 928, 1045
LweI	GCATC	5 cut(s)	552, 632, 795, 1151, 1237
MaeI	CTAG	2 cut(s)	572, 1038
MaeII	ACGT	4 cut(s)	201, 230, 294, 1136
MaeIII	GTNAC	1 cut(s)	829
MalI	GATC	5 cut(s)	431, 701, 734, 1164, 1319
MbiI	CCGCTC	1 cut(s)	270
MboI	GATC	5 cut(s)	429, 699, 732, 1162, 1317
MboII	GAAGA	6 cut(s)	10, 343, 469, 1210, 1417, 1519
MflI	RGATCY	3 cut(s)	699, 732, 1162
MhlI	GDGCHC	4 cut(s)	525, 1054, 1376, 1534
MluCI	AATT	3 cut(s)	839, 859, 1149
MlyI	GAGTC	2 cut(s)	248, 350
MmeI	TCCRAC	3 cut(s)	495, 619, 1185
Mph1103I	ATGCAT	1 cut(s)	985
MroI	TCCGGA	2 cut(s)	1326, 1432
MroNI	GCCGGC	1 cut(s)	721
MslI	CAYNNNNRTG	3 cut(s)	1274, 1296, 1298
MspA1I	CMGCKG	2 cut(s)	748, 899
MspR9I	CCNGG	6 cut(s)	379, 596, 697, 938, 957, 1022
Mva1269I	GAATGC	1 cut(s)	983
MvaI	CCWGG	3 cut(s)	379, 596, 1022
MvnI	CGCG	4 cut(s)	135, 147, 345, 363
NaeI	GCCGGC	1 cut(s)	723
NciI	CCSGG	3 cut(s)	697, 938, 957
NcoI	CCATGG	1 cut(s)	738
NdeI	CATATG	1 cut(s)	1002
NdeII	GATC	5 cut(s)	429, 699, 732, 1162, 1317
NgoMIV	GCCGGC	1 cut(s)	721
NlaIII	CATG	6 cut(s)	310, 517, 580, 742, 1279, 1385
NlaIV	GGNNCC	8 cut(s)	391, 419, 559, 701, 772, 936, 1164, 1533
NmeAIII	GCCGAG	1 cut(s)	489
NmuCI	GTSAC	1 cut(s)	829
NsiI	ATGCAT	1 cut(s)	985
NspI	RCATGY	1 cut(s)	1279
OliI	CACNNNNGTG	2 cut(s)	1296, 1298
PceI	AGGCCT	1 cut(s)	1020
PcsI	WCGNNNNNNNCGW	6 cut(s)	258, 300, 360, 393, 438, 516
PctI	GAATGC	1 cut(s)	983
PdiI	GCCGGC	1 cut(s)	723
PfeI	GAWTC	6 cut(s)	814, 820, 910, 1033, 1265, 1429
PflFI	GACNNNGTC	2 cut(s)	257, 446
PfoI	TCCNGGA	2 cut(s)	936, 955
PinAI	ACCGGT	1 cut(s)	1462
PkrI	GCNGC	9 cut(s)	124, 134, 284, 542, 670, 901, 918, 1060, 1312
PleI	GAGTC	2 cut(s)	247, 350
PpsI	GAGTC	2 cut(s)	247, 350
PpuMI	RGGWCCY	3 cut(s)	418, 568, 934
Psp124BI	GAGCTC	1 cut(s)	525
Psp5II	RGGWCCY	3 cut(s)	418, 568, 934
Psp6I	CCWGG	3 cut(s)	377, 594, 1020
PspFI	CCCAGC	1 cut(s)	744
PspGI	CCWGG	3 cut(s)	377, 594, 1020
PspN4I	GGNNCC	8 cut(s)	391, 419, 559, 701, 772, 936, 1164, 1533
PspPPI	RGGWCCY	3 cut(s)	418, 568, 934
PstI	CTGCAG	2 cut(s)	838, 918
PsuI	RGATCY	3 cut(s)	699, 732, 1162
PsyI	GACNNNGTC	2 cut(s)	257, 446
PvuII	CAGCTG	2 cut(s)	748, 899
RsaI	GTAC	4 cut(s)	200, 338, 1079, 1514
RsaNI	GTAC	4 cut(s)	199, 337, 1078, 1513
RseI	CAYNNNNRTG	3 cut(s)	1274, 1296, 1298
SacI	GAGCTC	1 cut(s)	525
SatI	GCNGC	9 cut(s)	123, 133, 283, 541, 669, 900, 917, 1059, 1311
Sau3AI	GATC	5 cut(s)	429, 699, 732, 1162, 1317
ScaI	AGTACT	2 cut(s)	338, 1514
SchI	GAGTC	2 cut(s)	248, 350
ScrFI	CCNGG	6 cut(s)	379, 596, 697, 938, 957, 1022
SduI	GDGCHC	4 cut(s)	525, 1054, 1376, 1534
SfaNI	GCATC	5 cut(s)	552, 632, 795, 1151, 1237
SfcI	CTRYAG	2 cut(s)	834, 914
SgrAI	CRCCGGYG	1 cut(s)	653
SinI	GGWCC	5 cut(s)	402, 418, 568, 751, 934
SmiMI	CAYNNNNRTG	3 cut(s)	1274, 1296, 1298
SmlI	CTYRAG	3 cut(s)	317, 1053, 1516
SmoI	CTYRAG	3 cut(s)	317, 1053, 1516
Sse9I	AATT	3 cut(s)	839, 859, 1149
SseBI	AGGCCT	1 cut(s)	1020
SspMI	CTAG	2 cut(s)	572, 1038
SstI	GAGCTC	1 cut(s)	525
StuI	AGGCCT	1 cut(s)	1020
StyD4I	CCNGG	6 cut(s)	377, 594, 695, 936, 955, 1020
StyI	CCWWGG	3 cut(s)	571, 738, 1422
TaaI	ACNGT	4 cut(s)	505, 583, 872, 1363
TaiI	ACGT	4 cut(s)	204, 233, 297, 1139
TaqI	TCGA	8 cut(s)	252, 291, 354, 432, 459, 789, 801, 823
TaqII	GACCGA	1 cut(s)	1244
TasI	AATT	3 cut(s)	839, 859, 1149
TatI	WGTACW	3 cut(s)	336, 1077, 1512
TauI	GCSGC	6 cut(s)	125, 135, 285, 543, 671, 1313
TfiI	GAWTC	6 cut(s)	814, 820, 910, 1033, 1265, 1429
TscAI	CASTG	2 cut(s)	542, 1300
TseFI	GTSAC	1 cut(s)	829
TseI	GCWGC	3 cut(s)	899, 916, 1058
Tsp45I	GTSAC	1 cut(s)	829
TspDTI	ATGAA	4 cut(s)	530, 632, 827, 989
TspGWI	ACGGA	1 cut(s)	1367
TspRI	CASTG	2 cut(s)	542, 1300
Tth111I	GACNNNGTC	2 cut(s)	257, 446
VpaK11BI	GGWCC	5 cut(s)	402, 418, 568, 751, 934
XagI	CCTNNNNNAGG	1 cut(s)	254
XceI	RCATGY	1 cut(s)	1279
XcmI	CCANNNNNNNNNTGG	1 cut(s)	745
XmaJI	CCTAGG	1 cut(s)	571
XmiI	GTMKAC	1 cut(s)	264
XspI	CTAG	2 cut(s)	572, 1038
ZraI	GACGTC	1 cut(s)	295
ZrmI	AGTACT	2 cut(s)	338, 1514
Zsp2I	ATGCAT	1 cut(s)	985

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.