Diphthamide synthase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04480 |
| fragaria_vesca | FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 |
| malus_domestica | MD04G1230700.v1.1 |
| prunus_persica | Prupe.6G350500_v2.0.a1 |
| pyrus_communis | pycom04g20440 |
| rosa_chinensis | RchiOBHm_Chr2g0149091 RchiOBHm_Chr3g0449521 RchiOBHm_Chr6g0277751 |
| rosa_laevigata | RLG00000025818 RLG00000036278 |
| rosa_multiflora | Rmu_co8274617.1_g000001 Rmu_sc0000430.1_g000014 |
| rosa_roxburghii | Rroxscaffold_6G00427480 Rroxscaffold_7G00175750 |
| rosa_rugosa | Rorug02G0622400 Rorug02G0622500 Rorug02G0622600 |
| rosa_samantha | Rh2AG410700 Rh2AG659700 Rh2BG670500 Rh2BG670600 Rh2CG396800 Rh3AG020100 Rh3BG020200 Rh3CG018900 Rh3DG020100 |
| rosa_wichuraiana | Rw2G033330 Rw2G033560 Rw3G001600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1867 |
| AccB1I | GGYRCC | 3 cut(s) | 1294, 1403, 2168 |
| AccBSI | CCGCTC | 1 cut(s) | 1995 |
| AciI | CCGC | 6 cut(s) | 24, 370, 594, 1177, 1995, 2058 |
| AclI | AACGTT | 1 cut(s) | 617 |
| AclWI | GGATC | 6 cut(s) | 216, 229, 307, 503, 516, 1613 |
| AcoI | YGGCCR | 1 cut(s) | 70 |
| AcsI | RAATTY | 3 cut(s) | 94, 1515, 1918 |
| AcuI | CTGAAG | 3 cut(s) | 1464, 1629, 2166 |
| AcyI | GRCGYC | 1 cut(s) | 1404 |
| AdeI | CACNNNGTG | 1 cut(s) | 1932 |
| AfaI | GTAC | 4 cut(s) | 979, 1183, 1275, 1831 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 2165 |
| AflIII | ACRYGT | 2 cut(s) | 138, 1270 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1872 |
| AjnI | CCWGG | 5 cut(s) | 864, 1320, 1542, 1753, 1816 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1038, 1070 |
| Alw26I | GTCTC | 1 cut(s) | 828 |
| AlwI | GGATC | 6 cut(s) | 216, 229, 307, 503, 516, 1613 |
| AoxI | GGCC | 2 cut(s) | 70, 1662 |
| ApaI | GGGCCC | 1 cut(s) | 1666 |
| ApeKI | GCWGC | 6 cut(s) | 367, 494, 547, 857, 1862, 2105 |
| ApoI | RAATTY | 3 cut(s) | 94, 1515, 1918 |
| AseI | ATTAAT | 1 cut(s) | 585 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1068, 1603 |
| AspLEI | GCGC | 1 cut(s) | 1406 |
| AspS9I | GGNCC | 3 cut(s) | 1310, 1662, 1663 |
| AsuC2I | CCSGG | 2 cut(s) | 961, 2173 |
| AsuHPI | GGTGA | 5 cut(s) | 608, 950, 1904, 2074, 2197 |
| AvaII | GGWCC | 1 cut(s) | 1310 |
| BaeGI | GKGCMC | 3 cut(s) | 1297, 1666, 2058 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 315, 348, 1116, 1149 |
| BalI | TGGCCA | 1 cut(s) | 72 |
| BamHI | GGATCC | 2 cut(s) | 221, 508 |
| BanI | GGYRCC | 3 cut(s) | 1294, 1403, 2168 |
| BanII | GRGCYC | 1 cut(s) | 1666 |
| BbsI | GAAGAC | 3 cut(s) | 1573, 2039, 2172 |
| BbvI | GCAGC | 6 cut(s) | 354, 481, 559, 844, 1849, 2092 |
| BccI | CCATC | 7 cut(s) | 846, 1180, 1528, 1877, 1890, 1933, 2150 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2084, 2118 |
| BciT130I | CCWGG | 5 cut(s) | 866, 1322, 1544, 1755, 1818 |
| BciVI | GTATCC | 1 cut(s) | 71 |
| BcnI | CCSGG | 2 cut(s) | 961, 2173 |
| BcoDI | GTCTC | 1 cut(s) | 828 |
| BfaI | CTAG | 3 cut(s) | 390, 410, 1886 |
| BfmI | CTRYAG | 2 cut(s) | 247, 1113 |
| BfoI | RGCGCY | 1 cut(s) | 1407 |
| BfuAI | ACCTGC | 1 cut(s) | 1867 |
| BfuI | GTATCC | 1 cut(s) | 71 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1401 |
| BglII | AGATCT | 1 cut(s) | 1003 |
| BisI | GCNGC | 6 cut(s) | 368, 495, 548, 858, 1863, 2106 |
| BlpI | GCTNAGC | 1 cut(s) | 242 |
| BlsI | GCNGC | 6 cut(s) | 369, 496, 549, 859, 1864, 2107 |
| Bme1390I | CCNGG | 7 cut(s) | 866, 961, 1322, 1544, 1755, 1818, 2173 |
| Bme18I | GGWCC | 1 cut(s) | 1310 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1872 |
| BmgT120I | GGNCC | 3 cut(s) | 1310, 1662, 1663 |
| BmiI | GGNNCC | 9 cut(s) | 223, 510, 1296, 1405, 1600, 1663, 1664, 2139, 2170 |
| BmrFI | CCNGG | 7 cut(s) | 866, 961, 1322, 1544, 1755, 1818, 2173 |
| BmrI | ACTGGG | 3 cut(s) | 872, 1293, 1771 |
| BmsI | GCATC | 8 cut(s) | 90, 241, 359, 548, 844, 862, 1546, 2195 |
| BmuI | ACTGGG | 3 cut(s) | 872, 1293, 1771 |
| BpiI | GAAGAC | 3 cut(s) | 1573, 2039, 2172 |
| BpmI | CTGGAG | 3 cut(s) | 690, 1028, 1740 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 242 |
| BpuEI | CTTGAG | 1 cut(s) | 1729 |
| BpuMI | CCSGG | 2 cut(s) | 961, 2173 |
| BsaHI | GRCGYC | 1 cut(s) | 1404 |
| BsaI | GGTCTC | 1 cut(s) | 828 |
| BsaJI | CCNNGG | 6 cut(s) | 217, 498, 726, 844, 1396, 2190 |
| BsaWI | WCCGGW | 1 cut(s) | 338 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 2165 |
| Bse1I | ACTGG | 7 cut(s) | 630, 707, 878, 1299, 1723, 1766, 2134 |
| Bse3DI | GCAATG | 2 cut(s) | 437, 2115 |
| BseBI | CCWGG | 5 cut(s) | 866, 1322, 1544, 1755, 1818 |
| BseDI | CCNNGG | 6 cut(s) | 217, 498, 726, 844, 1396, 2190 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 2165 |
| BseMI | GCAATG | 2 cut(s) | 437, 2115 |
| BseMII | CTCAG | 1 cut(s) | 1160 |
| BseNI | ACTGG | 7 cut(s) | 630, 707, 878, 1299, 1723, 1766, 2134 |
| BseSI | GKGCMC | 3 cut(s) | 1297, 1666, 2058 |
| BseXI | GCAGC | 6 cut(s) | 354, 481, 559, 844, 1849, 2092 |
| BsgI | GTGCAG | 1 cut(s) | 668 |
| BshFI | GGCC | 2 cut(s) | 72, 1664 |
| BshNI | GGYRCC | 3 cut(s) | 1294, 1403, 2168 |
| BsiSI | CCGG | 3 cut(s) | 339, 961, 2172 |
| BslFI | GGGAC | 2 cut(s) | 1380, 1628 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 2165 |
| BsmAI | GTCTC | 1 cut(s) | 828 |
| BsmFI | GGGAC | 2 cut(s) | 1380, 1628 |
| BsmI | GAATGC | 2 cut(s) | 188, 2090 |
| BsnI | GGCC | 2 cut(s) | 72, 1664 |
| Bso31I | GGTCTC | 1 cut(s) | 828 |
| Bsp120I | GGGCCC | 1 cut(s) | 1662 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1297, 1666, 2058 |
| Bsp1407I | TGTACA | 3 cut(s) | 977, 1273, 1829 |
| Bsp143I | GATC | 7 cut(s) | 221, 312, 430, 508, 1003, 1618, 1648 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 242 |
| Bsp19I | CCATGG | 2 cut(s) | 498, 2190 |
| BspACI | CCGC | 6 cut(s) | 24, 370, 594, 1177, 1995, 2058 |
| BspANI | GGCC | 2 cut(s) | 72, 1664 |
| BspCNI | CTCAG | 1 cut(s) | 1159 |
| BspHI | TCATGA | 2 cut(s) | 799, 1876 |
| BspLI | GGNNCC | 9 cut(s) | 223, 510, 1296, 1405, 1600, 1663, 1664, 2139, 2170 |
| BspMI | ACCTGC | 1 cut(s) | 1867 |
| BspPI | GGATC | 6 cut(s) | 216, 229, 307, 503, 516, 1613 |
| BspT107I | GGYRCC | 3 cut(s) | 1294, 1403, 2168 |
| BspTNI | GGTCTC | 1 cut(s) | 828 |
| BsrBI | CCGCTC | 1 cut(s) | 1995 |
| BsrDI | GCAATG | 2 cut(s) | 437, 2115 |
| BsrGI | TGTACA | 3 cut(s) | 977, 1273, 1829 |
| BsrI | ACTGG | 7 cut(s) | 630, 707, 878, 1299, 1723, 1766, 2134 |
| BssECI | CCNNGG | 6 cut(s) | 217, 498, 726, 844, 1396, 2190 |
| BssMI | GATC | 7 cut(s) | 221, 312, 430, 508, 1003, 1618, 1648 |
| BssNI | GRCGYC | 1 cut(s) | 1404 |
| BssT1I | CCWWGG | 6 cut(s) | 217, 498, 726, 844, 1396, 2190 |
| Bst2UI | CCWGG | 5 cut(s) | 866, 1322, 1544, 1755, 1818 |
| Bst4CI | ACNGT | 7 cut(s) | 151, 484, 1362, 1439, 1466, 1505, 1834 |
| BstACI | GRCGYC | 1 cut(s) | 1404 |
| BstAUI | TGTACA | 3 cut(s) | 977, 1273, 1829 |
| BstC8I | GCNNGC | 4 cut(s) | 105, 862, 1776, 2058 |
| BstDEI | CTNAG | 3 cut(s) | 242, 1146, 2164 |
| BstDSI | CCRYGG | 2 cut(s) | 498, 2190 |
| BstH2I | RGCGCY | 1 cut(s) | 1407 |
| BstHHI | GCGC | 1 cut(s) | 1406 |
| BstKTI | GATC | 7 cut(s) | 224, 315, 433, 511, 1006, 1621, 1651 |
| BstMAI | GTCTC | 1 cut(s) | 828 |
| BstMBI | GATC | 7 cut(s) | 221, 312, 430, 508, 1003, 1618, 1648 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 36, 238, 556, 1201, 1401 |
| BstNI | CCWGG | 5 cut(s) | 866, 1322, 1544, 1755, 1818 |
| BstNSI | RCATGY | 4 cut(s) | 142, 864, 1274, 1778 |
| BstSCI | CCNGG | 7 cut(s) | 864, 959, 1320, 1542, 1753, 1816, 2171 |
| BstSFI | CTRYAG | 2 cut(s) | 247, 1113 |
| BstSLI | GKGCMC | 3 cut(s) | 1297, 1666, 2058 |
| BstV1I | GCAGC | 6 cut(s) | 354, 481, 559, 844, 1849, 2092 |
| BstV2I | GAAGAC | 3 cut(s) | 1573, 2039, 2172 |
| BstX2I | RGATCY | 4 cut(s) | 221, 312, 508, 1003 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 505, 1889 |
| BstYI | RGATCY | 4 cut(s) | 221, 312, 508, 1003 |
| BsuI | GTATCC | 1 cut(s) | 71 |
| BsuRI | GGCC | 2 cut(s) | 72, 1664 |
| BtgI | CCRYGG | 2 cut(s) | 498, 2190 |
| BtsI | GCAGTG | 3 cut(s) | 93, 781, 1452 |
| BtsIMutI | CAGTG | 6 cut(s) | 93, 489, 623, 781, 1444, 1452 |
| BveI | ACCTGC | 1 cut(s) | 1867 |
| Cac8I | GCNNGC | 4 cut(s) | 105, 862, 1776, 2058 |
| CciI | TCATGA | 2 cut(s) | 799, 1876 |
| CfoI | GCGC | 1 cut(s) | 1406 |
| Cfr13I | GGNCC | 3 cut(s) | 1310, 1662, 1663 |
| Csp6I | GTAC | 4 cut(s) | 978, 1182, 1274, 1830 |
| CviQI | GTAC | 4 cut(s) | 978, 1182, 1274, 1830 |
| DdeI | CTNAG | 3 cut(s) | 242, 1146, 2164 |
| DinI | GGCGCC | 1 cut(s) | 1405 |
| DpnI | GATC | 7 cut(s) | 223, 314, 432, 510, 1005, 1620, 1650 |
| DpnII | GATC | 7 cut(s) | 221, 312, 430, 508, 1003, 1618, 1648 |
| DraI | TTTAAA | 2 cut(s) | 1020, 1537 |
| DraIII | CACNNNGTG | 1 cut(s) | 1932 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1872 |
| EaeI | YGGCCR | 1 cut(s) | 70 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1872 |
| Eco130I | CCWWGG | 6 cut(s) | 217, 498, 726, 844, 1396, 2190 |
| Eco24I | GRGCYC | 1 cut(s) | 1666 |
| Eco31I | GGTCTC | 1 cut(s) | 828 |
| Eco47I | GGWCC | 1 cut(s) | 1310 |
| Eco57I | CTGAAG | 3 cut(s) | 1464, 1629, 2166 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1662, 1663 |
| EcoRII | CCWGG | 5 cut(s) | 864, 1320, 1542, 1753, 1816 |
| EcoT14I | CCWWGG | 6 cut(s) | 217, 498, 726, 844, 1396, 2190 |
| EcoT22I | ATGCAT | 2 cut(s) | 188, 2092 |
| EcoT38I | GRGCYC | 1 cut(s) | 1666 |
| EgeI | GGCGCC | 1 cut(s) | 1405 |
| EheI | GGCGCC | 1 cut(s) | 1405 |
| ErhI | CCWWGG | 6 cut(s) | 217, 498, 726, 844, 1396, 2190 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1270, 1302, 1650, 1682 |
| FaqI | GGGAC | 2 cut(s) | 1380, 1628 |
| FauI | CCCGC | 3 cut(s) | 363, 1184, 2065 |
| FauNDI | CATATG | 1 cut(s) | 1129 |
| Fnu4HI | GCNGC | 6 cut(s) | 368, 495, 548, 858, 1863, 2106 |
| FriOI | GRGCYC | 1 cut(s) | 1666 |
| Fsp4HI | GCNGC | 6 cut(s) | 368, 495, 548, 858, 1863, 2106 |
| FspBI | CTAG | 3 cut(s) | 390, 410, 1886 |
| GlaI | GCGC | 1 cut(s) | 1405 |
| GluI | GCNGC | 6 cut(s) | 368, 495, 548, 858, 1863, 2106 |
| GsuI | CTGGAG | 3 cut(s) | 690, 1028, 1740 |
| HaeII | RGCGCY | 1 cut(s) | 1407 |
| HaeIII | GGCC | 2 cut(s) | 72, 1664 |
| HapII | CCGG | 3 cut(s) | 339, 961, 2172 |
| HhaI | GCGC | 1 cut(s) | 1406 |
| Hin1I | GRCGYC | 1 cut(s) | 1404 |
| Hin6I | GCGC | 1 cut(s) | 1404 |
| HinP1I | GCGC | 1 cut(s) | 1404 |
| HincII | GTYRAC | 3 cut(s) | 621, 646, 883 |
| HindII | GTYRAC | 3 cut(s) | 621, 646, 883 |
| HindIII | AAGCTT | 1 cut(s) | 239 |
| HinfI | GANTC | 9 cut(s) | 113, 213, 256, 654, 695, 971, 1031, 1368, 1790 |
| HpaI | GTTAAC | 2 cut(s) | 646, 883 |
| HpaII | CCGG | 3 cut(s) | 339, 961, 2172 |
| HphI | GGTGA | 5 cut(s) | 608, 950, 1904, 2074, 2197 |
| Hpy166II | GTNNAC | 7 cut(s) | 121, 621, 646, 883, 1856, 2082, 2213 |
| Hpy188I | TCNGA | 8 cut(s) | 206, 237, 355, 694, 1609, 1803, 2118, 2226 |
| Hpy8I | GTNNAC | 7 cut(s) | 121, 621, 646, 883, 1856, 2082, 2213 |
| HpyAV | CCTTC | 6 cut(s) | 201, 327, 481, 593, 802, 1501 |
| HpyCH4III | ACNGT | 7 cut(s) | 151, 484, 1362, 1439, 1466, 1505, 1834 |
| HpyCH4IV | ACGT | 2 cut(s) | 617, 944 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 36, 238, 556, 1201, 1401 |
| HpyF3I | CTNAG | 3 cut(s) | 242, 1146, 2164 |
| HpySE526I | ACGT | 2 cut(s) | 617, 944 |
| Hsp92I | GRCGYC | 1 cut(s) | 1404 |
| HspAI | GCGC | 1 cut(s) | 1404 |
| KasI | GGCGCC | 1 cut(s) | 1403 |
| KspAI | GTTAAC | 2 cut(s) | 646, 883 |
| Kzo9I | GATC | 7 cut(s) | 221, 312, 430, 508, 1003, 1618, 1648 |
| LmnI | GCTCC | 1 cut(s) | 709 |
| Lsp1109I | GCAGC | 6 cut(s) | 354, 481, 559, 844, 1849, 2092 |
| LweI | GCATC | 8 cut(s) | 90, 241, 359, 548, 844, 862, 1546, 2195 |
| MaeI | CTAG | 3 cut(s) | 390, 410, 1886 |
| MaeII | ACGT | 2 cut(s) | 617, 944 |
| MaeIII | GTNAC | 4 cut(s) | 322, 776, 1757, 1892 |
| MalI | GATC | 7 cut(s) | 223, 314, 432, 510, 1005, 1620, 1650 |
| MbiI | CCGCTC | 1 cut(s) | 1995 |
| MboI | GATC | 7 cut(s) | 221, 312, 430, 508, 1003, 1618, 1648 |
| MfeI | CAATTG | 1 cut(s) | 1185 |
| MflI | RGATCY | 4 cut(s) | 221, 312, 508, 1003 |
| MhlI | GDGCHC | 3 cut(s) | 1297, 1666, 2058 |
| MlsI | TGGCCA | 1 cut(s) | 72 |
| MluNI | TGGCCA | 1 cut(s) | 72 |
| Mly113I | GGCGCC | 1 cut(s) | 1404 |
| MlyI | GAGTC | 2 cut(s) | 250, 1362 |
| MmeI | TCCRAC | 3 cut(s) | 133, 486, 2096 |
| MnlI | CCTC | 8 cut(s) | 523, 596, 645, 1003, 1386, 1394, 2019, 2169 |
| Mox20I | TGGCCA | 1 cut(s) | 72 |
| Mph1103I | ATGCAT | 2 cut(s) | 188, 2092 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1068, 1603 |
| MscI | TGGCCA | 1 cut(s) | 72 |
| MseI | TTAA | 9 cut(s) | 293, 585, 645, 882, 1019, 1461, 1536, 1566, 1677 |
| MslI | CAYNNNNRTG | 1 cut(s) | 418 |
| Msp20I | TGGCCA | 1 cut(s) | 72 |
| MspA1I | CMGCKG | 1 cut(s) | 39 |
| MspI | CCGG | 3 cut(s) | 339, 961, 2172 |
| MspR9I | CCNGG | 7 cut(s) | 866, 961, 1322, 1544, 1755, 1818, 2173 |
| MunI | CAATTG | 1 cut(s) | 1185 |
| Mva1269I | GAATGC | 2 cut(s) | 188, 2090 |
| MvaI | CCWGG | 5 cut(s) | 866, 1322, 1544, 1755, 1818 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 36, 238, 556, 1201, 1401 |
| NarI | GGCGCC | 1 cut(s) | 1404 |
| NciI | CCSGG | 2 cut(s) | 961, 2173 |
| NcoI | CCATGG | 2 cut(s) | 498, 2190 |
| NdeI | CATATG | 1 cut(s) | 1129 |
| NdeII | GATC | 7 cut(s) | 221, 312, 430, 508, 1003, 1618, 1648 |
| NlaIV | GGNNCC | 9 cut(s) | 223, 510, 1296, 1405, 1600, 1663, 1664, 2139, 2170 |
| NmuCI | GTSAC | 3 cut(s) | 322, 776, 1892 |
| NsiI | ATGCAT | 2 cut(s) | 188, 2092 |
| NspI | RCATGY | 4 cut(s) | 142, 864, 1274, 1778 |
| PaeI | GCATGC | 2 cut(s) | 864, 1778 |
| PagI | TCATGA | 2 cut(s) | 799, 1876 |
| PciI | ACATGT | 2 cut(s) | 138, 1270 |
| PctI | GAATGC | 2 cut(s) | 188, 2090 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1068, 1603 |
| PfeI | GAWTC | 7 cut(s) | 113, 213, 654, 695, 971, 1031, 1790 |
| PfoI | TCCNGGA | 2 cut(s) | 1542, 1816 |
| PkrI | GCNGC | 6 cut(s) | 369, 496, 549, 859, 1864, 2107 |
| PleI | GAGTC | 2 cut(s) | 250, 1362 |
| PluTI | GGCGCC | 1 cut(s) | 1407 |
| PpsI | GAGTC | 2 cut(s) | 250, 1362 |
| PscI | ACATGT | 2 cut(s) | 138, 1270 |
| PshBI | ATTAAT | 1 cut(s) | 585 |
| Psp1406I | AACGTT | 1 cut(s) | 617 |
| Psp6I | CCWGG | 5 cut(s) | 864, 1320, 1542, 1753, 1816 |
| PspGI | CCWGG | 5 cut(s) | 864, 1320, 1542, 1753, 1816 |
| PspN4I | GGNNCC | 9 cut(s) | 223, 510, 1296, 1405, 1600, 1663, 1664, 2139, 2170 |
| PspOMI | GGGCCC | 1 cut(s) | 1662 |
| PspPI | GGNCC | 3 cut(s) | 1310, 1662, 1663 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2012, 2044 |
| PsuI | RGATCY | 4 cut(s) | 221, 312, 508, 1003 |
| PvuII | CAGCTG | 1 cut(s) | 39 |
| RsaI | GTAC | 4 cut(s) | 979, 1183, 1275, 1831 |
| RsaNI | GTAC | 4 cut(s) | 978, 1182, 1274, 1830 |
| RseI | CAYNNNNRTG | 1 cut(s) | 418 |
| SaqAI | TTAA | 9 cut(s) | 293, 585, 645, 882, 1019, 1461, 1536, 1566, 1677 |
| SatI | GCNGC | 6 cut(s) | 368, 495, 548, 858, 1863, 2106 |
| Sau3AI | GATC | 7 cut(s) | 221, 312, 430, 508, 1003, 1618, 1648 |
| Sau96I | GGNCC | 3 cut(s) | 1310, 1662, 1663 |
| SchI | GAGTC | 2 cut(s) | 250, 1362 |
| ScrFI | CCNGG | 7 cut(s) | 866, 961, 1322, 1544, 1755, 1818, 2173 |
| SduI | GDGCHC | 3 cut(s) | 1297, 1666, 2058 |
| SfaNI | GCATC | 8 cut(s) | 90, 241, 359, 548, 844, 862, 1546, 2195 |
| SfcI | CTRYAG | 2 cut(s) | 247, 1113 |
| SfoI | GGCGCC | 1 cut(s) | 1405 |
| SinI | GGWCC | 1 cut(s) | 1310 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 418 |
| SmlI | CTYRAG | 1 cut(s) | 1744 |
| SmoI | CTYRAG | 1 cut(s) | 1744 |
| SphI | GCATGC | 2 cut(s) | 864, 1778 |
| SsiI | CCGC | 6 cut(s) | 24, 370, 594, 1177, 1995, 2058 |
| SspDI | GGCGCC | 1 cut(s) | 1403 |
| SspMI | CTAG | 3 cut(s) | 390, 410, 1886 |
| StyD4I | CCNGG | 7 cut(s) | 864, 959, 1320, 1542, 1753, 1816, 2171 |
| StyI | CCWWGG | 6 cut(s) | 217, 498, 726, 844, 1396, 2190 |
| TaaI | ACNGT | 7 cut(s) | 151, 484, 1362, 1439, 1466, 1505, 1834 |
| TaiI | ACGT | 2 cut(s) | 620, 947 |
| TaqI | TCGA | 2 cut(s) | 652, 2094 |
| TatI | WGTACW | 4 cut(s) | 977, 1181, 1273, 1829 |
| TfiI | GAWTC | 7 cut(s) | 113, 213, 654, 695, 971, 1031, 1790 |
| Tru1I | TTAA | 9 cut(s) | 293, 585, 645, 882, 1019, 1461, 1536, 1566, 1677 |
| Tru9I | TTAA | 9 cut(s) | 293, 585, 645, 882, 1019, 1461, 1536, 1566, 1677 |
| TscAI | CASTG | 6 cut(s) | 93, 489, 630, 781, 1444, 1452 |
| TseFI | GTSAC | 3 cut(s) | 322, 776, 1892 |
| TseI | GCWGC | 6 cut(s) | 367, 494, 547, 857, 1862, 2105 |
| Tsp45I | GTSAC | 3 cut(s) | 322, 776, 1892 |
| TspGWI | ACGGA | 3 cut(s) | 186, 1352, 2003 |
| TspRI | CASTG | 6 cut(s) | 93, 489, 630, 781, 1444, 1452 |
| VpaK11BI | GGWCC | 1 cut(s) | 1310 |
| VspI | ATTAAT | 1 cut(s) | 585 |
| XapI | RAATTY | 3 cut(s) | 94, 1515, 1918 |
| XceI | RCATGY | 4 cut(s) | 142, 864, 1274, 1778 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1414 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1068, 1603 |
| XspI | CTAG | 3 cut(s) | 390, 410, 1886 |
| Zsp2I | ATGCAT | 2 cut(s) | 188, 2092 |