Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000430.1

Orthogroup ID

OG0002016

Physical Location & Seq

Genomic Coordinates Forward (+)

43408 .. 56300

Gene Structure 12893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000430.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3048 bp

atggagggaggtggcggcagtgacacacttgccgatggttctaccggcagtgggggaattccgccctgcggagaagaagagcgcaaacttttcgtgatcgagtcatacactaacaccgtggaagatctgaggagtgggattcaacaggtgttgaatctcgatccttccaaagagttttccctcagtttttttcatcaaaaccgcgaagttcttcgagatctcgggttgaaagaaagggccacattcaccctcagtgagagaatcgttcctatttatctaagtttcgatgagttttggattagactaatggaggcatcaacgaccctaattcatcatgatactttgatttgtaggaatgttggggccacattcacccttagtgagagaaccgttcctatttctctaagcttcgatgaggttttggatgggactaatgaaggcgtcaacgagaatgttggggccacattcaccctcagcgagagaaccgctcctatttctctgagcttcgatgaggttttggatgggactaaattagtcccatccagcagtgagttgtgtcaaggaattaccttcaccatccattccggctgtcggcatagaagaatcacatcgccatcactaatcccaatgactaatggaggcgtcaacgagaatgatggggctggtatggtaatcaagatgctcctgctgttgttgatggaggtttcgtttaaaaaagctctaagctttaggttctgcgctgttgctgtggagatgaaggtggtggctttagtaagcggcggcaaggacagctgctatgccatgatgaagtgcctccaatacggccaccagattgttgctgtggcaaatttgatgccagctgatgattcggtggacgagcttgatagttacatgtatcaaactgttgggcaccagatagttatcagctatgcagaatgcatgggagtgccattgttcagaaggcgaatacaaggatccacaaggcatcagaagcttagctatagaatgactcctggcgatgaagtcgaagatatgtttattttgttaaatgaagtgaaacgacagattccttctgtcactgctgtatcttctggtgctattgcatcagactaccaaaggctgcgggtggaaagtgtctgttcaaggttaggtcttgtttctctagcattcttgtggaaacaagatcagtctttgctccttcaagaaatgataactagtgggattgtggcgattacagtgaaggcaactttgcataaggagatacttcacatggctggacaattagggctcaaccctcccacaatgattttatgtgatggaggtgtcatggatgagctagcaaaagcactggacaatagtgaagcagtggcaaaaagctttaactgctcaatatctacttccactattatgttatatggtattaatgtatgtggtgaaggaggggaatatgaaacattaacactggattgccctctctttgttaatgctcgaatcatgcttgatgagtctcgagtagtaatgcactcttctgattccatagctccagttggggtgcttcatccggtggcttttcatttgcaaagtaaggcagagtcccattctttggagagcaatgacaatgctcatgagatctgtgaagagagggtgggttctctatttgaagtgcaaggacacacacaagcatttgatgccatttgccaggttgatgctgcagtggatgtcttagttaaacttcctgaacataaacttcacatttcaagaacacaaaaggacgatacattttctatttgttgctggttgcaagattcttgtacaacttctgcaggtttgcaagaagacctggaggctgttctgaagaaaattgaatcgctactcgtggaatatggttttggttgggaatatgtgctctacattcatctttatattgctgatatgggtgggttttcttcagcaaatgatacatatgtgagatatataacccatgagaagtgcccgtttggtgttccatctcgcagtacagttgaactacctttgttgcaagtgggtttaggtaatgcatacatggaagttctagttgctaatgaccacaccaaaagagttctgcatgtacaaagtatatcttgttgggcacccagttgtattggaccttatagccaggcaactttgcataaggagatacttcacatggctggacaattagggctcaaccctcccacaatgactttatgtgatggaggtgtcatggatgagctagcaaaagcactggacaatagtgaagcagtggcaaaaagctttaactgctcaatatctacttccactattatgtttgtcaactactgttcaactaaaattccgctgtcggatggattaaatcttcatgacaagcataaagctttccttaaacaaacgagggacttcaattcagataaaggaaacaattctgaagcattggaacccattttcttatatgtccttctcccggatctgccaaaaggggcgcttgtagaagttaaacctgttctatttgttgcagaagatattgaagcaacaattagggatgtgaaagaccaatctcactcaagatccactggttactggggttttcaacatgcaaattggcatgattcctgcattcaaaagtgcattgttcctgaaaagttatgtgcagttgttttgtctgtgagtagcgaacttgctgccatgatctgtgacaaggacaaaggggatcatcaaaattctgtcataggaaggcagatggatagagtattaagattttgcttatatcttcttgataagattatcatagagaacgattttggttgggaagacactatgtatttgaggttctactttccaactagtcttcaagtgactctggatgcactgtctttcatgttgaccaatgcatttagtgaatttgctgagatgaatcggaatatcaagattggcaaggaccccatcttcaacctagttcctgtcttaggtgctgggaagtcttcagcatcaatgaatgatatcatcacctgtgaactattggctcgcaagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Diphthami_syn_2 Pkinase Ribonuc_L-PSP

Protein Analysis

1015

Amino Acids

112.05

Weight (kDa)

5.14

Isoelectric Point (pI)

41.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002016)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04480
fragaria_vesca	FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810
malus_domestica	MD04G1230700.v1.1
prunus_persica	Prupe.6G350500_v2.0.a1
pyrus_communis	pycom04g20440
rosa_chinensis	RchiOBHm_Chr2g0149091 RchiOBHm_Chr3g0449521 RchiOBHm_Chr6g0277751
rosa_laevigata	RLG00000025818 RLG00000036278
rosa_multiflora	Rmu_co8274617.1_g000001 Rmu_sc0000430.1_g000014
rosa_roxburghii	Rroxscaffold_6G00427480 Rroxscaffold_7G00175750
rosa_rugosa	Rorug02G0622400 Rorug02G0622500 Rorug02G0622600
rosa_samantha	Rh2AG410700 Rh2AG659700 Rh2BG670500 Rh2BG670600 Rh2CG396800 Rh3AG020100 Rh3BG020200 Rh3CG018900 Rh3DG020100
rosa_wichuraiana	Rw2G033330 Rw2G033560 Rw3G001600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1814
AccB1I	GGYRCC	2 cut(s)	909, 2128
AccB7I	CCANNNNNTGG	1 cut(s)	1603
AccBSI	CCGCTC	1 cut(s)	488
AccII	CGCG	1 cut(s)	204
AciI	CCGC	9 cut(s)	15, 62, 69, 202, 486, 777, 780, 1123, 2354
AclWI	GGATC	6 cut(s)	155, 969, 982, 2490, 2577, 2733
AcoI	YGGCCR	1 cut(s)	823
AcsI	RAATTY	5 cut(s)	57, 847, 2349, 2734, 2915
AcuI	CTGAAG	4 cut(s)	1874, 1932, 2463, 2982
AcyI	GRCGYC	2 cut(s)	441, 642
AfaI	GTAC	3 cut(s)	1813, 2017, 2109
AfiI	CCNNNNNNNGG	6 cut(s)	51, 68, 591, 1603, 2479, 2981
AflIII	ACRYGT	1 cut(s)	891
AhlI	ACTAGT	2 cut(s)	1214, 2858
AjnI	CCWGG	4 cut(s)	1012, 1698, 1839, 2154
AjuI	GAANNNNNNNTTGG	2 cut(s)	1872, 1904
Alw21I	GWGCWC	1 cut(s)	1908
Alw26I	GTCTC	1 cut(s)	1512
AlwI	GGATC	6 cut(s)	155, 969, 982, 2490, 2577, 2733
Ama87I	CYCGRG	2 cut(s)	221, 1509
AoxI	GGCC	4 cut(s)	237, 363, 459, 823
ApeKI	GCWGC	4 cut(s)	792, 1120, 1709, 2696
ApoI	RAATTY	5 cut(s)	57, 847, 2349, 2734, 2915
AseI	ATTAAT	1 cut(s)	1422
Asp700I	GAANNNNTTC	2 cut(s)	210, 2437
AspLEI	GCGC	3 cut(s)	84, 740, 2500
AspS9I	GGNCC	5 cut(s)	237, 363, 459, 2144, 2953
AsuC2I	CCSGG	1 cut(s)	2480
AsuHPI	GGTGA	6 cut(s)	238, 364, 460, 565, 1445, 3013
AsuNHI	GCTAGC	2 cut(s)	1336, 2251
AvaI	CYCGRG	2 cut(s)	221, 1509
AvaII	GGWCC	2 cut(s)	2144, 2953
BaeGI	GKGCMC	3 cut(s)	912, 1994, 2131
BaeI	ACNNNNGTAYC	4 cut(s)	1068, 1101, 1950, 1983
BamHI	GGATCC	1 cut(s)	974
BanI	GGYRCC	2 cut(s)	909, 2128
BanII	GRGCYC	2 cut(s)	1290, 2205
BauI	CACGAG	1 cut(s)	1874
BbsI	GAAGAC	4 cut(s)	1842, 2832, 2855, 2988
Bbv12I	GWGCWC	1 cut(s)	1908
BbvCI	CCTCAGC	1 cut(s)	473
BbvI	GCAGC	4 cut(s)	779, 1107, 1696, 2683
BceAI	ACGGC	1 cut(s)	838
BcgI	CGANNNNNNTGC	4 cut(s)	73, 107, 2678, 2712
BciT130I	CCWGG	4 cut(s)	1014, 1700, 1841, 2156
BcnI	CCSGG	1 cut(s)	2480
BcoDI	GTCTC	1 cut(s)	1512
BcuI	ACTAGT	2 cut(s)	1214, 2858
BfaI	CTAG	7 cut(s)	1163, 1215, 1337, 2072, 2252, 2859, 2969
BfmI	CTRYAG	3 cut(s)	1000, 1710, 1821
BfoI	RGCGCY	1 cut(s)	2501
BfuAI	ACCTGC	1 cut(s)	1814
BglII	AGATCT	3 cut(s)	124, 217, 1629
BisI	GCNGC	7 cut(s)	16, 778, 781, 793, 1121, 1710, 2697
BlpI	GCTNAGC	1 cut(s)	995
BlsI	GCNGC	7 cut(s)	17, 779, 782, 794, 1122, 1711, 2698
Bme1390I	CCNGG	5 cut(s)	1014, 1700, 1841, 2156, 2480
Bme18I	GGWCC	2 cut(s)	2144, 2953
BmeT110I	CYCGRG	2 cut(s)	221, 1509
BmgT120I	GGNCC	5 cut(s)	237, 363, 459, 2144, 2953
BmiI	GGNNCC	7 cut(s)	364, 460, 911, 976, 2130, 2454, 2955
BmrFI	CCNGG	5 cut(s)	1014, 1700, 1841, 2156, 2480
BmrI	ACTGGG	2 cut(s)	2127, 2605
BmsI	GCATC	9 cut(s)	323, 669, 843, 994, 1112, 1678, 1696, 2869, 3011
BmtI	GCTAGC	2 cut(s)	1340, 2255
BmuI	ACTGGG	2 cut(s)	2127, 2605
BpiI	GAAGAC	4 cut(s)	1842, 2832, 2855, 2988
BplI	GAGNNNNNCTC	2 cut(s)	472, 504
BpmI	CTGGAG	2 cut(s)	1527, 1862
Bpu10I	CCTNAGC	1 cut(s)	473
Bpu1102I	GCTNAGC	1 cut(s)	995
BpuEI	CTTGAG	1 cut(s)	2563
BpuMI	CCSGG	1 cut(s)	2480
BsaBI	GATNNNNATC	1 cut(s)	920
BsaHI	GRCGYC	2 cut(s)	441, 642
BsaJI	CCNNGG	1 cut(s)	117
BsaWI	WCCGGW	1 cut(s)	1561
BsaXI	ACNNNNNCTCC	2 cut(s)	692, 722
Bsc4I	CCNNNNNNNGG	6 cut(s)	51, 68, 591, 1603, 2479, 2981
Bse118I	RCCGGY	1 cut(s)	44
Bse1I	ACTGG	7 cut(s)	1353, 1467, 1544, 2133, 2268, 2593, 2600
Bse3DI	GCAATG	1 cut(s)	1618
Bse8I	GATNNNNATC	1 cut(s)	920
BseBI	CCWGG	4 cut(s)	1014, 1700, 1841, 2156
BseDI	CCNNGG	1 cut(s)	117
BseJI	GATNNNNATC	1 cut(s)	920
BseLI	CCNNNNNNNGG	6 cut(s)	51, 68, 591, 1603, 2479, 2981
BseMI	GCAATG	1 cut(s)	1618
BseMII	CTCAG	6 cut(s)	119, 196, 265, 487, 491, 2913
BseNI	ACTGG	7 cut(s)	1353, 1467, 1544, 2133, 2268, 2593, 2600
BseRI	GAGGAG	1 cut(s)	145
BseSI	GKGCMC	3 cut(s)	912, 1994, 2131
BseXI	GCAGC	4 cut(s)	779, 1107, 1696, 2683
BseYI	CCCAGC	1 cut(s)	2987
BsgI	GTGCAG	1 cut(s)	2685
Bsh1236I	CGCG	1 cut(s)	204
BshFI	GGCC	4 cut(s)	239, 365, 461, 825
BshNI	GGYRCC	2 cut(s)	909, 2128
BsiHKAI	GWGCWC	1 cut(s)	1908
BsiHKCI	CYCGRG	2 cut(s)	221, 1509
BsiSI	CCGG	4 cut(s)	45, 585, 1562, 2480
BslFI	GGGAC	5 cut(s)	442, 521, 538, 1579, 2426
BslI	CCNNNNNNNGG	6 cut(s)	51, 68, 591, 1603, 2479, 2981
BsmAI	GTCTC	1 cut(s)	1512
BsmFI	GGGAC	5 cut(s)	442, 521, 538, 1579, 2426
BsmI	GAATGC	3 cut(s)	941, 1166, 2631
BsnI	GGCC	4 cut(s)	239, 365, 461, 825
BsoBI	CYCGRG	2 cut(s)	221, 1509
Bsp1286I	GDGCHC	6 cut(s)	912, 1290, 1908, 1994, 2131, 2205
Bsp1407I	TGTACA	2 cut(s)	1811, 2107
Bsp1720I	GCTNAGC	1 cut(s)	995
BspACI	CCGC	9 cut(s)	15, 62, 69, 202, 486, 777, 780, 1123, 2354
BspANI	GGCC	4 cut(s)	239, 365, 461, 825
BspCNI	CTCAG	6 cut(s)	120, 195, 264, 486, 492, 2914
BspFNI	CGCG	1 cut(s)	204
BspHI	TCATGA	3 cut(s)	334, 1624, 2377
BspLI	GGNNCC	7 cut(s)	364, 460, 911, 976, 2130, 2454, 2955
BspMAI	CTGCAG	2 cut(s)	1714, 1825
BspMI	ACCTGC	1 cut(s)	1814
BspOI	GCTAGC	2 cut(s)	1340, 2255
BspPI	GGATC	6 cut(s)	155, 969, 982, 2490, 2577, 2733
BspQI	GCTCTTC	1 cut(s)	72
BspT107I	GGYRCC	2 cut(s)	909, 2128
BsrBI	CCGCTC	1 cut(s)	488
BsrDI	GCAATG	1 cut(s)	1618
BsrFI	RCCGGY	1 cut(s)	44
BsrGI	TGTACA	2 cut(s)	1811, 2107
BsrI	ACTGG	7 cut(s)	1353, 1467, 1544, 2133, 2268, 2593, 2600
BssAI	RCCGGY	1 cut(s)	44
BssECI	CCNNGG	1 cut(s)	117
BssNI	GRCGYC	2 cut(s)	441, 642
BssSI	CACGAG	1 cut(s)	1874
Bst2BI	CACGAG	1 cut(s)	1874
Bst2UI	CCWGG	4 cut(s)	1014, 1700, 1841, 2156
Bst4CI	ACNGT	7 cut(s)	118, 391, 904, 1237, 2020, 2339, 2886
Bst6I	CTCTTC	3 cut(s)	72, 1531, 1632
BstACI	GRCGYC	2 cut(s)	441, 642
BstAPI	GCANNNNNTGC	1 cut(s)	1688
BstAUI	TGTACA	2 cut(s)	1811, 2107
BstC8I	GCNNGC	4 cut(s)	858, 1338, 2253, 3040
BstDSI	CCRYGG	1 cut(s)	117
BstENI	CCTNNNNNAGG	1 cut(s)	2979
BstFNI	CGCG	1 cut(s)	204
BstH2I	RGCGCY	1 cut(s)	2501
BstHHI	GCGC	3 cut(s)	84, 740, 2500
BstMAI	GTCTC	1 cut(s)	1512
BstMWI	GCNNNNNNNGC	5 cut(s)	789, 991, 1383, 1688, 2298
BstNI	CCWGG	4 cut(s)	1014, 1700, 1841, 2156
BstNSI	RCATGY	3 cut(s)	895, 2108, 2612
BstSCI	CCNGG	5 cut(s)	1012, 1698, 1839, 2154, 2478
BstSFI	CTRYAG	3 cut(s)	1000, 1710, 1821
BstSLI	GKGCMC	3 cut(s)	912, 1994, 2131
BstUI	CGCG	1 cut(s)	204
BstV1I	GCAGC	4 cut(s)	779, 1107, 1696, 2683
BstV2I	GAAGAC	4 cut(s)	1842, 2832, 2855, 2988
BstX2I	RGATCY	6 cut(s)	124, 217, 974, 1629, 2482, 2582
BstYI	RGATCY	6 cut(s)	124, 217, 974, 1629, 2482, 2582
BsuRI	GGCC	4 cut(s)	239, 365, 461, 825
BtgI	CCRYGG	1 cut(s)	117
BtgZI	GCGATG	2 cut(s)	594, 1032
BtsI	GCAGTG	7 cut(s)	25, 55, 553, 1077, 1371, 1719, 2286
BveI	ACCTGC	1 cut(s)	1814
Cac8I	GCNNGC	4 cut(s)	858, 1338, 2253, 3040
CciI	TCATGA	3 cut(s)	334, 1624, 2377
CfoI	GCGC	3 cut(s)	84, 740, 2500
Cfr10I	RCCGGY	1 cut(s)	44
Cfr13I	GGNCC	5 cut(s)	237, 363, 459, 2144, 2953
CseI	GACGC	2 cut(s)	430, 631
Csp6I	GTAC	3 cut(s)	1812, 2016, 2108
CviQI	GTAC	3 cut(s)	1812, 2016, 2108
DraI	TTTAAA	1 cut(s)	712
EaeI	YGGCCR	1 cut(s)	823
Eam1104I	CTCTTC	3 cut(s)	72, 1531, 1632
EarI	CTCTTC	3 cut(s)	72, 1531, 1632
EciI	GGCGGA	1 cut(s)	51
Eco24I	GRGCYC	2 cut(s)	1290, 2205
Eco32I	GATATC	1 cut(s)	3016
Eco47I	GGWCC	2 cut(s)	2144, 2953
Eco57I	CTGAAG	4 cut(s)	1874, 1932, 2463, 2982
Eco88I	CYCGRG	2 cut(s)	221, 1509
EcoNI	CCTNNNNNAGG	1 cut(s)	2979
EcoO109I	RGGNCCY	1 cut(s)	2953
EcoRI	GAATTC	1 cut(s)	57
EcoRII	CCWGG	4 cut(s)	1012, 1698, 1839, 2154
EcoRV	GATATC	1 cut(s)	3016
EcoT22I	ATGCAT	3 cut(s)	941, 2059, 2908
EcoT38I	GRGCYC	2 cut(s)	1290, 2205
FalI	AAGNNNNNCTT	6 cut(s)	2104, 2136, 2382, 2414, 2484, 2516
FaqI	GGGAC	5 cut(s)	442, 521, 538, 1579, 2426
FauI	CCCGC	1 cut(s)	1116
FauNDI	CATATG	1 cut(s)	1963
Fnu4HI	GCNGC	7 cut(s)	16, 778, 781, 793, 1121, 1710, 2697
FriOI	GRGCYC	2 cut(s)	1290, 2205
Fsp4HI	GCNGC	7 cut(s)	16, 778, 781, 793, 1121, 1710, 2697
FspBI	CTAG	7 cut(s)	1163, 1215, 1337, 2072, 2252, 2859, 2969
GlaI	GCGC	3 cut(s)	83, 739, 2499
GluI	GCNGC	7 cut(s)	16, 778, 781, 793, 1121, 1710, 2697
GsaI	CCCAGC	1 cut(s)	2991
GsuI	CTGGAG	2 cut(s)	1527, 1862
HaeII	RGCGCY	1 cut(s)	2501
HaeIII	GGCC	4 cut(s)	239, 365, 461, 825
HapII	CCGG	4 cut(s)	45, 585, 1562, 2480
HgaI	GACGC	2 cut(s)	430, 631
HhaI	GCGC	3 cut(s)	84, 740, 2500
Hin1I	GRCGYC	2 cut(s)	441, 642
Hin6I	GCGC	3 cut(s)	82, 738, 2498
HinP1I	GCGC	3 cut(s)	82, 738, 2498
HincII	GTYRAC	4 cut(s)	445, 646, 2332, 2898
HindII	GTYRAC	4 cut(s)	445, 646, 2332, 2898
HindIII	AAGCTT	6 cut(s)	406, 724, 992, 1375, 2290, 2391
HpaII	CCGG	4 cut(s)	45, 585, 1562, 2480
HphI	GGTGA	6 cut(s)	238, 364, 460, 565, 1445, 3013
Hpy166II	GTNNAC	6 cut(s)	445, 646, 874, 2332, 2898, 3029
Hpy8I	GTNNAC	6 cut(s)	445, 646, 874, 2332, 2898, 3029
HpyCH4III	ACNGT	7 cut(s)	118, 391, 904, 1237, 2020, 2339, 2886
HpyF10VI	GCNNNNNNNGC	5 cut(s)	789, 991, 1383, 1688, 2298
Hsp92I	GRCGYC	2 cut(s)	441, 642
HspAI	GCGC	3 cut(s)	82, 738, 2498
LguI	GCTCTTC	1 cut(s)	72
LmnI	GCTCC	4 cut(s)	493, 687, 1200, 1546
Lsp1109I	GCAGC	4 cut(s)	779, 1107, 1696, 2683
LweI	GCATC	9 cut(s)	323, 669, 843, 994, 1112, 1678, 1696, 2869, 3011
MaeI	CTAG	7 cut(s)	1163, 1215, 1337, 2072, 2252, 2859, 2969
MaeIII	GTNAC	6 cut(s)	20, 887, 1075, 2591, 2708, 2869
MbiI	CCGCTC	1 cut(s)	488
MflI	RGATCY	6 cut(s)	124, 217, 974, 1629, 2482, 2582
MhlI	GDGCHC	6 cut(s)	912, 1290, 1908, 1994, 2131, 2205
MlyI	GAGTC	5 cut(s)	110, 1003, 1514, 1601, 2866
MmeI	TCCRAC	2 cut(s)	2340, 2879
Mph1103I	ATGCAT	3 cut(s)	941, 2059, 2908
MroXI	GAANNNNTTC	2 cut(s)	210, 2437
MslI	CAYNNNNRTG	4 cut(s)	944, 1171, 1406, 2321
MspA1I	CMGCKG	3 cut(s)	792, 860, 2356
MspI	CCGG	4 cut(s)	45, 585, 1562, 2480
MspR9I	CCNGG	5 cut(s)	1014, 1700, 1841, 2156, 2480
Mva1269I	GAATGC	3 cut(s)	941, 1166, 2631
MvaI	CCWGG	4 cut(s)	1014, 1700, 1841, 2156
MvnI	CGCG	1 cut(s)	204
MwoI	GCNNNNNNNGC	5 cut(s)	789, 991, 1383, 1688, 2298
NciI	CCSGG	1 cut(s)	2480
NdeI	CATATG	1 cut(s)	1963
NheI	GCTAGC	2 cut(s)	1336, 2251
NlaIV	GGNNCC	7 cut(s)	364, 460, 911, 976, 2130, 2454, 2955
NmuCI	GTSAC	4 cut(s)	20, 1075, 2708, 2869
NsiI	ATGCAT	3 cut(s)	941, 2059, 2908
NspI	RCATGY	3 cut(s)	895, 2108, 2612
PaeR7I	CTCGAG	1 cut(s)	1509
PagI	TCATGA	3 cut(s)	334, 1624, 2377
PciI	ACATGT	1 cut(s)	891
PciSI	GCTCTTC	1 cut(s)	72
PctI	GAATGC	3 cut(s)	941, 1166, 2631
PdmI	GAANNNNTTC	2 cut(s)	210, 2437
PflMI	CCANNNNNTGG	1 cut(s)	1603
PfoI	TCCNGGA	1 cut(s)	2478
PkrI	GCNGC	7 cut(s)	17, 779, 782, 794, 1122, 1711, 2698
PleI	GAGTC	5 cut(s)	109, 1003, 1513, 1600, 2866
PpsI	GAGTC	5 cut(s)	109, 1003, 1513, 1600, 2866
PpuMI	RGGWCCY	1 cut(s)	2953
PscI	ACATGT	1 cut(s)	891
PshBI	ATTAAT	1 cut(s)	1422
Psp5II	RGGWCCY	1 cut(s)	2953
Psp6I	CCWGG	4 cut(s)	1012, 1698, 1839, 2154
PspFI	CCCAGC	1 cut(s)	2987
PspGI	CCWGG	4 cut(s)	1012, 1698, 1839, 2154
PspN4I	GGNNCC	7 cut(s)	364, 460, 911, 976, 2130, 2454, 2955
PspPI	GGNCC	5 cut(s)	237, 363, 459, 2144, 2953
PspPPI	RGGWCCY	1 cut(s)	2953
PsrI	GAACNNNNNNTAC	2 cut(s)	2828, 2860
PstI	CTGCAG	2 cut(s)	1714, 1825
PsuI	RGATCY	6 cut(s)	124, 217, 974, 1629, 2482, 2582
PvuII	CAGCTG	2 cut(s)	792, 860
RsaI	GTAC	3 cut(s)	1813, 2017, 2109
RsaNI	GTAC	3 cut(s)	1812, 2016, 2108
RseI	CAYNNNNRTG	4 cut(s)	944, 1171, 1406, 2321
SapI	GCTCTTC	1 cut(s)	72
SatI	GCNGC	7 cut(s)	16, 778, 781, 793, 1121, 1710, 2697
Sau96I	GGNCC	5 cut(s)	237, 363, 459, 2144, 2953
SchI	GAGTC	5 cut(s)	110, 1003, 1514, 1601, 2866
ScrFI	CCNGG	5 cut(s)	1014, 1700, 1841, 2156, 2480
SduI	GDGCHC	6 cut(s)	912, 1290, 1908, 1994, 2131, 2205
SfaNI	GCATC	9 cut(s)	323, 669, 843, 994, 1112, 1678, 1696, 2869, 3011
SfcI	CTRYAG	3 cut(s)	1000, 1710, 1821
Sfr274I	CTCGAG	1 cut(s)	1509
SinI	GGWCC	2 cut(s)	2144, 2953
SlaI	CTCGAG	1 cut(s)	1509
SmiMI	CAYNNNNRTG	4 cut(s)	944, 1171, 1406, 2321
SmlI	CTYRAG	2 cut(s)	1509, 2578
SmoI	CTYRAG	2 cut(s)	1509, 2578
SpeI	ACTAGT	2 cut(s)	1214, 2858
SsiI	CCGC	9 cut(s)	15, 62, 69, 202, 486, 777, 780, 1123, 2354
SspMI	CTAG	7 cut(s)	1163, 1215, 1337, 2072, 2252, 2859, 2969
StyD4I	CCNGG	5 cut(s)	1012, 1698, 1839, 2154, 2478
TaaI	ACNGT	7 cut(s)	118, 391, 904, 1237, 2020, 2339, 2886
TaqI	TCGA	9 cut(s)	99, 159, 214, 285, 411, 507, 1026, 1489, 1510
TatI	WGTACW	3 cut(s)	1811, 2015, 2107
TauI	GCSGC	3 cut(s)	18, 780, 783
TseFI	GTSAC	4 cut(s)	20, 1075, 2708, 2869
TseI	GCWGC	4 cut(s)	792, 1120, 1709, 2696
Tsp45I	GTSAC	4 cut(s)	20, 1075, 2708, 2869
Van91I	CCANNNNNTGG	1 cut(s)	1603
VpaK11BI	GGWCC	2 cut(s)	2144, 2953
VspI	ATTAAT	1 cut(s)	1422
XagI	CCTNNNNNAGG	1 cut(s)	2979
XapI	RAATTY	5 cut(s)	57, 847, 2349, 2734, 2915
XceI	RCATGY	3 cut(s)	895, 2108, 2612
XhoI	CTCGAG	1 cut(s)	1509
XmnI	GAANNNNTTC	2 cut(s)	210, 2437
XspI	CTAG	7 cut(s)	1163, 1215, 1337, 2072, 2252, 2859, 2969
Zsp2I	ATGCAT	3 cut(s)	941, 2059, 2908

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.