Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0002016

Physical Location & Seq

Genomic Coordinates Reverse (-)

1277317 .. 1283305

Gene Structure 5989 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG020100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGAAGGTGGTGGCTTTAGTAAGCGGCGGCAAGGACAGCTGCTATGCCATGATGAAGTGCCTCCAATACGGCCACCAGATTGTTGCTGTGGCAAATTTGATGCCAGCTGATGATTCGGTGGACGAGCTTGATAGTTACATGTATCAAACTGTTGGGCACCAGATAGTTATCAGCTATGCAGAATGCATGGGAGTGCCATTGTTCAGAAGGCGAATACAAGGATCCACAAGGCATCAGAAGCTTAGCTATAGAATGACTCCTGGCGATGAAGTCGAAGATATGTTTATTTTGTTAAATGAAGTGAAACGACAGATTCCTTCTGTCACTGCTGTATCTTCTGGTGCTATTGCATCAGACTACCAAAGGCTGCGGGTGGAAAGTGTCTGTTCAAGGTTAGGTCTTGTTTCTCTTGCATACTTGTGGAAACAAGATCAGTCTTTGCTCCTTCAAGAAATGATAACTAGTGGGATTGTGGCGATTACAGTGAAGGTTGCTGCCATGGGGTTGGACCCCTCAAAGCACTTGGGCAAAGAAATGTCAGTGTTGCAGCCGTATCTGCATAAGTTGAAAGAGTTATATGGTATTAATGTATGTGGTGAAGGAGGGGAATATGAAACGTTAACACTGGATTGCCCTCTCTTTGTTAATGCTCGAATCATGCTTGATGAGTCTCGAGTAGTAATGCACTCTTCTGATTCCATAGCTCCAGTTGGGGTGCTTCATCCGGTGGCTTTTCATTTGCAAAGTAAGGCAGAGTCCCATTCTTTGGAGAGCAATGACAATGCTCATGAGATCTGTGAAGAGAGGGTGGGTTCTCTATTTGAAGTGCAAGGAGACACACAAGCATGTGATGCCATTTGCCAGGCTGATGCTGCAGTGGATGTCTTAGTTAAACTTCCTGAACATAAACTTCACATTTCAAGAACACAAAAGGACGATACATTTTCTATTTGTTGCTGGTTGCAAGATTCTTGTACAACTTCTGCAGGTTTGCAAGAAGACCTGGAGGCTGTTCTGAAGAAAATTGAATCACTACTCGTGGAATATGGTTTTGGTTGGGAATATGTGCTCTACATTCATCTTTATATTGCTGATATGGGTGGGTTTTCTTCAGCAAATGATACATATGTGAGATATATAACCCAGGAGAAGTGCCCGTTTGGTGTTCCATCTCGCAGTACAGTTGAACTACCTTTGTTGCAAGTGGGTTTAGGTAATGCATACATGGAAGTTCTAGTTGCTAATGACCACACCAAAAGAGTTCTGCATGTACAAAGTATATCTTGTTGGGCACCCAGTTGTATTGGACCTTATAGCCAGGCAACTTTGCATAAGGAGATACTTCACATGGCTGGACAATTAGGGCTCAACCCTCCCACAATGACTTTATGTGATGGAGGTGTCATGGATGAGCTAGCAAAAGCACTGGACAATAGTGAAGCAGTGGCAAAAAGCTTTAACTGCTCAATATCTAATTCCACTATTATGTTTGTCAACTACTGTTCAACTAAAATTCCGCTGTCGGATAGATTAAATCTTCATGACAAGCATAAAGCTTTCCTTAAACAAACGAGGGACTTCAATTCGGATAAAGGAAGCAATTCTGAAGCATTGGAACCCATTTTCTTATATGTCCTTCTCCCAGATCTGCCAAAAGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Diphthami_syn_2 Pkinase Ribonuc_L-PSP

Protein Analysis

553

Amino Acids

61.12

Weight (kDa)

5.39

Isoelectric Point (pI)

49.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Diphthami_syn_2	PF01902	1 - 230	3.2e-38	Diphthamide synthase
Ribonuc_L-PSP	PF01042	328 - 401	1.6e-07	Endoribonuclease L-PSP
Ribonuc_L-PSP	PF01042	431 - 492	3.8e-07	Endoribonuclease L-PSP

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002016)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04480
fragaria_vesca	FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810 FvH4_6g01810
malus_domestica	MD04G1230700.v1.1
prunus_persica	Prupe.6G350500_v2.0.a1
pyrus_communis	pycom04g20440
rosa_chinensis	RchiOBHm_Chr2g0149091 RchiOBHm_Chr3g0449521 RchiOBHm_Chr6g0277751
rosa_laevigata	RLG00000025818 RLG00000036278
rosa_multiflora	Rmu_co8274617.1_g000001 Rmu_sc0000430.1_g000014
rosa_roxburghii	Rroxscaffold_6G00427480 Rroxscaffold_7G00175750
rosa_rugosa	Rorug02G0622400 Rorug02G0622500 Rorug02G0622600
rosa_samantha	Rh2AG410700 Rh2AG659700 Rh2BG670500 Rh2BG670600 Rh2CG396800 Rh3AG020100 Rh3BG020200 Rh3CG018900 Rh3DG020100
rosa_wichuraiana	Rw2G033330 Rw2G033560 Rw3G001600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	977
AccB1I	GGYRCC	2 cut(s)	156, 1291
AccB7I	CCANNNNNTGG	1 cut(s)	766
AciI	CCGC	4 cut(s)	24, 27, 370, 1517
AclI	AACGTT	1 cut(s)	617
AclWI	GGATC	2 cut(s)	216, 229
AcoI	YGGCCR	1 cut(s)	70
AcsI	RAATTY	2 cut(s)	94, 1512
AcuI	CTGAAG	3 cut(s)	1037, 1095, 1626
AfaI	GTAC	3 cut(s)	976, 1180, 1272
AfiI	CCNNNNNNNGG	1 cut(s)	766
AflIII	ACRYGT	1 cut(s)	138
AgsI	TTSAA	9 cut(s)	390, 449, 568, 824, 921, 1028, 1187, 1506, 1582
AhlI	ACTAGT	1 cut(s)	461
AjnI	CCWGG	5 cut(s)	259, 861, 1002, 1143, 1317
AjuI	GAANNNNNNNTTGG	2 cut(s)	1035, 1067
Alw21I	GWGCWC	1 cut(s)	1071
Alw26I	GTCTC	2 cut(s)	675, 828
AlwI	GGATC	2 cut(s)	216, 229
Ama87I	CYCGRG	1 cut(s)	672
AoxI	GGCC	1 cut(s)	70
ApeKI	GCWGC	5 cut(s)	39, 367, 494, 547, 872
ApoI	RAATTY	2 cut(s)	94, 1512
AseI	ATTAAT	1 cut(s)	585
Asp700I	GAANNNNTTC	1 cut(s)	1600
AspS9I	GGNCC	2 cut(s)	508, 1307
AsuHPI	GGTGA	1 cut(s)	608
AsuNHI	GCTAGC	1 cut(s)	1414
AvaI	CYCGRG	1 cut(s)	672
AvaII	GGWCC	2 cut(s)	508, 1307
BaeGI	GKGCMC	3 cut(s)	159, 1157, 1294
BaeI	ACNNNNGTAYC	4 cut(s)	315, 348, 1113, 1146
BamHI	GGATCC	1 cut(s)	221
BanI	GGYRCC	2 cut(s)	156, 1291
BanII	GRGCYC	1 cut(s)	1368
BauI	CACGAG	1 cut(s)	1037
BbsI	GAAGAC	1 cut(s)	1005
Bbv12I	GWGCWC	1 cut(s)	1071
BbvI	GCAGC	5 cut(s)	26, 354, 481, 559, 859
BccI	CCATC	2 cut(s)	1177, 1388
BceAI	ACGGC	2 cut(s)	85, 535
BciT130I	CCWGG	5 cut(s)	261, 863, 1004, 1145, 1319
BcoDI	GTCTC	2 cut(s)	675, 828
BcuI	ACTAGT	1 cut(s)	461
BfaI	CTAG	3 cut(s)	462, 1235, 1415
BfmI	CTRYAG	3 cut(s)	247, 873, 984
BfuAI	ACCTGC	1 cut(s)	977
BglII	AGATCT	2 cut(s)	792, 1645
BisI	GCNGC	7 cut(s)	25, 28, 40, 368, 495, 548, 873
BlpI	GCTNAGC	1 cut(s)	242
BlsI	GCNGC	7 cut(s)	26, 29, 41, 369, 496, 549, 874
Bme1390I	CCNGG	5 cut(s)	261, 863, 1004, 1145, 1319
Bme18I	GGWCC	2 cut(s)	508, 1307
BmeT110I	CYCGRG	1 cut(s)	672
BmgT120I	GGNCC	2 cut(s)	508, 1307
BmiI	GGNNCC	5 cut(s)	158, 223, 510, 1293, 1617
BmrFI	CCNGG	5 cut(s)	261, 863, 1004, 1145, 1319
BmrI	ACTGGG	1 cut(s)	1290
BmsI	GCATC	5 cut(s)	90, 241, 359, 841, 859
BmtI	GCTAGC	1 cut(s)	1418
BmuI	ACTGGG	1 cut(s)	1290
BpiI	GAAGAC	1 cut(s)	1005
BpmI	CTGGAG	2 cut(s)	690, 1025
Bpu1102I	GCTNAGC	1 cut(s)	242
BsaBI	GATNNNNATC	1 cut(s)	167
BsaJI	CCNNGG	2 cut(s)	498, 1143
BsaWI	WCCGGW	1 cut(s)	724
Bsc4I	CCNNNNNNNGG	1 cut(s)	766
Bse1I	ACTGG	4 cut(s)	630, 707, 1296, 1431
Bse3DI	GCAATG	1 cut(s)	781
Bse8I	GATNNNNATC	1 cut(s)	167
BseBI	CCWGG	5 cut(s)	261, 863, 1004, 1145, 1319
BseDI	CCNNGG	2 cut(s)	498, 1143
BseGI	GGATG	3 cut(s)	721, 886, 1414
BseJI	GATNNNNATC	1 cut(s)	167
BseLI	CCNNNNNNNGG	1 cut(s)	766
BseMI	GCAATG	1 cut(s)	781
BseNI	ACTGG	4 cut(s)	630, 707, 1296, 1431
BseSI	GKGCMC	3 cut(s)	159, 1157, 1294
BseXI	GCAGC	5 cut(s)	26, 354, 481, 559, 859
BshFI	GGCC	1 cut(s)	72
BshNI	GGYRCC	2 cut(s)	156, 1291
BsiHKAI	GWGCWC	1 cut(s)	1071
BsiHKCI	CYCGRG	1 cut(s)	672
BsiSI	CCGG	1 cut(s)	725
BslFI	GGGAC	2 cut(s)	742, 1589
BslI	CCNNNNNNNGG	1 cut(s)	766
BsmAI	GTCTC	2 cut(s)	675, 828
BsmFI	GGGAC	2 cut(s)	742, 1589
BsmI	GAATGC	1 cut(s)	188
BsnI	GGCC	1 cut(s)	72
BsoBI	CYCGRG	1 cut(s)	672
Bsp1286I	GDGCHC	5 cut(s)	159, 1071, 1157, 1294, 1368
Bsp1407I	TGTACA	2 cut(s)	974, 1270
Bsp143I	GATC	4 cut(s)	221, 430, 792, 1645
Bsp1720I	GCTNAGC	1 cut(s)	242
Bsp19I	CCATGG	1 cut(s)	498
BspACI	CCGC	4 cut(s)	24, 27, 370, 1517
BspANI	GGCC	1 cut(s)	72
BspHI	TCATGA	2 cut(s)	787, 1540
BspLI	GGNNCC	5 cut(s)	158, 223, 510, 1293, 1617
BspMAI	CTGCAG	2 cut(s)	877, 988
BspMI	ACCTGC	1 cut(s)	977
BspOI	GCTAGC	1 cut(s)	1418
BspPI	GGATC	2 cut(s)	216, 229
BspT107I	GGYRCC	2 cut(s)	156, 1291
BsrDI	GCAATG	1 cut(s)	781
BsrGI	TGTACA	2 cut(s)	974, 1270
BsrI	ACTGG	4 cut(s)	630, 707, 1296, 1431
BssECI	CCNNGG	2 cut(s)	498, 1143
BssMI	GATC	4 cut(s)	221, 430, 792, 1645
BssSI	CACGAG	1 cut(s)	1037
BssT1I	CCWWGG	1 cut(s)	498
Bst2BI	CACGAG	1 cut(s)	1037
Bst2UI	CCWGG	5 cut(s)	261, 863, 1004, 1145, 1319
Bst4CI	ACNGT	4 cut(s)	151, 484, 1183, 1502
Bst6I	CTCTTC	2 cut(s)	694, 795
BstAPI	GCANNNNNTGC	1 cut(s)	851
BstAUI	TGTACA	2 cut(s)	974, 1270
BstC8I	GCNNGC	2 cut(s)	105, 1416
BstDEI	CTNAG	2 cut(s)	242, 886
BstDSI	CCRYGG	1 cut(s)	498
BstF5I	GGATG	3 cut(s)	721, 886, 1414
BstKTI	GATC	4 cut(s)	224, 433, 795, 1648
BstMAI	GTCTC	2 cut(s)	675, 828
BstMBI	GATC	4 cut(s)	221, 430, 792, 1645
BstMWI	GCNNNNNNNGC	6 cut(s)	36, 238, 556, 851, 872, 1461
BstNI	CCWGG	5 cut(s)	261, 863, 1004, 1145, 1319
BstNSI	RCATGY	3 cut(s)	142, 849, 1271
BstSCI	CCNGG	5 cut(s)	259, 861, 1002, 1143, 1317
BstSFI	CTRYAG	3 cut(s)	247, 873, 984
BstSLI	GKGCMC	3 cut(s)	159, 1157, 1294
BstV1I	GCAGC	5 cut(s)	26, 354, 481, 559, 859
BstV2I	GAAGAC	1 cut(s)	1005
BstX2I	RGATCY	3 cut(s)	221, 792, 1645
BstXI	CCANNNNNNTGG	1 cut(s)	505
BstYI	RGATCY	3 cut(s)	221, 792, 1645
BsuRI	GGCC	1 cut(s)	72
BtgI	CCRYGG	1 cut(s)	498
BtgZI	GCGATG	1 cut(s)	279
BtsCI	GGATG	3 cut(s)	721, 886, 1414
BtsI	GCAGTG	3 cut(s)	324, 882, 1449
BtsIMutI	CAGTG	7 cut(s)	324, 489, 546, 623, 882, 1424, 1449
BveI	ACCTGC	1 cut(s)	977
Cac8I	GCNNGC	2 cut(s)	105, 1416
CciI	TCATGA	2 cut(s)	787, 1540
Cfr13I	GGNCC	2 cut(s)	508, 1307
Csp6I	GTAC	3 cut(s)	975, 1179, 1271
CviQI	GTAC	3 cut(s)	975, 1179, 1271
DdeI	CTNAG	2 cut(s)	242, 886
DpnI	GATC	4 cut(s)	223, 432, 794, 1647
DpnII	GATC	4 cut(s)	221, 430, 792, 1645
EaeI	YGGCCR	1 cut(s)	70
Eam1104I	CTCTTC	2 cut(s)	694, 795
EarI	CTCTTC	2 cut(s)	694, 795
Eco130I	CCWWGG	1 cut(s)	498
Eco24I	GRGCYC	1 cut(s)	1368
Eco47I	GGWCC	2 cut(s)	508, 1307
Eco57I	CTGAAG	3 cut(s)	1037, 1095, 1626
Eco88I	CYCGRG	1 cut(s)	672
EcoRII	CCWGG	5 cut(s)	259, 861, 1002, 1143, 1317
EcoT14I	CCWWGG	1 cut(s)	498
EcoT22I	ATGCAT	2 cut(s)	188, 1222
EcoT38I	GRGCYC	1 cut(s)	1368
ErhI	CCWWGG	1 cut(s)	498
FalI	AAGNNNNNCTT	4 cut(s)	1267, 1299, 1545, 1577
FaqI	GGGAC	2 cut(s)	742, 1589
FauI	CCCGC	1 cut(s)	363
FauNDI	CATATG	1 cut(s)	1126
Fnu4HI	GCNGC	7 cut(s)	25, 28, 40, 368, 495, 548, 873
FokI	GGATG	3 cut(s)	708, 893, 1421
FriOI	GRGCYC	1 cut(s)	1368
Fsp4HI	GCNGC	7 cut(s)	25, 28, 40, 368, 495, 548, 873
FspBI	CTAG	3 cut(s)	462, 1235, 1415
GluI	GCNGC	7 cut(s)	25, 28, 40, 368, 495, 548, 873
GsuI	CTGGAG	2 cut(s)	690, 1025
HaeIII	GGCC	1 cut(s)	72
HapII	CCGG	1 cut(s)	725
HincII	GTYRAC	2 cut(s)	621, 1495
HindII	GTYRAC	2 cut(s)	621, 1495
HindIII	AAGCTT	3 cut(s)	239, 1453, 1554
HinfI	GANTC	9 cut(s)	113, 256, 313, 654, 668, 695, 755, 968, 1028
HpaI	GTTAAC	1 cut(s)	621
HpaII	CCGG	1 cut(s)	725
HphI	GGTGA	1 cut(s)	608
Hpy166II	GTNNAC	3 cut(s)	121, 621, 1495
Hpy188I	TCNGA	8 cut(s)	206, 237, 355, 694, 1017, 1525, 1588, 1606
Hpy188III	TCNNGA	6 cut(s)	449, 672, 788, 899, 921, 1541
Hpy8I	GTNNAC	3 cut(s)	121, 621, 1495
HpyAV	CCTTC	6 cut(s)	201, 327, 455, 481, 593, 1646
HpyCH4III	ACNGT	4 cut(s)	151, 484, 1183, 1502
HpyCH4IV	ACGT	1 cut(s)	617
HpyF10VI	GCNNNNNNNGC	6 cut(s)	36, 238, 556, 851, 872, 1461
HpyF3I	CTNAG	2 cut(s)	242, 886
HpySE526I	ACGT	1 cut(s)	617
KspAI	GTTAAC	1 cut(s)	621
Kzo9I	GATC	4 cut(s)	221, 430, 792, 1645
LmnI	GCTCC	2 cut(s)	447, 709
Lsp1109I	GCAGC	5 cut(s)	26, 354, 481, 559, 859
LweI	GCATC	5 cut(s)	90, 241, 359, 841, 859
MaeI	CTAG	3 cut(s)	462, 1235, 1415
MaeII	ACGT	1 cut(s)	617
MaeIII	GTNAC	2 cut(s)	134, 322
MalI	GATC	4 cut(s)	223, 432, 794, 1647
MboI	GATC	4 cut(s)	221, 430, 792, 1645
MboII	GAAGA	8 cut(s)	287, 327, 681, 812, 1010, 1030, 1101, 1529
MflI	RGATCY	3 cut(s)	221, 792, 1645
MhlI	GDGCHC	5 cut(s)	159, 1071, 1157, 1294, 1368
MluCI	AATT	7 cut(s)	94, 1023, 1358, 1474, 1512, 1582, 1600
MlyI	GAGTC	3 cut(s)	250, 677, 764
MmeI	TCCRAC	2 cut(s)	486, 1503
MnlI	CCTC	9 cut(s)	71, 523, 596, 645, 798, 1000, 1383, 1391, 1566
Mph1103I	ATGCAT	2 cut(s)	188, 1222
MroXI	GAANNNNTTC	1 cut(s)	1600
MseI	TTAA	8 cut(s)	293, 585, 620, 645, 891, 1458, 1532, 1563
MslI	CAYNNNNRTG	4 cut(s)	191, 418, 844, 1484
MspA1I	CMGCKG	3 cut(s)	39, 107, 1519
MspI	CCGG	1 cut(s)	725
MspR9I	CCNGG	5 cut(s)	261, 863, 1004, 1145, 1319
Mva1269I	GAATGC	1 cut(s)	188
MvaI	CCWGG	5 cut(s)	261, 863, 1004, 1145, 1319
MwoI	GCNNNNNNNGC	6 cut(s)	36, 238, 556, 851, 872, 1461
NcoI	CCATGG	1 cut(s)	498
NdeI	CATATG	1 cut(s)	1126
NdeII	GATC	4 cut(s)	221, 430, 792, 1645
NheI	GCTAGC	1 cut(s)	1414
NlaIV	GGNNCC	5 cut(s)	158, 223, 510, 1293, 1617
NmuCI	GTSAC	1 cut(s)	322
NsiI	ATGCAT	2 cut(s)	188, 1222
NspI	RCATGY	3 cut(s)	142, 849, 1271
PaeR7I	CTCGAG	1 cut(s)	672
PagI	TCATGA	2 cut(s)	787, 1540
PciI	ACATGT	1 cut(s)	138
PctI	GAATGC	1 cut(s)	188
PdmI	GAANNNNTTC	1 cut(s)	1600
PfeI	GAWTC	6 cut(s)	113, 313, 654, 695, 968, 1028
PflMI	CCANNNNNTGG	1 cut(s)	766
PkrI	GCNGC	7 cut(s)	26, 29, 41, 369, 496, 549, 874
PleI	GAGTC	3 cut(s)	250, 676, 763
PpsI	GAGTC	3 cut(s)	250, 676, 763
PscI	ACATGT	1 cut(s)	138
PshBI	ATTAAT	1 cut(s)	585
Psp1406I	AACGTT	1 cut(s)	617
Psp6I	CCWGG	5 cut(s)	259, 861, 1002, 1143, 1317
PspGI	CCWGG	5 cut(s)	259, 861, 1002, 1143, 1317
PspN4I	GGNNCC	5 cut(s)	158, 223, 510, 1293, 1617
PspPI	GGNCC	2 cut(s)	508, 1307
PstI	CTGCAG	2 cut(s)	877, 988
PsuI	RGATCY	3 cut(s)	221, 792, 1645
PvuII	CAGCTG	2 cut(s)	39, 107
RsaI	GTAC	3 cut(s)	976, 1180, 1272
RsaNI	GTAC	3 cut(s)	975, 1179, 1271
RseI	CAYNNNNRTG	4 cut(s)	191, 418, 844, 1484
SaqAI	TTAA	8 cut(s)	293, 585, 620, 645, 891, 1458, 1532, 1563
SatI	GCNGC	7 cut(s)	25, 28, 40, 368, 495, 548, 873
Sau3AI	GATC	4 cut(s)	221, 430, 792, 1645
Sau96I	GGNCC	2 cut(s)	508, 1307
SchI	GAGTC	3 cut(s)	250, 677, 764
ScrFI	CCNGG	5 cut(s)	261, 863, 1004, 1145, 1319
SduI	GDGCHC	5 cut(s)	159, 1071, 1157, 1294, 1368
SfaNI	GCATC	5 cut(s)	90, 241, 359, 841, 859
SfcI	CTRYAG	3 cut(s)	247, 873, 984
Sfr274I	CTCGAG	1 cut(s)	672
SinI	GGWCC	2 cut(s)	508, 1307
SlaI	CTCGAG	1 cut(s)	672
SmiMI	CAYNNNNRTG	4 cut(s)	191, 418, 844, 1484
SmlI	CTYRAG	1 cut(s)	672
SmoI	CTYRAG	1 cut(s)	672
SpeI	ACTAGT	1 cut(s)	461
Sse9I	AATT	7 cut(s)	94, 1023, 1358, 1474, 1512, 1582, 1600
SsiI	CCGC	4 cut(s)	24, 27, 370, 1517
SspMI	CTAG	3 cut(s)	462, 1235, 1415
StyD4I	CCNGG	5 cut(s)	259, 861, 1002, 1143, 1317
StyI	CCWWGG	1 cut(s)	498
TaaI	ACNGT	4 cut(s)	151, 484, 1183, 1502
TaiI	ACGT	1 cut(s)	620
TaqI	TCGA	3 cut(s)	273, 652, 673
TasI	AATT	7 cut(s)	94, 1023, 1358, 1474, 1512, 1582, 1600
TatI	WGTACW	3 cut(s)	974, 1178, 1270
TauI	GCSGC	2 cut(s)	27, 30
TfiI	GAWTC	6 cut(s)	113, 313, 654, 695, 968, 1028
Tru1I	TTAA	8 cut(s)	293, 585, 620, 645, 891, 1458, 1532, 1563
Tru9I	TTAA	8 cut(s)	293, 585, 620, 645, 891, 1458, 1532, 1563
TscAI	CASTG	7 cut(s)	331, 489, 546, 630, 882, 1431, 1449
TseFI	GTSAC	1 cut(s)	322
TseI	GCWGC	5 cut(s)	39, 367, 494, 547, 872
Tsp45I	GTSAC	1 cut(s)	322
TspDTI	ATGAA	9 cut(s)	17, 68, 282, 312, 627, 710, 725, 1067, 1529
TspRI	CASTG	7 cut(s)	331, 489, 546, 630, 882, 1431, 1449
Van91I	CCANNNNNTGG	1 cut(s)	766
VpaK11BI	GGWCC	2 cut(s)	508, 1307
VspI	ATTAAT	1 cut(s)	585
XapI	RAATTY	2 cut(s)	94, 1512
XceI	RCATGY	3 cut(s)	142, 849, 1271
XhoI	CTCGAG	1 cut(s)	672
XmnI	GAANNNNTTC	1 cut(s)	1600
XspI	CTAG	3 cut(s)	462, 1235, 1415
Zsp2I	ATGCAT	2 cut(s)	188, 1222

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.