Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G36100 AT3G11550 AT5G06200 |
| fragaria_vesca | FvH4_2g15060 FvH4_5g26140 FvH4_6g19500 |
| malus_domestica | MD12G1031100.v1.1 MD12G1031200.v1.1 MD14G1031600.v1.1 |
| prunus_persica | Prupe.7G101300_v2.0.a1 Prupe.8G014400_v2.0.a1 |
| pyrus_communis | pycom12g02910 pycom12g02920 |
| rosa_chinensis | RchiOBHm_Chr3g0474831 RchiOBHm_Chr6g0277661 RchiOBHm_Chr7g0216851 |
| rosa_laevigata | RLG00000002533 RLG00000013284 RLG00000023891 |
| rosa_multiflora | Rmu_sc0000125.1_g000011 Rmu_sc0004848.1_g000011 Rmu_sc0011900.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00242820 Rroxscaffold_6G00406810 |
| rosa_rugosa | Rorug03G0144500 Rorug06G0110500 Rorug07G0163700 |
| rosa_samantha | Rh3AG194000 Rh3BG223900 Rh3CG218800 Rh3DG219800 Rh6AG217000 Rh7AG303200 Rh7BG295100 Rh7CG321800 Rh7DG303700 |
| rosa_wichuraiana | Rw3G017670 Rw6G018930 Rw7G025790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 56 |
| AccBSI | CCGCTC | 1 cut(s) | 9 |
| AccI | GTMKAC | 1 cut(s) | 453 |
| AciI | CCGC | 4 cut(s) | 9, 51, 60, 534 |
| AcoI | YGGCCR | 2 cut(s) | 132, 417 |
| AcyI | GRCGYC | 1 cut(s) | 57 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 43 |
| AgsI | TTSAA | 1 cut(s) | 248 |
| AjnI | CCWGG | 1 cut(s) | 414 |
| AluBI | AGCT | 3 cut(s) | 251, 255, 480 |
| AluI | AGCT | 3 cut(s) | 251, 255, 480 |
| Alw21I | GWGCWC | 1 cut(s) | 324 |
| Alw26I | GTCTC | 1 cut(s) | 349 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 95 |
| AoxI | GGCC | 3 cut(s) | 45, 132, 417 |
| ApeKI | GCWGC | 6 cut(s) | 173, 182, 185, 188, 428, 437 |
| AspLEI | GCGC | 1 cut(s) | 59 |
| AsuHPI | GGTGA | 4 cut(s) | 23, 220, 403, 524 |
| AsuNHI | GCTAGC | 1 cut(s) | 251 |
| BalI | TGGCCA | 2 cut(s) | 134, 419 |
| BanI | GGYRCC | 1 cut(s) | 56 |
| Bbv12I | GWGCWC | 1 cut(s) | 324 |
| BbvI | GCAGC | 6 cut(s) | 160, 169, 172, 200, 415, 424 |
| BccI | CCATC | 3 cut(s) | 45, 124, 503 |
| BciT130I | CCWGG | 1 cut(s) | 416 |
| BclI | TGATCA | 1 cut(s) | 208 |
| BcoDI | GTCTC | 1 cut(s) | 349 |
| BfaI | CTAG | 1 cut(s) | 252 |
| BfmI | CTRYAG | 2 cut(s) | 165, 186 |
| BfoI | RGCGCY | 1 cut(s) | 60 |
| BisI | GCNGC | 7 cut(s) | 60, 174, 183, 186, 189, 429, 438 |
| BlsI | GCNGC | 7 cut(s) | 61, 175, 184, 187, 190, 430, 439 |
| Bme1390I | CCNGG | 1 cut(s) | 416 |
| BmiI | GGNNCC | 1 cut(s) | 58 |
| BmrFI | CCNGG | 1 cut(s) | 416 |
| BmrI | ACTGGG | 2 cut(s) | 226, 264 |
| BmsI | GCATC | 1 cut(s) | 71 |
| BmtI | GCTAGC | 1 cut(s) | 255 |
| BmuI | ACTGGG | 2 cut(s) | 226, 264 |
| BpuEI | CTTGAG | 1 cut(s) | 460 |
| BsaHI | GRCGYC | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 2 cut(s) | 195, 414 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 464, 494 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 43 |
| Bse1I | ACTGG | 5 cut(s) | 232, 241, 270, 277, 505 |
| Bse3DI | GCAATG | 1 cut(s) | 300 |
| BseBI | CCWGG | 1 cut(s) | 416 |
| BseDI | CCNNGG | 2 cut(s) | 195, 414 |
| BseGI | GGATG | 3 cut(s) | 123, 135, 390 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BseMI | GCAATG | 1 cut(s) | 300 |
| BseMII | CTCAG | 1 cut(s) | 339 |
| BseNI | ACTGG | 5 cut(s) | 232, 241, 270, 277, 505 |
| BseRI | GAGGAG | 2 cut(s) | 136, 377 |
| BseXI | GCAGC | 6 cut(s) | 160, 169, 172, 200, 415, 424 |
| BseYI | CCCAGC | 1 cut(s) | 431 |
| BshFI | GGCC | 3 cut(s) | 47, 134, 419 |
| BshNI | GGYRCC | 1 cut(s) | 56 |
| BsiHKAI | GWGCWC | 1 cut(s) | 324 |
| BslFI | GGGAC | 2 cut(s) | 77, 342 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BsmAI | GTCTC | 1 cut(s) | 349 |
| BsmFI | GGGAC | 2 cut(s) | 77, 342 |
| BsnI | GGCC | 3 cut(s) | 47, 134, 419 |
| Bsp1286I | GDGCHC | 1 cut(s) | 324 |
| Bsp143I | GATC | 1 cut(s) | 208 |
| Bsp19I | CCATGG | 1 cut(s) | 195 |
| BspACI | CCGC | 4 cut(s) | 9, 51, 60, 534 |
| BspANI | GGCC | 3 cut(s) | 47, 134, 419 |
| BspCNI | CTCAG | 1 cut(s) | 338 |
| BspHI | TCATGA | 1 cut(s) | 40 |
| BspLI | GGNNCC | 1 cut(s) | 58 |
| BspMAI | CTGCAG | 1 cut(s) | 190 |
| BspOI | GCTAGC | 1 cut(s) | 255 |
| BspT107I | GGYRCC | 1 cut(s) | 56 |
| BsrBI | CCGCTC | 1 cut(s) | 9 |
| BsrDI | GCAATG | 1 cut(s) | 300 |
| BsrI | ACTGG | 5 cut(s) | 232, 241, 270, 277, 505 |
| BssECI | CCNNGG | 2 cut(s) | 195, 414 |
| BssMI | GATC | 1 cut(s) | 208 |
| BssNI | GRCGYC | 1 cut(s) | 57 |
| BssT1I | CCWWGG | 1 cut(s) | 195 |
| Bst2UI | CCWGG | 1 cut(s) | 416 |
| Bst4CI | ACNGT | 3 cut(s) | 91, 529, 562 |
| BstACI | GRCGYC | 1 cut(s) | 57 |
| BstC8I | GCNNGC | 4 cut(s) | 49, 253, 310, 492 |
| BstDEI | CTNAG | 1 cut(s) | 325 |
| BstDSI | CCRYGG | 1 cut(s) | 195 |
| BstF5I | GGATG | 3 cut(s) | 123, 135, 390 |
| BstH2I | RGCGCY | 1 cut(s) | 60 |
| BstHHI | GCGC | 1 cut(s) | 59 |
| BstKTI | GATC | 1 cut(s) | 211 |
| BstMAI | GTCTC | 1 cut(s) | 349 |
| BstMBI | GATC | 1 cut(s) | 208 |
| BstNI | CCWGG | 1 cut(s) | 416 |
| BstNSI | RCATGY | 1 cut(s) | 268 |
| BstSCI | CCNGG | 1 cut(s) | 414 |
| BstSFI | CTRYAG | 2 cut(s) | 165, 186 |
| BstV1I | GCAGC | 6 cut(s) | 160, 169, 172, 200, 415, 424 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 368 |
| BsuRI | GGCC | 3 cut(s) | 47, 134, 419 |
| BtgI | CCRYGG | 1 cut(s) | 195 |
| BtsCI | GGATG | 3 cut(s) | 123, 135, 390 |
| Cac8I | GCNNGC | 4 cut(s) | 49, 253, 310, 492 |
| CaiI | CAGNNNCTG | 1 cut(s) | 95 |
| CciI | TCATGA | 1 cut(s) | 40 |
| CfoI | GCGC | 1 cut(s) | 59 |
| CviAII | CATG | 5 cut(s) | 41, 196, 265, 362, 574 |
| DdeI | CTNAG | 1 cut(s) | 325 |
| DinI | GGCGCC | 1 cut(s) | 58 |
| DpnI | GATC | 1 cut(s) | 210 |
| DpnII | GATC | 1 cut(s) | 208 |
| EaeI | YGGCCR | 2 cut(s) | 132, 417 |
| Eco130I | CCWWGG | 1 cut(s) | 195 |
| EcoRII | CCWGG | 1 cut(s) | 414 |
| EcoT14I | CCWWGG | 1 cut(s) | 195 |
| EgeI | GGCGCC | 1 cut(s) | 58 |
| EheI | GGCGCC | 1 cut(s) | 58 |
| ErhI | CCWWGG | 1 cut(s) | 195 |
| FaeI | CATG | 5 cut(s) | 44, 199, 268, 365, 577 |
| FaqI | GGGAC | 2 cut(s) | 77, 342 |
| FatI | CATG | 5 cut(s) | 40, 195, 264, 361, 573 |
| FauI | CCCGC | 1 cut(s) | 527 |
| FbaI | TGATCA | 1 cut(s) | 208 |
| FblI | GTMKAC | 1 cut(s) | 453 |
| Fnu4HI | GCNGC | 7 cut(s) | 60, 174, 183, 186, 189, 429, 438 |
| FokI | GGATG | 3 cut(s) | 130, 142, 377 |
| Fsp4HI | GCNGC | 7 cut(s) | 60, 174, 183, 186, 189, 429, 438 |
| FspBI | CTAG | 1 cut(s) | 252 |
| GlaI | GCGC | 1 cut(s) | 58 |
| GluI | GCNGC | 7 cut(s) | 60, 174, 183, 186, 189, 429, 438 |
| GsaI | CCCAGC | 1 cut(s) | 435 |
| HaeII | RGCGCY | 1 cut(s) | 60 |
| HaeIII | GGCC | 3 cut(s) | 47, 134, 419 |
| HhaI | GCGC | 1 cut(s) | 59 |
| Hin1I | GRCGYC | 1 cut(s) | 57 |
| Hin1II | CATG | 5 cut(s) | 44, 199, 268, 365, 577 |
| Hin6I | GCGC | 1 cut(s) | 57 |
| HinP1I | GCGC | 1 cut(s) | 57 |
| HinfI | GANTC | 2 cut(s) | 14, 583 |
| HphI | GGTGA | 4 cut(s) | 23, 220, 403, 524 |
| Hpy166II | GTNNAC | 1 cut(s) | 454 |
| Hpy188I | TCNGA | 3 cut(s) | 87, 525, 608 |
| Hpy188III | TCNNGA | 2 cut(s) | 41, 580 |
| Hpy8I | GTNNAC | 1 cut(s) | 454 |
| HpyAV | CCTTC | 4 cut(s) | 103, 227, 343, 580 |
| HpyCH4III | ACNGT | 3 cut(s) | 91, 529, 562 |
| HpyCH4IV | ACGT | 1 cut(s) | 399 |
| HpyCH4V | TGCA | 5 cut(s) | 98, 188, 365, 440, 501 |
| HpyF3I | CTNAG | 1 cut(s) | 325 |
| HpySE526I | ACGT | 1 cut(s) | 399 |
| Hsp92I | GRCGYC | 1 cut(s) | 57 |
| Hsp92II | CATG | 5 cut(s) | 44, 199, 268, 365, 577 |
| HspAI | GCGC | 1 cut(s) | 57 |
| KasI | GGCGCC | 1 cut(s) | 56 |
| Ksp22I | TGATCA | 1 cut(s) | 208 |
| Kzo9I | GATC | 1 cut(s) | 208 |
| LmnI | GCTCC | 2 cut(s) | 390, 485 |
| Lsp1109I | GCAGC | 6 cut(s) | 160, 169, 172, 200, 415, 424 |
| LweI | GCATC | 1 cut(s) | 71 |
| MaeI | CTAG | 1 cut(s) | 252 |
| MaeII | ACGT | 1 cut(s) | 399 |
| MaeIII | GTNAC | 3 cut(s) | 11, 556, 565 |
| MalI | GATC | 1 cut(s) | 210 |
| MbiI | CCGCTC | 1 cut(s) | 9 |
| MboI | GATC | 1 cut(s) | 208 |
| MboII | GAAGA | 3 cut(s) | 16, 217, 229 |
| MfeI | CAATTG | 1 cut(s) | 484 |
| MhlI | GDGCHC | 1 cut(s) | 324 |
| MlsI | TGGCCA | 2 cut(s) | 134, 419 |
| MluCI | AATT | 3 cut(s) | 81, 138, 484 |
| MluNI | TGGCCA | 2 cut(s) | 134, 419 |
| Mly113I | GGCGCC | 1 cut(s) | 57 |
| MlyI | GAGTC | 1 cut(s) | 8 |
| MnlI | CCTC | 7 cut(s) | 37, 107, 114, 119, 147, 296, 398 |
| Mox20I | TGGCCA | 2 cut(s) | 134, 419 |
| MscI | TGGCCA | 2 cut(s) | 134, 419 |
| MslI | CAYNNNNRTG | 2 cut(s) | 293, 366 |
| Msp20I | TGGCCA | 2 cut(s) | 134, 419 |
| MspA1I | CMGCKG | 2 cut(s) | 51, 534 |
| MspR9I | CCNGG | 1 cut(s) | 416 |
| MunI | CAATTG | 1 cut(s) | 484 |
| MvaI | CCWGG | 1 cut(s) | 416 |
| NarI | GGCGCC | 1 cut(s) | 57 |
| NcoI | CCATGG | 1 cut(s) | 195 |
| NdeII | GATC | 1 cut(s) | 208 |
| NheI | GCTAGC | 1 cut(s) | 251 |
| NlaIII | CATG | 5 cut(s) | 44, 199, 268, 365, 577 |
| NlaIV | GGNNCC | 1 cut(s) | 58 |
| NmuCI | GTSAC | 1 cut(s) | 11 |
| NspI | RCATGY | 1 cut(s) | 268 |
| PagI | TCATGA | 1 cut(s) | 40 |
| PfeI | GAWTC | 1 cut(s) | 583 |
| PkrI | GCNGC | 7 cut(s) | 61, 175, 184, 187, 190, 430, 439 |
| PleI | GAGTC | 1 cut(s) | 8 |
| PluTI | GGCGCC | 1 cut(s) | 60 |
| PpsI | GAGTC | 1 cut(s) | 8 |
| Psp6I | CCWGG | 1 cut(s) | 414 |
| PspFI | CCCAGC | 1 cut(s) | 431 |
| PspGI | CCWGG | 1 cut(s) | 414 |
| PspN4I | GGNNCC | 1 cut(s) | 58 |
| PstI | CTGCAG | 1 cut(s) | 190 |
| PstNI | CAGNNNCTG | 1 cut(s) | 95 |
| RseI | CAYNNNNRTG | 2 cut(s) | 293, 366 |
| SatI | GCNGC | 7 cut(s) | 60, 174, 183, 186, 189, 429, 438 |
| Sau3AI | GATC | 1 cut(s) | 208 |
| SchI | GAGTC | 1 cut(s) | 8 |
| ScrFI | CCNGG | 1 cut(s) | 416 |
| SduI | GDGCHC | 1 cut(s) | 324 |
| SetI | ASST | 6 cut(s) | 219, 253, 257, 402, 482, 572 |
| SfaNI | GCATC | 1 cut(s) | 71 |
| SfcI | CTRYAG | 2 cut(s) | 165, 186 |
| SfoI | GGCGCC | 1 cut(s) | 58 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 293, 366 |
| SmlI | CTYRAG | 1 cut(s) | 475 |
| SmoI | CTYRAG | 1 cut(s) | 475 |
| Sse9I | AATT | 3 cut(s) | 81, 138, 484 |
| SsiI | CCGC | 4 cut(s) | 9, 51, 60, 534 |
| SspDI | GGCGCC | 1 cut(s) | 56 |
| SspMI | CTAG | 1 cut(s) | 252 |
| StyD4I | CCNGG | 1 cut(s) | 414 |
| StyI | CCWWGG | 1 cut(s) | 195 |
| TaaI | ACNGT | 3 cut(s) | 91, 529, 562 |
| TaiI | ACGT | 1 cut(s) | 402 |
| TaqI | TCGA | 1 cut(s) | 65 |
| TasI | AATT | 3 cut(s) | 81, 138, 484 |
| TauI | GCSGC | 1 cut(s) | 62 |
| TfiI | GAWTC | 1 cut(s) | 583 |
| TseFI | GTSAC | 1 cut(s) | 11 |
| TseI | GCWGC | 6 cut(s) | 173, 182, 185, 188, 428, 437 |
| Tsp45I | GTSAC | 1 cut(s) | 11 |
| TspDTI | ATGAA | 2 cut(s) | 17, 562 |
| XceI | RCATGY | 1 cut(s) | 268 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 142, 454 |
| XmiI | GTMKAC | 1 cut(s) | 453 |
| XspI | CTAG | 1 cut(s) | 252 |