Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G36100 AT3G11550 AT5G06200 |
| fragaria_vesca | FvH4_2g15060 FvH4_5g26140 FvH4_6g19500 |
| malus_domestica | MD12G1031100.v1.1 MD12G1031200.v1.1 MD14G1031600.v1.1 |
| prunus_persica | Prupe.7G101300_v2.0.a1 Prupe.8G014400_v2.0.a1 |
| pyrus_communis | pycom12g02910 pycom12g02920 |
| rosa_chinensis | RchiOBHm_Chr3g0474831 RchiOBHm_Chr6g0277661 RchiOBHm_Chr7g0216851 |
| rosa_laevigata | RLG00000002533 RLG00000013284 RLG00000023891 |
| rosa_multiflora | Rmu_sc0000125.1_g000011 Rmu_sc0004848.1_g000011 Rmu_sc0011900.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00242820 Rroxscaffold_6G00406810 |
| rosa_rugosa | Rorug03G0144500 Rorug06G0110500 Rorug07G0163700 |
| rosa_samantha | Rh3AG194000 Rh3BG223900 Rh3CG218800 Rh3DG219800 Rh6AG217000 Rh7AG303200 Rh7BG295100 Rh7CG321800 Rh7DG303700 |
| rosa_wichuraiana | Rw3G017670 Rw6G018930 Rw7G025790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 34, 278 |
| AciI | CCGC | 6 cut(s) | 46, 69, 81, 165, 278, 281 |
| AclWI | GGATC | 1 cut(s) | 257 |
| AcoI | YGGCCR | 2 cut(s) | 141, 291 |
| AcvI | CACGTG | 1 cut(s) | 75 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 52, 75, 313, 319, 331 |
| AjiI | CACGTC | 1 cut(s) | 199 |
| AjnI | CCWGG | 2 cut(s) | 245, 306 |
| AluBI | AGCT | 1 cut(s) | 232 |
| AluI | AGCT | 1 cut(s) | 232 |
| Alw26I | GTCTC | 1 cut(s) | 142 |
| AlwI | GGATC | 1 cut(s) | 257 |
| Ama87I | CYCGRG | 1 cut(s) | 122 |
| AoxI | GGCC | 5 cut(s) | 108, 141, 291, 315, 322 |
| AspLEI | GCGC | 1 cut(s) | 36 |
| AspS9I | GGNCC | 4 cut(s) | 78, 310, 315, 322 |
| AsuC2I | CCSGG | 3 cut(s) | 204, 295, 314 |
| AsuHPI | GGTGA | 1 cut(s) | 10 |
| AvaI | CYCGRG | 1 cut(s) | 122 |
| AvaII | GGWCC | 2 cut(s) | 78, 310 |
| BbrPI | CACGTG | 1 cut(s) | 75 |
| BbsI | GAAGAC | 1 cut(s) | 150 |
| BciT130I | CCWGG | 2 cut(s) | 247, 308 |
| BcnI | CCSGG | 3 cut(s) | 204, 295, 314 |
| BcoDI | GTCTC | 1 cut(s) | 142 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 299 |
| BisI | GCNGC | 3 cut(s) | 69, 166, 279 |
| BlpI | GCTNAGC | 1 cut(s) | 228 |
| BlsI | GCNGC | 3 cut(s) | 70, 167, 280 |
| Bme1390I | CCNGG | 5 cut(s) | 204, 247, 295, 308, 314 |
| Bme18I | GGWCC | 2 cut(s) | 78, 310 |
| BmeT110I | CYCGRG | 1 cut(s) | 122 |
| BmgBI | CACGTC | 1 cut(s) | 199 |
| BmgT120I | GGNCC | 4 cut(s) | 78, 310, 315, 322 |
| BmiI | GGNNCC | 1 cut(s) | 169 |
| BmrFI | CCNGG | 5 cut(s) | 204, 247, 295, 308, 314 |
| BmrI | ACTGGG | 1 cut(s) | 340 |
| BmuI | ACTGGG | 1 cut(s) | 340 |
| BpiI | GAAGAC | 1 cut(s) | 150 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 198, 230 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 228 |
| BpuMI | CCSGG | 3 cut(s) | 204, 295, 314 |
| BsaAI | YACGTR | 1 cut(s) | 75 |
| BsaJI | CCNNGG | 2 cut(s) | 123, 318 |
| BsaWI | WCCGGW | 1 cut(s) | 268 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 52, 75, 313, 319, 331 |
| Bse118I | RCCGGY | 2 cut(s) | 52, 223 |
| Bse1I | ACTGG | 1 cut(s) | 346 |
| BseBI | CCWGG | 2 cut(s) | 247, 308 |
| BseDI | CCNNGG | 2 cut(s) | 123, 318 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 52, 75, 313, 319, 331 |
| BseMII | CTCAG | 1 cut(s) | 242 |
| BseNI | ACTGG | 1 cut(s) | 346 |
| Bsh1236I | CGCG | 2 cut(s) | 34, 278 |
| Bsh1285I | CGRYCG | 1 cut(s) | 285 |
| BshFI | GGCC | 5 cut(s) | 110, 143, 293, 317, 324 |
| BsiEI | CGRYCG | 1 cut(s) | 285 |
| BsiHKCI | CYCGRG | 1 cut(s) | 122 |
| BsiSI | CCGG | 6 cut(s) | 53, 203, 224, 269, 294, 313 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 52, 75, 313, 319, 331 |
| BsmAI | GTCTC | 1 cut(s) | 142 |
| BsnI | GGCC | 5 cut(s) | 110, 143, 293, 317, 324 |
| BsoBI | CYCGRG | 1 cut(s) | 122 |
| Bsp143I | GATC | 1 cut(s) | 249 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 228 |
| Bsp19I | CCATGG | 1 cut(s) | 318 |
| BspACI | CCGC | 6 cut(s) | 46, 69, 81, 165, 278, 281 |
| BspANI | GGCC | 5 cut(s) | 110, 143, 293, 317, 324 |
| BspCNI | CTCAG | 1 cut(s) | 241 |
| BspFNI | CGCG | 2 cut(s) | 34, 278 |
| BspLI | GGNNCC | 1 cut(s) | 169 |
| BspPI | GGATC | 1 cut(s) | 257 |
| BsrFI | RCCGGY | 2 cut(s) | 52, 223 |
| BsrI | ACTGG | 1 cut(s) | 346 |
| BssAI | RCCGGY | 2 cut(s) | 52, 223 |
| BssECI | CCNNGG | 2 cut(s) | 123, 318 |
| BssMI | GATC | 1 cut(s) | 249 |
| BssT1I | CCWWGG | 1 cut(s) | 318 |
| Bst2UI | CCWGG | 2 cut(s) | 247, 308 |
| Bst4CI | ACNGT | 1 cut(s) | 100 |
| Bst6I | CTCTTC | 1 cut(s) | 20 |
| BstBAI | YACGTR | 1 cut(s) | 75 |
| BstC8I | GCNNGC | 5 cut(s) | 50, 85, 221, 225, 304 |
| BstDEI | CTNAG | 1 cut(s) | 228 |
| BstDSI | CCRYGG | 1 cut(s) | 318 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 329 |
| BstFNI | CGCG | 2 cut(s) | 34, 278 |
| BstHHI | GCGC | 1 cut(s) | 36 |
| BstKTI | GATC | 1 cut(s) | 252 |
| BstMAI | GTCTC | 1 cut(s) | 142 |
| BstMBI | GATC | 1 cut(s) | 249 |
| BstMCI | CGRYCG | 1 cut(s) | 285 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 40, 49, 229, 299, 341 |
| BstNI | CCWGG | 2 cut(s) | 247, 308 |
| BstSCI | CCNGG | 5 cut(s) | 202, 245, 293, 306, 312 |
| BstUI | CGCG | 2 cut(s) | 34, 278 |
| BstV2I | GAAGAC | 1 cut(s) | 150 |
| BsuRI | GGCC | 5 cut(s) | 110, 143, 293, 317, 324 |
| BtgI | CCRYGG | 1 cut(s) | 318 |
| BtrI | CACGTC | 1 cut(s) | 199 |
| Cac8I | GCNNGC | 5 cut(s) | 50, 85, 221, 225, 304 |
| CfoI | GCGC | 1 cut(s) | 36 |
| Cfr10I | RCCGGY | 2 cut(s) | 52, 223 |
| Cfr13I | GGNCC | 4 cut(s) | 78, 310, 315, 322 |
| CseI | GACGC | 1 cut(s) | 165 |
| CviAII | CATG | 1 cut(s) | 319 |
| DdeI | CTNAG | 1 cut(s) | 228 |
| DpnI | GATC | 1 cut(s) | 251 |
| DpnII | GATC | 1 cut(s) | 249 |
| EaeI | YGGCCR | 2 cut(s) | 141, 291 |
| Eam1104I | CTCTTC | 1 cut(s) | 20 |
| EarI | CTCTTC | 1 cut(s) | 20 |
| Eco130I | CCWWGG | 1 cut(s) | 318 |
| Eco47I | GGWCC | 2 cut(s) | 78, 310 |
| Eco72I | CACGTG | 1 cut(s) | 75 |
| Eco88I | CYCGRG | 1 cut(s) | 122 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 329 |
| EcoRII | CCWGG | 2 cut(s) | 245, 306 |
| EcoT14I | CCWWGG | 1 cut(s) | 318 |
| ErhI | CCWWGG | 1 cut(s) | 318 |
| FaeI | CATG | 1 cut(s) | 322 |
| FaiI | YATR | 2 cut(s) | 182, 320 |
| FatI | CATG | 1 cut(s) | 318 |
| FauI | CCCGC | 1 cut(s) | 53 |
| Fnu4HI | GCNGC | 3 cut(s) | 69, 166, 279 |
| Fsp4HI | GCNGC | 3 cut(s) | 69, 166, 279 |
| GlaI | GCGC | 1 cut(s) | 35 |
| GluI | GCNGC | 3 cut(s) | 69, 166, 279 |
| HaeIII | GGCC | 5 cut(s) | 110, 143, 293, 317, 324 |
| HapII | CCGG | 6 cut(s) | 53, 203, 224, 269, 294, 313 |
| HgaI | GACGC | 1 cut(s) | 165 |
| HhaI | GCGC | 1 cut(s) | 36 |
| Hin1II | CATG | 1 cut(s) | 322 |
| Hin6I | GCGC | 1 cut(s) | 34 |
| HinP1I | GCGC | 1 cut(s) | 34 |
| HpaII | CCGG | 6 cut(s) | 53, 203, 224, 269, 294, 313 |
| HphI | GGTGA | 1 cut(s) | 10 |
| Hpy166II | GTNNAC | 1 cut(s) | 78 |
| Hpy188I | TCNGA | 1 cut(s) | 172 |
| Hpy188III | TCNNGA | 1 cut(s) | 122 |
| Hpy8I | GTNNAC | 1 cut(s) | 78 |
| HpyAV | CCTTC | 1 cut(s) | 124 |
| HpyCH4III | ACNGT | 1 cut(s) | 100 |
| HpyCH4IV | ACGT | 2 cut(s) | 74, 198 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 40, 49, 229, 299, 341 |
| HpyF3I | CTNAG | 1 cut(s) | 228 |
| HpySE526I | ACGT | 2 cut(s) | 74, 198 |
| Hsp92II | CATG | 1 cut(s) | 322 |
| HspAI | GCGC | 1 cut(s) | 34 |
| KroI | GCCGGC | 1 cut(s) | 223 |
| KroNI | GCCGGC | 1 cut(s) | 225 |
| Kzo9I | GATC | 1 cut(s) | 249 |
| LmnI | GCTCC | 2 cut(s) | 9, 173 |
| MaeII | ACGT | 2 cut(s) | 74, 198 |
| MalI | GATC | 1 cut(s) | 251 |
| MboI | GATC | 1 cut(s) | 249 |
| MboII | GAAGA | 6 cut(s) | 7, 55, 141, 144, 150, 250 |
| MnlI | CCTC | 8 cut(s) | 19, 31, 47, 98, 118, 121, 276, 325 |
| MroNI | GCCGGC | 1 cut(s) | 223 |
| MspA1I | CMGCKG | 1 cut(s) | 232 |
| MspI | CCGG | 6 cut(s) | 53, 203, 224, 269, 294, 313 |
| MspR9I | CCNGG | 5 cut(s) | 204, 247, 295, 308, 314 |
| MvaI | CCWGG | 2 cut(s) | 247, 308 |
| MvnI | CGCG | 2 cut(s) | 34, 278 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 40, 49, 229, 299, 341 |
| NaeI | GCCGGC | 1 cut(s) | 225 |
| NciI | CCSGG | 3 cut(s) | 204, 295, 314 |
| NcoI | CCATGG | 1 cut(s) | 318 |
| NdeII | GATC | 1 cut(s) | 249 |
| NgoMIV | GCCGGC | 1 cut(s) | 223 |
| NlaIII | CATG | 1 cut(s) | 322 |
| NlaIV | GGNNCC | 1 cut(s) | 169 |
| NmeAIII | GCCGAG | 1 cut(s) | 119 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 258, 282 |
| PdiI | GCCGGC | 1 cut(s) | 225 |
| PfoI | TCCNGGA | 1 cut(s) | 245 |
| PkrI | GCNGC | 3 cut(s) | 70, 167, 280 |
| PmaCI | CACGTG | 1 cut(s) | 75 |
| PmlI | CACGTG | 1 cut(s) | 75 |
| Ppu21I | YACGTR | 1 cut(s) | 75 |
| Psp6I | CCWGG | 2 cut(s) | 245, 306 |
| PspCI | CACGTG | 1 cut(s) | 75 |
| PspGI | CCWGG | 2 cut(s) | 245, 306 |
| PspN4I | GGNNCC | 1 cut(s) | 169 |
| PspPI | GGNCC | 4 cut(s) | 78, 310, 315, 322 |
| PvuII | CAGCTG | 1 cut(s) | 232 |
| SatI | GCNGC | 3 cut(s) | 69, 166, 279 |
| Sau3AI | GATC | 1 cut(s) | 249 |
| Sau96I | GGNCC | 4 cut(s) | 78, 310, 315, 322 |
| ScrFI | CCNGG | 5 cut(s) | 204, 247, 295, 308, 314 |
| SetI | ASST | 5 cut(s) | 23, 77, 129, 201, 234 |
| SinI | GGWCC | 2 cut(s) | 78, 310 |
| SsiI | CCGC | 6 cut(s) | 46, 69, 81, 165, 278, 281 |
| StyD4I | CCNGG | 5 cut(s) | 202, 245, 293, 306, 312 |
| StyI | CCWWGG | 1 cut(s) | 318 |
| TaaI | ACNGT | 1 cut(s) | 100 |
| TaiI | ACGT | 2 cut(s) | 77, 201 |
| TaqI | TCGA | 1 cut(s) | 252 |
| TauI | GCSGC | 3 cut(s) | 71, 168, 281 |
| VpaK11BI | GGWCC | 2 cut(s) | 78, 310 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 329 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 187 |