Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G36100 AT3G11550 AT5G06200 |
| fragaria_vesca | FvH4_2g15060 FvH4_5g26140 FvH4_6g19500 |
| malus_domestica | MD12G1031100.v1.1 MD12G1031200.v1.1 MD14G1031600.v1.1 |
| prunus_persica | Prupe.7G101300_v2.0.a1 Prupe.8G014400_v2.0.a1 |
| pyrus_communis | pycom12g02910 pycom12g02920 |
| rosa_chinensis | RchiOBHm_Chr3g0474831 RchiOBHm_Chr6g0277661 RchiOBHm_Chr7g0216851 |
| rosa_laevigata | RLG00000002533 RLG00000013284 RLG00000023891 |
| rosa_multiflora | Rmu_sc0000125.1_g000011 Rmu_sc0004848.1_g000011 Rmu_sc0011900.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00242820 Rroxscaffold_6G00406810 |
| rosa_rugosa | Rorug03G0144500 Rorug06G0110500 Rorug07G0163700 |
| rosa_samantha | Rh3AG194000 Rh3BG223900 Rh3CG218800 Rh3DG219800 Rh6AG217000 Rh7AG303200 Rh7BG295100 Rh7CG321800 Rh7DG303700 |
| rosa_wichuraiana | Rw3G017670 Rw6G018930 Rw7G025790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 201 |
| AluBI | AGCT | 3 cut(s) | 17, 56, 228 |
| AluI | AGCT | 3 cut(s) | 17, 56, 228 |
| Alw21I | GWGCWC | 1 cut(s) | 72 |
| Alw26I | GTCTC | 1 cut(s) | 97 |
| ApeKI | GCWGC | 2 cut(s) | 176, 185 |
| AspS9I | GGNCC | 1 cut(s) | 119 |
| AsuHPI | GGTGA | 2 cut(s) | 272, 307 |
| AsuNHI | GCTAGC | 1 cut(s) | 238 |
| AvaII | GGWCC | 1 cut(s) | 119 |
| Bbv12I | GWGCWC | 1 cut(s) | 72 |
| BbvI | GCAGC | 2 cut(s) | 163, 172 |
| BccI | CCATC | 3 cut(s) | 95, 104, 251 |
| BcoDI | GTCTC | 1 cut(s) | 97 |
| BfaI | CTAG | 4 cut(s) | 14, 164, 206, 239 |
| BisI | GCNGC | 2 cut(s) | 177, 186 |
| BlsI | GCNGC | 2 cut(s) | 178, 187 |
| Bme18I | GGWCC | 1 cut(s) | 119 |
| BmgT120I | GGNCC | 1 cut(s) | 119 |
| BmtI | GCTAGC | 1 cut(s) | 242 |
| BoxI | GACNNNNGTC | 1 cut(s) | 164 |
| BsaJI | CCNNGG | 1 cut(s) | 122 |
| Bse1I | ACTGG | 2 cut(s) | 239, 253 |
| Bse3DI | GCAATG | 2 cut(s) | 48, 226 |
| BseDI | CCNNGG | 1 cut(s) | 122 |
| BseGI | GGATG | 2 cut(s) | 138, 191 |
| BseMI | GCAATG | 2 cut(s) | 48, 226 |
| BseNI | ACTGG | 2 cut(s) | 239, 253 |
| BseXI | GCAGC | 2 cut(s) | 163, 172 |
| BseYI | CCCAGC | 1 cut(s) | 179 |
| BsiHKAI | GWGCWC | 1 cut(s) | 72 |
| BsiSI | CCGG | 1 cut(s) | 271 |
| BsmAI | GTCTC | 1 cut(s) | 97 |
| BsmBI | CGTCTC | 1 cut(s) | 97 |
| Bsp1286I | GDGCHC | 1 cut(s) | 72 |
| BspOI | GCTAGC | 1 cut(s) | 242 |
| BsrDI | GCAATG | 2 cut(s) | 48, 226 |
| BsrI | ACTGG | 2 cut(s) | 239, 253 |
| BssECI | CCNNGG | 1 cut(s) | 122 |
| BssT1I | CCWWGG | 1 cut(s) | 122 |
| Bst4CI | ACNGT | 1 cut(s) | 310 |
| BstC8I | GCNNGC | 3 cut(s) | 58, 226, 240 |
| BstF5I | GGATG | 2 cut(s) | 138, 191 |
| BstMAI | GTCTC | 1 cut(s) | 97 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 182, 185, 225, 293 |
| BstNSI | RCATGY | 1 cut(s) | 12 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 164 |
| BstV1I | GCAGC | 2 cut(s) | 163, 172 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 116 |
| BtsCI | GGATG | 2 cut(s) | 138, 191 |
| BtsIMutI | CAGTG | 2 cut(s) | 155, 364 |
| Cac8I | GCNNGC | 3 cut(s) | 58, 226, 240 |
| Cfr13I | GGNCC | 1 cut(s) | 119 |
| CviAII | CATG | 3 cut(s) | 9, 110, 322 |
| Eco130I | CCWWGG | 1 cut(s) | 122 |
| Eco47I | GGWCC | 1 cut(s) | 119 |
| EcoT14I | CCWWGG | 1 cut(s) | 122 |
| ErhI | CCWWGG | 1 cut(s) | 122 |
| Esp3I | CGTCTC | 1 cut(s) | 97 |
| FaeI | CATG | 3 cut(s) | 12, 113, 325 |
| FaiI | YATR | 4 cut(s) | 10, 111, 197, 323 |
| FatI | CATG | 3 cut(s) | 8, 109, 321 |
| FblI | GTMKAC | 1 cut(s) | 201 |
| Fnu4HI | GCNGC | 2 cut(s) | 177, 186 |
| FokI | GGATG | 2 cut(s) | 125, 178 |
| Fsp4HI | GCNGC | 2 cut(s) | 177, 186 |
| FspBI | CTAG | 4 cut(s) | 14, 164, 206, 239 |
| GluI | GCNGC | 2 cut(s) | 177, 186 |
| GsaI | CCCAGC | 1 cut(s) | 183 |
| HapII | CCGG | 1 cut(s) | 271 |
| Hin1II | CATG | 3 cut(s) | 12, 113, 325 |
| HinfI | GANTC | 2 cut(s) | 160, 331 |
| HpaII | CCGG | 1 cut(s) | 271 |
| HphI | GGTGA | 2 cut(s) | 272, 307 |
| Hpy166II | GTNNAC | 2 cut(s) | 119, 202 |
| Hpy188I | TCNGA | 1 cut(s) | 356 |
| Hpy188III | TCNNGA | 1 cut(s) | 328 |
| Hpy8I | GTNNAC | 2 cut(s) | 119, 202 |
| HpyAV | CCTTC | 3 cut(s) | 91, 310, 328 |
| HpyCH4III | ACNGT | 1 cut(s) | 310 |
| HpyCH4IV | ACGT | 2 cut(s) | 26, 276 |
| HpyCH4V | TGCA | 4 cut(s) | 113, 188, 224, 249 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 182, 185, 225, 293 |
| HpySE526I | ACGT | 2 cut(s) | 26, 276 |
| Hsp92II | CATG | 3 cut(s) | 12, 113, 325 |
| LmnI | GCTCC | 1 cut(s) | 233 |
| LpnPI | CCDG | 5 cut(s) | 42, 165, 220, 266, 284 |
| Lsp1109I | GCAGC | 2 cut(s) | 163, 172 |
| MaeI | CTAG | 4 cut(s) | 14, 164, 206, 239 |
| MaeII | ACGT | 2 cut(s) | 26, 276 |
| MaeIII | GTNAC | 3 cut(s) | 166, 304, 313 |
| MfeI | CAATTG | 1 cut(s) | 48 |
| MhlI | GDGCHC | 1 cut(s) | 72 |
| MluCI | AATT | 1 cut(s) | 48 |
| MlyI | GAGTC | 1 cut(s) | 154 |
| MmeI | TCCRAC | 1 cut(s) | 255 |
| MslI | CAYNNNNRTG | 2 cut(s) | 114, 320 |
| MspI | CCGG | 1 cut(s) | 271 |
| MunI | CAATTG | 1 cut(s) | 48 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 182, 185, 225, 293 |
| NheI | GCTAGC | 1 cut(s) | 238 |
| NlaIII | CATG | 3 cut(s) | 12, 113, 325 |
| NmuCI | GTSAC | 2 cut(s) | 166, 313 |
| NspI | RCATGY | 1 cut(s) | 12 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 96, 309 |
| PfeI | GAWTC | 1 cut(s) | 331 |
| PkrI | GCNGC | 2 cut(s) | 178, 187 |
| PleI | GAGTC | 1 cut(s) | 154 |
| PpsI | GAGTC | 1 cut(s) | 154 |
| PshAI | GACNNNNGTC | 1 cut(s) | 164 |
| PspFI | CCCAGC | 1 cut(s) | 179 |
| PspPI | GGNCC | 1 cut(s) | 119 |
| RseI | CAYNNNNRTG | 2 cut(s) | 114, 320 |
| SatI | GCNGC | 2 cut(s) | 177, 186 |
| Sau96I | GGNCC | 1 cut(s) | 119 |
| SchI | GAGTC | 1 cut(s) | 154 |
| SduI | GDGCHC | 1 cut(s) | 72 |
| SetI | ASST | 8 cut(s) | 19, 29, 58, 150, 207, 230, 279, 320 |
| SinI | GGWCC | 1 cut(s) | 119 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 114, 320 |
| Sse9I | AATT | 1 cut(s) | 48 |
| SspMI | CTAG | 4 cut(s) | 14, 164, 206, 239 |
| StyI | CCWWGG | 1 cut(s) | 122 |
| TaaI | ACNGT | 1 cut(s) | 310 |
| TaiI | ACGT | 2 cut(s) | 29, 279 |
| TasI | AATT | 1 cut(s) | 48 |
| TfiI | GAWTC | 1 cut(s) | 331 |
| TscAI | CASTG | 1 cut(s) | 162 |
| TseFI | GTSAC | 2 cut(s) | 166, 313 |
| TseI | GCWGC | 2 cut(s) | 176, 185 |
| Tsp45I | GTSAC | 2 cut(s) | 166, 313 |
| TspDTI | ATGAA | 1 cut(s) | 310 |
| TspRI | CASTG | 1 cut(s) | 162 |
| VpaK11BI | GGWCC | 1 cut(s) | 119 |
| XceI | RCATGY | 1 cut(s) | 12 |
| XmiI | GTMKAC | 1 cut(s) | 201 |
| XspI | CTAG | 4 cut(s) | 14, 164, 206, 239 |