Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G36100 AT3G11550 AT5G06200 |
| fragaria_vesca | FvH4_2g15060 FvH4_5g26140 FvH4_6g19500 |
| malus_domestica | MD12G1031100.v1.1 MD12G1031200.v1.1 MD14G1031600.v1.1 |
| prunus_persica | Prupe.7G101300_v2.0.a1 Prupe.8G014400_v2.0.a1 |
| pyrus_communis | pycom12g02910 pycom12g02920 |
| rosa_chinensis | RchiOBHm_Chr3g0474831 RchiOBHm_Chr6g0277661 RchiOBHm_Chr7g0216851 |
| rosa_laevigata | RLG00000002533 RLG00000013284 RLG00000023891 |
| rosa_multiflora | Rmu_sc0000125.1_g000011 Rmu_sc0004848.1_g000011 Rmu_sc0011900.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00242820 Rroxscaffold_6G00406810 |
| rosa_rugosa | Rorug03G0144500 Rorug06G0110500 Rorug07G0163700 |
| rosa_samantha | Rh3AG194000 Rh3BG223900 Rh3CG218800 Rh3DG219800 Rh6AG217000 Rh7AG303200 Rh7BG295100 Rh7CG321800 Rh7DG303700 |
| rosa_wichuraiana | Rw3G017670 Rw6G018930 Rw7G025790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 9 |
| AccI | GTMKAC | 1 cut(s) | 372 |
| AciI | CCGC | 1 cut(s) | 9 |
| AcoI | YGGCCR | 1 cut(s) | 129 |
| AfaI | GTAC | 1 cut(s) | 58 |
| AgsI | TTSAA | 2 cut(s) | 245, 285 |
| AluBI | AGCT | 3 cut(s) | 248, 252, 399 |
| AluI | AGCT | 3 cut(s) | 248, 252, 399 |
| AoxI | GGCC | 3 cut(s) | 10, 74, 129 |
| ApaI | GGGCCC | 1 cut(s) | 78 |
| ApeKI | GCWGC | 5 cut(s) | 179, 182, 185, 347, 356 |
| AspS9I | GGNCC | 3 cut(s) | 11, 74, 75 |
| AsuHPI | GGTGA | 3 cut(s) | 217, 443, 478 |
| AsuNHI | GCTAGC | 2 cut(s) | 248, 409 |
| BaeGI | GKGCMC | 1 cut(s) | 78 |
| BalI | TGGCCA | 1 cut(s) | 131 |
| BanII | GRGCYC | 1 cut(s) | 78 |
| BauI | CACGAG | 1 cut(s) | 44 |
| BbvI | GCAGC | 5 cut(s) | 166, 169, 172, 334, 343 |
| BccI | CCATC | 2 cut(s) | 121, 422 |
| BclI | TGATCA | 1 cut(s) | 205 |
| BfaI | CTAG | 5 cut(s) | 249, 267, 335, 377, 410 |
| BfmI | CTRYAG | 1 cut(s) | 162 |
| BisI | GCNGC | 6 cut(s) | 10, 180, 183, 186, 348, 357 |
| BlsI | GCNGC | 6 cut(s) | 11, 181, 184, 187, 349, 358 |
| BmgT120I | GGNCC | 3 cut(s) | 11, 74, 75 |
| BmiI | GGNNCC | 4 cut(s) | 13, 76, 90, 199 |
| BmrI | ACTGGG | 1 cut(s) | 223 |
| BmtI | GCTAGC | 2 cut(s) | 252, 413 |
| BmuI | ACTGGG | 1 cut(s) | 223 |
| BsaJI | CCNNGG | 1 cut(s) | 192 |
| Bse1I | ACTGG | 5 cut(s) | 201, 229, 238, 410, 424 |
| Bse3DI | GCAATG | 1 cut(s) | 397 |
| BseDI | CCNNGG | 1 cut(s) | 192 |
| BseGI | GGATG | 3 cut(s) | 59, 132, 362 |
| BseMI | GCAATG | 1 cut(s) | 397 |
| BseNI | ACTGG | 5 cut(s) | 201, 229, 238, 410, 424 |
| BseRI | GAGGAG | 1 cut(s) | 166 |
| BseSI | GKGCMC | 1 cut(s) | 78 |
| BseXI | GCAGC | 5 cut(s) | 166, 169, 172, 334, 343 |
| BseYI | CCCAGC | 1 cut(s) | 350 |
| BshFI | GGCC | 3 cut(s) | 12, 76, 131 |
| BsiSI | CCGG | 1 cut(s) | 442 |
| BsnI | GGCC | 3 cut(s) | 12, 76, 131 |
| Bsp120I | GGGCCC | 1 cut(s) | 74 |
| Bsp1286I | GDGCHC | 1 cut(s) | 78 |
| Bsp143I | GATC | 1 cut(s) | 205 |
| Bsp19I | CCATGG | 1 cut(s) | 192 |
| BspACI | CCGC | 1 cut(s) | 9 |
| BspANI | GGCC | 3 cut(s) | 12, 76, 131 |
| BspLI | GGNNCC | 4 cut(s) | 13, 76, 90, 199 |
| BspOI | GCTAGC | 2 cut(s) | 252, 413 |
| BsrBI | CCGCTC | 1 cut(s) | 9 |
| BsrDI | GCAATG | 1 cut(s) | 397 |
| BsrI | ACTGG | 5 cut(s) | 201, 229, 238, 410, 424 |
| BssECI | CCNNGG | 1 cut(s) | 192 |
| BssMI | GATC | 1 cut(s) | 205 |
| BssSI | CACGAG | 1 cut(s) | 44 |
| BssT1I | CCWWGG | 1 cut(s) | 192 |
| Bst2BI | CACGAG | 1 cut(s) | 44 |
| Bst4CI | ACNGT | 2 cut(s) | 88, 481 |
| Bst6I | CTCTTC | 1 cut(s) | 113 |
| BstC8I | GCNNGC | 3 cut(s) | 250, 397, 411 |
| BstDSI | CCRYGG | 1 cut(s) | 192 |
| BstF5I | GGATG | 3 cut(s) | 59, 132, 362 |
| BstKTI | GATC | 1 cut(s) | 208 |
| BstMBI | GATC | 1 cut(s) | 205 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 179, 185, 344, 353, 356, 396, 464 |
| BstNSI | RCATGY | 1 cut(s) | 265 |
| BstSFI | CTRYAG | 1 cut(s) | 162 |
| BstSLI | GKGCMC | 1 cut(s) | 78 |
| BstV1I | GCAGC | 5 cut(s) | 166, 169, 172, 334, 343 |
| BsuRI | GGCC | 3 cut(s) | 12, 76, 131 |
| BtgI | CCRYGG | 1 cut(s) | 192 |
| BtsCI | GGATG | 3 cut(s) | 59, 132, 362 |
| BtsIMutI | CAGTG | 2 cut(s) | 208, 326 |
| Cac8I | GCNNGC | 3 cut(s) | 250, 397, 411 |
| Cfr13I | GGNCC | 3 cut(s) | 11, 74, 75 |
| Csp6I | GTAC | 1 cut(s) | 57 |
| CviAII | CATG | 3 cut(s) | 193, 262, 493 |
| CviQI | GTAC | 1 cut(s) | 57 |
| DpnI | GATC | 1 cut(s) | 207 |
| DpnII | GATC | 1 cut(s) | 205 |
| EaeI | YGGCCR | 1 cut(s) | 129 |
| Eam1104I | CTCTTC | 1 cut(s) | 113 |
| EarI | CTCTTC | 1 cut(s) | 113 |
| Eco130I | CCWWGG | 1 cut(s) | 192 |
| Eco24I | GRGCYC | 1 cut(s) | 78 |
| EcoO109I | RGGNCCY | 1 cut(s) | 74 |
| EcoT14I | CCWWGG | 1 cut(s) | 192 |
| EcoT38I | GRGCYC | 1 cut(s) | 78 |
| ErhI | CCWWGG | 1 cut(s) | 192 |
| FaeI | CATG | 3 cut(s) | 196, 265, 496 |
| FaiI | YATR | 8 cut(s) | 134, 164, 194, 255, 263, 279, 368, 494 |
| FatI | CATG | 3 cut(s) | 192, 261, 492 |
| FbaI | TGATCA | 1 cut(s) | 205 |
| FblI | GTMKAC | 1 cut(s) | 372 |
| Fnu4HI | GCNGC | 6 cut(s) | 10, 180, 183, 186, 348, 357 |
| FokI | GGATG | 3 cut(s) | 46, 139, 349 |
| FriOI | GRGCYC | 1 cut(s) | 78 |
| Fsp4HI | GCNGC | 6 cut(s) | 10, 180, 183, 186, 348, 357 |
| FspBI | CTAG | 5 cut(s) | 249, 267, 335, 377, 410 |
| GluI | GCNGC | 6 cut(s) | 10, 180, 183, 186, 348, 357 |
| GsaI | CCCAGC | 1 cut(s) | 354 |
| HaeIII | GGCC | 3 cut(s) | 12, 76, 131 |
| HapII | CCGG | 1 cut(s) | 442 |
| Hin1II | CATG | 3 cut(s) | 196, 265, 496 |
| HinfI | GANTC | 3 cut(s) | 17, 331, 502 |
| HpaII | CCGG | 1 cut(s) | 442 |
| HphI | GGTGA | 3 cut(s) | 217, 443, 478 |
| Hpy166II | GTNNAC | 1 cut(s) | 373 |
| Hpy188I | TCNGA | 2 cut(s) | 84, 527 |
| Hpy188III | TCNNGA | 3 cut(s) | 44, 312, 499 |
| Hpy8I | GTNNAC | 1 cut(s) | 373 |
| HpyAV | CCTTC | 6 cut(s) | 95, 224, 229, 302, 481, 499 |
| HpyCH4III | ACNGT | 2 cut(s) | 88, 481 |
| HpyCH4IV | ACGT | 1 cut(s) | 447 |
| HpyCH4V | TGCA | 3 cut(s) | 359, 395, 420 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 179, 185, 344, 353, 356, 396, 464 |
| HpySE526I | ACGT | 1 cut(s) | 447 |
| Hsp92II | CATG | 3 cut(s) | 196, 265, 496 |
| Ksp22I | TGATCA | 1 cut(s) | 205 |
| Kzo9I | GATC | 1 cut(s) | 205 |
| LmnI | GCTCC | 1 cut(s) | 404 |
| LpnPI | CCDG | 8 cut(s) | 105, 214, 242, 251, 336, 391, 437, 455 |
| Lsp1109I | GCAGC | 5 cut(s) | 166, 169, 172, 334, 343 |
| MaeI | CTAG | 5 cut(s) | 249, 267, 335, 377, 410 |
| MaeII | ACGT | 1 cut(s) | 447 |
| MaeIII | GTNAC | 2 cut(s) | 475, 484 |
| MalI | GATC | 1 cut(s) | 207 |
| MbiI | CCGCTC | 1 cut(s) | 9 |
| MboI | GATC | 1 cut(s) | 205 |
| MboII | GAAGA | 5 cut(s) | 16, 130, 214, 226, 280 |
| MhlI | GDGCHC | 1 cut(s) | 78 |
| MlsI | TGGCCA | 1 cut(s) | 131 |
| MluCI | AATT | 1 cut(s) | 135 |
| MluNI | TGGCCA | 1 cut(s) | 131 |
| MlyI | GAGTC | 2 cut(s) | 11, 325 |
| MmeI | TCCRAC | 1 cut(s) | 426 |
| MnlI | CCTC | 4 cut(s) | 40, 104, 116, 144 |
| Mox20I | TGGCCA | 1 cut(s) | 131 |
| MscI | TGGCCA | 1 cut(s) | 131 |
| MslI | CAYNNNNRTG | 1 cut(s) | 491 |
| Msp20I | TGGCCA | 1 cut(s) | 131 |
| MspI | CCGG | 1 cut(s) | 442 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 179, 185, 344, 353, 356, 396, 464 |
| NcoI | CCATGG | 1 cut(s) | 192 |
| NdeII | GATC | 1 cut(s) | 205 |
| NheI | GCTAGC | 2 cut(s) | 248, 409 |
| NlaIII | CATG | 3 cut(s) | 196, 265, 496 |
| NlaIV | GGNNCC | 4 cut(s) | 13, 76, 90, 199 |
| NmuCI | GTSAC | 1 cut(s) | 484 |
| NspI | RCATGY | 1 cut(s) | 265 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 480 |
| PfeI | GAWTC | 1 cut(s) | 502 |
| PkrI | GCNGC | 6 cut(s) | 11, 181, 184, 187, 349, 358 |
| PleI | GAGTC | 2 cut(s) | 11, 325 |
| PpsI | GAGTC | 2 cut(s) | 11, 325 |
| PspFI | CCCAGC | 1 cut(s) | 350 |
| PspN4I | GGNNCC | 4 cut(s) | 13, 76, 90, 199 |
| PspOMI | GGGCCC | 1 cut(s) | 74 |
| PspPI | GGNCC | 3 cut(s) | 11, 74, 75 |
| RsaI | GTAC | 1 cut(s) | 58 |
| RsaNI | GTAC | 1 cut(s) | 57 |
| RseI | CAYNNNNRTG | 1 cut(s) | 491 |
| SatI | GCNGC | 6 cut(s) | 10, 180, 183, 186, 348, 357 |
| Sau3AI | GATC | 1 cut(s) | 205 |
| Sau96I | GGNCC | 3 cut(s) | 11, 74, 75 |
| SchI | GAGTC | 2 cut(s) | 11, 325 |
| SduI | GDGCHC | 1 cut(s) | 78 |
| SetI | ASST | 7 cut(s) | 216, 250, 254, 378, 401, 450, 491 |
| SfcI | CTRYAG | 1 cut(s) | 162 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 491 |
| Sse9I | AATT | 1 cut(s) | 135 |
| SsiI | CCGC | 1 cut(s) | 9 |
| SspMI | CTAG | 5 cut(s) | 249, 267, 335, 377, 410 |
| StyI | CCWWGG | 1 cut(s) | 192 |
| TaaI | ACNGT | 2 cut(s) | 88, 481 |
| TaiI | ACGT | 1 cut(s) | 450 |
| TaqI | TCGA | 2 cut(s) | 20, 313 |
| TasI | AATT | 1 cut(s) | 135 |
| TauI | GCSGC | 1 cut(s) | 12 |
| TfiI | GAWTC | 1 cut(s) | 502 |
| TscAI | CASTG | 2 cut(s) | 208, 333 |
| TseFI | GTSAC | 1 cut(s) | 484 |
| TseI | GCWGC | 5 cut(s) | 179, 182, 185, 347, 356 |
| Tsp45I | GTSAC | 1 cut(s) | 484 |
| TspDTI | ATGAA | 3 cut(s) | 17, 131, 481 |
| TspRI | CASTG | 2 cut(s) | 208, 333 |
| XceI | RCATGY | 1 cut(s) | 265 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 139 |
| XmiI | GTMKAC | 1 cut(s) | 372 |
| XspI | CTAG | 5 cut(s) | 249, 267, 335, 377, 410 |