Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G36100 AT3G11550 AT5G06200 |
| fragaria_vesca | FvH4_2g15060 FvH4_5g26140 FvH4_6g19500 |
| malus_domestica | MD12G1031100.v1.1 MD12G1031200.v1.1 MD14G1031600.v1.1 |
| prunus_persica | Prupe.7G101300_v2.0.a1 Prupe.8G014400_v2.0.a1 |
| pyrus_communis | pycom12g02910 pycom12g02920 |
| rosa_chinensis | RchiOBHm_Chr3g0474831 RchiOBHm_Chr6g0277661 RchiOBHm_Chr7g0216851 |
| rosa_laevigata | RLG00000002533 RLG00000013284 RLG00000023891 |
| rosa_multiflora | Rmu_sc0000125.1_g000011 Rmu_sc0004848.1_g000011 Rmu_sc0011900.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00242820 Rroxscaffold_6G00406810 |
| rosa_rugosa | Rorug03G0144500 Rorug06G0110500 Rorug07G0163700 |
| rosa_samantha | Rh3AG194000 Rh3BG223900 Rh3CG218800 Rh3DG219800 Rh6AG217000 Rh7AG303200 Rh7BG295100 Rh7CG321800 Rh7DG303700 |
| rosa_wichuraiana | Rw3G017670 Rw6G018930 Rw7G025790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 320 |
| AccII | CGCG | 2 cut(s) | 182, 572 |
| AciI | CCGC | 6 cut(s) | 15, 180, 182, 452, 546, 572 |
| AcyI | GRCGYC | 1 cut(s) | 321 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 259 |
| AgsI | TTSAA | 2 cut(s) | 24, 430 |
| AjnI | CCWGG | 1 cut(s) | 258 |
| AluBI | AGCT | 1 cut(s) | 101 |
| AluI | AGCT | 1 cut(s) | 101 |
| Alw21I | GWGCWC | 1 cut(s) | 11 |
| ApeKI | GCWGC | 5 cut(s) | 98, 185, 197, 443, 455 |
| AspLEI | GCGC | 5 cut(s) | 176, 197, 323, 421, 551 |
| AsuHPI | GGTGA | 2 cut(s) | 29, 536 |
| BanI | GGYRCC | 1 cut(s) | 320 |
| Bbv12I | GWGCWC | 1 cut(s) | 11 |
| BbvI | GCAGC | 5 cut(s) | 110, 172, 184, 430, 442 |
| BccI | CCATC | 1 cut(s) | 123 |
| BciT130I | CCWGG | 1 cut(s) | 260 |
| BciVI | GTATCC | 1 cut(s) | 84 |
| BclI | TGATCA | 1 cut(s) | 115 |
| BfaI | CTAG | 5 cut(s) | 12, 191, 216, 264, 329 |
| BfoI | RGCGCY | 5 cut(s) | 177, 198, 324, 422, 552 |
| BfuI | GTATCC | 1 cut(s) | 84 |
| BisI | GCNGC | 8 cut(s) | 99, 183, 186, 198, 444, 453, 456, 547 |
| BlsI | GCNGC | 8 cut(s) | 100, 184, 187, 199, 445, 454, 457, 548 |
| Bme1390I | CCNGG | 1 cut(s) | 260 |
| BmiI | GGNNCC | 1 cut(s) | 322 |
| BmrFI | CCNGG | 1 cut(s) | 260 |
| BmsI | GCATC | 1 cut(s) | 481 |
| BsaHI | GRCGYC | 1 cut(s) | 321 |
| BsaJI | CCNNGG | 3 cut(s) | 180, 207, 386 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 259 |
| Bse3DI | GCAATG | 1 cut(s) | 201 |
| BseBI | CCWGG | 1 cut(s) | 260 |
| BseDI | CCNNGG | 3 cut(s) | 180, 207, 386 |
| BseGI | GGATG | 2 cut(s) | 103, 134 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 259 |
| BseMI | GCAATG | 1 cut(s) | 201 |
| BseMII | CTCAG | 1 cut(s) | 178 |
| BseXI | GCAGC | 5 cut(s) | 110, 172, 184, 430, 442 |
| BsgI | GTGCAG | 1 cut(s) | 597 |
| Bsh1236I | CGCG | 2 cut(s) | 182, 572 |
| BshNI | GGYRCC | 1 cut(s) | 320 |
| BsiHKAI | GWGCWC | 1 cut(s) | 11 |
| BslFI | GGGAC | 2 cut(s) | 322, 354 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 259 |
| BsmFI | GGGAC | 2 cut(s) | 322, 354 |
| Bsp1286I | GDGCHC | 1 cut(s) | 11 |
| Bsp143I | GATC | 1 cut(s) | 115 |
| Bsp19I | CCATGG | 1 cut(s) | 207 |
| BspACI | CCGC | 6 cut(s) | 15, 180, 182, 452, 546, 572 |
| BspCNI | CTCAG | 1 cut(s) | 177 |
| BspFNI | CGCG | 2 cut(s) | 182, 572 |
| BspLI | GGNNCC | 1 cut(s) | 322 |
| BspT107I | GGYRCC | 1 cut(s) | 320 |
| BsrDI | GCAATG | 1 cut(s) | 201 |
| BssECI | CCNNGG | 3 cut(s) | 180, 207, 386 |
| BssMI | GATC | 1 cut(s) | 115 |
| BssNI | GRCGYC | 1 cut(s) | 321 |
| BssT1I | CCWWGG | 2 cut(s) | 207, 386 |
| Bst2UI | CCWGG | 1 cut(s) | 260 |
| Bst4CI | ACNGT | 2 cut(s) | 61, 246 |
| Bst6I | CTCTTC | 1 cut(s) | 234 |
| BstACI | GRCGYC | 1 cut(s) | 321 |
| BstC8I | GCNNGC | 3 cut(s) | 221, 504, 536 |
| BstDEI | CTNAG | 1 cut(s) | 164 |
| BstDSI | CCRYGG | 2 cut(s) | 180, 207 |
| BstF5I | GGATG | 2 cut(s) | 103, 134 |
| BstFNI | CGCG | 2 cut(s) | 182, 572 |
| BstH2I | RGCGCY | 5 cut(s) | 177, 198, 324, 422, 552 |
| BstHHI | GCGC | 5 cut(s) | 176, 197, 323, 421, 551 |
| BstKTI | GATC | 1 cut(s) | 118 |
| BstMBI | GATC | 1 cut(s) | 115 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 182, 194, 203, 397, 449, 452, 569 |
| BstNI | CCWGG | 1 cut(s) | 260 |
| BstSCI | CCNGG | 1 cut(s) | 258 |
| BstUI | CGCG | 2 cut(s) | 182, 572 |
| BstV1I | GCAGC | 5 cut(s) | 110, 172, 184, 430, 442 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 208, 521 |
| BsuI | GTATCC | 1 cut(s) | 84 |
| BtgI | CCRYGG | 2 cut(s) | 180, 207 |
| BtsCI | GGATG | 2 cut(s) | 103, 134 |
| Cac8I | GCNNGC | 3 cut(s) | 221, 504, 536 |
| CfoI | GCGC | 5 cut(s) | 176, 197, 323, 421, 551 |
| Cfr42I | CCGCGG | 1 cut(s) | 183 |
| CviAII | CATG | 5 cut(s) | 109, 113, 208, 289, 374 |
| CviJI | RGCY | 9 cut(s) | 101, 169, 185, 263, 391, 455, 473, 502, 563 |
| CviKI_1 | RGCY | 9 cut(s) | 101, 169, 185, 263, 391, 455, 473, 502, 563 |
| DdeI | CTNAG | 1 cut(s) | 164 |
| DinI | GGCGCC | 1 cut(s) | 322 |
| DpnI | GATC | 1 cut(s) | 117 |
| DpnII | GATC | 1 cut(s) | 115 |
| Eam1104I | CTCTTC | 1 cut(s) | 234 |
| EarI | CTCTTC | 1 cut(s) | 234 |
| Eco130I | CCWWGG | 2 cut(s) | 207, 386 |
| EcoRII | CCWGG | 1 cut(s) | 258 |
| EcoT14I | CCWWGG | 2 cut(s) | 207, 386 |
| EcoT22I | ATGCAT | 1 cut(s) | 114 |
| EgeI | GGCGCC | 1 cut(s) | 322 |
| EheI | GGCGCC | 1 cut(s) | 322 |
| ErhI | CCWWGG | 2 cut(s) | 207, 386 |
| FaeI | CATG | 5 cut(s) | 112, 116, 211, 292, 377 |
| FaqI | GGGAC | 2 cut(s) | 322, 354 |
| FatI | CATG | 5 cut(s) | 108, 112, 207, 288, 373 |
| FauNDI | CATATG | 1 cut(s) | 82 |
| FbaI | TGATCA | 1 cut(s) | 115 |
| Fnu4HI | GCNGC | 8 cut(s) | 99, 183, 186, 198, 444, 453, 456, 547 |
| FokI | GGATG | 2 cut(s) | 90, 141 |
| Fsp4HI | GCNGC | 8 cut(s) | 99, 183, 186, 198, 444, 453, 456, 547 |
| FspBI | CTAG | 5 cut(s) | 12, 191, 216, 264, 329 |
| GlaI | GCGC | 5 cut(s) | 175, 196, 322, 420, 550 |
| GluI | GCNGC | 8 cut(s) | 99, 183, 186, 198, 444, 453, 456, 547 |
| HaeII | RGCGCY | 5 cut(s) | 177, 198, 324, 422, 552 |
| HhaI | GCGC | 5 cut(s) | 176, 197, 323, 421, 551 |
| Hin1I | GRCGYC | 1 cut(s) | 321 |
| Hin1II | CATG | 5 cut(s) | 112, 116, 211, 292, 377 |
| Hin6I | GCGC | 5 cut(s) | 174, 195, 321, 419, 549 |
| HinP1I | GCGC | 5 cut(s) | 174, 195, 321, 419, 549 |
| HinfI | GANTC | 3 cut(s) | 20, 44, 595 |
| HphI | GGTGA | 2 cut(s) | 29, 536 |
| Hpy166II | GTNNAC | 1 cut(s) | 466 |
| Hpy188I | TCNGA | 3 cut(s) | 43, 490, 620 |
| Hpy188III | TCNNGA | 2 cut(s) | 48, 592 |
| Hpy8I | GTNNAC | 1 cut(s) | 466 |
| Hpy99I | CGWCG | 1 cut(s) | 572 |
| HpyAV | CCTTC | 3 cut(s) | 130, 355, 574 |
| HpyCH4III | ACNGT | 2 cut(s) | 61, 246 |
| HpyCH4IV | ACGT | 1 cut(s) | 425 |
| HpyCH4V | TGCA | 4 cut(s) | 112, 377, 494, 614 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 182, 194, 203, 397, 449, 452, 569 |
| HpyF3I | CTNAG | 1 cut(s) | 164 |
| HpySE526I | ACGT | 1 cut(s) | 425 |
| Hsp92I | GRCGYC | 1 cut(s) | 321 |
| Hsp92II | CATG | 5 cut(s) | 112, 116, 211, 292, 377 |
| HspAI | GCGC | 5 cut(s) | 174, 195, 321, 419, 549 |
| KasI | GGCGCC | 1 cut(s) | 320 |
| Ksp22I | TGATCA | 1 cut(s) | 115 |
| KspI | CCGCGG | 1 cut(s) | 183 |
| Kzo9I | GATC | 1 cut(s) | 115 |
| LmnI | GCTCC | 1 cut(s) | 388 |
| LpnPI | CCDG | 7 cut(s) | 151, 245, 272, 347, 401, 548, 556 |
| Lsp1109I | GCAGC | 5 cut(s) | 110, 172, 184, 430, 442 |
| LweI | GCATC | 1 cut(s) | 481 |
| MaeI | CTAG | 5 cut(s) | 12, 191, 216, 264, 329 |
| MaeII | ACGT | 1 cut(s) | 425 |
| MaeIII | GTNAC | 1 cut(s) | 355 |
| MalI | GATC | 1 cut(s) | 117 |
| MboI | GATC | 1 cut(s) | 115 |
| MboII | GAAGA | 5 cut(s) | 16, 145, 221, 229, 241 |
| MhlI | GDGCHC | 1 cut(s) | 11 |
| MluCI | AATT | 5 cut(s) | 30, 254, 484, 496, 518 |
| Mly113I | GGCGCC | 1 cut(s) | 321 |
| MlyI | GAGTC | 1 cut(s) | 53 |
| MnlI | CCTC | 2 cut(s) | 81, 119 |
| Mph1103I | ATGCAT | 1 cut(s) | 114 |
| MseI | TTAA | 2 cut(s) | 33, 628 |
| MslI | CAYNNNNRTG | 2 cut(s) | 206, 305 |
| MspA1I | CMGCKG | 2 cut(s) | 182, 546 |
| MspR9I | CCNGG | 1 cut(s) | 260 |
| MvaI | CCWGG | 1 cut(s) | 260 |
| MvnI | CGCG | 2 cut(s) | 182, 572 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 182, 194, 203, 397, 449, 452, 569 |
| NarI | GGCGCC | 1 cut(s) | 321 |
| NcoI | CCATGG | 1 cut(s) | 207 |
| NdeI | CATATG | 1 cut(s) | 82 |
| NdeII | GATC | 1 cut(s) | 115 |
| NlaIII | CATG | 5 cut(s) | 112, 116, 211, 292, 377 |
| NlaIV | GGNNCC | 1 cut(s) | 322 |
| NsiI | ATGCAT | 1 cut(s) | 114 |
| PfeI | GAWTC | 2 cut(s) | 20, 595 |
| PkrI | GCNGC | 8 cut(s) | 100, 184, 187, 199, 445, 454, 457, 548 |
| PleI | GAGTC | 1 cut(s) | 52 |
| PluTI | GGCGCC | 1 cut(s) | 324 |
| PpsI | GAGTC | 1 cut(s) | 52 |
| Psp6I | CCWGG | 1 cut(s) | 258 |
| PspGI | CCWGG | 1 cut(s) | 258 |
| PspN4I | GGNNCC | 1 cut(s) | 322 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 348, 380 |
| RseI | CAYNNNNRTG | 2 cut(s) | 206, 305 |
| SacII | CCGCGG | 1 cut(s) | 183 |
| SaqAI | TTAA | 2 cut(s) | 33, 628 |
| SatI | GCNGC | 8 cut(s) | 99, 183, 186, 198, 444, 453, 456, 547 |
| Sau3AI | GATC | 1 cut(s) | 115 |
| SchI | GAGTC | 1 cut(s) | 53 |
| ScrFI | CCNGG | 1 cut(s) | 260 |
| SduI | GDGCHC | 1 cut(s) | 11 |
| SetI | ASST | 3 cut(s) | 103, 330, 428 |
| SfaNI | GCATC | 1 cut(s) | 481 |
| SfoI | GGCGCC | 1 cut(s) | 322 |
| Sfr303I | CCGCGG | 1 cut(s) | 183 |
| SgrBI | CCGCGG | 1 cut(s) | 183 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 206, 305 |
| Sse9I | AATT | 5 cut(s) | 30, 254, 484, 496, 518 |
| SsiI | CCGC | 6 cut(s) | 15, 180, 182, 452, 546, 572 |
| SspDI | GGCGCC | 1 cut(s) | 320 |
| SspMI | CTAG | 5 cut(s) | 12, 191, 216, 264, 329 |
| StyD4I | CCNGG | 1 cut(s) | 258 |
| StyI | CCWWGG | 2 cut(s) | 207, 386 |
| TaaI | ACNGT | 2 cut(s) | 61, 246 |
| TaiI | ACGT | 1 cut(s) | 428 |
| TaqI | TCGA | 1 cut(s) | 153 |
| TasI | AATT | 5 cut(s) | 30, 254, 484, 496, 518 |
| TauI | GCSGC | 3 cut(s) | 185, 455, 549 |
| TfiI | GAWTC | 2 cut(s) | 20, 595 |
| Tru1I | TTAA | 2 cut(s) | 33, 628 |
| Tru9I | TTAA | 2 cut(s) | 33, 628 |
| TseI | GCWGC | 5 cut(s) | 98, 185, 197, 443, 455 |
| TspDTI | ATGAA | 3 cut(s) | 17, 148, 277 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 466, 550 |
| XspI | CTAG | 5 cut(s) | 12, 191, 216, 264, 329 |
| Zsp2I | ATGCAT | 1 cut(s) | 114 |