Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003368

Physical Location & Seq

Genomic Coordinates Forward (+)

16205666 .. 16209933

Gene Structure 4268 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G150700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1080 bp

ATGAAAGCAGGGGTGTTTTCTGGGCCAACAAAAATGGGGACAGGGGAAGAGGGCACGCCTTCTAAGCCTTCCAAACAAGCTTCTACAGCTCAGGAAATACCAACAACACCTTCATATCCGGATTGGTCCAGCTCTATGCAGGCTTATTATGGTCCTGGAGCTACTCCACCTCCCTTTTTCGCCTCTACTGTTGCTTCCCCAACTCCACATCCCTATATGTGGGGAGCCCAACATCCTATGATGCCGCCATATGGAACTCCAGTTCCGTACCCAGCCATGTATCCTCCAGGTGGAGTTTATGCTCATCCTAGTATGGTCGCGACTCCAGCCTCAGCACAGACAAATCCAGAGTTGGAAGGGAAGGGCCCAGATGGGAAAGAGCGGGTTTCAACCAAAAAACCCAAGGGAACTGCAGGAAATACAGGTTTGGTTGGTGGCAAGGCTGGGGAGAGTGGAAAAGCAACTTCAGGTTCAGGAAATGATGGCGCTTCACAAAGTGGTGAAAGTGGTAGTGAGGGTTCATCAGATGGCAGTGAAGATAATGCTAACCAACAGGAGTATGGTGCAAACAAGAGGGGAAGCTTTGACAAGATGCTTGCAGATGGAGCAAATGCACAGAATACTGGGGCAAATGTTCAAGCTTCAGTGCCTGGGAAGCCTGTCTCTATGCCTGCTACTAATCTGAATATCGGAATGGACTTATGGAATTCAACCCCTGCAGGTGCTGGAGGAGCAAAAATGAGAGCAAATCCATCAGGAGCTCCATCAGCTGCGGGTGCTGACCACTGGATTCAAGACGAACGTGAACTGAAAAGACAGAAAAGAAAGCAATCAAATAGGGAGTCAGCTAGGAGGTCAAGATTACGGAAGCAGGCGGAGTGTGAAGAGCTACAAGCAAGGGTGGAGACATTGAGCAATGAGAATCATAACCTTAGAGATGAACTGCACAGGCTCTCAGAAGAATGCGAGAAACTCACATCTGAGAATACTAATATAAAGGAAGAGTTGACACGAGTGTGCGGACCAGATTTCGTAGCAAACCTTGAGCAGCAGCCTGGTGGTGGTGAGGGCAACAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFMR MFMR_assoc bZIP_1

Protein Analysis

360

Amino Acids

37.62

Weight (kDa)

5.95

Isoelectric Point (pI)

52.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36730 AT4G36730
fragaria_vesca	FvH4_1g13880 FvH4_1g13880 FvH4_1g13880 FvH4_1g13880 FvH4_1g13880
malus_domestica	MD15G1266700.v1.1
prunus_persica	Prupe.7G150700_v2.0.a1 Prupe.7G150700_v2.0.a1 Prupe.7G150700_v2.0.a1 Prupe.7G150700_v2.0.a1 Prupe.7G150700_v2.0.a1 Prupe.7G150700_v2.0.a1
pyrus_communis	pycom02g11970 pycom15g23210
rosa_chinensis	RchiOBHm_Chr2g0102191
rosa_laevigata	RLG00000017087 RLG00000017137
rosa_multiflora	Rmu_co8040408.1_g000001 Rmu_co8264951.1_g000001 Rmu_sc0010937.1_g000010 Rmu_sc0011183.1_g000011 Rmu_sc0020365.1_g000005
rosa_roxburghii	Rroxscaffold_2G00140700 Rroxscaffold_2G00140710 Rroxscaffold_2G00141220
rosa_rugosa	Rorug02G0105200 Rorug02G0105300 Rorug02G0105300 Rorug02G0105300
rosa_samantha	Rh2AG153400 Rh2BG159300 Rh2CG158800 Rh2DG159000
rosa_wichuraiana	Rw2G011980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	710
Acc36I	ACCTGC	1 cut(s)	710
AccBSI	CCGCTC	1 cut(s)	382
AccII	CGCG	1 cut(s)	320
AccIII	TCCGGA	1 cut(s)	118
AciI	CCGC	5 cut(s)	245, 382, 773, 875, 1020
AcsI	RAATTY	1 cut(s)	706
AcuI	CTGAAG	2 cut(s)	450, 627
AdeI	CACNNNGTG	1 cut(s)	497
AfaI	GTAC	1 cut(s)	269
AfiI	CCNNNNNNNGG	4 cut(s)	219, 251, 290, 1061
AgsI	TTSAA	4 cut(s)	390, 638, 711, 794
AjnI	CCWGG	4 cut(s)	154, 286, 649, 1054
AjuI	GAANNNNNNNTTGG	2 cut(s)	94, 126
AleI	CACNNNNGTG	1 cut(s)	1015
AloI	GAACNNNNNNTCC	4 cut(s)	246, 247, 278, 279
Alw21I	GWGCWC	1 cut(s)	763
Alw26I	GTCTC	2 cut(s)	667, 899
AlwNI	CAGNNNCTG	2 cut(s)	650, 725
Aor13HI	TCCGGA	1 cut(s)	118
AoxI	GGCC	2 cut(s)	23, 364
ApaI	GGGCCC	1 cut(s)	368
ApeKI	GCWGC	3 cut(s)	770, 1048, 1051
ApoI	RAATTY	1 cut(s)	706
ArsI	GACNNNNNNTTYG	2 cut(s)	827, 859
AspLEI	GCGC	1 cut(s)	488
AspS9I	GGNCC	6 cut(s)	23, 126, 152, 364, 365, 1022
AsuHPI	GGTGA	2 cut(s)	512, 1076
AvaII	GGWCC	3 cut(s)	126, 152, 1022
BaeGI	GKGCMC	2 cut(s)	56, 368
BanII	GRGCYC	3 cut(s)	229, 368, 763
BauI	CACGAG	1 cut(s)	1011
Bbv12I	GWGCWC	1 cut(s)	763
BbvCI	CCTCAGC	1 cut(s)	331
BbvI	GCAGC	3 cut(s)	757, 1060, 1063
BccI	CCATC	6 cut(s)	365, 476, 521, 596, 760, 772
BciT130I	CCWGG	4 cut(s)	156, 288, 651, 1056
BciVI	GTATCC	1 cut(s)	291
BcoDI	GTCTC	2 cut(s)	667, 899
BfaI	CTAG	2 cut(s)	309, 849
BfmI	CTRYAG	3 cut(s)	84, 411, 717
BfoI	RGCGCY	1 cut(s)	489
BfuAI	ACCTGC	1 cut(s)	710
BfuI	GTATCC	1 cut(s)	291
BisI	GCNGC	4 cut(s)	245, 771, 1049, 1052
BlsI	GCNGC	4 cut(s)	246, 772, 1050, 1053
Bme1390I	CCNGG	4 cut(s)	156, 288, 651, 1056
Bme18I	GGWCC	3 cut(s)	126, 152, 1022
BmgT120I	GGNCC	6 cut(s)	23, 126, 152, 364, 365, 1022
BmiI	GGNNCC	2 cut(s)	226, 366
BmrFI	CCNGG	4 cut(s)	156, 288, 651, 1056
BmrI	ACTGGG	1 cut(s)	633
BmsI	GCATC	2 cut(s)	231, 582
BmuI	ACTGGG	1 cut(s)	633
BpmI	CTGGAG	5 cut(s)	177, 243, 270, 309, 747
Bpu10I	CCTNAGC	2 cut(s)	90, 331
BpuEI	CTTGAG	1 cut(s)	1064
BsaJI	CCNNGG	2 cut(s)	402, 650
BsaWI	WCCGGW	1 cut(s)	118
BsaXI	ACNNNNNCTCC	2 cut(s)	154, 184
Bsc4I	CCNNNNNNNGG	4 cut(s)	219, 251, 290, 1061
Bse1I	ACTGG	3 cut(s)	260, 628, 791
Bse3DI	GCAATG	1 cut(s)	922
BseAI	TCCGGA	1 cut(s)	118
BseBI	CCWGG	4 cut(s)	156, 288, 651, 1056
BseDI	CCNNGG	2 cut(s)	402, 650
BseGI	GGATG	3 cut(s)	208, 232, 304
BseLI	CCNNNNNNNGG	4 cut(s)	219, 251, 290, 1061
BseMI	GCAATG	1 cut(s)	922
BseMII	CTCAG	4 cut(s)	104, 345, 969, 972
BseNI	ACTGG	3 cut(s)	260, 628, 791
BseRI	GAGGAG	1 cut(s)	744
BseSI	GKGCMC	2 cut(s)	56, 368
BseXI	GCAGC	3 cut(s)	757, 1060, 1063
BseYI	CCCAGC	2 cut(s)	271, 443
BsgI	GTGCAG	1 cut(s)	929
Bsh1236I	CGCG	1 cut(s)	320
BshFI	GGCC	2 cut(s)	25, 366
BsiHKAI	GWGCWC	1 cut(s)	763
BsiSI	CCGG	1 cut(s)	119
BslFI	GGGAC	1 cut(s)	52
BslI	CCNNNNNNNGG	4 cut(s)	219, 251, 290, 1061
BsmAI	GTCTC	2 cut(s)	667, 899
BsmFI	GGGAC	1 cut(s)	52
BsmI	GAATGC	1 cut(s)	968
BsnI	GGCC	2 cut(s)	25, 366
Bsp120I	GGGCCC	1 cut(s)	364
Bsp1286I	GDGCHC	4 cut(s)	56, 229, 368, 763
Bsp13I	TCCGGA	1 cut(s)	118
Bsp68I	TCGCGA	1 cut(s)	320
BspACI	CCGC	5 cut(s)	245, 382, 773, 875, 1020
BspANI	GGCC	2 cut(s)	25, 366
BspCNI	CTCAG	4 cut(s)	103, 344, 968, 973
BspEI	TCCGGA	1 cut(s)	118
BspFNI	CGCG	1 cut(s)	320
BspLI	GGNNCC	2 cut(s)	226, 366
BspMAI	CTGCAG	2 cut(s)	415, 721
BspMI	ACCTGC	1 cut(s)	710
BspQI	GCTCTTC	1 cut(s)	879
BsrBI	CCGCTC	1 cut(s)	382
BsrDI	GCAATG	1 cut(s)	922
BsrI	ACTGG	3 cut(s)	260, 628, 791
BssECI	CCNNGG	2 cut(s)	402, 650
BssSI	CACGAG	1 cut(s)	1011
BssT1I	CCWWGG	1 cut(s)	402
Bst2BI	CACGAG	1 cut(s)	1011
Bst2UI	CCWGG	4 cut(s)	156, 288, 651, 1056
Bst4CI	ACNGT	2 cut(s)	190, 1076
Bst6I	CTCTTC	3 cut(s)	42, 879, 996
BstC8I	GCNNGC	5 cut(s)	56, 141, 597, 672, 873
BstDEI	CTNAG	6 cut(s)	63, 90, 331, 932, 955, 981
BstF5I	GGATG	3 cut(s)	208, 232, 304
BstFNI	CGCG	1 cut(s)	320
BstH2I	RGCGCY	1 cut(s)	489
BstHHI	GCGC	1 cut(s)	488
BstMAI	GTCTC	2 cut(s)	667, 899
BstMWI	GCNNNNNNNGC	8 cut(s)	64, 86, 326, 605, 655, 731, 767, 776
BstNI	CCWGG	4 cut(s)	156, 288, 651, 1056
BstSCI	CCNGG	4 cut(s)	154, 286, 649, 1054
BstSFI	CTRYAG	3 cut(s)	84, 411, 717
BstSLI	GKGCMC	2 cut(s)	56, 368
BstUI	CGCG	1 cut(s)	320
BstV1I	GCAGC	3 cut(s)	757, 1060, 1063
BsuI	GTATCC	1 cut(s)	291
BsuRI	GGCC	2 cut(s)	25, 366
BtsCI	GGATG	3 cut(s)	208, 232, 304
BtsI	GCAGTG	1 cut(s)	538
BtsIMutI	CAGTG	3 cut(s)	538, 651, 784
BtuMI	TCGCGA	1 cut(s)	320
BveI	ACCTGC	1 cut(s)	710
Cac8I	GCNNGC	5 cut(s)	56, 141, 597, 672, 873
CaiI	CAGNNNCTG	2 cut(s)	650, 725
CfoI	GCGC	1 cut(s)	488
Cfr13I	GGNCC	6 cut(s)	23, 126, 152, 364, 365, 1022
Csp6I	GTAC	1 cut(s)	268
CviAII	CATG	1 cut(s)	277
CviQI	GTAC	1 cut(s)	268
DdeI	CTNAG	6 cut(s)	63, 90, 331, 932, 955, 981
DraIII	CACNNNGTG	1 cut(s)	497
Eam1104I	CTCTTC	3 cut(s)	42, 879, 996
EarI	CTCTTC	3 cut(s)	42, 879, 996
EciI	GGCGGA	1 cut(s)	890
Ecl136II	GAGCTC	1 cut(s)	761
Eco130I	CCWWGG	1 cut(s)	402
Eco24I	GRGCYC	3 cut(s)	229, 368, 763
Eco47I	GGWCC	3 cut(s)	126, 152, 1022
Eco53kI	GAGCTC	1 cut(s)	761
Eco57I	CTGAAG	2 cut(s)	450, 627
EcoICRI	GAGCTC	1 cut(s)	761
EcoO109I	RGGNCCY	1 cut(s)	364
EcoRI	GAATTC	1 cut(s)	706
EcoRII	CCWGG	4 cut(s)	154, 286, 649, 1054
EcoT14I	CCWWGG	1 cut(s)	402
EcoT38I	GRGCYC	3 cut(s)	229, 368, 763
ErhI	CCWWGG	1 cut(s)	402
FaeI	CATG	1 cut(s)	280
FaqI	GGGAC	1 cut(s)	52
FatI	CATG	1 cut(s)	276
FauI	CCCGC	2 cut(s)	375, 766
FauNDI	CATATG	1 cut(s)	250
Fnu4HI	GCNGC	4 cut(s)	245, 771, 1049, 1052
FokI	GGATG	3 cut(s)	195, 219, 291
FriOI	GRGCYC	3 cut(s)	229, 368, 763
Fsp4HI	GCNGC	4 cut(s)	245, 771, 1049, 1052
FspBI	CTAG	2 cut(s)	309, 849
GlaI	GCGC	1 cut(s)	487
GluI	GCNGC	4 cut(s)	245, 771, 1049, 1052
GsaI	CCCAGC	2 cut(s)	275, 447
GsuI	CTGGAG	5 cut(s)	177, 243, 270, 309, 747
HaeII	RGCGCY	1 cut(s)	489
HaeIII	GGCC	2 cut(s)	25, 366
HapII	CCGG	1 cut(s)	119
HhaI	GCGC	1 cut(s)	488
Hin1II	CATG	1 cut(s)	280
Hin6I	GCGC	1 cut(s)	486
HinP1I	GCGC	1 cut(s)	486
HincII	GTYRAC	1 cut(s)	1008
HindII	GTYRAC	1 cut(s)	1008
HindIII	AAGCTT	3 cut(s)	78, 580, 639
HinfI	GANTC	4 cut(s)	322, 790, 842, 922
HpaII	CCGG	1 cut(s)	119
HphI	GGTGA	2 cut(s)	512, 1076
Hpy166II	GTNNAC	2 cut(s)	806, 1008
Hpy188I	TCNGA	5 cut(s)	526, 684, 692, 958, 982
Hpy188III	TCNNGA	8 cut(s)	92, 119, 319, 347, 474, 756, 794, 858
Hpy8I	GTNNAC	2 cut(s)	806, 1008
HpyAV	CCTTC	5 cut(s)	69, 78, 120, 350, 355
HpyCH4III	ACNGT	2 cut(s)	190, 1076
HpyCH4IV	ACGT	1 cut(s)	802
HpyCH4V	TGCA	7 cut(s)	139, 413, 566, 599, 614, 719, 946
HpyF10VI	GCNNNNNNNGC	8 cut(s)	64, 86, 326, 605, 655, 731, 767, 776
HpyF3I	CTNAG	6 cut(s)	63, 90, 331, 932, 955, 981
HpySE526I	ACGT	1 cut(s)	802
Hsp92II	CATG	1 cut(s)	280
HspAI	GCGC	1 cut(s)	486
Kpn2I	TCCGGA	1 cut(s)	118
LguI	GCTCTTC	1 cut(s)	879
LmnI	GCTCC	6 cut(s)	158, 224, 605, 731, 758, 766
Lsp1109I	GCAGC	3 cut(s)	757, 1060, 1063
LweI	GCATC	2 cut(s)	231, 582
MaeI	CTAG	2 cut(s)	309, 849
MaeII	ACGT	1 cut(s)	802
MbiI	CCGCTC	1 cut(s)	382
MboII	GAAGA	5 cut(s)	59, 548, 896, 971, 1013
MhlI	GDGCHC	4 cut(s)	56, 229, 368, 763
MluCI	AATT	1 cut(s)	706
MlyI	GAGTC	2 cut(s)	316, 851
MmeI	TCCRAC	1 cut(s)	333
MroI	TCCGGA	1 cut(s)	118
MslI	CAYNNNNRTG	1 cut(s)	1015
MspA1I	CMGCKG	1 cut(s)	770
MspI	CCGG	1 cut(s)	119
MspR9I	CCNGG	4 cut(s)	156, 288, 651, 1056
Mva1269I	GAATGC	1 cut(s)	968
MvaI	CCWGG	4 cut(s)	156, 288, 651, 1056
MvnI	CGCG	1 cut(s)	320
MwoI	GCNNNNNNNGC	8 cut(s)	64, 86, 326, 605, 655, 731, 767, 776
NdeI	CATATG	1 cut(s)	250
NlaIII	CATG	1 cut(s)	280
NlaIV	GGNNCC	2 cut(s)	226, 366
NruI	TCGCGA	1 cut(s)	320
OliI	CACNNNNGTG	1 cut(s)	1015
PaqCI	CACCTGC	1 cut(s)	710
PciSI	GCTCTTC	1 cut(s)	879
PctI	GAATGC	1 cut(s)	968
PfeI	GAWTC	2 cut(s)	790, 922
PfoI	TCCNGGA	1 cut(s)	154
PkrI	GCNGC	4 cut(s)	246, 772, 1050, 1053
PleI	GAGTC	2 cut(s)	316, 850
PpsI	GAGTC	2 cut(s)	316, 850
Psp124BI	GAGCTC	1 cut(s)	763
Psp6I	CCWGG	4 cut(s)	154, 286, 649, 1054
PspFI	CCCAGC	2 cut(s)	271, 443
PspGI	CCWGG	4 cut(s)	154, 286, 649, 1054
PspN4I	GGNNCC	2 cut(s)	226, 366
PspOMI	GGGCCC	1 cut(s)	364
PspPI	GGNCC	6 cut(s)	23, 126, 152, 364, 365, 1022
PsrI	GAACNNNNNNTAC	2 cut(s)	502, 534
PstI	CTGCAG	2 cut(s)	415, 721
PstNI	CAGNNNCTG	2 cut(s)	650, 725
PvuII	CAGCTG	1 cut(s)	770
RruI	TCGCGA	1 cut(s)	320
RsaI	GTAC	1 cut(s)	269
RsaNI	GTAC	1 cut(s)	268
RseI	CAYNNNNRTG	1 cut(s)	1015
SacI	GAGCTC	1 cut(s)	763
SapI	GCTCTTC	1 cut(s)	879
SatI	GCNGC	4 cut(s)	245, 771, 1049, 1052
Sau96I	GGNCC	6 cut(s)	23, 126, 152, 364, 365, 1022
SbfI	CCTGCAGG	1 cut(s)	721
SchI	GAGTC	2 cut(s)	316, 851
ScrFI	CCNGG	4 cut(s)	156, 288, 651, 1056
SdaI	CCTGCAGG	1 cut(s)	721
SduI	GDGCHC	4 cut(s)	56, 229, 368, 763
SfaNI	GCATC	2 cut(s)	231, 582
SfcI	CTRYAG	3 cut(s)	84, 411, 717
SinI	GGWCC	3 cut(s)	126, 152, 1022
SmiMI	CAYNNNNRTG	1 cut(s)	1015
SmlI	CTYRAG	1 cut(s)	1043
SmoI	CTYRAG	1 cut(s)	1043
Sse8387I	CCTGCAGG	1 cut(s)	721
Sse9I	AATT	1 cut(s)	706
SsiI	CCGC	5 cut(s)	245, 382, 773, 875, 1020
SspMI	CTAG	2 cut(s)	309, 849
SstI	GAGCTC	1 cut(s)	763
StyD4I	CCNGG	4 cut(s)	154, 286, 649, 1054
StyI	CCWWGG	1 cut(s)	402
TaaI	ACNGT	2 cut(s)	190, 1076
TaiI	ACGT	1 cut(s)	805
TasI	AATT	1 cut(s)	706
TauI	GCSGC	1 cut(s)	247
TfiI	GAWTC	2 cut(s)	790, 922
TscAI	CASTG	3 cut(s)	538, 651, 791
TseI	GCWGC	3 cut(s)	770, 1048, 1051
TspDTI	ATGAA	4 cut(s)	17, 102, 510, 954
TspGWI	ACGGA	2 cut(s)	255, 880
TspRI	CASTG	3 cut(s)	538, 651, 791
VpaK11BI	GGWCC	3 cut(s)	126, 152, 1022
XapI	RAATTY	1 cut(s)	706
XcmI	CCANNNNNNNNNTGG	1 cut(s)	557
XspI	CTAG	2 cut(s)	309, 849

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.