Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0004261

Physical Location & Seq

Genomic Coordinates Reverse (-)

17579037 .. 17579930

Gene Structure 894 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G178200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 894 bp

ATGGCTGCTAAGTACCATGTTAGATCAATCAGCTTGCCTTCAAGATCTCATCCTACCACTCTCAGAGTTGAAGAGGAGCTGAGCAGGCTCCAAGCATGGGAGGCTTCTTCATCTGCTTCAACCTCAGACTCAATCTGCAGAGCTCTGTGTGGGCTAGAGGAGTTGTATGAGTGTGTAGATGATTTGCTCCACATGGCATCAACCCAACAGCTCCTCTCTCAACCCCAACAAGAGAAGTACATGAATGAGTTGTTGGATGGATCAGTGAGGCTCCTGGACATCTGCGGAATTACAAAAGATGCCATTTCACAAATCAAGGAGCATGCTAGGGCTCTTCAGTCTGCTCTCAGGAGGAGAAAGGGAGACTCAAGCATTGAAACCGGCATTGCCAACTACACTTGCTTCAGAAAGAAAATGAAGAAGGAGGCCAAGAAACTGATCACATCATTGAAGCAAGTTGACAGCAAAATTGGAGCATCACAAATGGTAGAGCAAGATCAGCATCTTTCTGCTGTGATCAGAGTGCTTAGAGAAGCTTGCTCCAATAACATGTCCATCTTCCAATCACTCTTGGTGTTTTTATCAGTGCCTGTTTCCAAGCCAAAGTCAAACAAGTGGTCTTTGGTGTCAAAGTTCATGCACAAGGGAGTGATAGCATGTGAAGGGCAGAAGGAAGACATTAATGAGATGGACGGTGTTGATGCTGCTCTGAACACACTGCGCAAGTCATCAGCGGCTCCAATTGAATGTACTGATGTTGAGAAGATTCAAAGTGCACAGAAAAGATTGGAGGCTTTGGAAGTCACCATTGAAGGCCTTGACAGTGGTTTGGAAAGCGTTTTCAGGCGCTTGATTAAAACAAGAGCTTCTCTTTTGAACATAATCTCACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF241

Protein Analysis

298

Amino Acids

33.05

Weight (kDa)

8.55

Isoelectric Point (pI)

65.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17680 AT4G35690 AT4G35710
fragaria_vesca	FvH4_1g10690 FvH4_1g10710
malus_domestica	MD02G1120800.v1.1 MD02G1121000.v1.1 MD15G1234800.v1.1 MD15G1234900.v1.1
prunus_persica	Prupe.7G178200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0097861 RchiOBHm_Chr2g0097871
rosa_laevigata	RLG00000016741
rosa_multiflora	Rmu_co8105842.1_g000001 Rmu_sc0000974.1_g000030 Rmu_sc0008442.1_g000014 Rmu_sc0008442.1_g000017 Rmu_sc0020316.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144480 Rroxscaffold_2G00144520
rosa_rugosa	Rorug02G0068800 Rorug02G0068900
rosa_samantha	Rh2AG115400 Rh2AG115600 Rh2BG118400 Rh2BG118500 Rh2CG119900 Rh2CG120000 Rh2DG119700 Rh2DG119800
rosa_wichuraiana	Rw2G009020 Rw2G009040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	722
AciI	CCGC	2 cut(s)	285, 734
AclWI	GGATC	1 cut(s)	268
AcuI	CTGAAG	2 cut(s)	320, 388
AfaI	GTAC	3 cut(s)	14, 239, 751
AfiI	CCNNNNNNNGG	1 cut(s)	97
AflIII	ACRYGT	1 cut(s)	549
AgsI	TTSAA	9 cut(s)	42, 71, 120, 377, 451, 746, 770, 812, 877
AjnI	CCWGG	1 cut(s)	273
AjuI	GAANNNNNNNTTGG	2 cut(s)	236, 268
AluBI	AGCT	6 cut(s)	33, 79, 143, 211, 536, 866
AluI	AGCT	6 cut(s)	33, 79, 143, 211, 536, 866
Alw21I	GWGCWC	2 cut(s)	145, 778
Alw26I	GTCTC	1 cut(s)	357
Alw44I	GTGCAC	1 cut(s)	774
AlwI	GGATC	1 cut(s)	268
AlwNI	CAGNNNCTG	1 cut(s)	590
AoxI	GGCC	2 cut(s)	426, 814
ApaLI	GTGCAC	1 cut(s)	774
ApeKI	GCWGC	2 cut(s)	5, 704
ArsI	GACNNNNNNTTYG	2 cut(s)	602, 634
AseI	ATTAAT	1 cut(s)	681
AspLEI	GCGC	2 cut(s)	723, 849
AsuHPI	GGTGA	1 cut(s)	796
BaeGI	GKGCMC	1 cut(s)	778
BanII	GRGCYC	2 cut(s)	145, 334
BbsI	GAAGAC	1 cut(s)	681
Bbv12I	GWGCWC	2 cut(s)	145, 778
BbvI	GCAGC	1 cut(s)	691
BccI	CCATC	3 cut(s)	251, 563, 682
BciT130I	CCWGG	1 cut(s)	275
BclI	TGATCA	2 cut(s)	438, 516
BcoDI	GTCTC	1 cut(s)	357
BfaI	CTAG	2 cut(s)	155, 327
BfmI	CTRYAG	1 cut(s)	136
BfoI	RGCGCY	1 cut(s)	850
BglII	AGATCT	1 cut(s)	44
BisI	GCNGC	3 cut(s)	6, 705, 735
BlpI	GCTNAGC	1 cut(s)	80
BlsI	GCNGC	3 cut(s)	7, 706, 736
Bme1390I	CCNGG	1 cut(s)	275
BmiI	GGNNCC	3 cut(s)	89, 272, 738
BmrFI	CCNGG	1 cut(s)	275
BmsI	GCATC	5 cut(s)	206, 289, 485, 511, 691
BpiI	GAAGAC	1 cut(s)	681
Bpu1102I	GCTNAGC	1 cut(s)	80
BpuEI	CTTGAG	1 cut(s)	352
BsaBI	GATNNNNATC	1 cut(s)	501
Bsc4I	CCNNNNNNNGG	1 cut(s)	97
Bse118I	RCCGGY	1 cut(s)	380
Bse3DI	GCAATG	1 cut(s)	384
Bse8I	GATNNNNATC	1 cut(s)	501
BseBI	CCWGG	1 cut(s)	275
BseGI	GGATG	2 cut(s)	49, 262
BseJI	GATNNNNATC	1 cut(s)	501
BseLI	CCNNNNNNNGG	1 cut(s)	97
BseMI	GCAATG	1 cut(s)	384
BseMII	CTCAG	4 cut(s)	71, 76, 138, 361
BseRI	GAGGAG	4 cut(s)	89, 173, 203, 367
BseSI	GKGCMC	1 cut(s)	778
BseXI	GCAGC	1 cut(s)	691
BshFI	GGCC	2 cut(s)	428, 816
BsiHKAI	GWGCWC	2 cut(s)	145, 778
BsiSI	CCGG	1 cut(s)	381
BslI	CCNNNNNNNGG	1 cut(s)	97
BsmAI	GTCTC	1 cut(s)	357
BsnI	GGCC	2 cut(s)	428, 816
Bsp1286I	GDGCHC	3 cut(s)	145, 334, 778
Bsp143I	GATC	6 cut(s)	23, 44, 260, 438, 496, 516
Bsp1720I	GCTNAGC	1 cut(s)	80
BspACI	CCGC	2 cut(s)	285, 734
BspANI	GGCC	2 cut(s)	428, 816
BspCNI	CTCAG	4 cut(s)	72, 75, 137, 360
BspLI	GGNNCC	3 cut(s)	89, 272, 738
BspMAI	CTGCAG	1 cut(s)	140
BspPI	GGATC	1 cut(s)	268
BspQI	GCTCTTC	1 cut(s)	339
BsrDI	GCAATG	1 cut(s)	384
BsrFI	RCCGGY	1 cut(s)	380
BssAI	RCCGGY	1 cut(s)	380
BssMI	GATC	6 cut(s)	23, 44, 260, 438, 496, 516
Bst2UI	CCWGG	1 cut(s)	275
Bst4CI	ACNGT	3 cut(s)	695, 824, 891
Bst6I	CTCTTC	2 cut(s)	66, 339
BstC8I	GCNNGC	4 cut(s)	35, 86, 324, 538
BstDEI	CTNAG	6 cut(s)	9, 62, 80, 124, 347, 527
BstF5I	GGATG	2 cut(s)	49, 262
BstH2I	RGCGCY	1 cut(s)	850
BstHHI	GCGC	2 cut(s)	723, 849
BstKTI	GATC	6 cut(s)	26, 47, 263, 441, 499, 519
BstMAI	GTCTC	1 cut(s)	357
BstMBI	GATC	6 cut(s)	23, 44, 260, 438, 496, 516
BstMWI	GCNNNNNNNGC	3 cut(s)	85, 101, 499
BstNI	CCWGG	1 cut(s)	275
BstNSI	RCATGY	3 cut(s)	326, 553, 660
BstSCI	CCNGG	1 cut(s)	273
BstSFI	CTRYAG	1 cut(s)	136
BstSLI	GKGCMC	1 cut(s)	778
BstV1I	GCAGC	1 cut(s)	691
BstV2I	GAAGAC	1 cut(s)	681
BstX2I	RGATCY	1 cut(s)	44
BstYI	RGATCY	1 cut(s)	44
BsuRI	GGCC	2 cut(s)	428, 816
BtsCI	GGATG	2 cut(s)	49, 262
BtsI	GCAGTG	1 cut(s)	716
BtsIMutI	CAGTG	4 cut(s)	270, 591, 716, 829
Cac8I	GCNNGC	4 cut(s)	35, 86, 324, 538
CaiI	CAGNNNCTG	1 cut(s)	590
CfoI	GCGC	2 cut(s)	723, 849
Cfr10I	RCCGGY	1 cut(s)	380
Csp6I	GTAC	3 cut(s)	13, 238, 750
CviAII	CATG	8 cut(s)	17, 96, 193, 241, 323, 550, 637, 657
CviQI	GTAC	3 cut(s)	13, 238, 750
DdeI	CTNAG	6 cut(s)	9, 62, 80, 124, 347, 527
DpnI	GATC	6 cut(s)	25, 46, 262, 440, 498, 518
DpnII	GATC	6 cut(s)	23, 44, 260, 438, 496, 516
Eam1104I	CTCTTC	2 cut(s)	66, 339
EarI	CTCTTC	2 cut(s)	66, 339
Ecl136II	GAGCTC	1 cut(s)	143
Eco147I	AGGCCT	1 cut(s)	816
Eco24I	GRGCYC	2 cut(s)	145, 334
Eco53kI	GAGCTC	1 cut(s)	143
Eco57I	CTGAAG	2 cut(s)	320, 388
EcoICRI	GAGCTC	1 cut(s)	143
EcoRII	CCWGG	1 cut(s)	273
EcoT38I	GRGCYC	2 cut(s)	145, 334
FaeI	CATG	8 cut(s)	20, 99, 196, 244, 326, 553, 640, 660
FatI	CATG	8 cut(s)	16, 95, 192, 240, 322, 549, 636, 656
FbaI	TGATCA	2 cut(s)	438, 516
Fnu4HI	GCNGC	3 cut(s)	6, 705, 735
FokI	GGATG	2 cut(s)	36, 269
FriOI	GRGCYC	2 cut(s)	145, 334
Fsp4HI	GCNGC	3 cut(s)	6, 705, 735
FspBI	CTAG	2 cut(s)	155, 327
FspI	TGCGCA	1 cut(s)	722
GlaI	GCGC	2 cut(s)	722, 848
GluI	GCNGC	3 cut(s)	6, 705, 735
HaeII	RGCGCY	1 cut(s)	850
HaeIII	GGCC	2 cut(s)	428, 816
HapII	CCGG	1 cut(s)	381
HhaI	GCGC	2 cut(s)	723, 849
Hin1II	CATG	8 cut(s)	20, 99, 196, 244, 326, 553, 640, 660
Hin6I	GCGC	2 cut(s)	721, 847
HinP1I	GCGC	2 cut(s)	721, 847
HincII	GTYRAC	1 cut(s)	460
HindII	GTYRAC	1 cut(s)	460
HindIII	AAGCTT	1 cut(s)	534
HinfI	GANTC	3 cut(s)	128, 365, 766
HpaII	CCGG	1 cut(s)	381
HphI	GGTGA	1 cut(s)	796
Hpy166II	GTNNAC	2 cut(s)	460, 776
Hpy188I	TCNGA	5 cut(s)	65, 127, 407, 521, 711
Hpy188III	TCNNGA	2 cut(s)	42, 349
Hpy8I	GTNNAC	2 cut(s)	460, 776
HpyAV	CCTTC	5 cut(s)	48, 415, 656, 664, 806
HpyCH4III	ACNGT	3 cut(s)	695, 824, 891
HpyCH4V	TGCA	3 cut(s)	138, 640, 776
HpyF10VI	GCNNNNNNNGC	3 cut(s)	85, 101, 499
HpyF3I	CTNAG	6 cut(s)	9, 62, 80, 124, 347, 527
Hsp92II	CATG	8 cut(s)	20, 99, 196, 244, 326, 553, 640, 660
HspAI	GCGC	2 cut(s)	721, 847
Ksp22I	TGATCA	2 cut(s)	438, 516
Kzo9I	GATC	6 cut(s)	23, 44, 260, 438, 496, 516
LguI	GCTCTTC	1 cut(s)	339
LmnI	GCTCC	9 cut(s)	76, 93, 192, 216, 276, 319, 473, 545, 742
LpnPI	CCDG	7 cut(s)	70, 260, 287, 334, 394, 603, 829
Lsp1109I	GCAGC	1 cut(s)	691
LweI	GCATC	5 cut(s)	206, 289, 485, 511, 691
MaeI	CTAG	2 cut(s)	155, 327
MaeIII	GTNAC	1 cut(s)	802
MalI	GATC	6 cut(s)	25, 46, 262, 440, 498, 518
MboI	GATC	6 cut(s)	23, 44, 260, 438, 496, 516
MboII	GAAGA	7 cut(s)	83, 99, 326, 430, 550, 686, 775
MfeI	CAATTG	1 cut(s)	741
MflI	RGATCY	1 cut(s)	44
MhlI	GDGCHC	3 cut(s)	145, 334, 778
MluCI	AATT	3 cut(s)	288, 468, 741
MlyI	GAGTC	2 cut(s)	122, 359
MmeI	TCCRAC	1 cut(s)	234
MnlI	CCTC	9 cut(s)	67, 94, 133, 151, 224, 261, 345, 418, 784
MseI	TTAA	2 cut(s)	681, 855
MspA1I	CMGCKG	1 cut(s)	734
MspI	CCGG	1 cut(s)	381
MspR9I	CCNGG	1 cut(s)	275
MunI	CAATTG	1 cut(s)	741
MvaI	CCWGG	1 cut(s)	275
MwoI	GCNNNNNNNGC	3 cut(s)	85, 101, 499
NdeII	GATC	6 cut(s)	23, 44, 260, 438, 496, 516
NlaIII	CATG	8 cut(s)	20, 99, 196, 244, 326, 553, 640, 660
NlaIV	GGNNCC	3 cut(s)	89, 272, 738
NmuCI	GTSAC	1 cut(s)	802
NsbI	TGCGCA	1 cut(s)	722
NspI	RCATGY	3 cut(s)	326, 553, 660
PaeI	GCATGC	1 cut(s)	326
PceI	AGGCCT	1 cut(s)	816
PciI	ACATGT	1 cut(s)	549
PciSI	GCTCTTC	1 cut(s)	339
PfeI	GAWTC	1 cut(s)	766
PfoI	TCCNGGA	1 cut(s)	273
PkrI	GCNGC	3 cut(s)	7, 706, 736
PleI	GAGTC	2 cut(s)	122, 359
PpsI	GAGTC	2 cut(s)	122, 359
PscI	ACATGT	1 cut(s)	549
PshBI	ATTAAT	1 cut(s)	681
Psp124BI	GAGCTC	1 cut(s)	145
Psp6I	CCWGG	1 cut(s)	273
PspGI	CCWGG	1 cut(s)	273
PspN4I	GGNNCC	3 cut(s)	89, 272, 738
PstI	CTGCAG	1 cut(s)	140
PstNI	CAGNNNCTG	1 cut(s)	590
PsuI	RGATCY	1 cut(s)	44
RsaI	GTAC	3 cut(s)	14, 239, 751
RsaNI	GTAC	3 cut(s)	13, 238, 750
SacI	GAGCTC	1 cut(s)	145
SapI	GCTCTTC	1 cut(s)	339
SaqAI	TTAA	2 cut(s)	681, 855
SatI	GCNGC	3 cut(s)	6, 705, 735
Sau3AI	GATC	6 cut(s)	23, 44, 260, 438, 496, 516
SchI	GAGTC	2 cut(s)	122, 359
ScrFI	CCNGG	1 cut(s)	275
SduI	GDGCHC	3 cut(s)	145, 334, 778
SetI	ASST	7 cut(s)	35, 81, 125, 145, 213, 538, 868
SfaNI	GCATC	5 cut(s)	206, 289, 485, 511, 691
SfcI	CTRYAG	1 cut(s)	136
SmlI	CTYRAG	1 cut(s)	367
SmoI	CTYRAG	1 cut(s)	367
SphI	GCATGC	1 cut(s)	326
Sse9I	AATT	3 cut(s)	288, 468, 741
SseBI	AGGCCT	1 cut(s)	816
SsiI	CCGC	2 cut(s)	285, 734
SspMI	CTAG	2 cut(s)	155, 327
SstI	GAGCTC	1 cut(s)	145
StuI	AGGCCT	1 cut(s)	816
StyD4I	CCNGG	1 cut(s)	273
TaaI	ACNGT	3 cut(s)	695, 824, 891
TasI	AATT	3 cut(s)	288, 468, 741
TatI	WGTACW	2 cut(s)	237, 749
TauI	GCSGC	1 cut(s)	737
TfiI	GAWTC	1 cut(s)	766
Tru1I	TTAA	2 cut(s)	681, 855
Tru9I	TTAA	2 cut(s)	681, 855
TscAI	CASTG	4 cut(s)	270, 591, 723, 829
TseFI	GTSAC	1 cut(s)	802
TseI	GCWGC	2 cut(s)	5, 704
Tsp45I	GTSAC	1 cut(s)	802
TspDTI	ATGAA	4 cut(s)	99, 257, 431, 625
TspRI	CASTG	4 cut(s)	270, 591, 723, 829
VneI	GTGCAC	1 cut(s)	774
VspI	ATTAAT	1 cut(s)	681
XceI	RCATGY	3 cut(s)	326, 553, 660
XspI	CTAG	2 cut(s)	155, 327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.