Rorug02G0068800

BEST Arabidopsis thaliana protein match is Arabidopsis protein of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0004261
Physical Location & Seq
Reverse (-)
5373458 .. 5377856
4399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0068800.1

Sequence Viewer

Length: 2688 bp
ATGGACAGAGAAATGAAAATGTCAACTGCTGCCTTCCTCCTCCTGTATCTGATGATCTCTGCAAGTTCAGTTCACGCGCAGCGCCGAATAGCCTTCATAAGCATTGATTGTGGAGCTCCCTCAAAGCTCTATGAAGACCCGGATACCAACATAACTTACTCACCAGATGACAATTTCATAGACACAGGGATAAGCCAGAACATCTCATCCGAATATATGTATCCTAACAATCCAAACTTGCCATTACCTGCCTCGGACCTTAGGAGTTTTCCTCATGGAAACAAAAACTGCTACACTTTAAAACCTGAAGCTGGGAAAGGTAGTTTGAACCTAATCCGAGCGTCTTTCTTGTATGGAAACTACGATGGAAAAGACCAGCTACCGGAGTTTGATCTCTATCTTGATGTCAATTTCTGGTCTGTGGTGACATTTGGAAATGCTTCTGATATTGTCATAAAGGAGATTGTTGGTTTTGCACAATCTGATGTCATAAATGTTTGTCTTCTAAACAAAGGTTTAGGAACTCCTTTCATTTCGGCATTGGAACTTAGACCGCTTAACAGCTCAAATTATGGGACTGCGTTTGGGACTAATGCATCATTAGTACTCTTTCAAAGACTAGACATTGGATCAAGCAATGGAACAGGTAGGTATGCAGAAGATGTTTATGACCGCGTTTGGTCTAATTACATCTCTCCTTCTTGGGATTCAGTGAGCACTTCTTCACCAATTACTACTGATGAAGATGGATATAGAGTACCTTATGAAGTAATCAAGACTGCAGCTAGGCCTCAGAATGGAAGCGAACCTCTGGAGCTGTATTGGAACACAACTGACTCGAATGCTCAGTTTTATGTTTATATGTACTTTTCTGAAGTGGAGCACCTTGAGAAAAACCAGTCAAGAAAGTTGAACATATCTTGGAATGGTGCTCCATTGTTTGGACATTTTGTGCCTCGTTACTTATATGCAGACATATTATCTAATTCAAAATCTTTGGTGGGAAAAGATCACCAGATTTCTATATCTAAAGAAGAAAACTCGACCCTTCCACCGATTCTCAATGCGGTTGAGATTTACCAAGTCATGCAGCTGGTTGAATCGCCAACTTCTAGTGAAGATGTTGATGCTATTATGAATGTCAAAACCACATATCAAATTAAAAAAACATGGGCTGGTGATCCCTGTTCACCTAAGAATTTCTCTTGGGAAGGTCTTAAATGCAACTACACCATTTCAGTTCCTCAGATTATTTCCCTGAACTTGACCTCAAGCAATTTGAGTGGGATTATAGCTGCTTCCATTTCCAAGCTTTCATCATTGGAGTCCTTGGACTTGTCAAACAATAACTTAACCGGACCAGTGCCTGCATTTCTGGAAGAACTAAAATCTCTCAAGACTCTGAATTTGAAAGGGAATCAATTGTCTGGTTTTGTTCCAAATGCACTTAAGAAAAGATCAGATGCTGGATTACTTGTACTAAGTGTGGATAGTCAAAATGTTTGTGGCTCAAATTCATGCAAAAAAAAGAAGAAAATTGTTGCTCCAATAGTTGGATCATTATTATCAGCACTAGTAGTCCTTATAGTTCTCATACTTGTCTGGAAGCTGAGAACAAAAAAGAACTCAGAAGGAGTAGAAACCTTTAAGAAAGAAGGAATTCCTATTGCATCAAAGAAGTGCCAGTTTAGTTATGATGAGGTTATAGAAATCACCAAAAATTTCAACACTGAAATCGGAAAAGGAGGATTCGGGGCTGTGTACCATGGCTACATGAAAGATGGCACCCAAGTTGCAGTCAAAATGCTTTCTCCATCATCAACTCAAGGACCGAGGGAGTTCCAAACTGAGGCTGAGCTCCTGATGAGAATCCATCACAGAAATTTGGCCTCATTTATTGGATACTGTGATGATGCTGATAACCTGGCTCTTATATATGAGTACATGGCTAATGGGAACCTTAAAGATTATCTCTCAGTTAAAAACTCAGGTATGACTTGGGAATTGAGACTTCGCATCGCCATAGATGCTGCACAAGGGCTAGAGTACTTACACCATGGATGCAAGCCACCTATTGTTCACAGAGATGTGAAGACTGCCAACATTCTCTTAAGTGAAAACTTGGAAGCTAAGATAGCAGATTTTGGTCTTTCGAAGGTTTTTTCCAATGATAATGAAACCGACGTGGAAACCACAGTTATGGGGACAGCAGGTTATTTAGACCCAGAGTACTACAGTTCTCACAAGTTGAATGAAAAAAGCGACGTGTATAGTTTCGGGGTAGTACTATTGGAACTGATCACAGGCCAACCTGCAGTCATAAGAAGCGATGAACGAATCCACATTGTGCAGTGGGTGAGTCCTGAACTCCAGAAAGGGGATATAGCAAGTGTTGTTGATCAAAGAATGGAAGGAGATTTCGATGTGAATTCAGTTTGGAAAGCTTTCGAAATAGCAATGACATGCACGGCTAGAACCTCTCAACAAAGAGCCACCATGGGTTTTGTATTATCAGAGCTAAAACAGTGTTTGGAAATGGAGTTGTCGAGGAATCGAGAAAGAAATTCTGGATTGACTGAAGAAAGTAGAGATAGATTTGCAGCAGCATATAGTAGTTCACCATATAATAGTTCCATGTATACAGATTCCACAAATGCTGATTCCATGACCGGGCCATTTGCTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF241

Protein Analysis

895

Amino Acids

99.35

Weight (kDa)

5.34

Isoelectric Point (pI)

36.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 35 - 362 6.3e-108 Malectin-like domain
LRR_8 PF13855 419 - 475 9.2e-10 Leucine rich repeat
LRR_4 PF12799 440 - 476 8.6e-06 Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr PF07714 575 - 839 2.7e-51 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 576 - 832 2.3e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 256, 2201, 2320
AccB1I GGYRCC 1 cut(s) 1784
AccB7I CCANNNNNTGG 2 cut(s) 941, 1553
AccI GTMKAC 1 cut(s) 2639
AccII CGCG 2 cut(s) 77, 675
AciI CCGC 3 cut(s) 554, 673, 1067
AclWI GGATC 3 cut(s) 637, 1175, 1564
AcsI RAATTY 8 cut(s) 1198, 1405, 1513, 1659, 1720, 1882, 2428, 2563
AcuI CTGAAG 3 cut(s) 327, 894, 2598
AdeI CACNNNGTG 1 cut(s) 2347
AfaI GTAC 9 cut(s) 606, 759, 866, 1479, 1763, 1943, 2048, 2231, 2286
AfiI CCNNNNNNNGG 8 cut(s) 311, 382, 797, 941, 1553, 1849, 2377, 2670
AflII CTTAAG 2 cut(s) 1448, 2110
AflIII ACRYGT 1 cut(s) 2265
AgsI TTSAA 8 cut(s) 328, 614, 913, 990, 1100, 1411, 1726, 2251
AhlI ACTAGT 1 cut(s) 1573
AjiI CACGTC 2 cut(s) 2185, 2266
AjnI CCWGG 1 cut(s) 1923
AloI GAACNNNNNNTCC 2 cut(s) 191, 223
Alw21I GWGCWC 5 cut(s) 118, 719, 885, 934, 1860
Alw26I GTCTC 1 cut(s) 2002
AlwI GGATC 3 cut(s) 637, 1175, 1564
AlwNI CAGNNNCTG 2 cut(s) 1367, 1466
AoxI GGCC 4 cut(s) 788, 1887, 2305, 2672
ApeKI GCWGC 8 cut(s) 29, 79, 782, 1090, 1295, 2030, 2600, 2603
ApoI RAATTY 8 cut(s) 1198, 1405, 1513, 1659, 1720, 1882, 2428, 2563
ArsI GACNNNNNNTTYG 2 cut(s) 1390, 1422
Asp700I GAANNNNTTC 3 cut(s) 439, 1659, 2444
AspLEI GCGC 2 cut(s) 79, 84
AspS9I GGNCC 4 cut(s) 256, 1358, 1829, 2672
AsuC2I CCSGG 2 cut(s) 140, 2671
AsuHPI GGTGA 9 cut(s) 153, 436, 717, 1004, 1182, 1190, 1705, 2368, 2610
AsuII TTCGAA 2 cut(s) 2153, 2448
AvaII GGWCC 3 cut(s) 256, 1358, 1829
AxyI CCTNAGG 1 cut(s) 260
BanI GGYRCC 1 cut(s) 1784
BanII GRGCYC 2 cut(s) 118, 1860
BbsI GAAGAC 3 cut(s) 141, 494, 2099
Bbv12I GWGCWC 5 cut(s) 118, 719, 885, 934, 1860
BbvI GCAGC 8 cut(s) 16, 91, 794, 1102, 1282, 2017, 2612, 2615
BccI CCATC 5 cut(s) 359, 740, 1775, 1822, 1881
BceAI ACGGC 1 cut(s) 2484
BciT130I CCWGG 1 cut(s) 1925
BciVI GTATCC 3 cut(s) 136, 231, 1895
BclI TGATCA 2 cut(s) 2298, 2398
BcnI CCSGG 2 cut(s) 140, 2671
BcoDI GTCTC 1 cut(s) 2002
BcuI ACTAGT 1 cut(s) 1573
BfaI CTAG 7 cut(s) 620, 786, 1113, 1574, 2042, 2472, 2682
BfmI CTRYAG 3 cut(s) 780, 2233, 2313
BfoI RGCGCY 1 cut(s) 85
BfrI CTTAAG 2 cut(s) 1448, 2110
BfuAI ACCTGC 3 cut(s) 256, 2201, 2320
BfuI GTATCC 3 cut(s) 136, 231, 1895
BisI GCNGC 8 cut(s) 30, 80, 783, 1091, 1296, 2031, 2601, 2604
BlpI GCTNAGC 1 cut(s) 1854
BlsI GCNGC 8 cut(s) 31, 81, 784, 1092, 1297, 2032, 2602, 2605
BmcAI AGTACT 4 cut(s) 606, 2048, 2231, 2286
Bme1390I CCNGG 3 cut(s) 140, 1925, 2671
Bme18I GGWCC 3 cut(s) 256, 1358, 1829
BmgBI CACGTC 2 cut(s) 2185, 2266
BmgT120I GGNCC 4 cut(s) 256, 1358, 1829, 2672
BmiI GGNNCC 2 cut(s) 1786, 1958
BmrFI CCNGG 3 cut(s) 140, 1925, 2671
BmsI GCATC 8 cut(s) 605, 1117, 1453, 1679, 1903, 2017, 2025, 2051
BpiI GAAGAC 3 cut(s) 141, 494, 2099
BplI GAGNNNNNCTC 2 cut(s) 256, 288
BpmI CTGGAG 2 cut(s) 833, 2354
Bpu1102I GCTNAGC 1 cut(s) 1854
Bpu14I TTCGAA 2 cut(s) 2153, 2448
BpuEI CTTGAG 4 cut(s) 908, 1255, 1379, 1809
BpuMI CCSGG 2 cut(s) 140, 2671
BsaBI GATNNNNATC 2 cut(s) 396, 1868
BsaJI CCNNGG 6 cut(s) 252, 1329, 1765, 1832, 2056, 2496
BsaWI WCCGGW 2 cut(s) 382, 1355
Bsc4I CCNNNNNNNGG 8 cut(s) 311, 382, 797, 941, 1553, 1849, 2377, 2670
Bse1I ACTGG 3 cut(s) 898, 1361, 1684
Bse21I CCTNAGG 1 cut(s) 260
Bse3DI GCAATG 2 cut(s) 643, 2463
Bse8I GATNNNNATC 2 cut(s) 396, 1868
BseBI CCWGG 1 cut(s) 1925
BseDI CCNNGG 6 cut(s) 252, 1329, 1765, 1832, 2056, 2496
BseGI GGATG 2 cut(s) 206, 2066
BseJI GATNNNNATC 2 cut(s) 396, 1868
BseLI CCNNNNNNNGG 8 cut(s) 311, 382, 797, 941, 1553, 1849, 2377, 2670
BseMI GCAATG 2 cut(s) 643, 2463
BseMII CTCAG 9 cut(s) 806, 860, 1259, 1601, 1641, 1839, 1845, 1989, 2001
BseNI ACTGG 3 cut(s) 898, 1361, 1684
BseRI GAGGAG 1 cut(s) 29
BseXI GCAGC 8 cut(s) 16, 91, 794, 1102, 1282, 2017, 2612, 2615
BseYI CCCAGC 1 cut(s) 311
BsgI GTGCAG 2 cut(s) 2016, 2369
Bsh1236I CGCG 2 cut(s) 77, 675
BshFI GGCC 4 cut(s) 790, 1889, 2307, 2674
BshNI GGYRCC 1 cut(s) 1784
BsiHKAI GWGCWC 5 cut(s) 118, 719, 885, 934, 1860
BsiSI CCGG 4 cut(s) 140, 383, 1356, 2670
BslFI GGGAC 3 cut(s) 589, 601, 2218
BslI CCNNNNNNNGG 8 cut(s) 311, 382, 797, 941, 1553, 1849, 2377, 2670
BsmAI GTCTC 1 cut(s) 2002
BsmFI GGGAC 3 cut(s) 589, 601, 2218
BsmI GAATGC 1 cut(s) 847
BsnI GGCC 4 cut(s) 790, 1889, 2307, 2674
Bsp119I TTCGAA 2 cut(s) 2153, 2448
Bsp1286I GDGCHC 5 cut(s) 118, 719, 885, 934, 1860
Bsp143I GATC 9 cut(s) 54, 391, 629, 1009, 1180, 1457, 1556, 2298, 2398
Bsp1720I GCTNAGC 1 cut(s) 1854
Bsp19I CCATGG 3 cut(s) 1765, 2056, 2496
BspACI CCGC 3 cut(s) 554, 673, 1067
BspANI GGCC 4 cut(s) 790, 1889, 2307, 2674
BspCNI CTCAG 9 cut(s) 805, 859, 1258, 1602, 1640, 1840, 1846, 1988, 2000
BspFNI CGCG 2 cut(s) 77, 675
BspLI GGNNCC 2 cut(s) 1786, 1958
BspMAI CTGCAG 2 cut(s) 784, 2317
BspMI ACCTGC 3 cut(s) 256, 2201, 2320
BspPI GGATC 3 cut(s) 637, 1175, 1564
BspT104I TTCGAA 2 cut(s) 2153, 2448
BspT107I GGYRCC 1 cut(s) 1784
BspTI CTTAAG 2 cut(s) 1448, 2110
BsrDI GCAATG 2 cut(s) 643, 2463
BsrI ACTGG 3 cut(s) 898, 1361, 1684
BssECI CCNNGG 6 cut(s) 252, 1329, 1765, 1832, 2056, 2496
BssMI GATC 9 cut(s) 54, 391, 629, 1009, 1180, 1457, 1556, 2298, 2398
BssNAI GTATAC 1 cut(s) 2640
BssT1I CCWWGG 4 cut(s) 1329, 1765, 2056, 2496
Bst1107I GTATAC 1 cut(s) 2640
Bst2UI CCWGG 1 cut(s) 1925
Bst4CI ACNGT 4 cut(s) 1907, 2197, 2237, 2526
BstAFI CTTAAG 2 cut(s) 1448, 2110
BstBI TTCGAA 2 cut(s) 2153, 2448
BstC8I GCNNGC 2 cut(s) 1368, 2066
BstDSI CCRYGG 3 cut(s) 1765, 2056, 2496
BstF5I GGATG 2 cut(s) 206, 2066
BstFNI CGCG 2 cut(s) 77, 675
BstH2I RGCGCY 1 cut(s) 85
BstHHI GCGC 2 cut(s) 79, 84
BstKTI GATC 9 cut(s) 57, 394, 632, 1012, 1183, 1460, 1559, 2301, 2401
BstMAI GTCTC 1 cut(s) 2002
BstMBI GATC 9 cut(s) 54, 391, 629, 1009, 1180, 1457, 1556, 2298, 2398
BstMWI GCNNNNNNNGC 2 cut(s) 2027, 2135
BstNI CCWGG 1 cut(s) 1925
BstNSI RCATGY 1 cut(s) 2466
BstSCI CCNGG 3 cut(s) 138, 1923, 2669
BstSFI CTRYAG 3 cut(s) 780, 2233, 2313
BstUI CGCG 2 cut(s) 77, 675
BstV1I GCAGC 8 cut(s) 16, 91, 794, 1102, 1282, 2017, 2612, 2615
BstV2I GAAGAC 3 cut(s) 141, 494, 2099
BstXI CCANNNNNNTGG 1 cut(s) 2200
BstZ17I GTATAC 1 cut(s) 2640
Bsu36I CCTNAGG 1 cut(s) 260
BsuI GTATCC 3 cut(s) 136, 231, 1895
BsuRI GGCC 4 cut(s) 790, 1889, 2307, 2674
BtgI CCRYGG 3 cut(s) 1765, 2056, 2496
BtgZI GCGATG 2 cut(s) 2002, 2343
BtrI CACGTC 2 cut(s) 2185, 2266
BtsCI GGATG 2 cut(s) 206, 2066
BtsI GCAGTG 1 cut(s) 2357
BtsIMutI CAGTG 5 cut(s) 717, 1368, 1728, 2357, 2531
BveI ACCTGC 3 cut(s) 256, 2201, 2320
Cac8I GCNNGC 2 cut(s) 1368, 2066
CaiI CAGNNNCTG 2 cut(s) 1367, 1466
CfoI GCGC 2 cut(s) 79, 84
Cfr13I GGNCC 4 cut(s) 256, 1358, 1829, 2672
CseI GACGC 1 cut(s) 330
Csp6I GTAC 9 cut(s) 605, 758, 865, 1478, 1762, 1942, 2047, 2230, 2285
CspCI CAANNNNNGTGG 2 cut(s) 1264, 1299
CviQI GTAC 9 cut(s) 605, 758, 865, 1478, 1762, 1942, 2047, 2230, 2285
DpnI GATC 9 cut(s) 56, 393, 631, 1011, 1182, 1459, 1558, 2300, 2400
DpnII GATC 9 cut(s) 54, 391, 629, 1009, 1180, 1457, 1556, 2298, 2398
DraI TTTAAA 1 cut(s) 300
DraIII CACNNNGTG 1 cut(s) 2347
Ecl136II GAGCTC 2 cut(s) 116, 1858
Eco130I CCWWGG 4 cut(s) 1329, 1765, 2056, 2496
Eco147I AGGCCT 1 cut(s) 790
Eco24I GRGCYC 2 cut(s) 118, 1860
Eco47I GGWCC 3 cut(s) 256, 1358, 1829
Eco53kI GAGCTC 2 cut(s) 116, 1858
Eco57I CTGAAG 3 cut(s) 327, 894, 2598
Eco81I CCTNAGG 1 cut(s) 260
EcoICRI GAGCTC 2 cut(s) 116, 1858
EcoRI GAATTC 2 cut(s) 1659, 2428
EcoRII CCWGG 1 cut(s) 1923
EcoT14I CCWWGG 4 cut(s) 1329, 1765, 2056, 2496
EcoT22I ATGCAT 1 cut(s) 598
EcoT38I GRGCYC 2 cut(s) 118, 1860
ErhI CCWWGG 4 cut(s) 1329, 1765, 2056, 2496
FaqI GGGAC 3 cut(s) 589, 601, 2218
FbaI TGATCA 2 cut(s) 2298, 2398
FblI GTMKAC 1 cut(s) 2639
Fnu4HI GCNGC 8 cut(s) 30, 80, 783, 1091, 1296, 2031, 2601, 2604
FokI GGATG 2 cut(s) 193, 2073
FriOI GRGCYC 2 cut(s) 118, 1860
Fsp4HI GCNGC 8 cut(s) 30, 80, 783, 1091, 1296, 2031, 2601, 2604
FspBI CTAG 7 cut(s) 620, 786, 1113, 1574, 2042, 2472, 2682
GlaI GCGC 2 cut(s) 78, 83
GluI GCNGC 8 cut(s) 30, 80, 783, 1091, 1296, 2031, 2601, 2604
GsaI CCCAGC 1 cut(s) 315
GsuI CTGGAG 2 cut(s) 833, 2354
HaeII RGCGCY 1 cut(s) 85
HaeIII GGCC 4 cut(s) 790, 1889, 2307, 2674
HapII CCGG 4 cut(s) 140, 383, 1356, 2670
HgaI GACGC 1 cut(s) 330
HhaI GCGC 2 cut(s) 79, 84
Hin6I GCGC 2 cut(s) 77, 82
HinP1I GCGC 2 cut(s) 77, 82
HincII GTYRAC 1 cut(s) 24
HindII GTYRAC 1 cut(s) 24
HindIII AAGCTT 2 cut(s) 1310, 2442
HpaII CCGG 4 cut(s) 140, 383, 1356, 2670
HphI GGTGA 9 cut(s) 153, 436, 717, 1004, 1182, 1190, 1705, 2368, 2610
Hpy166II GTNNAC 7 cut(s) 24, 73, 1190, 1762, 2080, 2618, 2640
Hpy8I GTNNAC 7 cut(s) 24, 73, 1190, 1762, 2080, 2618, 2640
Hpy99I CGWCG 2 cut(s) 2186, 2267
HpyAV CCTTC 9 cut(s) 43, 103, 708, 1058, 1205, 1625, 1649, 2149, 2405
HpyCH4III ACNGT 4 cut(s) 1907, 2197, 2237, 2526
HpyCH4IV ACGT 2 cut(s) 2184, 2265
HpyF10VI GCNNNNNNNGC 2 cut(s) 2027, 2135
HpySE526I ACGT 2 cut(s) 2184, 2265
HspAI GCGC 2 cut(s) 77, 82
Ksp22I TGATCA 2 cut(s) 2298, 2398
Kzo9I GATC 9 cut(s) 54, 391, 629, 1009, 1180, 1457, 1556, 2298, 2398
LmnI GCTCC 7 cut(s) 113, 121, 814, 880, 937, 1549, 1863
Lsp1109I GCAGC 8 cut(s) 16, 91, 794, 1102, 1282, 2017, 2612, 2615
LweI GCATC 8 cut(s) 605, 1117, 1453, 1679, 1903, 2017, 2025, 2051
MaeI CTAG 7 cut(s) 620, 786, 1113, 1574, 2042, 2472, 2682
MaeII ACGT 2 cut(s) 2184, 2265
MaeIII GTNAC 2 cut(s) 424, 959
MalI GATC 9 cut(s) 56, 393, 631, 1011, 1182, 1459, 1558, 2300, 2400
MboI GATC 9 cut(s) 54, 391, 629, 1009, 1180, 1457, 1556, 2298, 2398
MfeI CAATTG 1 cut(s) 1421
MhlI GDGCHC 5 cut(s) 118, 719, 885, 934, 1860
MlyI GAGTC 4 cut(s) 830, 1334, 1393, 2368
MmeI TCCRAC 1 cut(s) 1534
Mph1103I ATGCAT 1 cut(s) 598
MroXI GAANNNNTTC 3 cut(s) 439, 1659, 2444
MslI CAYNNNNRTG 2 cut(s) 2085, 2198
MspA1I CMGCKG 1 cut(s) 1093
MspCI CTTAAG 2 cut(s) 1448, 2110
MspI CCGG 4 cut(s) 140, 383, 1356, 2670
MspR9I CCNGG 3 cut(s) 140, 1925, 2671
MteI GCGCNGCGC 1 cut(s) 80
MunI CAATTG 1 cut(s) 1421
Mva1269I GAATGC 1 cut(s) 847
MvaI CCWGG 1 cut(s) 1925
MvnI CGCG 2 cut(s) 77, 675
MwoI GCNNNNNNNGC 2 cut(s) 2027, 2135
NciI CCSGG 2 cut(s) 140, 2671
NcoI CCATGG 3 cut(s) 1765, 2056, 2496
NdeII GATC 9 cut(s) 54, 391, 629, 1009, 1180, 1457, 1556, 2298, 2398
NlaIV GGNNCC 2 cut(s) 1786, 1958
NmuCI GTSAC 1 cut(s) 424
NsiI ATGCAT 1 cut(s) 598
NspI RCATGY 1 cut(s) 2466
NspV TTCGAA 2 cut(s) 2153, 2448
PceI AGGCCT 1 cut(s) 790
PctI GAATGC 1 cut(s) 847
PdmI GAANNNNTTC 3 cut(s) 439, 1659, 2444
PflMI CCANNNNNTGG 2 cut(s) 941, 1553
PkrI GCNGC 8 cut(s) 31, 81, 784, 1092, 1297, 2032, 2602, 2605
PleI GAGTC 4 cut(s) 830, 1333, 1393, 2367
PpsI GAGTC 4 cut(s) 830, 1333, 1393, 2367
Psp124BI GAGCTC 2 cut(s) 118, 1860
Psp6I CCWGG 1 cut(s) 1923
PspFI CCCAGC 1 cut(s) 311
PspGI CCWGG 1 cut(s) 1923
PspN4I GGNNCC 2 cut(s) 1786, 1958
PspPI GGNCC 4 cut(s) 256, 1358, 1829, 2672
PstI CTGCAG 2 cut(s) 784, 2317
PstNI CAGNNNCTG 2 cut(s) 1367, 1466
PvuII CAGCTG 1 cut(s) 1093
RsaI GTAC 9 cut(s) 606, 759, 866, 1479, 1763, 1943, 2048, 2231, 2286
RsaNI GTAC 9 cut(s) 605, 758, 865, 1478, 1762, 1942, 2047, 2230, 2285
RseI CAYNNNNRTG 2 cut(s) 2085, 2198
SacI GAGCTC 2 cut(s) 118, 1860
SatI GCNGC 8 cut(s) 30, 80, 783, 1091, 1296, 2031, 2601, 2604
Sau3AI GATC 9 cut(s) 54, 391, 629, 1009, 1180, 1457, 1556, 2298, 2398
Sau96I GGNCC 4 cut(s) 256, 1358, 1829, 2672
ScaI AGTACT 4 cut(s) 606, 2048, 2231, 2286
SchI GAGTC 4 cut(s) 830, 1334, 1393, 2368
ScrFI CCNGG 3 cut(s) 140, 1925, 2671
SduI GDGCHC 5 cut(s) 118, 719, 885, 934, 1860
SfaNI GCATC 8 cut(s) 605, 1117, 1453, 1679, 1903, 2017, 2025, 2051
SfcI CTRYAG 3 cut(s) 780, 2233, 2313
SfuI TTCGAA 2 cut(s) 2153, 2448
SinI GGWCC 3 cut(s) 256, 1358, 1829
SmiMI CAYNNNNRTG 2 cut(s) 2085, 2198
SmlI CTYRAG 6 cut(s) 887, 1270, 1394, 1448, 1824, 2110
SmoI CTYRAG 6 cut(s) 887, 1270, 1394, 1448, 1824, 2110
SpeI ACTAGT 1 cut(s) 1573
SseBI AGGCCT 1 cut(s) 790
SsiI CCGC 3 cut(s) 554, 673, 1067
SspMI CTAG 7 cut(s) 620, 786, 1113, 1574, 2042, 2472, 2682
SstI GAGCTC 2 cut(s) 118, 1860
StuI AGGCCT 1 cut(s) 790
StyD4I CCNGG 3 cut(s) 138, 1923, 2669
StyI CCWWGG 4 cut(s) 1329, 1765, 2056, 2496
TaaI ACNGT 4 cut(s) 1907, 2197, 2237, 2526
TaiI ACGT 2 cut(s) 2187, 2268
TaqI TCGA 7 cut(s) 839, 1043, 2153, 2421, 2448, 2546, 2554
TaqII GACCGA 1 cut(s) 1846
TatI WGTACW 7 cut(s) 604, 864, 1477, 1941, 2046, 2229, 2284
TscAI CASTG 5 cut(s) 717, 1368, 1735, 2357, 2531
TseFI GTSAC 1 cut(s) 424
TseI GCWGC 8 cut(s) 29, 79, 782, 1090, 1295, 2030, 2600, 2603
Tsp45I GTSAC 1 cut(s) 424
TspRI CASTG 5 cut(s) 717, 1368, 1735, 2357, 2531
Van91I CCANNNNNTGG 2 cut(s) 941, 1553
Vha464I CTTAAG 2 cut(s) 1448, 2110
VpaK11BI GGWCC 3 cut(s) 256, 1358, 1829
XapI RAATTY 8 cut(s) 1198, 1405, 1513, 1659, 1720, 1882, 2428, 2563
XceI RCATGY 1 cut(s) 2466
XmiI GTMKAC 1 cut(s) 2639
XmnI GAANNNNTTC 3 cut(s) 439, 1659, 2444
XspI CTAG 7 cut(s) 620, 786, 1113, 1574, 2042, 2472, 2682
ZrmI AGTACT 4 cut(s) 606, 2048, 2231, 2286
Zsp2I ATGCAT 1 cut(s) 598
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.