Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001123

Physical Location & Seq

Genomic Coordinates Forward (+)

20607931 .. 20613027

Gene Structure 5097 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G238500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 921 bp

ATGTGTATCTGTTTGACATTTGAGAAGACAATTCCCCTAACATGCAGAAGCCCTTATTTGCTATTGTTTGCATGCGCTTGTGATCTGTGCTCTGTCGATTGCTGCAGTAGGAGTTTGGTCTGTGCTATCTTATTTGGGGGGCCTAATATGAGCTTCACCTCTTCATCTGTGGGTTCTGGTGGTAGAACTGTTAGAAGGGTATTTGAGTTTGGAAGAACCTATGTAGTCAGACCTAAAGGCAAACACCAGGCCACTGTAGTTTGGCTACATGGTCTTGGTGATAATGGTTCAAGCTGGTCCCAGCTCTTGGAGACCCTCCCTCTTCCAAATATTAAATGGATTTGTCCAACCGCTCCTACTCAACCAATTAAAGTGTTTGGTGGCTTTCCTTCCACTGCTTGGTTTGATGTTGGAGAACTTTCAGAAGATGCTCCAGATGATATAGAAGGTTTGGATGCTTCTGCAGCACATGTTGCAAATTTGCTATCAACAGAGCCTGATGACATTAAACTTGGAGTTGGAGGGTTTAGTATGGGTGCAGCTACTGCCCTATACTCTGCTACTTGCTTTACTCTAAGAAAATACGGGAATGGTAATCCATACCCATGCAATCTGAGTGCAGTTGTCGGACTAAGCGGATGGCTTCCATGTTCCAAGACCTTGAGTAAGAAGTTAGAAGAAGTAGATGATGCTAGGAGGCGTGCTGCCTCCTTGCCGCTTCTGTTATGCCATGGAAAAGGTGATGATGTGGTTCCTTATAAGTTTGGTGAGAAATCTTCACAGGCTTTGAGTTCAACTGGCTATCAGAATGTGGCATTCAAAGCCTACAATGGGCTTGGTCATTATACAGTTCCCGAAGAGATGGATGAAGTTTGTGCTTGGCTTTTGTCAAAATTGGGGCTTGAGGGGATTTCTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0002084 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0006928 GO:0006935 GO:0007275 GO:0007399 GO:0007409 GO:0007411 GO:0008150 GO:0008152 GO:0008474 GO:0009056 GO:0009057 GO:0009605 GO:0009653 GO:0009987 GO:0016043 GO:0016787 GO:0016788 GO:0016790 GO:0019538 GO:0022008 GO:0030030 GO:0030154 GO:0030163 GO:0030182 GO:0031175 GO:0032501 GO:0032502 GO:0032989 GO:0032990 GO:0035601 GO:0036211 GO:0040011 GO:0042157 GO:0042159 GO:0042221 GO:0042330 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048468 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0050896 GO:0052689 GO:0061564 GO:0071704 GO:0071840 GO:0097485 GO:0098599 GO:0098732 GO:0098734 GO:0120036 GO:0120039 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00564 map00564

Pfam Domains

Protein Families

Abhydrolase_2

Protein Analysis

307

Amino Acids

32.82

Weight (kDa)

5.97

Isoelectric Point (pI)

43.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001123)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20060 AT5G20060 AT5G20060 AT5G20060
fragaria_vesca	FvH4_1g03850 FvH4_1g03850 FvH4_1g03850 FvH4_1g03850 FvH4_2g29580 FvH4_2g29580 FvH4_2g29580 FvH4_2g29580 FvH4_2g29580 FvH4_2g29580
malus_domestica	MD02G1036900.v1.1 MD08G1145500.v1.1 MD15G1121100.v1.1 MD15G1177000.v1.1
prunus_persica	Prupe.1G473700_v2.0.a1 Prupe.1G473700_v2.0.a1 Prupe.1G473700_v2.0.a1 Prupe.1G473700_v2.0.a1 Prupe.1G473700_v2.0.a1 Prupe.7G238500_v2.0.a1 Prupe.7G238500_v2.0.a1 Prupe.7G238500_v2.0.a1
pyrus_communis	pycom02g03030 pycom08g12260 pycom15g10930 pycom15g15850
rosa_chinensis	RchiOBHm_Chr2g0089241 RchiOBHm_Chr4g0431191 RchiOBHm_Chr4g0445391 RchiOBHm_Chr6g0298561
rosa_laevigata	RLG00000011504 RLG00000023837
rosa_multiflora	Rmu_co7984268.1_g000001 Rmu_co8384817.1_g000001 Rmu_sc0004500.1_g000010
rosa_roxburghii	Rroxscaffold_2G00152110 Rroxscaffold_7G00169540
rosa_rugosa	Rorug01G0488600 Rorug04G0248900 Rorug04G0249000 Rorug06G0281000
rosa_samantha	Rh2BG043100 Rh2BG095700 Rh2CG044600 Rh2CG097600 Rh2DG043400 Rh4AG305000 Rh4CG328700 Rh6AG392400 Rh6BG400300 Rh6CG406200 Rh6DG392900
rosa_wichuraiana	Rw2G003870 Rw6G034310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	759
AccB7I	CCANNNNNTGG	2 cut(s)	307, 399
AccBSI	CCGCTC	1 cut(s)	353
AciI	CCGC	3 cut(s)	351, 636, 716
AcsI	RAATTY	1 cut(s)	478
AfiI	CCNNNNNNNGG	3 cut(s)	307, 399, 831
AflIII	ACRYGT	1 cut(s)	469
AgsI	TTSAA	3 cut(s)	291, 795, 820
AjnI	CCWGG	1 cut(s)	246
AluBI	AGCT	4 cut(s)	153, 294, 304, 542
AluI	AGCT	4 cut(s)	153, 294, 304, 542
Alw21I	GWGCWC	1 cut(s)	92
Alw26I	GTCTC	1 cut(s)	305
AlwNI	CAGNNNCTG	2 cut(s)	497, 545
AoxI	GGCC	2 cut(s)	140, 249
ApeKI	GCWGC	4 cut(s)	102, 464, 539, 704
ApoI	RAATTY	1 cut(s)	478
AspLEI	GCGC	1 cut(s)	77
AspS9I	GGNCC	2 cut(s)	140, 297
AsuHPI	GGTGA	4 cut(s)	148, 290, 752, 779
AvaII	GGWCC	1 cut(s)	297
BbsI	GAAGAC	1 cut(s)	32
Bbv12I	GWGCWC	1 cut(s)	92
BbvI	GCAGC	4 cut(s)	89, 476, 551, 691
BccI	CCATC	2 cut(s)	633, 856
BciT130I	CCWGG	1 cut(s)	248
BcoDI	GTCTC	1 cut(s)	305
BfaI	CTAG	1 cut(s)	693
BfmI	CTRYAG	3 cut(s)	103, 255, 462
BisI	GCNGC	5 cut(s)	103, 465, 540, 705, 716
BlsI	GCNGC	5 cut(s)	104, 466, 541, 706, 717
Bme1390I	CCNGG	1 cut(s)	248
Bme18I	GGWCC	1 cut(s)	297
BmgT120I	GGNCC	2 cut(s)	140, 297
BmiI	GGNNCC	3 cut(s)	141, 299, 753
BmrFI	CCNGG	1 cut(s)	248
BmsI	GCATC	3 cut(s)	418, 445, 679
BpiI	GAAGAC	1 cut(s)	32
BpmI	CTGGAG	1 cut(s)	417
BpuEI	CTTGAG	1 cut(s)	682
BsaI	GGTCTC	1 cut(s)	305
BsaJI	CCNNGG	1 cut(s)	730
Bsc4I	CCNNNNNNNGG	3 cut(s)	307, 399, 831
Bse1I	ACTGG	1 cut(s)	802
BseBI	CCWGG	1 cut(s)	248
BseDI	CCNNGG	1 cut(s)	730
BseGI	GGATG	3 cut(s)	460, 644, 871
BseLI	CCNNNNNNNGG	3 cut(s)	307, 399, 831
BseMII	CTCAG	1 cut(s)	605
BseNI	ACTGG	1 cut(s)	802
BseXI	GCAGC	4 cut(s)	89, 476, 551, 691
BseYI	CCCAGC	1 cut(s)	300
BsgI	GTGCAG	2 cut(s)	558, 639
BshFI	GGCC	2 cut(s)	142, 251
BsiHKAI	GWGCWC	1 cut(s)	92
BslFI	GGGAC	1 cut(s)	283
BslI	CCNNNNNNNGG	3 cut(s)	307, 399, 831
BsmAI	GTCTC	1 cut(s)	305
BsmFI	GGGAC	1 cut(s)	283
BsmI	GAATGC	1 cut(s)	815
BsnI	GGCC	2 cut(s)	142, 251
Bso31I	GGTCTC	1 cut(s)	305
Bsp1286I	GDGCHC	1 cut(s)	92
Bsp143I	GATC	1 cut(s)	82
Bsp19I	CCATGG	1 cut(s)	730
BspACI	CCGC	3 cut(s)	351, 636, 716
BspANI	GGCC	2 cut(s)	142, 251
BspCNI	CTCAG	1 cut(s)	606
BspLI	GGNNCC	3 cut(s)	141, 299, 753
BspMAI	CTGCAG	2 cut(s)	107, 466
BspTNI	GGTCTC	1 cut(s)	305
BsrBI	CCGCTC	1 cut(s)	353
BsrI	ACTGG	1 cut(s)	802
BssECI	CCNNGG	1 cut(s)	730
BssMI	GATC	1 cut(s)	82
BssT1I	CCWWGG	1 cut(s)	730
Bst2UI	CCWGG	1 cut(s)	248
Bst4CI	ACNGT	3 cut(s)	190, 256, 850
Bst6I	CTCTTC	3 cut(s)	166, 327, 852
BstAPI	GCANNNNNTGC	2 cut(s)	473, 545
BstC8I	GCNNGC	2 cut(s)	73, 702
BstDEI	CTNAG	3 cut(s)	575, 614, 632
BstDSI	CCRYGG	1 cut(s)	730
BstF5I	GGATG	3 cut(s)	460, 644, 871
BstHHI	GCGC	1 cut(s)	77
BstKTI	GATC	1 cut(s)	85
BstMAI	GTCTC	1 cut(s)	305
BstMBI	GATC	1 cut(s)	82
BstMWI	GCNNNNNNNGC	4 cut(s)	464, 473, 545, 821
BstNI	CCWGG	1 cut(s)	248
BstNSI	RCATGY	3 cut(s)	45, 75, 473
BstSCI	CCNGG	1 cut(s)	246
BstSFI	CTRYAG	3 cut(s)	103, 255, 462
BstV1I	GCAGC	4 cut(s)	89, 476, 551, 691
BstV2I	GAAGAC	1 cut(s)	32
BsuRI	GGCC	2 cut(s)	142, 251
BtgI	CCRYGG	1 cut(s)	730
BtsCI	GGATG	3 cut(s)	460, 644, 871
BtsI	GCAGTG	1 cut(s)	393
BtsIMutI	CAGTG	2 cut(s)	252, 393
Cac8I	GCNNGC	2 cut(s)	73, 702
CaiI	CAGNNNCTG	2 cut(s)	497, 545
CfoI	GCGC	1 cut(s)	77
Cfr13I	GGNCC	2 cut(s)	140, 297
CviAII	CATG	7 cut(s)	42, 72, 269, 470, 606, 648, 731
DdeI	CTNAG	3 cut(s)	575, 614, 632
DpnI	GATC	1 cut(s)	84
DpnII	GATC	1 cut(s)	82
Eam1104I	CTCTTC	3 cut(s)	166, 327, 852
EarI	CTCTTC	3 cut(s)	166, 327, 852
Eco130I	CCWWGG	1 cut(s)	730
Eco31I	GGTCTC	1 cut(s)	305
Eco47I	GGWCC	1 cut(s)	297
EcoO109I	RGGNCCY	1 cut(s)	140
EcoRII	CCWGG	1 cut(s)	246
EcoT14I	CCWWGG	1 cut(s)	730
ErhI	CCWWGG	1 cut(s)	730
FaeI	CATG	7 cut(s)	45, 75, 272, 473, 609, 651, 734
FaqI	GGGAC	1 cut(s)	283
FatI	CATG	7 cut(s)	41, 71, 268, 469, 605, 647, 730
Fnu4HI	GCNGC	5 cut(s)	103, 465, 540, 705, 716
FokI	GGATG	3 cut(s)	467, 651, 878
Fsp4HI	GCNGC	5 cut(s)	103, 465, 540, 705, 716
FspBI	CTAG	1 cut(s)	693
GlaI	GCGC	1 cut(s)	76
GluI	GCNGC	5 cut(s)	103, 465, 540, 705, 716
GsaI	CCCAGC	1 cut(s)	304
GsuI	CTGGAG	1 cut(s)	417
HaeIII	GGCC	2 cut(s)	142, 251
HhaI	GCGC	1 cut(s)	77
Hin1II	CATG	7 cut(s)	45, 75, 272, 473, 609, 651, 734
Hin6I	GCGC	1 cut(s)	75
HinP1I	GCGC	1 cut(s)	75
HphI	GGTGA	4 cut(s)	148, 290, 752, 779
Hpy188I	TCNGA	5 cut(s)	230, 424, 615, 629, 807
Hpy188III	TCNNGA	2 cut(s)	434, 854
HpyAV	CCTTC	3 cut(s)	189, 399, 440
HpyCH4III	ACNGT	3 cut(s)	190, 256, 850
HpyCH4V	TGCA	8 cut(s)	45, 71, 105, 464, 476, 539, 609, 620
HpyF10VI	GCNNNNNNNGC	4 cut(s)	464, 473, 545, 821
HpyF3I	CTNAG	3 cut(s)	575, 614, 632
Hsp92II	CATG	7 cut(s)	45, 75, 272, 473, 609, 651, 734
HspAI	GCGC	1 cut(s)	75
Kzo9I	GATC	1 cut(s)	82
LmnI	GCTCC	2 cut(s)	358, 436
LpnPI	CCDG	9 cut(s)	162, 233, 260, 280, 314, 447, 510, 767, 783
Lsp1109I	GCAGC	4 cut(s)	89, 476, 551, 691
LweI	GCATC	3 cut(s)	418, 445, 679
MaeI	CTAG	1 cut(s)	693
MalI	GATC	1 cut(s)	84
MbiI	CCGCTC	1 cut(s)	353
MboI	GATC	1 cut(s)	82
MboII	GAAGA	9 cut(s)	37, 153, 225, 314, 437, 689, 768, 869, 906
MhlI	GDGCHC	1 cut(s)	92
MluCI	AATT	4 cut(s)	30, 366, 478, 893
MmeI	TCCRAC	4 cut(s)	371, 391, 499, 607
MnlI	CCTC	7 cut(s)	169, 326, 330, 515, 690, 718, 898
MseI	TTAA	3 cut(s)	333, 369, 507
MslI	CAYNNNNRTG	1 cut(s)	604
MspR9I	CCNGG	1 cut(s)	248
Mva1269I	GAATGC	1 cut(s)	815
MvaI	CCWGG	1 cut(s)	248
MwoI	GCNNNNNNNGC	4 cut(s)	464, 473, 545, 821
NcoI	CCATGG	1 cut(s)	730
NdeII	GATC	1 cut(s)	82
NlaIII	CATG	7 cut(s)	45, 75, 272, 473, 609, 651, 734
NlaIV	GGNNCC	3 cut(s)	141, 299, 753
NspI	RCATGY	3 cut(s)	45, 75, 473
PaeI	GCATGC	1 cut(s)	75
PciI	ACATGT	1 cut(s)	469
PctI	GAATGC	1 cut(s)	815
PflMI	CCANNNNNTGG	2 cut(s)	307, 399
PkrI	GCNGC	5 cut(s)	104, 466, 541, 706, 717
PscI	ACATGT	1 cut(s)	469
PsiI	TTATAA	1 cut(s)	759
Psp6I	CCWGG	1 cut(s)	246
PspFI	CCCAGC	1 cut(s)	300
PspGI	CCWGG	1 cut(s)	246
PspN4I	GGNNCC	3 cut(s)	141, 299, 753
PspPI	GGNCC	2 cut(s)	140, 297
PstI	CTGCAG	2 cut(s)	107, 466
PstNI	CAGNNNCTG	2 cut(s)	497, 545
RseI	CAYNNNNRTG	1 cut(s)	604
SaqAI	TTAA	3 cut(s)	333, 369, 507
SatI	GCNGC	5 cut(s)	103, 465, 540, 705, 716
Sau3AI	GATC	1 cut(s)	82
Sau96I	GGNCC	2 cut(s)	140, 297
ScrFI	CCNGG	1 cut(s)	248
SduI	GDGCHC	1 cut(s)	92
SfaNI	GCATC	3 cut(s)	418, 445, 679
SfcI	CTRYAG	3 cut(s)	103, 255, 462
SinI	GGWCC	1 cut(s)	297
SmiMI	CAYNNNNRTG	1 cut(s)	604
SmlI	CTYRAG	2 cut(s)	661, 902
SmoI	CTYRAG	2 cut(s)	661, 902
SphI	GCATGC	1 cut(s)	75
Sse9I	AATT	4 cut(s)	30, 366, 478, 893
SsiI	CCGC	3 cut(s)	351, 636, 716
SspI	AATATT	1 cut(s)	331
SspMI	CTAG	1 cut(s)	693
StyD4I	CCNGG	1 cut(s)	246
StyI	CCWWGG	1 cut(s)	730
TaaI	ACNGT	3 cut(s)	190, 256, 850
TaqI	TCGA	1 cut(s)	96
TasI	AATT	4 cut(s)	30, 366, 478, 893
TauI	GCSGC	1 cut(s)	718
Tru1I	TTAA	3 cut(s)	333, 369, 507
Tru9I	TTAA	3 cut(s)	333, 369, 507
TscAI	CASTG	2 cut(s)	259, 400
TseI	GCWGC	4 cut(s)	102, 464, 539, 704
TspDTI	ATGAA	3 cut(s)	153, 882, 906
TspRI	CASTG	2 cut(s)	259, 400
Van91I	CCANNNNNTGG	2 cut(s)	307, 399
VpaK11BI	GGWCC	1 cut(s)	297
XapI	RAATTY	1 cut(s)	478
XceI	RCATGY	3 cut(s)	45, 75, 473
XcmI	CCANNNNNNNNNTGG	1 cut(s)	333
XspI	CTAG	1 cut(s)	693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.